LOCUS       DASPUS010000001         3304 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_823584, whole genome shotgun sequence.
ACCESSION   DASPUS010000001 DASPUS010000000
VERSION     DASPUS010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3304)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3304
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_823584"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..605)
                     /locus_tag="VEJ68_00005"
     CDS             complement(<1..605)
                     /locus_tag="VEJ68_00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HXX05185.1"
                     /translation="MAKNAPLPPAPVLMTCFGHCGIGLGAESYRRLLIDVGADPLKPT
                     LKGEKEESRVLKRYGSTILRFPNSYGGSEIPLIPRALLIDLDPRAANLILQSYPDLFA
                     LRDKHVISGAGGAARNWAEGRSRFIKEVTVKYDMQKQLAGLSPEPVRGFTVPFAMGGG
                     TGSSFASAFMQYIKKDTKEHATIASFGLLPEFGWDPIIFEAA"
     gene            complement(777..1085)
                     /locus_tag="VEJ68_00010"
     CDS             complement(777..1085)
                     /locus_tag="VEJ68_00010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05186.1"
                     /translation="MSDEILRTVKNMLASGKGDVKRLREIMDTIKEGEPVLMSDYKYV
                     ESLTSQEAESQLKEKSDVSRPQTRYVRDESLEILRIRLAEGHITIDEFRELKKALTDE
                     "
     gene            complement(1086..1901)
                     /locus_tag="VEJ68_00015"
     CDS             complement(1086..1901)
                     /locus_tag="VEJ68_00015"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HXX05187.1"
                     /translation="MASSTEIESKKMITEGLSYAKLGKHKEAISFFDKVLKNDARNME
                     ALYQKGLALISLSKNKEAMLCFEKILEKDPNHIAALNNLGNSYSEMQQFERATGFYDK
                     ALKLDPNYTPALYNKGLAQVRIGKYDDALVYLNRVLNVEPENVSALYYKGLVLGKLKK
                     HEDAISCFDKVLEKDLENFEAVFYKATELAELKKHGDALLLFDKILKKHPKNGTVIYA
                     KARSKAEMGDNNDALVLLAQAISYYGKTIKGWAVKDPSFDRLKEDLKFKMIVK"
     gene            complement(1942..3222)
                     /locus_tag="VEJ68_00020"
     CDS             complement(1942..3222)
                     /locus_tag="VEJ68_00020"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HXX05188.1"
                     /translation="MVDLSLSHLLRTEWVIPIFLGMIFLASLLARKINIPYTMVLVGI
                     GIAISVSHVSGFGPIDVSQFKVDPTLILYFIVPPLIYEAMMRIDREQFKTIRISSLLL
                     ATVGVALATVVGGLLLSYVAGLPTIVAFAFAALIAPTDAAIVIEVFKKVKVPSTLTVL
                     MQSEASFNDATGVVIFSSIMAIALAQGSVLEPSGTIGQINVNILEQIGHFAIVFFGGI
                     AVGLGFAVGARFLIKLMDEPFAETALSVAVLFGSVVVANALQLSGLVAAAASGLYFGN
                     LVMKGKGIMSERTLMYSSHFWEMIAFFANSVAFLYLGLSMDILNMGPKLPLIAMAFVA
                     VLAARAASTYPILAATHRITHEKWPTTWRNVVMIGGMRGALSVALVATLPESDFKEVL
                     KTITFGVVLASLIVQYPILTRYIKKSFPETTIQQ"
BASE COUNT          941 a          684 c          606 g         1073 t
ORIGIN      
        1 gccgcctcaa agattattgg gtcccatcca aattctggca aaagtccaaa tgatgctatt
       61 gttgcatgtt cttttgtatc ctttttgata tattgcatga aggcgctggc aaaggaactt
      121 cctgtgccac ctcccattgc aaatggaact gtgaaacctc ttacaggctc tggcgataat
      181 ccagctaact gcttttgcat atcgtacttt acagtgactt ctttgatgaa tctgctgcga
      241 ccctctgccc agtttcttgc ggcacctcct gcgccagaga ttacatgttt gtcacggaga
      301 gcaaataggt ctggatagga ttgtagaatt aggtttgcgg cccttggatc taaatcgatc
      361 aataaagctc ttggaattag tggaatctcg cttcctccgt atgaatttgg aaatctcaat
      421 atcgtactac catacctttt gagtacgcgt gattcttctt tttcaccctt gagtgttggt
      481 ttgagtggat cagctccaac atcaatcaat aatcttctat atgattctgc tccaagtcct
      541 attccgcaat gaccaaaaca tgtcattaga acaggtgctg gaggtaacgg cgcattcttt
      601 gccaaactaa tcactatatt gacgggaacc tcgtctcttt aaccaaggag ttcaagattg
      661 taaagtctgt acttgattgt tctagacatg aaataatgga aattgggcct aattgtatca
      721 tttaatatca aagggtacca ttttgaattt aagatttaag agtaaatcat acttttctac
      781 tcatcagtta atgctttttt tagctctctg aattcatcaa ttgttatatg accttctgca
      841 agtctgattc tgaggatctc aagagattca tctctaacat atcgtgtttg tggtcttgat
      901 acatctgatt tttcttttaa ttgtgattct gcttcttgag aagtaagact ctcaacatat
      961 ttgtaatctg acataagaac tggctctcct tcctttatcg tgtccattat ttcgcgtagt
     1021 ctttttacat ctcccttacc ggaagctaac atattcttta cagttcttag gatctcgtct
     1081 gacatttatt tcactatcat cttgaatttt agatcctctt ttagtctatc gaaagaagga
     1141 tcttttacag cccatccttt aatcgtttta ccataatacg atatcgcttg tgcaagcaat
     1201 acaagtgcgt cattgttgtc acccatctct gccttactcc gtgcctttgc ataaattact
     1261 gtaccatttt ttggatgctt ctttaggatt ttatcaaaaa gtagtagagc gtcaccatgt
     1321 ttttttagct ccgcaagttc agtggccttg taaaatactg cctcaaaatt ttctaggtct
     1381 ttttctagaa ctttatcaaa gcagctgatt gcatcctcat gtttctttag cttgcccaat
     1441 acgagtcctt tgtagtacaa cgcagaaaca ttttctggtt caacattaag tactcgatta
     1501 agataaacaa gtgcatcatc gtatttgcca atccttactt gtgctaagcc tttgttgtat
     1561 aatgcgggtg tgtaattggg atcaagtttt aatgctttat cataaaatcc tgtggctctt
     1621 tcaaactgtt gcatctcaga ataggaattg cccaaattgt tcaatgcggc aatgtgattt
     1681 ggatcttttt caagaatttt ttcaaagcac agcattgctt ctttattttt actcaaactt
     1741 attaatgcca aacccttttg gtatagtgct tccatattac gagcatcatt cttgagtact
     1801 ttatcaaaga aagaaatggc ctccttatgt tttccgagtt ttgcatatga caagccttct
     1861 gtaatcattt tcttagattc aatttctgtc gatgaagcca atttactgtt acaataaaca
     1921 agtactgata tattatttgg tttattgttg aattgtagtt tctggaaaag attttttgat
     1981 gtaccttgtg aggatcggat attgtactat taatgatgca agcactactc caaacgttat
     2041 cgtctttagt acctccttga agtcactttc aggaagggta gctaccaatg caacagaaag
     2101 tgcccctctc atacctccta tcattactac atttctccag gtagtcggcc atttttcatg
     2161 tgttatcctg tgggttgctg cgaggattgg ataggtggat gctgctcttg cagccaaaac
     2221 cgctacaaat gccatagcaa ttaacggtaa ttttggaccc atgtttaaga tgtccatact
     2281 taatcccagg tataagaaag ccaccgaatt tgcaaaaaac gcgatcatct cccaaaaatg
     2341 tgaactgtac atcaatgtcc tttcactcat gatgcccttt cctttcataa ctaaattgcc
     2401 aaagtatagt cctgaggcag ctgccgcaac aagaccagaa agttgtaagg catttgcaac
     2461 aactactgaa ccaaacaaga cagctacgga aagggcagtc tctgcgaatg gttcatccat
     2521 aagcttgatg agaaatctgg ccccaactgc aaatccaaga ccaacggcaa ttccgccaaa
     2581 aaatacaatg gcaaagtgac ctatctgttc caaaatgttg acatttatct ggccaattgt
     2641 tcctgacggt tctaaaactg aaccctgtgc taatgctatt gccataatag aagaaaatat
     2701 gacaacaccg gtggcatcat tgaagctagc ttcagactgc ataagcactg tcaaggttga
     2761 gggtactttg actttcttga atacttcaat tacgattgca gcatcggtag gggcaattaa
     2821 tgccgcaaaa gcaaaagcaa caatagttgg taatcctgca acataagaaa gcaataatcc
     2881 tccaaccaca gtggcaagag ctactccgac ggtggcaagc aataaggatg atattcggat
     2941 tgttttgaat tgctcacgat cgattctcat catagcttca tagattagag gtggaactat
     3001 gaaatacaga attaaagttg ggtctacctt gaattgagaa acatcaatag gaccaaatcc
     3061 ggaaacgtga gagactgata ttgctatgcc tatcccaact agaaccatgg tatagggaat
     3121 gtttattttt ctggcaagta atgaagcaag aaatatcatg ccaagaaaaa ttggaatgac
     3181 ccactcggtt cttagcaagt ggcttagact caggtctacc atctatacca ttcatgttct
     3241 aacttataaa aatggttcca aaagaatggg actcctctgc aaaaagttgt tttttccgtg
     3301 ggtt
//
LOCUS       DASPUS010000002         2748 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1097738, whole genome shotgun sequence.
ACCESSION   DASPUS010000002 DASPUS010000000
VERSION     DASPUS010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2748)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2748
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1097738"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..380)
                     /locus_tag="VEJ68_00025"
     CDS             complement(<1..380)
                     /locus_tag="VEJ68_00025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HXX05189.1"
                     /translation="MNTKILTSNRKMLAMILGVAVIATIGGSFAFAQTASSSSSSSSS
                     AGSTSGTALPQIQGSVNLQQLLLSNIQTKFTDAANTAAGAVTNGQVIGGNLGVIQGSV
                     VYNFKVIDGTNIYSVIVDAGNGKV"
     gene            complement(535..1059)
                     /locus_tag="VEJ68_00030"
     CDS             complement(535..1059)
                     /locus_tag="VEJ68_00030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05190.1"
                     /translation="MSSPDENVGGEPKENKESKEAKENLFKIVDDIVAHTNRSRRLFM
                     IFIASALIFGPVALGLGGVLLGHPTYNIRHLEAGNEENSTNMPQSGMHLQLVSANGTV
                     IQEMPVQQMPPMHSPRAGFIFLELNIFIIISIVFGGILLFIAIKEYRFFAKWNKRFAK
                     FKSMQDKIDKELED"
     gene            complement(1098..1403)
                     /locus_tag="VEJ68_00035"
     CDS             complement(1098..1403)
                     /locus_tag="VEJ68_00035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HXX05191.1"
                     /translation="MSHEYRDRIYIRKDIILKLSEHGELNQTNLLSYCGLNLMKHKDI
                     LESLERKGFIKKTETPWGNKKVIKYSVTEKGRKFCEMVLEPYEEIFPRSEKRDQEQS"
     gene            1782..2564
                     /locus_tag="VEJ68_00040"
     CDS             1782..2564
                     /locus_tag="VEJ68_00040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HXX05192.1"
                     /translation="MKMMGIFSRNNADIKNNETKMENKTTEINNNSNGTALKVESLSK
                     IYDSAAGRVVALANVNFTIKKGEFVSIVGPSGSGKSTLLNMIGALDRPTTGKVYINGI
                     NIFSLSDSQIATMRNTLIGFVFQSFNLINRTTVQKNVKLPSTIAGMSHSDANERTQKI
                     LEALGIADKATQKPINLSGGQQQRVAIARALVNNPTIILADEPTGNLDTKTGDDVFDM
                     LKSLSHKFRRTIIMVTHNPELAKSTDRSILIRDGRIDTDVVN"
     gene            2554..>2748
                     /locus_tag="VEJ68_00045"
     CDS             2554..>2748
                     /locus_tag="VEJ68_00045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05193.1"
                     /translation="MSINLPKNLNVIFGKNVLPKIAPVFLIALFFIPMLNVPSSAQVM
                     QENDCAPPLTTTIDANYQGPV"
BASE COUNT          879 a          512 c          471 g          886 t
ORIGIN      
        1 aacactttgc cgttgccagc atctacaatt acagaataga tgtttgtacc atctattacc
       61 ttgaagttgt agacaacaga accttggatc acgcccaagt ttccgccaat tacctgacca
      121 ttagtcacag cacctgctgc agtatttgca gcatcagtga attttgtctg aatattagac
      181 aaaagtagct gttgcaggtt gacagaacct tgtatttggg gtagcgcggt tcccgaagtt
      241 gagccagcac ttgaactaga actagaacta gaactagcag tttgtgcaaa tgcaaatgat
      301 cctcctattg tagcaattac agctacacct agaatcattg caagcatctt tcgattgctg
      361 gttagaattt ttgtattcat tctgccatgt atacaacgat gaatatataa aaaattgcgt
      421 cacattgttc aggaacattg ttaactatgc ataggcaggg ccataatgat gacacaataa
      481 atacgctgtc ataatcagga attacaaaca atttgctata atcaaaatac gctgctaatc
      541 ttctaattct ttgtctattt tgtcctgcat tgatttgaat tttgcaaatc tcttattcca
      601 tttggcaaag aagcgatatt cctttattgc aataaacagc agtattcctc caaacacaat
      661 ggaaattatg atgaaaatgt ttagctctaa aaatatgaat cctgctcgtg gggaatgcat
      721 tggtggcatt tgctgaacgg gcatctcttg aatgacagtg ccatttgctg aaactaattg
      781 taagtgcatt ccagattgtg gcatatttgt agaattttct tcattacctg cttctaaatg
      841 tctaatatta taagtaggat gtccgagaag aacaccgccc aaaccgagag caactggtcc
      901 aaaaatgagt gcagatgcaa taaaaatcat gaatagacgt cttgatctat tggtatgtgc
      961 aacaatatca tctactatct taaacagatt ttctttagct tccttgctct ctttgttctc
     1021 ttttggttcc ccacctacat tttcatccgg actagacaat tagatcaata ctcctatact
     1081 ccgaataaaa tgcttcgcta actttgttct tgatctctct tttcactcct tggaaaaatt
     1141 tcttcatatg gctctaagac catctcgcaa aactttcttc ctttctcagt aacagaatat
     1201 tttatcactt ttttattacc ccatggtgtc tctgtttttt ttatgaatcc ttttcgttcc
     1261 aaactttcaa gaatgtcttt atgcttcatt aaatttagac cacaatagct tagcagattc
     1321 gtttggttaa gctcgccatg ctcagatagt ttcaaaataa tatcttttct tatgtaaatt
     1381 ctgtcacggt attcatgcga caagtatctc gtcttcttgg aaacaatttt ctgtattaag
     1441 cttttacata tgatttaaaa taattgagac ataatttctt ccgtctttca ctaacaatgt
     1501 tcctgaacaa agtttgacaa ttatttaatt gtgctaggtt gattgagatt agtgtgggca
     1561 tggttttaga ttctacccaa gagacaatga gagttactcg caaccccagc gatcacagtg
     1621 catactttgg tagaggtgcc cacacacgtt ctacttccaa tgtgttgaaa tctgttactt
     1681 taattaaatt gatgtatgga tgttatatga ttcaatcttg tgttattttt atcaattcaa
     1741 agaattttat cgaatcaaat aattgtgcca agggaagata aatgaaaatg atggggattt
     1801 ttagcagaaa taatgcagat attaaaaaca acgaaacaaa gatggaaaat aaaactactg
     1861 aaatcaataa taattcaaac ggaactgcac ttaaagttga aagtctttca aaaatatatg
     1921 attcagctgc aggaagagtt gtggctttag ccaacgttaa ttttacaata aagaaaggcg
     1981 aatttgtttc catagtagga ccatcaggaa gtggtaaatc tacattgctt aacatgattg
     2041 gtgcattaga cagacctact actggtaagg tctacataaa cggaattaac atattctctc
     2101 tttccgattc tcagattgca acaatgagaa atactttaat cggttttgtg tttcagtcat
     2161 ttaatttaat taatagaacc acagttcaaa aaaatgtaaa attaccctct acaatagctg
     2221 gaatgtcaca ctctgacgca aatgaacgga cgcaaaaaat tcttgaagct ttgggaatag
     2281 cagacaaggc aactcaaaaa ccaattaatc taagtggtgg tcagcaacaa agagttgcaa
     2341 ttgcacgagc tcttgtaaat aatccaacaa taattttagc tgatgagcca actggtaacc
     2401 ttgataccaa gactggagac gatgtttttg atatgttgaa atcactttca cacaaattca
     2461 gacgaactat tatcatggtc actcataatc cagagcttgc gaaatctaca gatagatcga
     2521 tcttgataag agatgggagg atagatacag atgttgtcaa ttaatctccc aaaaaacctc
     2581 aatgtgattt ttggaaagaa tgttcttcca aagatagcac cagtgttttt aattgcgttg
     2641 ttttttattc caatgcttaa tgtgccgtca tcagctcagg taatgcaaga aaatgactgt
     2701 gctccgccac ttactacaac catagatgca aattatcaag gacctgtg
//
LOCUS       DASPUS010000003         3208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1920514, whole genome shotgun sequence.
ACCESSION   DASPUS010000003 DASPUS010000000
VERSION     DASPUS010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3208)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3208
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1920514"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..196
                     /locus_tag="VEJ68_00050"
     CDS             <1..196
                     /locus_tag="VEJ68_00050"
                     /inference="COORDINATES: protein motif:HMM:NF037139.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05194.1"
                     /translation="TEGFSGAEIEGVCNRAAMSAIRRYVNKGEKSVKSILVTREDFEN
                     AIEKIRPSKIKQSAMPSQLI"
     gene            215..1276
                     /gene="amrS"
                     /locus_tag="VEJ68_00055"
     CDS             215..1276
                     /gene="amrS"
                     /locus_tag="VEJ68_00055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AmmeMemoRadiSam system radical SAM enzyme"
                     /protein_id="HXX05195.1"
                     /translation="MTAKEAVLYQKLPNEKVRCTACARYCEIGKDQIGLCGVRANNKG
                     NLELLVYGKVITGHVDPIEKKPVTHYKPGTSIFSIATTGCNWLCKYCQNYDISQRRKV
                     EGRDMTPKEVVEMAKNSGSDGIAYTYNQPSIFMEFARDCGVLARKNGLFNIFVSNGYD
                     TPESVKMMDEFLDCITVDFKGNGEPQFTRRYIGVPDPQPIFDTLKEIRDKTKIHVEIT
                     DLVVPGVGDNLEYATKLCKFVYNEFGPDMPIHFLRFHPDYKMMEFESTPIKTLEKHHE
                     IAKKEGLNYAYLGNVPGHPLEHTYCPQCKNIVIKRYGFDIQGWHMDENNHCKFCGNKI
                     AIIGKLAENYKQNRFQFIC"
     gene            complement(1273..1914)
                     /locus_tag="VEJ68_00060"
     CDS             complement(1273..1914)
                     /locus_tag="VEJ68_00060"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010189456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HXX05196.1"
                     /translation="MDPIDLTLEISNMLPSFPGSPSPQFISWADKKSDGYNLELIFLS
                     SHTGTHLDAPYHFVERGVGIDKIPLSKLIINAVICRVKKRPNESITQRDIVDFETRNG
                     TINPNMAVVFETGWSKNLAKKDYFTKNPGLSSSAARYLLKKKISLVGVDSPSIDMGKD
                     SKFLVHHILLKGGILILENLCNLDKIPKSRFRLIVLPLKLKDATGSPVRAVAI"
     gene            1993..2250
                     /locus_tag="VEJ68_00065"
     CDS             1993..2250
                     /locus_tag="VEJ68_00065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HXX05197.1"
                     /translation="MPTTYILINSDLGSDLEIIKKIKDILNKEGSVKYEVQGVYGVYD
                     IIIKITADSMERLRSIITDKIRKIDKVYSTLTMMVIEEQEK"
     gene            complement(2251..>3208)
                     /locus_tag="VEJ68_00070"
     CDS             complement(2251..>3208)
                     /locus_tag="VEJ68_00070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014966037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HXX05198.1"
                     /translation="KGIAQLIKCKPEEVIFTQSVTDGINFVSNGFKFKPKANFIIRGS
                     NHEHPANHFPWIRTSQRSELRNLSVDENGHFDLNSLKKLIDDNTQLVVLSHALFNTGV
                     ILPVEEIGNILSQKNISYFIDAAQTVGCISDVDINKIKCDFMSFNGSKWLCGPMGMGV
                     FFCKRDSSELLDPLQVGGECAIFHEDKIVYKEMPAKFQAGFRNWVGVAGLEASVNYLL
                     KVGIERIRQKNIRLASLMREELSKMDGITLFGPQEQERRTSIVSFSIKNLDSGTIVKK
                     LESKNMILAVREIFSKKIIRASPHFFNTESEILQVIDAIKQN"
BASE COUNT         1059 a          555 c          595 g          999 t
ORIGIN      
        1 tactgaagga tttagcggtg ccgaaattga aggtgtatgt aatagagctg caatgagcgc
       61 aatacgaaga tatgtcaaca aaggtgaaaa atcagtgaaa tcgatattgg taactaggga
      121 agactttgaa aatgcaatag agaagattcg accatctaag ataaaacaat ctgcaatgcc
      181 atcacaactt atatgataaa ttgagtaatg gccaatgacg gcaaaagaag cagttctcta
      241 tcaaaaatta cctaatgaaa aggttaggtg tacagcttgt gctagatatt gtgaaatagg
      301 aaaagatcag atcggtttat gcggtgttag ggccaataac aaaggcaacc ttgagttatt
      361 ggtttatggt aaagtaatta caggtcatgt tgatcctatt gagaaaaaac cagtaacgca
      421 ctacaaacca ggtaccagta tattttcaat agctacaaca ggctgcaact ggctttgcaa
      481 atattgccaa aattatgata tcagccaaag aagaaaggtg gaaggaagag acatgacacc
      541 taaagaagtg gtggagatgg caaagaattc tggctccgac ggtattgcat acacgtataa
      601 tcaaccttca atattcatgg agttcgcacg tgattgtggt gtacttgcta ggaagaacgg
      661 attattcaat atctttgttt caaacggtta cgacactccg gaatctgtaa agatgatgga
      721 tgaatttctt gattgcataa ctgtggactt caagggaaac ggcgaacctc aatttacacg
      781 aagatacatt ggagttccag atcctcaacc aatttttgat acactaaagg aaattcggga
      841 caagacaaag attcatgtag aaattactga tctggtagta cctggcgtgg gcgataattt
      901 ggagtatgcg actaaactct gcaagtttgt ttacaatgaa tttggacctg atatgccgat
      961 tcacttttta cgatttcacc ctgactacaa aatgatggaa tttgaatcaa ctcccattaa
     1021 gacattagaa aaacatcatg aaattgcaaa aaaagaaggt cttaactatg cctaccttgg
     1081 taacgttcct ggccacccgc ttgagcatac atattgtcca cagtgcaaga acatcgtaat
     1141 caagagatac gggtttgaca ttcaaggatg gcatatggat gaaaacaatc attgcaagtt
     1201 ttgtggcaat aagattgcaa taataggaaa acttgcagag aattataaac aaaacagatt
     1261 tcagttcatt tgctaaattg ctaccgctct tacaggagaa ccagtagcat cctttaattt
     1321 gagtggcaag acgatgagcc taaaacgaga ttttgggatt ttgtcaagat tacacaagtt
     1381 ttctaaaatt agtattccgc ccttcaataa aatatgatgt actagaaatt ttgaatcttt
     1441 acccatgtct atactgggag aatcaacacc taccaaactt atcttctttt ttagtaaata
     1501 tcttgctgcc gaagaagata atccgggatt ttttgtaaaa tagtcttttt ttgctaggtt
     1561 ttttgaccat ccggtttcaa aaacaacagc catgttagga tttattgttc catttcttgt
     1621 ctcaaaatct acaatatctc gttgagtgat tgattcatta ggacgttttt tgactctgca
     1681 tattacagca tttatgataa gcttactgag agggatcttg tctatgccga ctcctctttc
     1741 tacaaaatga tatggtgcat caagatgggt accagtatgt gagcttaaaa aaattaattc
     1801 taaattatat ccatcagatt ttttatctgc ccatgaaatg aattgtggac taggagatcc
     1861 aggaaaactt ggaagcatat ttgaaatttc aagtgtaaga tctattggat ccacaaaaat
     1921 gattagaatt ggtgataaat caattttgat gttttaatca aaggttaaat attgtgcaac
     1981 tgaaaataac ttatgccgac cacttacatt ttaataaatt ctgatctggg ctctgacttg
     2041 gagataatta agaaaattaa agatattcta aataaagagg gttcagtcaa gtacgaagtc
     2101 caaggcgttt atggtgttta tgatattata atcaagatta ccgcagattc tatggaacgc
     2161 ttaagaagca taatcacaga taagatcaga aaaatagaca aggtctattc gaccttgact
     2221 atgatggtaa tagaagaaca agaaaagtaa ctagttttgt tttatcgcat caattacttg
     2281 taaaatttct gattctgtat tgaaaaaatg cggtgaggca cgaattatct tcttggaaaa
     2341 gatttccctt actgcaagta tcatgttttt actttccagt ttttttacta tcgtacctga
     2401 gtctagattc ttaatggaaa acgaaactat gcttgttctc ctttcttgtt cttggggacc
     2461 aaacaacgta attccatcca tctttgacaa ctcttcacgc ataagactag caagcctgat
     2521 atttttctgt ctaattcttt caattccaac tttgaggaga taattaaccg atgcctctaa
     2581 tcctgcaact ccgacccaat tacgaaatcc tgcttggaac ttggcaggca tttccttgta
     2641 aactatttta tcttcatgaa aaattgcaca ttctcctccg acttgaagtg ggtctaatag
     2701 ttcactcgaa tctcttttgc aaaaaaagac tcccatgccc atagggccac acaaccattt
     2761 tgagccatta aaagacatga agtcacattt tattttgttt atatccacgt cgctgatgca
     2821 tcctactgtc tgagctgcat ctatgaaata agaaatattt ttctgcgata aaatatttcc
     2881 tatctcttct actggtagga ttacacctgt attgaaaagg gcatggctca gaacaacaag
     2941 ctgtgtatta tcatcaatta atttttttag tgaatttaaa tcaaagtgac cgttttcatc
     3001 cacggacaaa tttcttaatt cagatcgttg actagtcctt atccagggaa agtgattagc
     3061 aggatgttcg tgatttgaac cacgaattat aaaattggct tttggtttga atttgaaacc
     3121 attagagaca aaatttattc catcagtaac actttgtgtg aatatcacct cttctggctt
     3181 gcatttaatt aattgagcaa ttcctttt
//
LOCUS       DASPUS010000004         2840 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1646367, whole genome shotgun sequence.
ACCESSION   DASPUS010000004 DASPUS010000000
VERSION     DASPUS010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2840)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2840
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1646367"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..357
                     /locus_tag="VEJ68_00075"
     CDS             <1..357
                     /locus_tag="VEJ68_00075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010194965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-demethylwyosine synthase TYW1"
                     /protein_id="HXX05199.1"
                     /translation="NTSLEIISNSDTRSVLRLTLIRGYNCSDELIPEYAKMIRDSGIH
                     FIEAKSYMHIGRSTNRLERSDMLEMSEVRHFASELARQSEIYSIMDESDISRIVVLQN
                     QNRIINRWITSYASTN"
     gene            complement(332..880)
                     /gene="rdgB"
                     /locus_tag="VEJ68_00080"
     CDS             complement(332..880)
                     /gene="rdgB"
                     /locus_tag="VEJ68_00080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HXX05200.1"
                     /translation="MSSSIFFASSNENKFKEAKNILSKFGIKLQFLKSHLEEIQSENI
                     EEIAQHKVNQAFSLCSRPVMIEDDGLFIRSLNGFPGPYSSFVFDTIGNNGILKLVTKD
                     RAAKFLSVIAYCEKQDDVMLFDASVSGMISKKTRGTKWGYDPIFIPEGETKTYSQLKQ
                     KNIVSHRYLALKKFANWYLHKK"
     gene            complement(870..1490)
                     /locus_tag="VEJ68_00085"
     CDS             complement(870..1490)
                     /locus_tag="VEJ68_00085"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KEOPS complex kinase/ATPase Bud32"
                     /protein_id="HXX05201.1"
                     /translation="MKLLKKGAEADIYLTKWDGIESILKIRKKKDYRNEILDSRIRTL
                     RTMREAKMISEVKSFGISTPLVYFVDQKKCEIYLQYIHGKLVRDLSDKMIIKTCKKIG
                     EIVGLLHKNGIMHGDLTTSNFIQASKKLVILDFGLSQWADKVEDHAIDLRLFKEVLNS
                     AHVHIVNEAWRSFLQGYGKIVGKTRKDKVISQVLVIEKRGRYANVV"
     gene            1603..1926
                     /locus_tag="VEJ68_00090"
     CDS             1603..1926
                     /locus_tag="VEJ68_00090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05202.1"
                     /translation="MEQDEKRIMQEDCSEDTLGAGILTLTNMRLAFDKTAGRIFDFSK
                     KFGETVIDAKLNQISEVSKEGWMIKKVRIKIKTDDGEKTYKFGVFNTGKWEKAVQDAI
                     SAYKS"
     gene            complement(1923..>2840)
                     /gene="kae1"
                     /locus_tag="VEJ68_00095"
     CDS             complement(1923..>2840)
                     /gene="kae1"
                     /locus_tag="VEJ68_00095"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061711 - N(6)-L-threonylcarbamoyladenine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KEOPS complex N(6)-L-threonylcarbamoyladenine
                     synthase Kae1"
                     /protein_id="HXX05203.1"
                     /translation="KSGKILSDVRKIYKPPEGEGIHPREASRHHAEHSPQVLSECLQK
                     ADLQVTDLDIISYAAGPGLGPCLRIGAVVARSLASYYDIPIYPVNHALGHIELGKMLT
                     GSKDPLVLLVSGGHTMILAFLGGKWRVFGETLDITLGQLLDQIGRFAGFASPCGSRIE
                     DLASQSSKYEPLPYVVKGNDVSFSGLLSATKRIIPKGIETACFSLQETAFSMVGEAVE
                     RALSFTGKKEFMVVGGVAANKRLSEILRSVCNRHKCKFFVAPKEYAGDCGSQISWVGL
                     LESSKKSGSKIEETFVKQSWRLDTVDVYY"
BASE COUNT          869 a          566 c          497 g          908 t
ORIGIN      
        1 aatactagtc ttgagataat ctcaaactct gatacaagat cagttctcag attaacactt
       61 atccgaggtt acaactgcag tgacgaattg attcccgagt atgcaaaaat gattagagat
      121 tcaggtatac actttattga agccaaatca tacatgcata ttggcagatc gaccaataga
      181 ctagaacgct ccgacatgtt ggaaatgtca gaggtcagac attttgcaag tgaactggca
      241 aggcaaagcg agatttattc gataatggat gaaagcgaca tttcaagaat agtagtatta
      301 caaaatcaga accgaattat caatcgctgg attacttctt atgcaagtac caattagcaa
      361 attttttcaa ggccagatat ctgtgtgaga caatattctt ctgctttagt tgtgagtatg
      421 tttttgtttc tccctctgga atgaatatag gatcataacc ccatttcgta ccgcgagttt
      481 ttttagatat cattccagag accgatgcat caaacaacat gacatcgtct tgtttttcac
      541 aatatgctat aacagataga aactttgcag ctctgtcctt tgtcaccaac ttgagaattc
      601 cattgttgcc tatggtatca aacacaaagg aagaatacgg ccctggaaat ccattcagtg
      661 atcttatgaa aagaccatcg tcttctatca ttacgggtct tgaacacaag gaaaaagctt
      721 gattgacctt gtgttgtgca atctcctcta tattttccga ttgtatttct tcaagatgag
      781 attttagaaa ttgcaacttt atgccaaatt ttgataaaat gttctttgct tccttaaact
      841 tgttttcatt tgatgaagca aaaaatatgc tagacgacat ttgcgtatct tcctcgtttt
      901 tctataacca atacctgtga gatgacttta tcttttcttg tttttcctac aatttttcca
      961 tagccttgaa gaaatgatct ccaagcctca tttactatat gcacatgtgc actgttcaac
     1021 acttctttga acaatcttag atcaattgca tggtcttcca ccttatcagc ccattgagac
     1081 aatccaaaat caagaattac tagttttttg cttgcctgaa taaagttaga ggttgttagg
     1141 tcgccatgca tgatcccatt cttatgaagg agacctacga tttctcctat ctttttacat
     1201 gtctttatta tcattttatc tgataaatcg cgcactagtt ttccatgtat gtattgaaga
     1261 taaatctcac attttttttg atcaacaaaa tagacaagtg gggtactgat tccaaacgat
     1321 tttacttctg agatcatttt tgcctccctc atggttctta atgttcgaat ccttgaatcg
     1381 aggatctcat ttctataatc tttcttcttt ctaattttta agatagattc tattccatcc
     1441 cattttgtaa gataaatgtc tgcttctgcg cctttcttta gtaacttcaa caagattttg
     1501 agtgttgcct gacataattt aagttacaat tccattcact gaagatgata tttcatctat
     1561 tttgaaaata cagttataac atccagcaag aagccagaac atatggaaca agacgagaaa
     1621 agaattatgc aagaagactg ctctgaagat accttgggag caggaatact tactcttact
     1681 aacatgagat tggcatttga caagacagca gggagaatat ttgatttctc aaaaaaattt
     1741 ggcgagacag taattgatgc aaagttaaac cagatatcag aagtctcaaa agaaggctgg
     1801 atgataaaaa aagttagaat caagattaaa actgatgatg gagaaaagac ctacaagttt
     1861 ggagtcttca acactggcaa gtgggaaaaa gcagtacaag atgccatttc tgcttacaag
     1921 agctagtagt aaacatctac tgtatccaac ctccaagatt gttttacaaa ggtctcttct
     1981 atcttagatc ctgatttttt tgatgattcc agtaacccta cccaagagat ctgcgaacca
     2041 caatctcctg catattcttt gggagcaaca aagaatttgc atttatgtct attacataca
     2101 ctacgaagga tctctgacag tctcttgtta gctgctacac cgccaactac catgaattcc
     2161 tttttgcctg tgaaagacaa tgctctttct actgcttctc ctaccataga aaatgcagtc
     2221 tcttgtaatg aaaaacatgc tgtctcgatg ccttttggaa ttattctctt ggttgcagaa
     2281 agaagacctg agaacgatac atcgtttcct ttaaccacat acggcaaggg ttcgtacttg
     2341 gatgactgtg atgcgagatc ttcaatccta gaaccgcatg gagaagcaaa tcctgcaaat
     2401 ctgcctatct gatccaagag ttgtcctaat gtaatatcaa gcgtttcacc aaagactcgc
     2461 cattttcctc ctaaaaatgc aagaatcata gtgtgtcctc ctgagacaag tagaacaagt
     2521 ggatcctttg atccagttag catcttgcca agttctatgt gtccaagagc gtggtttact
     2581 ggatatattg gaatgtcata atatgatgcc agagaccttg ctacaaccgc gccaattctc
     2641 aaacatggac ctaatccagg accagctgca tatgaaatga tatcgagatc tgtaacctgt
     2701 agatctgcct tttgaagaca ttcagaaagc acttgaggag aatgttcagc atgatgtcga
     2761 gaagcttctc gcggatgtat tccctctcct tctggtggtt tgtagatttt tctaacatcg
     2821 gataaaattt tcccactctt
//
LOCUS       DASPUS010000005         7653 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1510098, whole genome shotgun sequence.
ACCESSION   DASPUS010000005 DASPUS010000000
VERSION     DASPUS010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 7653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7653)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7653
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1510098"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3283)
                     /locus_tag="VEJ68_00100"
     CDS             complement(<1..3283)
                     /locus_tag="VEJ68_00100"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012216176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase II large subunit"
                     /protein_id="HXX05204.1"
                     /translation="MSDTLALRLGEVPMPKPYFDYFTEVSNEVFRIFEKAAAAKATLA
                     DSSGMVEPKIAFDLADRVSKMHDIDVTENLRQLIQTTTKELAALKLAEEIAQGKYSGP
                     DTGLQERLDLAVRVGLAIVTEGVTIAPLQGISEVEIKKNSDGTQYLSVSFAGPIRSAG
                     GTEAASTMLIADHVRKIAGLSKYQANSYDDETGRFVEELRVYEREVGNFQFHVPNEDL
                     ITVISNLPVELNGVDTDLVEIVSHRNMVRISTNRVRGGALRVLNDGLIGRSRKLLKLI
                     ELFKLDGWEWMKDLKGAIQTGDEDAAAHRMREVITGRSVLSMAKKFGGFRLRYGRSCN
                     TGFASVGIHPVVAEILDHVITVGTQIKLDIPGKAATVAFVDSIDTPIVRLKNGNVVKI
                     RDTLDGIHLKPQIEKILHLGDILISYGDFLENNAELVPTGYVEEFWIEELKEKISRYE
                     PDDKELLGYVSKIPDLEEAFKISLNFGIGLYPSYLYYWEQLAIEEFETILNPDKIEPD
                     LIAYPKNVKDVLEKLGVPHEIAGDSILLKDIEAKIFFYLLFRKPIQLDKTKTVPEIIS
                     TSSGIKIRNKFSTAIGVRVGRPEKAALRKMKPPVHTLFPVGSKGGASRDLLKAAKQPN
                     FYCNIYNRICKNCNTPSVSIACPRCKTKTTVTFVCPRCRDELEEDYCGRCKTRTSAHS
                     YKAFPLKELLYSAQERTGIRAKEPFKGVKELINQDRVPEPLEKGLIRQNFDLNVFKDG
                     TIRFDATNEPLSHFKPSWIGTSPQRLVQLGYTHDIDGLPLEDPEQMVELKIQDVIIPK
                     ECGDNLVQVCQYIDMELTKLFNHPQYYKVKNTTDLLGHLIIGLAPHTSVGIVGRIIGF
                     TNTQVCLGTAVWHSAKRRDADGDADSIMLLMDSLLNFSRLFLSDRIGGLMDAPLLVQP
                     IVMPQEVQRQAHNYEVVNAYPLSFFQATLQKEKASEIKDVEIVKSRLETEKQFYGYKF
                     THHTSTLTTTKPRSAYSTLGSLLEKLDMQIRTADIINAIDPSEVVSMVMTTHLLPDIM
                     GNLRAYSGQSFRCTACGASYRRVPLAGKCLECGNKLIQTMTRPSVQKYLKLARRMLDK
                     YRIEPY"
     gene            complement(3285..4034)
                     /locus_tag="VEJ68_00105"
     CDS             complement(3285..4034)
                     /locus_tag="VEJ68_00105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008297157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047294 - phosphoglycerol
                     geranylgeranyltransferase activity [Evidence IEA];
                     GO_process: GO:0006650 - glycerophospholipid metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="geranylgeranylglyceryl/heptaprenylglyceryl
                     phosphate synthase"
                     /protein_id="HXX05205.1"
                     /translation="MQSVETYLKASRKKKGALLFVLIDSENAHGKSASQLAKEAEKNG
                     ASAILVGGSSATDQMTMAETVKNIKKVVKIPIILFPGNITGVVPGADAILFSSLVNSD
                     NPYFISQAQALGAPNVLKFGLEPLPTAYIIIGEGTTVWHVGSVRAIPFDKPSLAAMYA
                     LSAQFMGMRFVYLEAGSGAKSNVRPEMVAAVRKLFKGFLIVGGGIKNTQTAGEIVKAG
                     ADALVMGTFIEKGGSFKTVSDIVKTIQSVRK"
     gene            4099..4461
                     /locus_tag="VEJ68_00110"
     CDS             4099..4461
                     /locus_tag="VEJ68_00110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05206.1"
                     /translation="MGKPPVDNFNNIIREIIKKSLFTERQIEIILKRKSLGDYQFEIT
                     KGAFYRQVGQCKDKLQALYYTWIVFRALGVIREEDMDVINRLSEQVSVIKSSDVFPER
                     EQEVMFVIQELLDRTCKL"
     gene            4585..5139
                     /locus_tag="VEJ68_00115"
     CDS             4585..5139
                     /locus_tag="VEJ68_00115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010190483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding protein"
                     /protein_id="HXX05207.1"
                     /translation="MLVDIPDPGVILGVIASFVIGIATVATYNKIRPRLGSNANNVKI
                     LLERLQNYENLLIDMKIKLDSLELERDVEELPQAQIQRVREQKPQVETPVQVREEKPK
                     ERVHNMNFGSATEYVLRLITEKPMTSRDIQITIGRSREHTSRMMKKLFEEGLVERDMQ
                     SKPFAYKITEKGSSKIKPRTPTLQ"
     gene            5291..5443
                     /locus_tag="VEJ68_00120"
     CDS             5291..5443
                     /locus_tag="VEJ68_00120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HXX05208.1"
                     /translation="MSSEQLIKITSAGTISIPKDFRKYLELQKGDYVKLLIDGDHIIV
                     RKVTIS"
     gene            complement(5440..5832)
                     /locus_tag="VEJ68_00125"
     CDS             complement(5440..5832)
                     /locus_tag="VEJ68_00125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05209.1"
                     /translation="MTRKKIRIDLEDADGAKYNLSLEGNVTRDKMLKIFELMDLINIE
                     EPDDQVQLDSIGSKIWNIIDKHFPLGKFTSSMILEKYEDEYGEPVKLSVISTYLSRFA
                     QKGRVGREKKGKEWTYQILKIAQKERET"
     gene            6309..7514
                     /locus_tag="VEJ68_00130"
     CDS             6309..7514
                     /locus_tag="VEJ68_00130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013483074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HXX05210.1"
                     /translation="MTRDPVDKLLDDAASGKSLFKNREVLHFTFIPDTIIHRDDEQKK
                     VTQSLLPLLKKARPSNLLVYGKPGTGKTLVVKKVLDKIHERVKDSSFPIQLLYANAKE
                     ETTLYGLLVKFGRQLGLKEKQLPTTGLSISEVFNRLLGVIAQEGLNTVFVVDEIDYLA
                     ELVSKTGKDVFYSLTRANERLKKGSLTLIGISNDLTFKERLDPRVLSSLSEEEIVFTN
                     YSVGQIKEILEKRINEAFIPNIVEQAAINLCAAMSGQEHGDARRAIDLLRVAGEIAER
                     EQSDSVKEDHIRRASLKMEEDKETTALNSYPLHEKLLILGVMKANGSTTGEIYQSYKN
                     LCKVTRQKELTQRRVTQMLSEIEMTGLISGKIIHQGMHGRTKKFSLTLNPDTVKKAFK
                     EDLALEDLI"
BASE COUNT         2244 a         1531 c         1533 g         2345 t
ORIGIN      
        1 agtatggttc tattcgatat ttgtcaagca ttcttcttgc aagcttgaga tatttttgaa
       61 cggatggtct tgtcatggtc tgaattagtt tgttgccaca ctctagacat tttcctgcaa
      121 gtgggactct tcgatagctt gcgccacatg cagtacatcg aaatgactga ccagaatatg
      181 ccctcaagtt tcccatgata tctggcagaa gatgtgttgt cataaccatg gaaactacct
      241 cacttggatc tattgcgttt atgatatcag cagttcttat ctgcatgtct agtttttcca
      301 agagagaccc caaggtagag taggcgctac ggggtttggt ggtagtcaga gtagaggtat
      361 gatgagtaaa tttgtatccg taaaactgtt tttctgtctc tagccttgat tttacaattt
      421 ctacatcttt tatctcactt gccttttctt tttgtaaggt cgcttgaaaa aacgataagg
      481 gatatgcatt taccacttca tagttatggg cctgtctctg aacttcttgt ggcattacaa
      541 ttggttgtac tagtaacggt gcatccataa gaccaccaat tctatcagac agaaatagtc
      601 ttgaaaaatt aagcaggctg tccatcaaaa gcatgatcga gtcggcatca ccgtctgcat
      661 ctcttctttt tgcagagtgc catactgcag taccaagaca gacttgggtg ttggtaaatc
      721 cgattattct tccaacaata ccaacagatg tatgtggtgc aagacctatg ataagatgcc
      781 ccagcagatc agttgtgttt ttgactttgt aatattgcgg atgattgaat agttttgtta
      841 gttccatgtc aatatactga catacctgca caaggttgtc gccacattct tttggaatta
      901 tgacatcttg aatttttagc tcaaccatct gttcaggatc ctcaagtggt agaccatcaa
      961 tatcgtgagt atagccaagt tgtactagtc tttgtggaga tgtgccaatc catgatggtt
     1021 taaagtgtga gagtggttca tttgtagcat caaatcttat ggtaccatct ttgaagacat
     1081 taagatcaaa attttgtctt atcagccctt tttcgagcgg ttcaggcacc ctgtcctgat
     1141 ttatcaattc ctttactcct ttgaacggtt cttttgccct tattccagtt ctttcctgtg
     1201 cagaataaag caactctttg agcggaaatg ccttgtatga atgggctgag gtgcgggtct
     1261 tgcaccttcc gcaatagtct tcctcaagct cgtcacggca tctggggcag acaaaggtaa
     1321 ccgtggtctt ggtcttgcat ctaggacaag ctatgctaac agaaggtgtg ttacagttct
     1381 tacagattct attgtagatg ttacaataaa aattgggttg ctttgctgcc ttgagcaggt
     1441 cgcgagaagc tccacccttg ctgcctactg gaaatagagt atgtacagga ggtttcattt
     1501 ttcttagtgc agccttttct ggccttccaa ctcttactcc aatggcagtt gagaacttgt
     1561 ttcttatctt aattcctgat gaggtagaga tgatttcagg aactgtcttg gttttgtcaa
     1621 gttggatagg ttttctaaaa agcaagtaaa agaagatttt ggcctcaatg tcttttagca
     1681 gaatagagtc tcctgcaatt tcatgaggaa cccccagttt ttctaaaaca tctttcacat
     1741 ttttggggta tgcgatgaga tccggctcta tcttgtcagg attgagaatt gtttcaaatt
     1801 cctcaattgc aagctgttcc cagtagtata gataagaggg atacagtcct atcccaaagt
     1861 tcagagagat cttgaacgct tcttcaaggt ctggaatttt ggatacatat cctaatagtt
     1921 ccttgtcatc tggctcgtat cttgaaattt tttcttttag ctcctctatc caaaactcct
     1981 cgacatagcc tgttggaaca agttccgcat tattctcaag aaaatctcca tagcttatga
     2041 gaatgtctcc caagtgtaag atcttttcaa tctgtggttt gagatgaatt ccatctaaag
     2101 tgtctcttat cttgactaca tttccatttt taagacgtac gattggggta tcaatggaat
     2161 caacaaatgc cactgtagca gcctttcctg gtatgtcaag tttgatctga gtgccaactg
     2221 taatcacgtg atctaaaatt tctgcaacca ccggatgaat tcctaccgat gcaaagccgg
     2281 tattgcatga tcttccatat cgtaatctaa aacctccaaa ttttttggcc attgaaagaa
     2341 cagaccttcc cgtaatcacc tctctcattc tgtgggctgc agcatcctcg tctcccgtct
     2401 gaattgcacc ttttagatcc ttcatccatt cccagccatc cagtttgaag agttctatca
     2461 acttcaagag cttacgagat ctgcctatga ggccatcatt tagcacacga agagcgcctc
     2521 cccgaaccct gttggtgctt atccgtacca tgtttctatg gcttacaatc tctactaggt
     2581 cggtatctac accattgagc tctactggta aattggagat tactgtgatt agatcctcat
     2641 ttgggacatg aaattgaaaa tttcctacct ctctctcata taccctgagt tcttccacaa
     2701 atcgaccagt ctcatcatca tatgagttgg cctgatattt ggaaaggccg gctatctttc
     2761 gaacgtggtc tgcaattagc attgtcgatg cagcctcggt accacctgca gagcgtatgg
     2821 gaccagcaaa agagacggat aggtattgcg tgccatcaga gttcttcttt atctccacct
     2881 cgcttattcc ttgtagagga gcgatggtta caccctccgt tactatagca aggcctaccc
     2941 ggactgccaa gtccaatctc tcttgtagac cggtgtctgg accagagtac ttgccctgtg
     3001 caatctcttc tgcaagcttg agtgcggcaa gttcttttgt ggtagtttga ataagttggc
     3061 gaaggttttc ggtaacatca atgtcgtgca ttttggatac acggtccgca agatcaaacg
     3121 ctatctttgg ctctaccatt ccagaagagt cagccaaggt tgctttggct gctgctgcct
     3181 tctcaaagat cctaaagacc tcatttgata cctcggtaaa ataatcaaaa tatggttttg
     3241 gcattgggac ttcgccaagt ctcaatgcta gtgtatctga catgctattt ccttacggat
     3301 tggatggttt ttacgatatc ggaaacagtt ttgaaacttc cacctttttc aataaatgtt
     3361 cccattacca aggcatcggc tcctgctttt acgatctctc ctgcagtctg tgtgtttttg
     3421 atcccgccac ctactatgag gaatcctttg aagagttttc ttacagctgc taccatctca
     3481 ggtcgtacgt ttgattttgc tccagagcct gcctctaggt aaacaaacct catccccata
     3541 aattgtgcag aaagagcata cattgcagcc aagcttggtt tgtcaaatgg tatggctctt
     3601 accgaaccaa catgccaaac cgttgtgccc tcgcctatta tgatataagc tgtgggtagg
     3661 ggctccagtc caaacttcag aacatttggg gcaccaagtg cttgggcttg tgagataaag
     3721 tatggattat cagagtttac aagtgaactg aaaagtattg cgtctgctcc tggaactaca
     3781 ccggttatgt ttcctggaaa gaggatgatc ggaatcttga caaccttttt gatgttctta
     3841 acagtctcag ccattgtcat ctgatcagtg gctgatgaac caccgactag aatagcagag
     3901 gcaccgtttt tttccgcttc ttttgcaagt tgagatgctg atttgccatg ggcattctca
     3961 gagtcaatta atacgaagag taatgcacct ttcttcttcc tagatgcctt cagataggtt
     4021 tctacgcttt gcatatgacg acttgatagc tatagataaa aagtttaatt gaatgaagtt
     4081 atacagtttt gtattactat gggcaaacca ccggttgata attttaataa tattataagg
     4141 gagattataa aaaaatcatt atttactgag cgtcagattg aaattatttt aaaacgtaag
     4201 agcctggggg attatcagtt cgagataact aaaggggcat tctacaggca ggttgggcaa
     4261 tgtaaggaca aattgcaggc attatactat acctggatcg tgtttagggc cttgggagtc
     4321 attcgtgaag aggatatgga tgtgataaat cgattatctg agcaggtttc cgtgataaaa
     4381 agcagtgatg tctttcctga gcgtgagcaa gaggtgatgt ttgtgataca agagctctta
     4441 gatcgcacat gtaagttgtg attgtgccta aaattacgcc agttctatga ataatttgtg
     4501 ataaaacttg tttgtgattg atgtgtagaa tgtgaaataa ttttattcaa tcatgataaa
     4561 tcacgtcatt aatgatttgt agtgatgtta gtagatatcc cagatccagg agtgattcta
     4621 ggcgtaatag catcatttgt gattgggatt gcaaccgtag caacctataa caagataaga
     4681 ccacgtctgg gttcaaacgc taacaatgtg aaaattttat tagaacgcct tcaaaattat
     4741 gaaaatctat taattgatat gaaaattaag ctagattcat tagaattaga gagggatgta
     4801 gaagaacttc ctcaggcaca aattcaaaga gtgagagaac aaaaaccgca ggtagagaca
     4861 ccagtacaag tgagagaaga aaaaccaaag gagagagttc acaatatgaa ttttggaagc
     4921 gctacagagt atgtactgcg attaatcacg gaaaaaccaa tgacgtcacg tgacatacaa
     4981 atcacaatag ggcgaagccg agaacacaca tcacgcatga tgaagaagct ctttgaagag
     5041 ggtttggttg aaagggacat gcaaagcaaa ccatttgcat acaagataac agagaaggga
     5101 tcaagcaaaa ttaaaccacg cacccccaca ctccaatagg tttttagata aattatcgat
     5161 caaattacaa cattatttag atgagttttt tgtttttcaa gctcaggtct atgatagtca
     5221 attttttgat atttattatt aatttaagtt aattatacat tcttaaatta atgaatttat
     5281 aattatactt atgtcatcag aacagctgat aaagataaca tctgctggaa caatttccat
     5341 cccaaaagac tttagaaaat atctggaact ccaaaaagga gattatgtca aattattgat
     5401 tgatggcgac catattatag tcagaaaagt aacaatttct taggtttctc tttctttttg
     5461 ggctatcttg aggatctggt aggtccattc ctttcctttc ttctcccttc ctacccttcc
     5521 tttctgggca aatcgtgaaa ggtaggtaga gataacacta agtttgaccg gttcgccata
     5581 ctcatcttca tacttttcta atatcataga tgaggtgaac ttacctaatg gaaagtgctt
     5641 gtctataata ttccagatct tagagcctat ggagtccaat tgtacttggt catctggctc
     5701 ctcaatgtta atcaaatcca ttaattcgaa tatctttaac atcttatccc gggtaacgtt
     5761 gccttccagg ctaaggttgt atttggcgcc gtctgcgtcc tccaagtcta tacgtatctt
     5821 tttccgggtc aatgtgatcg atccgattaa caccttaaca cttgaacaga tcatagaaga
     5881 tttgttaact agcgggtgtg ttaacattca ctgcgtaccc cacgaggggc tctttttcac
     5941 atcttaacaa tccaagtggc ctttctacca tacatatggt aaaatctatg cctggagtgg
     6001 aaatataggg gtcgtttctg gcatattaac agtgttaaga cctatcttca cgcctagagt
     6061 ggaaataatg gggtcaattt tggctccttt gtacccatag ttaacaccaa gttcactatt
     6121 tgttaaccta tttccaggca cacccacaca cccttatttc cactaaatca ttattaaaaa
     6181 aatttttttt aagaaaataa aaataattaa tgatatacta aattcaaatt agttattcta
     6241 ttctaatctc ttatctttct taagaggaat catatgtgga cagagaagaa acattggtgt
     6301 gtgggtcgat gacaagagat cctgtcgata aactacttga cgatgcagca tcaggcaaat
     6361 cattattcaa aaaccgagag gttctacatt ttacatttat tccagatacc ataatacata
     6421 gagacgatga acagaaaaaa gtcacccagt cattacttcc tcttttaaaa aaggcaagac
     6481 catccaacct attggtttat ggaaaacctg gaactggcaa gaccctagtt gtaaaaaagg
     6541 tattagataa aattcatgag cgagttaagg acagctcatt tccaatccaa ctattatatg
     6601 caaacgccaa agaagaaacc acactttatg gtttgttggt aaagtttggc cgtcagctag
     6661 gactaaaaga aaaacaacta ccaaccaccg gactttcaat aagcgaagtg ttcaacaggc
     6721 ttcttggagt aattgctcaa gaaggtctca acaccgtctt tgtagtagat gagatcgact
     6781 atctagctga actggtatca aagacaggca aagatgtttt ttattcttta actagagcaa
     6841 acgaacgact aaagaaaggc tcccttacac tcattggaat ttcaaatgat ttaaccttca
     6901 aggaacgatt ggacccacgg gtgctgagca gtttaagtga ggaagagatt gtatttacaa
     6961 attatagtgt tggccaaata aaagaaattc tagaaaagag gatcaatgaa gcgtttattc
     7021 caaatatcgt agaacaagct gcgataaatc tctgtgctgc catgtctggc caagagcatg
     7081 gcgatgcaag acgtgcaatc gaccttctcc gagtagcagg agagattgca gaacgtgaac
     7141 agtcagattc agtaaaagag gatcatatcc gtagagcatc actaaaaatg gaagaggata
     7201 aggagaccac cgcactcaac tcatacccat tacatgaaaa actactcatt ttaggagtaa
     7261 tgaaggcaaa tggtagcaca acgggagaga tttatcaatc ctacaaaaac ctctgcaagg
     7321 tcacaagaca aaaggaatta acccaacgtc gtgttaccca gatgctaagc gaaatagaga
     7381 tgacgggcct tatttctggt aagataattc accaagggat gcatggaaga acaaaaaaat
     7441 tctctttaac actaaatcca gatactgtaa agaaggcatt caaagaagac ttggctttag
     7501 aagatcttat ctaattattc ttcagcaaaa tttttcgtaa aaaccttcat tgttgctaaa
     7561 ttcacaatta ctgcaattcc tggcgttgga ttgattccaa cacttgcctg aaaaggagtc
     7621 tgggtttgcc atgcgccaga gttaacaatt aac
//
LOCUS       DASPUS010000006         2074 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1236254, whole genome shotgun sequence.
ACCESSION   DASPUS010000006 DASPUS010000000
VERSION     DASPUS010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2074)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1236254"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..434
                     /locus_tag="VEJ68_00135"
     CDS             <1..434
                     /locus_tag="VEJ68_00135"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HXX05211.1"
                     /translation="SYDPTGPCWDCRSMEGLDYIGVSIYSGNLEISKGNYFEAIGYFD
                     KVLENDPTNIIALQGKGYALANIGKYDDAISSLDKVLKIYTHNPIVILIKEDALYGKA
                     VSLANLGKYQEAVIYYDKILKMDPKFSFTETDMKVIQKFTK"
     gene            complement(469..741)
                     /locus_tag="VEJ68_00140"
     CDS             complement(469..741)
                     /locus_tag="VEJ68_00140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05212.1"
                     /translation="MSVMNLRKPFRIVSRIVPNIETEVGISAELELEQLVQNKFDDLG
                     GSIMCPYDISKIEKKKREKWLEELRENHHIIIYVPKSGHGGVFYVD"
     gene            complement(790..1047)
                     /locus_tag="VEJ68_00145"
     CDS             complement(790..1047)
                     /locus_tag="VEJ68_00145"
                     /inference="COORDINATES: protein motif:HMM:NF025774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MEDS domain-containing protein"
                     /protein_id="HXX05213.1"
                     /translation="MQTIQHPIQFVDHMESSKHILLLYDDPEAAKLVMFRFIKNGLVN
                     GEDCLYLTEEDSGSIVIKMMTHGIPLRYFQNKQLQVLQIDN"
     gene            complement(1156..1707)
                     /locus_tag="VEJ68_00150"
     CDS             complement(1156..1707)
                     /locus_tag="VEJ68_00150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05214.1"
                     /translation="MRGDPKFSNKTNITISVDGQVGDEIRQYAEKQGLSTNSLVNKIL
                     NDYVMFGKYFQDHIPVVISPKIFSYLLGEVDEKIWIKSWEIALGEVTPEVFMMHNLEP
                     TLDNLVRYLLGNIGSRVGIFDKFTCQENGTENYKLVMVHKYGIKWSRVLSTSFSNMFV
                     KAFPVKVTTQVSANTLTIEIQKK"
     gene            complement(1780..>2074)
                     /locus_tag="VEJ68_00155"
     CDS             complement(1780..>2074)
                     /locus_tag="VEJ68_00155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05215.1"
                     /translation="IISEMVQSIFAHNNLSYTMDSMVKFYFESVGLWSGLYSIFKRYS
                     DMGSTNLIFEHKYGIKWSKIIAQSISNLMKGTLNLSLEYKILPNTVILQVDKR"
BASE COUNT          650 a          378 c          327 g          719 t
ORIGIN      
        1 tttcttatga tccaacagga ccatgctggg attgtcggtc tatggaggga cttgattaca
       61 ttggagtaag tatctatagc ggaaatttag aaataagtaa aggaaattat tttgaagcga
      121 taggttattt tgacaaagtt ctagaaaatg atcctactaa cattatcgca ctacaaggta
      181 aaggatatgc acttgcaaat ataggaaaat atgatgacgc gatttcatca ctagacaaag
      241 tactgaagat atatacgcac aatcctattg taattttaat aaaagaagat gcattatatg
      301 gaaaagcagt ttctcttgcc aatcttggta aatatcaaga ggctgtaatc tactatgaca
      361 aaattctcaa aatggatcca aaattttctt ttacggaaac ggatatgaaa gtaatccaaa
      421 aatttacaaa atagaatgaa atttccagtc ctcaaaggct atggcttctc aatcaacgta
      481 aaaaactcct ccatgacctg attttggcac ataaattatt atgtgatgat tttcacgtag
      541 ctcctcaagc catttttctc tttttttctt ctcaatttta gaaatatcat aaggacacat
      601 tatggaacca cctaaatcat cgaatttatt ctggacgagc tgttctaatt ccaattctgc
      661 ggaaattcct acttccgttt ctatgtttgg aactattctt gatactattc taaagggctt
      721 tcgtagattc atgacagaca tcattatatc ttttctacaa cttgacacaa tttcatcgcg
      781 atcgccatat cagttatcta tttgtaaaac ttgaagttgc ttattttgaa aatatcgtaa
      841 tggaatccca tgcgtcatca tcttgatgac aatggaaccc gaatcttctt ctgttaggta
      901 taggcaatct tctccattta ccaaaccatt ttttatgaat ctgaacatta ccagctttgc
      961 agcttccgga tcatcatata ataacaatat gtgtttgcta gattccatat ggtcaacgaa
     1021 ttgaattgga tgttgaattg tttgcattaa ctggacttaa ctcattgaaa tatttaatac
     1081 tctaacacca agttacacga atttacacga tatgttgctg tgccctaatg atttaagatg
     1141 agagttgatt caggattatt ttttttgtat ttctattgta agggtgtttg cggaaacctg
     1201 tgttgtaact tttactggga atgctttcac aaacatatta gaaaatgagg ttgatagcac
     1261 tctagaccat ttaattccat atttatgaac catcaccagt ttgtaattct ctgttccatt
     1321 ctcttgacaa gtaaacttgt cgaatattcc tactcttgac ccaatattgc caagcagata
     1381 gcgtaccaag ttatctaaag taggttccag attgtgcatc ataaatacct ctggtgtaac
     1441 ttctccaagt gctatttccc atgatttgat ccagattttc tcatccacct cccctagcaa
     1501 atagctgaat atcttaggtg aaatcactac tggtatgtga tcttgaaaat atttgccaaa
     1561 catcacatag tcgtttagta tcttatttac aagtgagtta gtactcaacc cttgcttttc
     1621 agcatattgt cttatttcgt caccaacttg accgtcaact gatattgtta tgttggtttt
     1681 attgctaaat tttggatccc cacgcataca ggtattagtt ttatcatgaa cttataacat
     1741 ttatcgcaag agaagaaaac atagccctat ccatgcaaat tatcttttgt ccacttgtaa
     1801 aattacagtg tttggaagga ttttgtattc taatgacaag tttagtgttc ctttcattaa
     1861 atttgaaatt gactgtgcta ttatcttgga ccatttaatc ccatatttgt gttcaaatat
     1921 caagttagtt gaacccatgt cgctgtaacg tttgaaaata ctgtataaac cagaccacag
     1981 accaacactc tcaaaataaa actttaccat actgtccatt gtgtaggaaa ggttgttatg
     2041 tgcaaaaatt gattgaacca tctcactgat tatt
//
LOCUS       DASPUS010000007         2062 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1375536, whole genome shotgun sequence.
ACCESSION   DASPUS010000007 DASPUS010000000
VERSION     DASPUS010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1375536"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..554)
                     /locus_tag="VEJ68_00160"
     CDS             complement(<1..554)
                     /locus_tag="VEJ68_00160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HXX05216.1"
                     /translation="MTKLDQALSYFHDRVSECIKSGKNISVVTHLDCDGITSGSIVTK
                     SLIRAGAKCTVRTVNEFNKNLIDKLRMESRQFHVITDLGGGFAKDLDSKLDDDWIVVD
                     HHQILEEEFDNERVINAWKYDIDGGLNVSAGGMAYLVSKALHKENTDLAWIAVVAALG
                     DRQDQGEKKSFTGINLEIAATAKK"
     gene            complement(554..1003)
                     /locus_tag="VEJ68_00165"
     CDS             complement(554..1003)
                     /locus_tag="VEJ68_00165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HXX05217.1"
                     /translation="MGRLHSHRHGKSHSIRPVTPSAPTWVKQNPGEIEELVAKYAKEG
                     LRPSEIGIKLRDQHSIPLIRQIVKKSVAEILEQKGVKPDMPEDLNNLVTKALGLQKHL
                     KEHKSDRRNVRSLELLEAKVHRLSSYYKEIGRIPKTWKYKAVIAQLE"
     gene            1111..1413
                     /locus_tag="VEJ68_00170"
     CDS             1111..1413
                     /locus_tag="VEJ68_00170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05218.1"
                     /translation="MKTPIIIGAALLALFVASSFAPFAAAQYVPGGGLSLEDELKLAK
                     ARIAAVQANPHAGSGTPYLDANGVIGASIISAAVFGGIFIAFVVRAKQIEKARGTR"
     gene            1518..1787
                     /locus_tag="VEJ68_00175"
     CDS             1518..1787
                     /locus_tag="VEJ68_00175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05219.1"
                     /translation="MSAIFAMLVGMLSNYVGQIGPNYDPLFYDVMTYIFATIMFTVFL
                     LGVIAFWLRAHGLGSGAVRERWVAELNKHFEREGIGLIPDNGKYW"
     gene            complement(1831..>2062)
                     /locus_tag="VEJ68_00180"
     CDS             complement(1831..>2062)
                     /locus_tag="VEJ68_00180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05220.1"
                     /translation="GVIHVAATKEYPFEVGQFLWIWGFDLRDMDATKSKIYANDVESP
                     DFIHTIIQDGVHYKADFVSKNQGAPTFTPPQN"
BASE COUNT          575 a          435 c          376 g          676 t
ORIGIN      
        1 ttctttttcg cagtagcagc aatttcaaga ttgattccag taaaagattt tttttctccc
       61 tggtcttgtc tgtctcccaa agcagctact actgcaatcc aagccaaatc agtattttct
      121 ttatgaagag cttttgaaac aagatatgcc atacctcctg ctgaaacatt taacccacca
      181 tctatatcat atttccaagc attgattact ctttcattgt caaactcttc ttctaatatc
      241 tgatgatgat caactactat ccaatcatcg tcgagtttac tgtccaaatc ttttgcaaat
      301 cctcctccta aatcagttat gacatgaaac tgtctagatt ccattctgag cttatcaatc
      361 aaattcttat taaactcgtt taccgttcga acagtacatt ttgctccagc tctgataaga
      421 gattttgtaa caatacttcc agaagttatt ccatcacagt caagatgagt tactactgaa
      481 atgttctttc ctgatttgat acattcagaa actctatcat gaaaataaga taatgcttga
      541 tccagcttgg tcattactca agttgagcta tgactgcctt atatttccaa gttttgggga
      601 tacgaccaat ttctttgtag taagaagata atctgtgaac tttggcttct aacaactcaa
      661 gcgatctcac atttctcctg tcagacttgt gttcctttag atgcttttgc aagcctagag
      721 cttttgtaac aagattgtta agatcctctg gcatgtctgg cttgactcct ttttgctcca
      781 gtatttcggc cacagatttt tttacgatct gtcttataag gggaatagaa tgctgatctc
      841 gtagttttat tccaatctca cttggtctca aaccttcctt tgcatacttc gcaacaagct
      901 cttctatctc tcctgggttc tgttttaccc aagttggtgc actaggagtt acaggtctta
      961 ttgaatgaga tttgccatgt ctgtgtgaat gaagtcgacc cacgagccgc ttgcttttta
     1021 aggaaacata aatgtttact tgaaatacca gatattgtta ttacaaaaaa gttaaatagt
     1081 aacgcaagtc attttgagat aggtactaaa atgaaaacac caataattat tggagctgca
     1141 ctactcgcac tcttcgtagc ttcatcattt gctccatttg ctgcggcaca atacgtcccg
     1201 ggcggtggac tgtctctaga agatgaattg aagttagcaa aggcgagaat tgcagcagta
     1261 caagccaatc cgcacgcagg ttcaggtaca ccatacctag atgcaaacgg tgtcattggt
     1321 gcatcaatta tatcggctgc ggtatttggc ggaatcttta ttgcatttgt cgtaagggca
     1381 aagcaaatag agaaggcaag aggaactcgc tagttctttt ctttttctta ttttattatt
     1441 ctctccctag actagatcgt attttacaac catattacag aaatgtatat atcgtaccta
     1501 aattgttttg aataatgatg agcgcgatat tcgctatgct cgtaggtatg ctgtcaaact
     1561 atgtaggtca gataggtcca aactacgacc cactgttcta cgatgttatg acttacatat
     1621 ttgcaacaat catgttcaca gtattccttc tcggagtcat tgcattctgg ctcagagcac
     1681 acggacttgg aagcggtgca gtcagagaaa gatgggtggc tgagcttaac aagcactttg
     1741 agagagaagg cattggtctg atcccagaca acggaaaata ctggtaaact ccatcctttt
     1801 tccttctttt tgaattctca atataacacg ctagttctga ggaggtgtaa aggttggagc
     1861 gccttgattc tttgacacaa agtctgcttt gtaatggact ccgtcttgta ttattgtgtg
     1921 aataaagtca ggtgattcaa catcatttgc atatatctta gatttggttg cgtccatatc
     1981 gcgcaaatca aaaccccaga tccacaagaa ctggcctacc tcaaatgggt actcctttgt
     2041 tgccgcaaca tgaattacac ca
//
LOCUS       DASPUS010000008         3872 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_143001, whole genome shotgun sequence.
ACCESSION   DASPUS010000008 DASPUS010000000
VERSION     DASPUS010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3872)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3872
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143001"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(235..786)
                     /locus_tag="VEJ68_00185"
     CDS             complement(235..786)
                     /locus_tag="VEJ68_00185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05221.1"
                     /translation="MSDFPFLEQLAAQIKRNRQQLTDVEDELATVNFRIHEIPLKITT
                     ESTFAKMIGEQYNDATTELEKAKQKLTEDKENLTTKVNDDISTFITEFTSPELIIPLD
                     PHANVAEGNTVFKYKNGAVFTSVFNLLGELLGLSTPILVKDVMFSASEIVIKVTDEYE
                     AKQKFLSSINEVQKTLSIKRRKQ"
     gene            complement(789..2183)
                     /locus_tag="VEJ68_00190"
     CDS             complement(789..2183)
                     /locus_tag="VEJ68_00190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HXX05222.1"
                     /translation="MSLAKNAPLPPAPVLMTCFGHCGIGLGAESYRRLLIDVGADPLK
                     PTLKGEKEESRVLKRYGSTILRFPNSYGGSEIPLIPRALLIDLDPRAANLILQSYPDL
                     FALRDKHVISGAGGAARNWAEGRSRFVKEVSVKYDMQKQLAGLSPEPVRGFTIPFAMG
                     GGTGSSFASAFMQYIKKDTKEHATVASFGLLPEFGWDPIIFEAAAINIVMNLEHQIKY
                     SDASILFSNKTLRQLAHKHEKRIDKLKSIIDDLPKEQEIGWKDYRGMNLIAANAISMF
                     IASFARETEWDMSNYRTWLATKKPKFAIAWVIPVIPEERQWGTDLIAGGKTNTMESIV
                     EHIHKREDAVLFDIDENDIRDKGGPKDSCCALVKVKGEFDVKEREILKNMIKDRFHIE
                     EARMIFVKIPILETEQSNVTILVNTKAIGPKILEIASEAESSWDSYKDEYGKWGLTNE
                     EFKQSLMDVVHQFS"
     gene            complement(2348..2653)
                     /locus_tag="VEJ68_00195"
     CDS             complement(2348..2653)
                     /locus_tag="VEJ68_00195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05223.1"
                     /translation="MSEELLKSVKKFLASGKGDVKRLREIMDTIKGGEPLLMSDYKYM
                     ETLISQNVDPQPQEQEVSRPNTPQTMDDPLEILRVRLAEGHITIDEFRELKNALADE"
     gene            complement(2654..3469)
                     /locus_tag="VEJ68_00200"
     CDS             complement(2654..3469)
                     /locus_tag="VEJ68_00200"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HXX05224.1"
                     /translation="MNSSTEIESEKMISEGLSYAKLGKNKEAMSFFDKALKTDPNNLE
                     ALYQKGLILVNSNKNKEATSCFEKILEKDPNHIAALNNLGNVFSELQQFERATTFYDK
                     ALKLDPNYTPALYNKGIAQVRIGKYDEALTYLNRVLNIESENVSALYYKGLVLGKLKK
                     HDDAIVCFDKVLEKEPENFEAVFYKATELAEIKKHQDAIVLFDKILGEHPKNGTVIYA
                     KARSKAEIGDTNDALVLLAQAISYYGKTIKGWAVKDPSFDRLKEDLKFKMIVK"
     gene            complement(3510..>3872)
                     /locus_tag="VEJ68_00205"
     CDS             complement(3510..>3872)
                     /locus_tag="VEJ68_00205"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HXX05225.1"
                     /translation="VAFLYLGLSMDIQNIGTKLPLIIMAFGAVLAARAVSTYPILSAT
                     HMFAQEKWPSTWKNVVMIGGMRGALSVALVATLPESDFKEILKTITFGVVLASLIVQY
                     PILTRYIKKAFPETTIQQ"
BASE COUNT          990 a          782 c          696 g         1404 t
ORIGIN      
        1 tttttcaagc tctgttgtgg catcattgta ttgttctggt ttgctttacc gccaaagccg
       61 ttaaacagtg aaaaagtcga actaccgacc atgataatgc caaagaatgc tgccatggca
      121 attagcaata ttttcttatt cctttgtttc acaaaaaagg ggctattctt cctcgttata
      181 ttttatacgc aagagaactg atttttatga aaaggctgta cctttaatct cgaactattg
      241 ctttcttctt ttaatcgata gggttttttg cacttcgttt atactactga gaaacttttg
      301 ttttgcttca tactcatctg ttacctttat gacaatttca gaggccgaaa acattacatc
      361 ctttactaga attggtgtgc tcaaaccaag aagctcgccc aataagttaa agacgctggt
      421 aaacactgca ccatttttgt atttgaaaac agtattgcct tcagccacat ttgcatgtgg
      481 gtctaatggt attatcagtt ctggagaggt gaactctgtt atgaaagtcg agatgtcatc
      541 atttaccttg gtggtaagat tctccttgtc ttctgtaagc ttttgttttg ctttttcaag
      601 ctctgttgtg gcatcattgt attgttctcc tatcatcttt gcaaaggtag attctgtagt
      661 tatcttaaga ggaatctcgt gaattcgaaa attaactgta gcaagttcat cttcaacatc
      721 ggtaagttgt tgtctgtttc tcttaatctg agctgctagc tgctccaaga aaggaaaatc
      781 agacatgcct aactaaattg gtgtacaacg tccatcagac tttgtttgaa ctcttcattt
      841 gtgagtcccc atttgccata ctcatctttg taggaatccc atgatgactc tgcctcactt
      901 gcaatctcta gaatctttgg tcctattgcc tttgtattta caagtattgt gacattggat
      961 tgttctgttt ctaatatagg aatcttgaca aaaatcattc ttgcctcctc gatatggaat
     1021 ctatccttta tcatgttctt tagaatctct ctttctttga catcaaattc gcctttgacc
     1081 ttgactaatg cacaacacga gtcctttgga ccgcccttgt ctctgatatc gttttcatct
     1141 atgtcaaaca gtaccgcatc ttctcttttg tgtatgtgtt ctactatgga ttccatggtg
     1201 tttgtctttc cacctgcaat gagatcagtt ccccattgtc tttcttctgg aattactggt
     1261 atgacccaag caattgcaaa ttttggtttt tttgttgcaa gccaagttct atagtttgac
     1321 atgtcccact ctgtctctct tgcaaatgat gcgataaaca tggagattgc attggcagca
     1381 atcaaattca ttcctctgta atctttccaa ccaatctctt gttcttttgg aaggtcatct
     1441 atgattgatt ttaacttgtc aattcttttt tcatgcttgt gagctaactg tcttagagtc
     1501 ttatttgaaa ataatattga agcatcacta tactttatct ggtgttccaa attcattact
     1561 atgtttattg cggcagcctc gaagattatt ggatcccaac caaattctgg taagagtcca
     1621 aaagatgcta ccgttgcatg ctcttttgta tcctttttga tatattgcat aaaggcactg
     1681 gcaaaggaac ttccagttcc tcctcccatt gcaaatggaa tggtaaatcc tcttacaggt
     1741 tctggtgaca gaccggccaa ttgtttttgc atgtcatatt ttacactgac ttctttgaca
     1801 aatctacttc gaccctctgc ccagtttctt gcagcgcctc ctgctcctga aattacatgc
     1861 ttgtcacgta aagcaaatag atctggataa gattggagaa ttaggttggc tgctcttggg
     1921 tctaaatcga ttagtaaagc tcttggaatt aatggaatct cacttcctcc ataagagttt
     1981 gggaatctca atattgtact gccgtatctt ttgagtacac gcgattcttc tttttcgccc
     2041 ttgagtgttg gtttgagtgg atctgctcca acatcaatta gcaatcttct atatgattct
     2101 gcaccaagtc caattccaca atgaccaaaa catgtcatca gaacaggtgc tgggggtaat
     2161 ggagcattct ttgccaaact catcacctta tggaagtatg tacctctctt taaccaagga
     2221 gttcaagatt gtaaagtcta tacttgattg ttctagacat gaaatagtgt caactgtctt
     2281 caattgtgcc atttgatcta agaagtgatt gttttgaatt taagatttaa gaggaaatca
     2341 tacttttcta ttcatccgct aacgcatttt ttagttccct gaactcgtca attgttatgt
     2401 gaccctctgc aagtcttact cgtaggatct caagaggatc atccatggtc tggggggtat
     2461 tcggtcgtga tacctcttgt tcttgtggtt gtgggtccac attttgggag atgagggtct
     2521 ccatgtattt gtaatctgac atgagcagtg gttcaccccc ttttatggtg tccataatct
     2581 cacgcaatct tttcacatct cccttaccag atgctaggaa tttttttaca gattttagaa
     2641 gttcttctga catttatttc actatcattt tgaattttag atcctctttt agtctatcga
     2701 atgaaggatc ttttactgcc catcccttga tcgtcttgcc gtaatatgat attgcctgtg
     2761 ctagcaaaac caacgcatca ttggtatcgc caatctctgc cttactgcgt gcctttgcat
     2821 aaattactgt accatttttt ggatgttcac ctagtatctt gtcaaaaaga acaatggcat
     2881 cttggtgttt ttttatctct gcaagttcag ttgccttgta aaatactgcc tcgaaatttt
     2941 ctggctcttt ttctagtact ttatcaaagc agacaatcgc atcgtcatgt ttctttagct
     3001 tgcccaagac cagtcccttg taatataacg ctgaaacatt ttctgattcg atattcagta
     3061 ctcggttgag gtaagtaagg gcttcgtcat attttccaat ccttacttgt gcgataccct
     3121 tgttgtacaa ggcaggcgta taatttggat caagttttaa ggccttgtca taaaaggttg
     3181 tagccctttc aaactgttgt aattcggaaa agacatttcc caagttgttt aatgcagcaa
     3241 tatgatttgg atctttttca agaatctttt caaagcatga tgtggcttcc ttatttttgt
     3301 ttgaatttac taaaatcaaa cccttttggt atagcgcctc tagattattt ggatcagtct
     3361 tgagtgcttt gtcaaaaaat gacattgctt ccttgttttt tccgagtttt gcatacgaca
     3421 aaccttctga gatcattttc tcagattcaa tttctgttga tgaattcaat ttggtattac
     3481 cttaaactag tattgacatt ttatttgggt tactgttgaa ttgtagtttc aggaaaagct
     3541 ttcttgatat atcttgtaag aattggatat tgtactatta acgaggcaag tactactcca
     3601 aaagttatag tcttgagaat ttctttaaag tcactctcag gaagagttgc tacaagcgca
     3661 accgaaagtg cgcctctcat tcctcctatc attactacat ttttccaagt ggacggccat
     3721 ttttcttgag caaacatgtg agttgcggaa agaattggat atgtggatac tgcccttgca
     3781 gccaagactg caccaaatgc catgataatt agaggtaatt ttgttccaat gttttgaatg
     3841 tccatgctca agcctagata caagaaagcc ac
//
LOCUS       DASPUS010000009         2097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_417564, whole genome shotgun sequence.
ACCESSION   DASPUS010000009 DASPUS010000000
VERSION     DASPUS010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417564"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..355)
                     /locus_tag="VEJ68_00210"
     CDS             complement(<1..355)
                     /locus_tag="VEJ68_00210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013481305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HXX05226.1"
                     /translation="MSFGGGDVDTLNLLFDKLQNLLNDTQGYYESFLDTNASFKQGKL
                     SEKEFFEKLGDYVVAYSALEFLAVKVIFELKKSLDKITGSHMGGATMSGTMPSGMGFG
                     SSQASNVTAATLPGAG"
     gene            complement(420..752)
                     /gene="trxA"
                     /locus_tag="VEJ68_00215"
     CDS             complement(420..752)
                     /gene="trxA"
                     /locus_tag="VEJ68_00215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HXX05227.1"
                     /translation="MEKAKPVNAKDWDKEVLNSQIPVFVDFWAEWCGPCRMVGPVVEE
                     LASEYAGKISFVKVNVDENNELASKYNVFSIPTLAIFNKGQIVTQQVGAASKSSYKTM
                     IDKTLEKI"
     gene            complement(796..2061)
                     /locus_tag="VEJ68_00220"
     CDS             complement(796..2061)
                     /locus_tag="VEJ68_00220"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HXX05228.1"
                     /translation="MTKFEELGIKNPILTALTEINFREAFPIQAAAIPILLSGQDVIG
                     QAHTGTGKTAAFSLPIIQNIIPKRGIQALILAPTRELAVQITGEIQKFSRHSGIRYVT
                     IYGGQSINVQFNELERGVEIVVATPGRLIDHIKRGSVRLENVKYVILDEADTMLDMGF
                     IEDIKFILDLVPADHLTALFSATMPPEILMLAEKYMRNPQRVFIDSDDLSGEGIEQAF
                     LVIKDREKTDYLFKFIKENKTGQTIVFCSTKERTRRVARELEKSRFNVVSIQGDMSQF
                     RRDKAMYMFRKGKADILVATDVAARGIDVPEVALVINYDVPNHDLVYFHRIGRTARAG
                     AKGRAITLVSYSSIGDFKAISNQTKVPMKDLNKELGIEVRIPDPLKREVAPRRGYARS
                     GNWGKRRDDRRRYGNGNSNRNYYGLKSRW"
BASE COUNT          568 a          444 c          333 g          752 t
ORIGIN      
        1 gaccggcgcc aggcagtgtt gctgctgtaa cgttagatgc ctgcgaacta ccaaatccca
       61 ttccgcttgg cattgtacca ctcattgttg cccctcccat atgacttcct gtaattttat
      121 ctagtgattt ttttagctca aatattactt tgactgcaag aaattctaaa gcagaatatg
      181 cgacgacata gtcacccagc ttttcaaaaa actctttttc agataatttt ccttgcttga
      241 atgacgcatt tgtatcgaga aatgactcat agtaaccttg tgtatcattt aacaagttct
      301 gtagtttatc aaataaaaga ttaagagtat caacatctcc tcccccaaat gacatgctga
      361 ctgtttcttt gtccgatatt aattatttta gattaaaaat atgagtgttt agtttgagac
      421 tagatttttt cgagagtttt gtctatcatg gttttatatg aagacttgga tgctgcccct
      481 acttgctgcg tgacaatctg tcctttattg aagatagcca gtgtgggaat actaaagaca
      541 ttatattttg atgccaattc gttgttttca tccacattta ccttcacaaa actaatcttt
      601 cctgcatatt cacttgcaag ttcttcaaca actggaccta ccatcctaca tggtccgcac
      661 cattcagccc aaaaatctac gaacacggga atttgtgaat ttaatacttc tttgtcccaa
      721 tcttttgcat ttacaggttt tgctttttcc atattttatt aagataaagt atccctaaat
      781 atattgaacg tttttctacc agcgactttt aagtccatag taatttctat tactattacc
      841 attaccatat cttcttctgt catcacgtcg ttttccccag tttccagatc ttgcataacc
      901 tctccttggg gcgacttctc tctttaatgg atcaggaatt cttacctcga taccaagttc
      961 cttgttaaga tccttcatag gaacctttgt ttgattggat attgccttga aatctccaat
     1021 tgaggaataa gagaccaatg taatagctcg cccttttgct cccgctcttg ctgttcttcc
     1081 tattctatga aaatagacaa gatcgtggtt tggaacatca taatttatta ctaaagccac
     1141 ttcgggaaca tcaattcctc ttgctgccac atcagttgca accagtatgt ccgcttttcc
     1201 ttttctgaac atatacatgg ccttatctct tctgaattgt gacatatcgc cttggattga
     1261 taccacatta aatcttgatt tttcaagttc tctggcaacc cgtcttgttc tttctttagt
     1321 ggaacaaaat actatggttt ggccagtctt gttttctttg ataaatttaa aaagataatc
     1381 tgttttttct ctatctttta ttactaagaa agcttgttct attccctcgc cacttaggtc
     1441 atctgagtca atgaagaccc gttgtggatt tcgcatgtat ttttctgcca acatcagaat
     1501 ttcaggaggc attgttgctg agaataatgc tgttaaatga tctgctggaa ccagatctaa
     1561 aatgaattta atgtcctcaa taaatcccat gtcaagcatg gtatcagctt cgtctaaaat
     1621 cacatatttt acattctcta gccttacaga tcctcttttg atgtgatcaa ttaaacgtcc
     1681 tggagttgca acaactatct caactcctct ttctaactca ttgaattgaa cattaatgct
     1741 ttggcctcca tagatagtta catatctgat acctgaatgc ctagaaaatt tctgaatctc
     1801 acctgtaatc tgtacggcta attctctagt tggtgcaagt atcaatgcct gtattccacg
     1861 ttttggaata atgttctgaa taataggcaa ggagaaagct gcagtcttac ccgttccagt
     1921 atgtgcttgt cctatgacat cttgacctga taaaagaata ggtattgccg cggcttgaat
     1981 aggaaacgct tcacgaaaat ttatctcagt tagcgctgtt agtattggat tttttatccc
     2041 taattcttca aattttgtca actttgttca tcatcttttt atcgaaatga cagagaa
//
LOCUS       DASPUS010000010         6894 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1650980, whole genome shotgun sequence.
ACCESSION   DASPUS010000010 DASPUS010000000
VERSION     DASPUS010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 6894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6894)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6894
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1650980"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            49..216
                     /locus_tag="VEJ68_00225"
                     /pseudo
     CDS             49..216
                     /locus_tag="VEJ68_00225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963925.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
     gene            complement(253..858)
                     /gene="hisH"
                     /locus_tag="VEJ68_00230"
     CDS             complement(253..858)
                     /gene="hisH"
                     /locus_tag="VEJ68_00230"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HXX05229.1"
                     /translation="MVKVAIFDYGAGNIFSLKSSLEKNDAEVDVITNLEKIKGYSGLL
                     LPGVGNFDPAIKSLSSSKVEFQDVVKNSLPVLGICLGMEMFFEKSEEGKLSGLGILDG
                     EVILLPNKSKIPHMGWNDLQIKKPSLLLDGVKNGSWVYFVHSYRAKPKNNEIVKADSD
                     YGISVPAVIENGTLYGTQFHPEKSGKVGAIMIKNFLRTCKK"
     gene            complement(858..1445)
                     /locus_tag="VEJ68_00235"
     CDS             complement(858..1445)
                     /locus_tag="VEJ68_00235"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase"
                     /protein_id="HXX05230.1"
                     /translation="MKSRIGRIIRKTKETEVSVIVNLDGNGKISVKTGLPFLDHLISS
                     LAKHAMFDLKLNAVSKDGIDHHLVEDSAIALGNAIDESLGNRVGIVRFGYASVPMDES
                     LAESSLDLVKRQYHQIKLSITRNQIEGISKEDLEHFFRSLAQSLNSCIHISVKYGEND
                     HHKIEAAIKAFAVAWRTAASIDKKQKGIPSTKGVM"
     gene            complement(1470..2456)
                     /locus_tag="VEJ68_00240"
     CDS             complement(1470..2456)
                     /locus_tag="VEJ68_00240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HXX05231.1"
                     /translation="MTLKKIDKGIFVDAPKISSVGKVDGIIFDCDGVLIDVTNSYDLA
                     IKKTVDFIINKMASLNEQNIVTTKMIDGFKASGGFNDEVDVTYALILSTVAARKLNKS
                     FSEFVNEVISKSDQTGIKSVEHFLDSLKVDLSDIRNKLVYPGKRFENPLSSIFDEMFY
                     GAELYTKLYNKKPNFFNRKGLIENDKMLIDKNLLDELHKKFKNNISIVTGRGLISASH
                     SLKDLFQEFNIKNSKFLEDEPREMAKPNPQSLISSIRGMGTTYTIFVGDSTEDFLMAH
                     ETAKKGISVIFCGVYGTSKDPASKMALFQEKGADIVVESVTLIPKTLNLVGI"
     gene            complement(2453..3523)
                     /gene="hisC"
                     /locus_tag="VEJ68_00245"
     CDS             complement(2453..3523)
                     /gene="hisC"
                     /locus_tag="VEJ68_00245"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HXX05232.1"
                     /translation="MKKSWFEKKVENFSKLSGYKKPEKYSNVIKLDSNENYAVSTDFF
                     QSLIDKTKEKMDVREYPLGGTERLVQAISDYINLPKEMIGVGNGSDQIIDLILANFAS
                     KETKILTSEPTFGFFEERCKLYSIPTIKIPFDSNMSLDYEKFLANSKKADILYLDSPN
                     NPTGFQFQRKQLEKLIHAFNGLIIMDEAYVEFADYSITDLTKKINNLVVLRTLSKSFG
                     LAGLRIGYFVTAKKTIDAFTRVIQYPYPLNSVAIEIGILALKQSGYIKEVLELVKKER
                     TRIIEKLREMKVFKVFDSKANFVLFAADGASQRIQKALIEQGIVIKNLGRIGKHEGCL
                     RVTVGSQEMNSRFLTAIRDLLN"
     gene            complement(3520..4791)
                     /gene="hisD"
                     /locus_tag="VEJ68_00250"
     CDS             complement(3520..4791)
                     /gene="hisD"
                     /locus_tag="VEJ68_00250"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HXX05233.1"
                     /translation="MKIITVRDIDSTLESVRPKPNKELKQQVFSIISNVQSRGDSALR
                     EYEKKFSKVNLRSFKVSKTEIKTAYSQVSQEQIKAIKIAKNRLEKSENAVKKQLRNIS
                     LTNEGVKINKIFSPIDSVGCYIPGGKARYPSTVVMSVTPAKVAGVKKIIAVSPANQTG
                     IIDPLTLVAADICGVDEFYKISGAQAIAALSYGTKSIPKVDKIVGPGGAFVTTAKSIL
                     SDVVSIDMIAGPTEIAIIGDSLANPDFVALDLISQAEHSVDTICCLITSSRKLKEQVI
                     IALQKKMKGLKRSDIVKQSLQKNGFIAMCKDEEQIIQFTNKLAPEHLEIMTKNPNNMA
                     GKITSAGLTLIGKNTPSSASDYLLGSNHILPTNSFGRTRGSLGVLDYLKIQTKIEASK
                     TTLQKISKYLNALTDAEGLPNHYEAVKGRLI"
     gene            complement(4791..5768)
                     /gene="hisG"
                     /locus_tag="VEJ68_00255"
     CDS             complement(4791..5768)
                     /gene="hisG"
                     /locus_tag="VEJ68_00255"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HXX05234.1"
                     /translation="MAIVKFAVPKGSIEESTFKILEKSWTKVTRRERTYRVILDDPQI
                     SVKMLRPQEIPNLVSDVLYDVGITGRDWVQETKSDVDILLDLEFGRIKLVIAIPDSYH
                     FKSLDEMIMAYAKKKKILRISSEYLTTAAKFIMQCKSYKKLYGTKEPLIVTPWIRLGS
                     NKNVQIFLSFGATEAKPPEDVDAIMDVTETGTTLTQNQLKIIDTVMESTAVLIANKAS
                     LKDKTKREKIFDIVTMLHGAVEGKKHLHIFLNVKEENLNKLLKELPSLKRPTISPLSE
                     KGWYGINTVIPKSEFHKLIPKLRKIAQGLVVHEPKQILALEEIKRDEES"
     gene            complement(5806..>6894)
                     /locus_tag="VEJ68_00260"
     CDS             complement(5806..>6894)
                     /locus_tag="VEJ68_00260"
                     /EC_number="1.1.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004420 - hydroxymethylglutaryl-CoA
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0016054 - organic acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA reductase,
                     degradative"
                     /protein_id="HXX05235.1"
                     /translation="TLSFPLGIATNFKINGKDYLIPMVIEEPSVIAAASKAAKIARKN
                     GGFKMKADASYSIGQIQVVGVNARSSIQKIMKASRKIITLANSKSKTLSKMGKGAKKI
                     SCKKVKTNSGIMLVVELLIDVGDAMGANVTNTMCEGVAPLIEQLTGGRVILKILSNYS
                     TKRLVKGKAVFDKDEIGGEEVVDNILLAYEFAANDTYRAVTHNKGIMNGIISVANSTG
                     QDTRAIEAAAHAYASRNGKYTSLTNWTKDRKGNLVGEIELPMSVGTIGGIINVHPMIK
                     ICNKILGVKSAKELACVIGAVGLAQNFSAIRALSSEGIQKGHMKLHAKNIASSAGIPQ
                     SKIPHVISRMIKEGNVSVTRAKEILKEL"
BASE COUNT         1928 a         1306 c         1119 g         2541 t
ORIGIN      
        1 aaaggttggg gctataatga ttaagaactt tttgcggacg tgcaaaaagt gaaagttatt
       61 ccagctattg accttatgga aaataatgta gtgcgcttgg tcaaaggcga cccaaagaat
      121 aagacaattt acagtgacaa tccaatcgaa tcagcaaaaa aatgggaaaa aggaggagca
      181 gatatgttac atgttgtaga tcttgacgct gcactacatt attttccata aggtcaatag
      241 ctggaataac tttcactttt tgcacgtccg caaaaagttc ttaatcatta tagccccaac
      301 ctttcctgat ttttcaggat gaaattgtgt accatataga gttccatttt caatcactgc
      361 aggtacgctt attccatagt cagaatctgc ctttacaatt tcattatttt tgggtttagc
      421 tctgtatgaa tgaacaaagt atacccatga accattcttt actccatcaa gaagtaaact
      481 tggttttttt atctgtagat cattccatcc catatgcgga attttggatt tgtttggaag
      541 tagaattact tcaccatcta atattcccaa tccactcaat tttccttctt cgcttttttc
      601 aaaaaacatt tccattccta agcatatacc taaaactggt agactatttt ttactacatc
      661 ttgaaattca actttggacg aactaagact cttaatcgct ggatcaaagt ttcctacacc
      721 gggaagtaga agccctgagt atccttttat tttttcaaga ttagtaatca catctacctc
      781 agcatcattt ttttccagtg aggattttag actaaatata ttgcctgctc cataatcgaa
      841 aattgctacc ttgaccacta cattacacct tttgtactag gtatgccctt ctgtttcttg
      901 tctatactag ctgcagttct ccatgcaact gcaaatgctt tgatggcagc ttcgatcttg
      961 tgatgatcgt tttctccata ttttacagat atgtgtatac aactgttcaa gctttgagct
     1021 agagatctga aaaagtgttc taaatcttct tttgatattc cttcaatttg gttgcgagtt
     1081 atagacaatt ttatttgatg atactgtctt ttcactaggt ctagagagga ttctgccagg
     1141 gattcatcca taggtactga cgcataacca aatcttacaa tcccaactct atttcccagt
     1201 gattcgtcaa ttgcatttcc caaagctatt gcagaatctt cgactaggtg gtggtcaatt
     1261 ccatcttttg aaactgcatt aagtttaaga tcaaacattg catgtttagc tagtgagctt
     1321 atcaagtgat caagaaatgg taagccagtc tttacagaaa tctttccatt tccatccaaa
     1381 tttactatta ctgatacctc agtttcctta gtttttctaa taatacgacc aatccttgat
     1441 ttcattaaat ccccacgcag agaaggtgat tatatcccaa ctagatttaa tgtcttcgga
     1501 ataagagtca cagattctac tacaatgtct gcaccttttt cctgaaacaa cgccattttg
     1561 gaagcaggat ctttacttgt tccatagaca ccacaaaaga tgacacttat accttttttg
     1621 gcagtttcat gtgccataag aaagtcttct gtagaatcac ctacaaagat tgtgtaagtt
     1681 gtacccattc ctctaatgga tgatatcaat gactgtggat ttggttttgc catctcacgt
     1741 ggttcatcct ctagaaattt tgaattcttt atattgaatt cttgaaacaa atccttcaag
     1801 gaatgactag cagatatcaa tcctcgacca gttactatag aaatattgtt tttaaatttt
     1861 ttatgaagtt cgtctagaag atttttgtct attaacattt tatcattttc aatcaatcct
     1921 tttctgttaa aaaaattggg ttttttatta taaagttttg tgtaaagctc tgcaccataa
     1981 aacatttcat cgaagataga agagagtggg ttttcgaatc tttttccagg gtaaacaagt
     2041 ttgtttctaa tatctgataa atcaaccttt aatgaatcaa gaaagtgttc tacagatttt
     2101 atgcctgttt gatcggattt tgaaataact tcatttacaa attcagaaaa tgatttgttc
     2161 aattttcttg ctgcaacagt tgaaagtatc aatgcatagg ttacatcaac ttcatcatta
     2221 aatcctccac tagctttgaa tccatcaatc atttttgtgg taacaatatt ttgctcatta
     2281 agagaagcca ttttatttat gataaagtca acagtttttt ttattgcaag atcataggaa
     2341 tttgtgacat caattaaaac accatcacaa tcaaatatta ttccatcaac cttaccgaca
     2401 ctgcttattt ttggagcatc aacaaagata cctttatcaa ttttttttaa agtcaattca
     2461 acagatcacg tattgctgta agaaacctag aattcatttc ctgagaccca actgttactc
     2521 gtaaacatcc ctcgtgtttt ccaatccttc cgagattttt tatcactata ccttgttcga
     2581 ttagtgcctt ttgaattcgt tggcttgccc catcagcagc aaatagcaca aaatttgctt
     2641 tggagtcaaa taccttgaat accttcattt ctcgaagttt ttctataata cgtgttcttt
     2701 cctttttaac taattctaat acttccttaa tgtatcctga ttgttttaaa gctagaattc
     2761 caatctctat tgctacactg tttaacggat atggatattg aatcactcta gtaaatgcat
     2821 ctatagtttt ctttgctgtt acaaagtatc caattcgaag tcctgcaaga ccaaatgatt
     2881 ttgataaagt tctaagaaca acaagattat tgattttctt tgtcagatca gttatagaat
     2941 aatcagcaaa ttcgacatat gcttcatcca ttataatgag accattaaag gcgtgaatca
     3001 gtttttcaag ttgttttctt tgaaattgga atcctgtagg attatttggt gaatctagat
     3061 acaaaatgtc agcttttttt gaatttgcca gaaatttttc ataatcgaga ctcatattgc
     3121 tgtcaaatgg aatttttatg gttgggatgg aatatagttt acacctctct tcaaaaaatc
     3181 cgaaggtagg ttcagaagta agaattttgg tttctttaga cgcaaagtta gcaagtataa
     3241 gatcaattat ttgatctgaa ccattaccta caccaatcat ttcttttggt aggttaatgt
     3301 agtctgaaat tgcctgaact aacctttctg tacctcctaa tggatattct cgaacatcca
     3361 ttttctcttt agttttatct atcagacttt gaaagaagtc agtagaaaca gcataatttt
     3421 cgttggagtc taatttgatt acattagagt atttttctgg ttttttgtat ccactaagct
     3481 ttgaaaaatt ttcgactttt ttttcaaacc aacttttttt catatcaatc tacctttgac
     3541 agcctcataa tgatttggaa gtccttcggc atctgttaat gcgttcaagt atttggagat
     3601 tttttgtaga gtagtttttg atgcttcaat tttagtctgt attttcaagt aatccagaac
     3661 acccagtgaa cctctagttc gtccaaagct gtttgtaggc aatatatgat tggaacctag
     3721 tagataatca cttgctgaag aaggtgtatt tttgcctata agggtgagtc ctgctgaggt
     3781 aattttgccg gccatgttat ttgggttttt agtcatgatt tccaagtgtt ctggtgcaag
     3841 tttgtttgta aactgaatta tctgttcttc gtctttacac attgctatga aaccattttt
     3901 ttgtagactt tgcttaacaa tatcagatct tttcagtcct ttcatttttt tctgaagcgc
     3961 aattataacc tgttctttca attttctaga tgatgttatc aagcagcaaa ttgtatcgac
     4021 actgtgttct gcttgtgaaa ttagatcaag tgctacaaaa tcaggatttg ccaaagagtc
     4081 acctataatt gcaatctctg ttggacctgc aatcatatca atagaaacaa catcacttag
     4141 aattgacttt gcagttgtaa caaatgctcc gccaggaccg actattttgt caacctttgg
     4201 aatagattta gtaccataag ataatgctgc aatagcttgc gctccactta ttttgtagaa
     4261 ttcatctacg ccacaaatgt ctgcagctac taaggttaaa gggtcaatga tacctgtttg
     4321 atttgcaggt gaaactgcta tgatcttctt cactcctgca actttggctg gagttaccga
     4381 cataactaca gtgcttggat atcttgcctt tcctcctgga atataacagc ctacgctatc
     4441 tattggagaa aaaatcttgt ttatctttac tccttcattt gtaagtgata tgttacggag
     4501 ttgttttttt acagcgttct cagatttttc taatctattt tttgcaatct ttattgcttt
     4561 gatctgttcc tgcgaaactt gagaatatgc agttttgatc tcagtttttg aaactttgaa
     4621 ggaacgtaaa ttaactttgc tgaatttttt ctcgtattct cgaagtgcac tatcacctct
     4681 agattggacg ttggagatga ttgaaaacac ttgttgcttt aattccttgt ttggcttagg
     4741 cctcacggat tctaatgtag aatctatgtc tcgaactgtt atgattttca tcaactttcc
     4801 tcatcacgtt ttatctcctc aagcgctaga atctgttttg gttcatgaac taccagacct
     4861 tgagcaattt ttcttagttt tggaataagt ttgtgaaact ctgattttgg aattacagtg
     4921 tttattccat accagccttt ctcactcaag ggacttattg taggacgttt tagagatgga
     4981 agttctttta gcagtttatt caagttttcc tctttcacat ttaggaatat gtggaggtgt
     5041 tttttgcctt caactgcgcc atgcaacata gtaacgatgt caaaaatttt ttcacgtttt
     5101 gtcttgtctt taagcgatgc tttatttgca atcaagactg cggttgattc cattactgta
     5161 tcaataatct ttagttgatt ttgggttagt gtagtaccgg tttctgttac atccattatc
     5221 gcatcaacat cttctggagg tttagcctca gtggctccaa aagagagaaa tatctggaca
     5281 tttttgtttg aacccagacg tatccaagga gtcactataa gcggttcttt tgttccataa
     5341 agcttcttgt aacttttaca ttgcataata aatttagcag cagttgtgag atactctgaa
     5401 gagattctta gaatcttttt cttttttgca taggccatta tcatttcatc aagtgattta
     5461 aagtgataag aatcgggtat tgcaattaca agttttattc ttccaaattc cagatccaaa
     5521 agtatgtcaa catcagattt tgtttcttga acccaatctc ttccagtaat gccaacatca
     5581 tacaatacat ctgacacaag atttggtatt tcttgagggc gaagcatctt tacagatatt
     5641 tgaggatcat cgaggataac tcgataagtt ctttctcttc gagtcacttt ggtccatgat
     5701 ttctcaagaa tcttgaatgt ggattcttct atgctacctt tagggactgc aaattttact
     5761 atggccacgt agtcctacaa tcttatttgg atatatattt agtcgctata gttctttgag
     5821 tatctctttt gctctagtta ctgagacgtt tccttctttt atcatacgtg aaattacatg
     5881 tggtatcttg ctttgcggaa ttcctgcact tgacgcgatg tttttagcat gaagtttcat
     5941 gtgacccttt tgtatcccct ctgaagacag agctcttatt gcactgaagt tttgtgccaa
     6001 acctactgct cctatgacac atgctaattc tttggcagat tttacaccca aaattttatt
     6061 gcatatcttt atcattggat gtacatttat gattcctcca atggttccca cagacatggg
     6121 caattcaatt tctccaacaa gattcccctt cctatccttt gtccagttag tcagtgaagt
     6181 atacttacca tttcttgatg cataggcatg agctgcagcc tcaattgccc ttgtatcttg
     6241 tccggtcgaa tttgcaactg atattattcc attcataatt cctttgttgt gagttactgc
     6301 tcggtatgta tcatttgctg caaattcata tgccaatagt atgttatcaa cgacttcttc
     6361 tcctccaatt tcatctttgt caaaaacagc tttacctttt accaaccttt tagttgaata
     6421 gtttgataat atcttgagaa taactcttcc tccagttaat tgttcaatta gcggagctac
     6481 tccttcacac atggtattgg tcacatttgc gcccatcgcg tctcctacat caattaagag
     6541 ttcgacaaca agcattatac ctgaatttgt ttttactttt ttgcaggaaa ttttttttgc
     6601 gcctttaccc attttagaaa gcgtcttact cttagaatta gctagagtaa ttattttcct
     6661 tgatgccttc ataatttttt gaatgcttga tcttgcatta acgcctacca cttggatttg
     6721 gcctatgcta tatgacgcat cagctttcat tttaaaaccg ccatttttcc ttgcaatttt
     6781 ggctgcctta gaagctgcag caataacaga tggttcttca atgaccatcg gtatgagata
     6841 gtcttttccg tttattttga aattagttgc gattccaagc ggaaaagaga gtgt
//
LOCUS       DASPUS010000011         2198 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1240463, whole genome shotgun sequence.
ACCESSION   DASPUS010000011 DASPUS010000000
VERSION     DASPUS010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2198)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1240463"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            61..861
                     /locus_tag="VEJ68_00265"
     CDS             61..861
                     /locus_tag="VEJ68_00265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007403187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2 subunit
                     alpha"
                     /protein_id="HXX05236.1"
                     /translation="MATTIQNFPEVGEIVIATVTRIMDQGAYVTLDEYNNIQGFLHIS
                     EIATGWIRNVEKFLKVGEKKVLLVKRVDPRRSEIDLSLKQISTDQKKKKLLELKRHEK
                     ETVLIENLKTKSGLSESEIDKIENVLVEKFGSVYDAFSEVAVKGISILSNLGISSKAI
                     GVIEEQSSKIQIPSVEIRGVMELTCNKSNGVEIIKKALLDAIENKKVNVSVTYIGAPK
                     YRLSIVAQNFKDAEKELKPLVSSVEDTIHKNGGTFKFTREESKKTREG"
     gene            864..1019
                     /locus_tag="VEJ68_00270"
     CDS             864..1019
                     /locus_tag="VEJ68_00270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-protein complex protein Nop10"
                     /protein_id="HXX05237.1"
                     /translation="MKFQLRKCINCKRYTLKEECPRCRNATVSVHPGKYSPDDKYARY
                     RVSDRYK"
     gene            complement(1024..>2198)
                     /locus_tag="VEJ68_00275"
     CDS             complement(1024..>2198)
                     /locus_tag="VEJ68_00275"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HXX05238.1"
                     /translation="SVIASWWDYGYWIQTLGGRITIVDNATVDTNTIAKMARMFLSSP
                     DDSWKMLRDMGANYVLIYVVGQKFVSNGQELYILGGGGDESKKQWFMRIAGEDTSTFL
                     QDDGFTPTNYFWENTMLGKMFPFTPLTYYDPNTHAESQTYQTGYTAVYAKAIKYPENG
                     NGPLRLVYTSSSLNRTSSGVFSAVLLYQINPDYIQQTNQTQQTTPSQQTSPQINQTSS
                     SAPSGDTATIDTKFGNITIKLLDNVAPKTVSNFEKLANSHFYDGTIFHRIVPGFVIQG
                     GDPNTKNGSRNTWGTGDAGYTIPPEFSSMSFSKYTVGMARGQDVNSGSSQFFITVGDA
                     SFLNGQYTLFGQVISGQDVVDKIASLPADSTTNQPNNPEDARINTIAISSGSNSTK"
BASE COUNT          741 a          382 c          424 g          651 t
ORIGIN      
        1 aaaaaaaggc attgatttct aagcaacaac attaaattat gtagcaaaaa cctgaaagtc
       61 atggcaacaa ccatacagaa ttttcccgaa gttggtgaaa tcgtaattgc tactgtcaca
      121 aggataatgg atcagggtgc ttatgtgact ctcgatgaat acaataacat tcaaggattc
      181 ttgcacatat ctgagatcgc aaccggatgg ataagaaatg ttgaaaaatt tctaaaagtt
      241 ggagaaaaaa aagtacttct tgtaaaacgt gtagatccta gacgatctga aatagattta
      301 tcattaaaac aaatttcaac agatcaaaag aaaaagaagc ttttagaatt aaagcgtcat
      361 gaaaaagaaa ctgtattaat tgagaattta aaaacaaagt caggtctttc tgaatcagaa
      421 attgataaaa ttgaaaatgt gttggtggaa aagtttggat ctgtatatga tgcattttct
      481 gaagttgcag tcaaaggaat ttccatttta agtaatctag gtatttcatc aaaggccata
      541 ggtgtcattg aagagcagag ctcaaagatc cagattccca gtgtagaaat aaggggagtc
      601 atggaattga catgtaacaa atctaatggg gtggaaataa tcaagaaagc actacttgat
      661 gcgattgaga acaagaaggt aaatgtatca gtaacctaca ttggtgcgcc aaaatatcgt
      721 ctaagtatcg ttgcacagaa ttttaaggac gctgagaagg aactaaagcc cctcgtttct
      781 tctgttgaag atacaattca taaaaatggt ggaaccttca aattcacaag agaagaatct
      841 aaaaaaacac gtgaagggta aaaatgaaat ttcaactacg caagtgtatc aactgcaaga
      901 gatatacttt gaaagaagaa tgtccaaggt gtagaaatgc aacagtaagt gtgcatccgg
      961 gaaaatattc tccagacgat aaatatgcca gatatcgagt ttccgacaga tacaagtgac
     1021 gttttattta gtactgtttg aaccagatga tatagctatt gtgtttatac gtgcatcctc
     1081 aggattattg ggctgattgg tagttgaatc agccggcaat gatgctattt tatcaacaac
     1141 atcttgtccc gaaatgacct gaccgaacaa agtgtattgc ccattcaaaa atgatgcatc
     1201 acccactgta ataaaaaact gagagcttcc actatttaca tcctgaccac gagccattcc
     1261 aactgtatat tttgagaaac tcatggaact aaattctgga ggtatggtgt aacccgcatc
     1321 acctgttccc catgtgtttc ttgagccatt ctttgtattt ggatcaccac cctgaataac
     1381 aaatcccgga actattctgt gaaatattgt tccatcatag aaatgtgaat ttgcaagctt
     1441 ttcaaagtta gatacagtct tgggtgcaac gttatcgagt aattttatgg ttatattacc
     1501 aaattttgta tcaattgtag cagtatcacc tgaaggagca gaactactag tttggttaat
     1561 ttgcggagag gtttgttgtg aaggggtagt ttgctgtgtt tgattagtct gttgaatata
     1621 atctggattt atctgataga gtagaaccgc tgagaatact ccagaactag ttcgattcag
     1681 actggatgat gtatatacaa gtcttagagg cccattacca ttttcaggat attttattgc
     1741 ctttgcatat actgctgtgt aaccagtttg atatgtctgt gattctgcgt gagtatttgg
     1801 atcatagtaa gttagtggag taaatggaaa catcttaccc agcatagtat tttcccagaa
     1861 atagtttgta ggggtaaacc catcgtcttg taagaatgta gatgtatcct ctcccgcaat
     1921 cctcatgaac cattgtttct tgctctcatc tccacctcct ccaagtatat acaactcttg
     1981 accgtttgaa acaaattttt gtcccactac ataaattaga acataatttg cacccatatc
     2041 tcggagcatc ttccaagaat cgtcagggga actaagaaac atcctagcca tttttgcgat
     2101 agtatttgta tcaacggttg cattatcaac aatagttatt ctacctccca aggtctgtat
     2161 ccaatatcca tagtcccacc aagaagcaat aacagaat
//
LOCUS       DASPUS010000012         2284 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_967129, whole genome shotgun sequence.
ACCESSION   DASPUS010000012 DASPUS010000000
VERSION     DASPUS010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2284)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2284
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_967129"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..202
                     /locus_tag="VEJ68_00280"
     CDS             <1..202
                     /locus_tag="VEJ68_00280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sodium/proton-translocating pyrophosphatase"
                     /protein_id="HXX05239.1"
                     /translation="GAWDNAKKYMEINKQKGTEEHKIAIVGDIIGDPYKDTAGPALNT
                     VIKLLNTVAIVFVSAFIAIVVL"
     gene            complement(199..399)
                     /locus_tag="VEJ68_00285"
     CDS             complement(199..399)
                     /locus_tag="VEJ68_00285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008297448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05240.1"
                     /translation="MNKKSTYSKLTVEGEIQTRWICGCFETIDGFFKFCPQHTEAMKR
                     TIESQIDELDMTIVVDEKDSTT"
     gene            complement(466..723)
                     /locus_tag="VEJ68_00290"
     CDS             complement(466..723)
                     /locus_tag="VEJ68_00290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2024 family protein"
                     /protein_id="HXX05241.1"
                     /translation="MEIHVYDTYVEAKDGHTMHFDVITNVKDHQKAILFAKEWLNTVG
                     EGNAQVTTEECQFCHSQGAPEPIANEIQRKGYFIQKMEGCP"
     gene            777..1169
                     /locus_tag="VEJ68_00295"
     CDS             777..1169
                     /locus_tag="VEJ68_00295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclophilin-like fold protein"
                     /protein_id="HXX05242.1"
                     /translation="MIHKVIIDLPNLRKISLELDDNIAPKTVRSFLDSLPLKVGMNIW
                     GEELYTDETLIKVGPENSKALVELMDVAYWPPGKAICLFFGPTPIGKSDEIRPYSEVN
                     VIGKIVDRDKRFLKNVSNGLQVKFELLK"
     gene            complement(1331..1744)
                     /locus_tag="VEJ68_00300"
     CDS             complement(1331..1744)
                     /locus_tag="VEJ68_00300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M67 family metallopeptidase"
                     /protein_id="HXX05243.1"
                     /translation="MTLQPEIVFSKNHIDTLRKHAKEKEPNESCAILFGKNENSRFIT
                     KDVFLTDNVEQSPVSFTISNDDLIKAYEYAEKNGLEIIGIFHSHPDSAAYPSGTDQKY
                     METNPVPWIIFSNITDEFRGYILESAVIPIVVTVL"
     gene            complement(1741..>2284)
                     /locus_tag="VEJ68_00305"
     CDS             complement(1741..>2284)
                     /locus_tag="VEJ68_00305"
                     /inference="COORDINATES: protein motif:HMM:NF012355.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="plastocyanin/azurin family copper-binding
                     protein"
                     /protein_id="HXX05244.1"
                     /translation="IKGNPSFTPNTITVPQGDIIKWTNDDKVPHTVTNAPDGAVFDSS
                     LISAGKSFSLDTSKLNATEYDYMCTVHPFMTGKIIISKPQTANVSISNGASKQSAGQK
                     YFDPPALSVKVGTTVTWTNNDGVAHTVTSGDPSAGPSGTFDSSLIKPGQTFKYSFTSA
                     NATSYFCTVHPWMTGKVTAG"
BASE COUNT          661 a          419 c          449 g          755 t
ORIGIN      
        1 aggcgcatgg gataatgcta aaaagtatat ggaaattaac aagcaaaaag gaactgaaga
       61 acacaagata gctattgtcg gagacataat aggcgatcct tacaaagaca ctgcaggtcc
      121 tgctcttaat accgtgataa agctcctaaa cacagtggca atagttttcg tctctgcctt
      181 tatagcaata gtagtcctct aagtcgtaga atctttctca tctactacta tggtcatgtc
      241 aagttcatca atctgggact ctatggttct cttcatggct tcggtatgtt gtgggcaaaa
      301 tttgaagaaa ccatcaatgg tttcaaaaca accacagatc catctagtct gtatctcgcc
      361 ttctacagta agtttgctgt aggtactttt tttgttcaca aattaaaata atacagatta
      421 ctctaaaaag agtttgcaaa aatagtaaag agataaaaaa attagctacg gacagccttc
      481 cattttttgg ataaagtatc cttttcgctg gatctcattg gcaattggtt ccggtgcgcc
      541 ttgagaatgg caaaactggc actcttctgt cgtgacttga gcatttcctt cgcctactgt
      601 atttagccat tcttttgcaa acaggattgc cttttgatga tctttgacat ttgttatgac
      661 gtcaaaatgc atcgtgtgtc catcttttgc ttccacatac gtatcgtata cgtgaatttc
      721 catattttca atggataaat aaccattatt tattctaact cactctagtt tttattatga
      781 ttcacaaggt aatcatcgat cttccaaatc taaggaagat cagcctagaa ttagatgaca
      841 acattgctcc caagacagtt agatcgtttc ttgattctct gccattaaaa gtggggatga
      901 acatatgggg cgaggaactt tacacagatg agactctaat caaagtaggt cctgaaaatt
      961 ctaaggcact agttgagttg atggatgtag catactggcc tcccggaaag gcgatctgtc
     1021 tcttctttgg acctacacca attggtaaaa gcgatgagat aagaccatat tctgaagtaa
     1081 atgttattgg aaagattgta gaccgcgata aaaggttctt aaaaaatgtc tcaaatgggc
     1141 tccaagttaa atttgagctt ctcaagtaat aatgccatat ttggttatct aggatcatct
     1201 ttttacacaa gttattacct ctagtacccg ttgtttagcc aaaagacgga gataaggtgc
     1261 aaggactgca acgcaacatt tgtagataaa gaacactttg agagacacaa gaagaatata
     1321 cactaatgtc ctagagcact gtcacaacaa taggaataac tgctgattct aagatataac
     1381 ccctaaactc atcagtaata ttggaaaaga ttatccaggg aactggattt gtctccatgt
     1441 atttttgatc cgtaccagat gggtatgctg ccgagtcagg atgtgagtga aaaattccaa
     1501 taatttctaa cccgttcttt tctgcgtatt catatgcttt tatcagatca tcgtttgata
     1561 tggtaaagct tactggtgac tgttcaacat tgtcggttag aaatacatct tttgttataa
     1621 agcggctatt ctcgtttttg ccaaacaaga tggcacatga ttcatttggt tccttttctt
     1681 ttgcgtgttt tctaagagta tctatgtggt tttttgaaaa gactatttct ggttgtaatg
     1741 tcatcctgct gttacttttc cagtcatcca aggatgaact gtacagaagt aagatgttgc
     1801 gttcgctgat gtgaagctgt atttgaatgt ctgacctggt tttattagac ttgaatcaaa
     1861 tgttcctgac ggtcctgcac ttgggtcacc gcttgtaacg gtatgagcaa ctccatcatt
     1921 gttggtccat gttaccgttg taccaacctt tactgagaga gctggaggat caaaatattt
     1981 ttgtccagca ctttgttttg atgctccgtt tgaaattgat acatttgcag tttgcggttt
     2041 actgatgatt attttaccag tcataaatgg atgtactgtg cacatgtaat catattctgt
     2101 tgcattcaac tttgatgtgt caagtgaaaa tgatttaccg gctgagatta ggctggaatc
     2161 aaacactgca ccatctggtg cattggttac agtatgaggt accttgtcat catttgtcca
     2221 ttttattatg tcaccttgtg gtactgtaat agtatttgga gtaaagctag gatttccttt
     2281 tatg
//
LOCUS       DASPUS010000013         2608 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1652823, whole genome shotgun sequence.
ACCESSION   DASPUS010000013 DASPUS010000000
VERSION     DASPUS010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2608)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2608
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1652823"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..152)
                     /locus_tag="VEJ68_00310"
     CDS             complement(<1..152)
                     /locus_tag="VEJ68_00310"
                     /inference="COORDINATES: protein motif:HMM:NF014015.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HXX05245.1"
                     /translation="MKLCALFSGGKDSTFAIYQARLDGHEIVCLVTVYPRSEDSHLLH
                     YPNIGIT"
     gene            complement(416..823)
                     /locus_tag="VEJ68_00315"
     CDS             complement(416..823)
                     /locus_tag="VEJ68_00315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-5A"
                     /protein_id="HXX05246.1"
                     /translation="MSKPSELGSLKIGSYILLPVDSPTAEPCKIVEFDTSKPGKHGAA
                     KARIVAVGIFDKKKYPHVSPVSAQVQVPLIDKRVGSVISKTDTIVQVMDSETFEVFDV
                     SQIEDEIKDKISQGQDVEYWKVMDRTIIVRIKS"
     gene            complement(859..1470)
                     /locus_tag="VEJ68_00320"
     CDS             complement(859..1470)
                     /locus_tag="VEJ68_00320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05247.1"
                     /translation="MSGSEVSRGGYICAPYLHNDSSSKLKETLEKSEYIDDLYFVTAS
                     FSEDGSAYFPLRTNTYLLARFNNPNQTMKDIDKFKQDRPTFVFTKNDEFFERLSDQRL
                     NLISVYYLEYGHSEGDLFELASIVAKRNRVRRAESGHLKLSSTESPKFTFPYGDNLIV
                     FEVSSDNTHQSDNKYCEKTRKEVARKGIRLTNLLNLSVIEKIK"
     gene            1605..1727
                     /locus_tag="VEJ68_00325"
     tRNA            join(1605..1642,1689..1727)
                     /locus_tag="VEJ68_00325"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1639..1641,aa:Tyr,seq:gta)
     gene            1766..2272
                     /locus_tag="VEJ68_00330"
     CDS             1766..2272
                     /locus_tag="VEJ68_00330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AsnC family transcriptional regulator"
                     /protein_id="HXX05248.1"
                     /translation="MSDDQNWSTLDEVDQKIIAILNKNARTPSKEIASELRNAGVDVS
                     DRTIRKRIERLEKNGIIKGYKAVLSGVSETDEFEALFLKLKITRSISNLLGSVKSFVK
                     TFPNYLFVATLDGDWNMIIVMRLDGSEKNPTSKVIEKFSEQISDYRISNIQIKDVNLL
                     NMSLLLLS"
     gene            complement(2265..>2608)
                     /locus_tag="VEJ68_00335"
     CDS             complement(2265..>2608)
                     /locus_tag="VEJ68_00335"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HXX05249.1"
                     /translation="RLQNYLQQLGYDDIRTIDNGQGAIKLITKLIKTSQNPIILLDMD
                     LPDLSGDIVARKLLQTKPNLSIILITADEKTTPRVRKTIGFGSTAFIQKPFTINELKI
                     ALEATRLTEVN"
BASE COUNT          794 a          479 c          464 g          871 t
ORIGIN      
        1 gtaatgccta tgtttggata atgtaagaga tgactatcct cggatcttgg atatactgtt
       61 acaaggcaaa ctatttcatg gccatctaac cttgcttgat agatggcaaa agtactatcc
      121 ttgcctccag aaaaaagtgc acaaagtttc aattcgacct taagaagtta tcatttaatt
      181 aatttttttc tagttgactt actcggttta gacattttcc acatagagca aggctatctt
      241 ttatcgcaat ctcaacgttt gacgccagac atatgtgaca gagacccttc acatcaaatg
      301 taaacatatt atcatgtata actccttcga ggattagaaa agcctggatg cttcaatact
      361 cataatcttc atcattatat cagttggctt ttctcatcat catcagcatc cacatttagc
      421 ttttaatgcg tactataata gttctatcca ttactttcca gtattcaacg tcttgaccct
      481 gagaaatctt atccttgatc tcatcttcaa tctgagatac gtcgaatacc tcaaacgttt
      541 cagagtccat gacttgtact attgtatcag tttttgatat aaccgatccc actcttttat
      601 caatgagagg tacttgaact tgtgcactta caggcgagac atgaggatat tttttcttgt
      661 caaagattcc aactgctact attcttgctt ttgcagcacc atgttttcca ggtttgctgg
      721 tatcaaactc tacaattttg catggttctg cggttggact gtcaacaggc aataagatgt
      781 aggaaccaat ctttaaagaa ccgagttcag atggtttact catcaccaga aaagaatttg
      841 gtagagtata taacttttct atttaatttt ttcaatcaca gataaattta gcaagtttgt
      901 tagtcgaatt ccttttcttg caacttcctt tcttgtcttt tcacaatatt tgttatcgct
      961 ctgatgagta ttgtcgcttg atacttcaaa tacaattaag ttatctccgt atgggaaagt
     1021 aaacttgggc gattctgtag aagagagttt gagatgccca gattctgctc ttcttaccct
     1081 attgcgtttt gctacaattg aagcaagctc aaagagatcg ccttcggaat gaccatattc
     1141 taaataataa acagagatta ggtttagtct ctgatcgctc aacctttcaa aaaattcatc
     1201 gttctttgtg aaaacaaagg ttggcctatc ttgtttgaat ttatctatat ctttcattgt
     1261 ttgattggga ttattgaatc ttgcaagaag atacgtgttg gttcttaatg gaaaatatgc
     1321 actgccatct tcagaaaatg aagctgttac aaagtacagg tcgtcaatgt attcagattt
     1381 ttcaagagtt tcctttagct tcgatgaaga atcgttgtgt aaatatggtg cgcatatgta
     1441 ccctcctctt gaaacttccg acccagacac gtgatcggga tcaatatggt ctcttatatg
     1501 taatgtggtt atcctgcaat tttattaaaa tagatttcaa attgtataag cactcctttc
     1561 ctatcgatag ttatttaata cgaaaaaact ggatgagagt cagtcccacg ctagctcagc
     1621 ctggtagagc ttccggctgt agtggttggc cagcggctaa ctgatatcag cctatcaggc
     1681 ttacagaaac cggagtgtcg caagttcaaa tcctgcgcgt gggaccatca taaaattcaa
     1741 aaagacatca tccacaatag tatcattgtc tgatgatcaa aactggtcaa cattggatga
     1801 agtagatcaa aaaattattg caatattaaa caagaatgca agaaccccat caaaagagat
     1861 cgcaagtgaa cttagaaatg caggcgtaga tgtatccgac aggactatac gaaagagaat
     1921 agagagattg gaaaaaaacg gcatcataaa gggctacaaa gctgtcttga gcggcgtctc
     1981 tgaaacagat gaatttgaag cgcttttttt aaaactcaag attacacgtt ctatctccaa
     2041 tcttttagga tcagttaaga gttttgtaaa gacatttcca aattatctct ttgttgctac
     2101 actagatgga gattggaata tgataatagt aatgagatta gatggttctg aaaaaaaccc
     2161 tacgtccaaa gtaattgaaa aattttctga gcaaatctca gactatagga taagcaatat
     2221 ccaaataaag gatgtaaatc tactaaatat gtcgctttta cttcttagtt aacttcagtt
     2281 agtcttgtag cttctagtgc aatttttaac tcatttattg taaacggttt ttgaataaaa
     2341 gctgtagaac caaaacctat tgttttacgt actcgcggtg tagttttctc gtcagccgta
     2401 atcaaaataa ttgaaagatt aggttttgtt tgcaataatt tacgcgcgac tatatctcct
     2461 gacaagtcag gaaggtccat atccaacaat attatcggat tttgagaagt tttgattagt
     2521 tttgttatga gtttaattgc tccttgtcca ttgtctatag ttcgtatatc gtcatatccc
     2581 agttgttgca gatagttttg taacctta
//
LOCUS       DASPUS010000014         2438 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_145134, whole genome shotgun sequence.
ACCESSION   DASPUS010000014 DASPUS010000000
VERSION     DASPUS010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2438)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2438)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2438
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145134"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..349
                     /locus_tag="VEJ68_00340"
     CDS             <1..349
                     /locus_tag="VEJ68_00340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008301060.1"
                     /note="part of four member fumarate reductase enzyme
                     complex FrdABCD which catalyzes the reduction of fumarate
                     to succinate during anaerobic respiration; FrdAB are the
                     catalytic subcomplex consisting of a flavoprotein subunit
                     and an iron-sulfur subunit, respectively; FrdCD are the
                     membrane components which interact with quinone and are
                     involved in electron transfer; the catalytic subunits are
                     similar to succinate dehydrogenase SdhAB; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     flavoprotein subunit"
                     /protein_id="HXX05250.1"
                     /translation="KAYVFRNEKDLAEGLKKVRELRQKTWKHVDDKAKEYNTNFTNVM
                     ELDSMFRVAEVILMGAIWRKESRGAHARIDYPDRDDKNFLAHTLVYYDTKEPVIKTHP
                     VTITKYKPVERKY"
     gene            349..783
                     /locus_tag="VEJ68_00345"
     CDS             349..783
                     /locus_tag="VEJ68_00345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase"
                     /protein_id="HXX05251.1"
                     /translation="MAERLSNREGIKGMANPTRYGIERVAYWLQRLSGLGLLAYLIGH
                     IYETSTIVNGKIAWDKMLALTETSQGHMVLIIVIGMCVFHTGNGIRLMISESGKGLGK
                     PGQPEYPYKASSLNYKQRLCIWVSIALAALAMMYGAAVLFGD"
     gene            785..1129
                     /locus_tag="VEJ68_00350"
     CDS             785..1129
                     /locus_tag="VEJ68_00350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase"
                     /protein_id="HXX05252.1"
                     /translation="MRESIIMKIHYGTALGAVALVAVHILFRMTQKFSDSLQYQNVIA
                     NYHFLPYALMLEVILILLAVHGFNGLRVILLELKQGVAYERAINYGSIAAMAVLIAYG
                     SRTILMAGMGIS"
     gene            1132..1920
                     /locus_tag="VEJ68_00355"
     CDS             1132..1920
                     /locus_tag="VEJ68_00355"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013482941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HXX05253.1"
                     /translation="MATVTVPKEQQAEITPIISTQAISQPKTITLQIARSNPSEGTLP
                     KFDEFKIPVQKWTTVLEAILYVKQNFDHSVAVRYSCRQASCGSCGMKINGKPSLACYT
                     KVSELDSNIITVEPMNNFPIIRDLTVDFKQLFSTHKKMKPFIISEESEITPGTKESIQ
                     TPKDLEKFLQFSYCIKCGLCNSACPTMATDSSFIGPQGLAQAYRYVADNRDKGEKERL
                     KIVDQSHGIWRCHFAGSCSHVCPKGVDPAMAIQMLRGYLLGFGK"
     gene            complement(1928..2248)
                     /locus_tag="VEJ68_00360"
     CDS             complement(1928..2248)
                     /locus_tag="VEJ68_00360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein"
                     /protein_id="HXX05254.1"
                     /translation="MSQASQDLRRQIFDELTKIVDPEINVSIMELELIDNIDINGSDV
                     KVDLHLTSPFCPAIFGFKIAQDVHDNLLKIDNIADVKVNVSNHFMAEAINNQVNSSKN
                     PKKP"
BASE COUNT          833 a          425 c          470 g          710 t
ORIGIN      
        1 aaaagcatat gtcttcagaa atgaaaagga tcttgctgaa ggactaaaaa aggtcagaga
       61 attaagacaa aagacgtgga aacatgtcga cgataaagct aaagagtata atacaaactt
      121 tacaaatgta atggaacttg actccatgtt tcgtgtagcc gaagtaattt tgatgggtgc
      181 aatttggaga aaagagtcta ggggtgctca tgcaagaatc gattatccag atagggatga
      241 caaaaacttt ctcgctcaca ctttggtata ttatgataca aaagaaccgg ttatcaaaac
      301 acatccagtt actattacaa aatacaaacc agtagagagg aaatactaat ggctgaaaga
      361 ctttcaaatc gtgaaggcat caaaggaatg gcaaatccaa ctcgatatgg aatagaacga
      421 gttgcatact ggttacaaag actcagcggt cttggattac ttgcatactt gattggccat
      481 atttacgaaa caagtacaat tgtaaacgga aaaatagcat gggacaagat gttggctctt
      541 acagaaacct cccaaggtca tatggtctta attatagtaa ttgggatgtg tgttttccat
      601 acaggtaatg gtatacgttt gatgataagt gaaagtggaa aaggtttagg aaaacctggt
      661 caacccgaat atccttacaa ggcatcttca ttaaattata agcaaagact ttgcatttgg
      721 gtatcaatag cacttgcagc tttggctatg atgtatggtg cagctgtatt gtttggagat
      781 taaaatgaga gaaagcataa ttatgaaaat acactatgga actgcactcg gagcggtagc
      841 actagttgca gtacatattt tatttagaat gacacaaaaa ttttctgatt ctttgcaata
      901 tcaaaacgtt attgcaaatt atcattttct accatatgct ctaatgctcg aagttatatt
      961 gattctgtta gctgttcatg gattcaatgg attgagagtt atccttttgg agctaaagca
     1021 gggtgttgcg tatgagcgtg caattaatta tggttcgatt gcagctatgg cagtcttgat
     1081 tgcttatggc tcaagaacta tattgatggc aggaatggga atttcataaa aatggcaaca
     1141 gtgacagttc ccaaagaaca acaagcagag ataacaccta tcatctctac acaggcaata
     1201 tctcagccaa aaacaataac tcttcaaata gcaagatcaa atccctcaga gggtacactt
     1261 ccaaagtttg atgaatttaa aataccggtt cagaagtgga ctactgtttt agaggcaatt
     1321 ctctatgtaa aacagaattt cgatcactca gttgcagtca gatattcttg tagacaagca
     1381 tcctgtggct catgtggtat gaagattaac ggaaagccaa gtcttgcatg ctacacaaag
     1441 gtatccgaac ttgactcaaa tattatcacg gttgaaccca tgaacaactt tccaataatt
     1501 agagatctga ccgtcgactt taagcaactc ttttccaccc ataaaaaaat gaaacccttt
     1561 atcattagcg aagaatccga aattacgcct ggtacaaaag aatcaatcca gactccaaag
     1621 gatctggaaa aattcctaca attctcatat tgtataaagt gtgggttgtg taactctgct
     1681 tgtcctacca tggcaacaga tagttcattc atagggcctc agggtttggc acaagcttac
     1741 agatacgttg ctgacaacag ggacaaaggg gaaaaggaga ggctaaagat cgtcgatcaa
     1801 tcccatggga tatggagatg ccattttgct ggctcttgca gccatgtttg tccaaaagga
     1861 gttgacccag caatggctat ccaaatgcta aggggatatc tgctaggatt cggaaaataa
     1921 aaacaatcta aggctttttt ggatttttgc tagaatttac ttgattgttg attgcttctg
     1981 ccataaagtg atttgaaaca ttcactttta catcagcaat attatctatc ttcaacaaat
     2041 tgtcatgaac atcttgcgct atcttaaatc caaatatcgc aggacaaaaa ggacttgtca
     2101 aatgcaaatc tactttgaca tctgatccat tgatgtcaat attatcaatt aattcaagtt
     2161 ccataataga cacattgatt tccggatcaa ctatttttgt aagttcgtca aaaatctgtc
     2221 ttctcaaatc ttgagatgcc tgagacataa attaaaaaag cgtctatgct atatataacc
     2281 attctaattc ctaaattgat gtacagatca aggttagaag gaaagttaga caaagtaaca
     2341 ctagatttta tttcttcaat ctctgacgat tttcaaattg ccttgtatga tattatagga
     2401 agtcaagctc acactttgat gctctttgaa aataaaat
//
LOCUS       DASPUS010000015         4737 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_282526, whole genome shotgun sequence.
ACCESSION   DASPUS010000015 DASPUS010000000
VERSION     DASPUS010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4737)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4737
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282526"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..988)
                     /locus_tag="VEJ68_00365"
     CDS             complement(158..988)
                     /locus_tag="VEJ68_00365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase family
                     protein"
                     /protein_id="HXX05255.1"
                     /translation="MLKQAMASILTLEETEVLFGAFDQIGNIIILRIPDSLLSKKKLI
                     GQVLLEKVKTAKSVFYQSSPVEGDYRIRRLELLAGEDKTETEYKEHGCRFKVDVEKTF
                     FSPRLSTERLRIANLINEGETIINMFGGIGMFSIVAAKMKRCHIYNIDINPYAAKLCS
                     ENILLNKKLKGIIDSLEGDASEIIEKKLSNTGDRILMLLPERSDEFLDAAIKASKEKS
                     ILHYYCHVHSDKKSGVAEEAKKHFMSVMKVKSEILGTRIVRPVGPRFYQVVVDASITK
                     "
     gene            complement(994..2778)
                     /locus_tag="VEJ68_00370"
     CDS             complement(994..2778)
                     /locus_tag="VEJ68_00370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis/translation initiation
                     ATPase RLI"
                     /protein_id="HXX05256.1"
                     /translation="MTHRVAVLDKEACQPKKCGLECIKYCPVNKMGSDCIILNEETGK
                     AQIDENICNGCGICVKVCPFDAITIVNLAEELKADKIHQYGLNSFRLYRIPTLKKGQV
                     MGLLGRNGIGKSTVVNILSGNLKPNLGNYSLPPEWNDILKHFSGTELKSHFEKIANKE
                     LKASIKPQQVYNLAKAFDGTSKELLEKYDERNKISELIQELGLQNSLESRLSELSGGE
                     LQRIAVAVAASREADFYFFDEPSSYNDVFQRMGVAKVIQNLAKLGKSVMVVEHDLTLL
                     DYLSDFIEVVYGEPAAYGIVANVLSTKVGINVFLDGYLPTENVRFRDAAFKFDASTST
                     DEFVTTENIIEYPILEKKFANFSLSIEAGRVRKSEVLGMVGANALGKTTLMKMIAGVE
                     KPDFGSIDTKVKIAYKPQYLTNDYDIEVISLLEKANEGTIDGTTEEELIIHPMKIMKL
                     YNKSVKNLSGGELQKVAIAACLLQKVDLYALDEPSAFLDVEDRIAIAKLIQRFVRSYG
                     KSAIVIDHDIQLMDLISDSLVIFHGIPGREGHATSPKSKADGMNQFLNSLDITYRRDE
                     TSMRPRVNKSESRLDREQKQSGHFYYRN"
     gene            2853..2972
                     /gene="rrf"
                     /locus_tag="VEJ68_00375"
     rRNA            2853..2972
                     /gene="rrf"
                     /locus_tag="VEJ68_00375"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(2975..3232)
                     /locus_tag="VEJ68_00380"
     CDS             complement(2975..3232)
                     /locus_tag="VEJ68_00380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05257.1"
                     /translation="MVKNQRVPKLTFTITPNPNGYVIGCSEIPYLFTDVNSLGDVDKI
                     IRNLLFDYIDRFPDDAKKRGVDRDTLTQTVWRGSPNSVALE"
     gene            complement(3438..3824)
                     /locus_tag="VEJ68_00385"
     CDS             complement(3438..3824)
                     /locus_tag="VEJ68_00385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05258.1"
                     /translation="MENKDLFPIMIYDDSCYYCSKFANIIKTMARKKILIVGQYSKIG
                     IEIKSKIFPKNYDATRMFWFINDKTAYGGRAGILPLLLFILKGKRVRLLPEDLPLTEG
                     NDCRTPEAFFARIKTLLSNSERIILK"
     gene            3951..>4737
                     /locus_tag="VEJ68_00390"
     CDS             3951..>4737
                     /locus_tag="VEJ68_00390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HXX05259.1"
                     /translation="MGLNYYYILKRVRQARKLVIKGTTTAGSGHPGGSFSMAEILGCI
                     YSKFLKYDPKNPLWSERDRLVLSKGHASPGLFSNLAVAGFFDKSEIETLRKFGSRLQG
                     HPDFKCPGVEFCGGSLGLGLSFSIGMALAARLDEKNHHIYTIIGDGESDEGQVWESAM
                     AASKFKLDNLTVLLDRNFIQQDDYTERVMPLDEELVGDDISEMWKNASRWKVGDKWRS
                     FGWNVLEIDGHDFGQIEEAILKSDKAKGKPSVIIAKTIKGKGVS"
BASE COUNT         1395 a          893 c          813 g         1636 t
ORIGIN      
        1 atatcttttg atgctttctc aatggagtcc gatagttctt cagctttcag tacttatggc
       61 cgttggtgga attcttggag taatttcgtg gatcggttat aacatggcaa catccagacc
      121 ttccccctct tcctttgtaa cagatgataa aaagtaatca tttagttatt gatgcatcta
      181 caactacttg ataaaatcta ggacctacgg gtcttactat cctggtccct aatatttcag
      241 atttgacttt cattactgac ataaaatgtt tttttgcttc ttctgcaacg ccactttttt
      301 tatctgagtg aacatggcag tagtaatgca aaatgctttt ctcttttgaa gcctttattg
      361 cagcatcaag aaattcgtcg gatctttctg gcaagagcat aagaattcta tcgcctgtat
      421 tggatagttt cttttctatt atttctgaag catcaccttc caaggagtct ataatgcctt
      481 tcaacttctt gtttagaagg atattttccg aacaaagctt agccgcataa ggattgatat
      541 ctatattata gatatgacat cttttcattt ttgcagctac gatagagaac attcctattc
      601 cgccaaacat attgattatt gtctcacctt cgtttatcaa attggcaatt ctaagacgct
      661 cagttgataa tcttggtgaa aagaatgttt tttctacatc taccttgaac ctgcatccat
      721 gttctttgta ttctgtttct gtcttgtcct cgcctgcaag taattccaag cggcgtattc
      781 tataatctcc ctctacggga gaggattgat aaaaaactga cttggcagtt tttaccttct
      841 cgaggagtac ttggcctatt agtttttttt tagaaagaag ggaatctgga attcttaaaa
      901 ttattatatt tcctatttga tcgaaagctc cgaatagaac ttcagtctcc tctaatgtga
      961 gtatacttgc cattgcttgt tttagcatct ttgtcaattt ctatagtaaa aatgtccaga
     1021 ctgtttctgt tctctatcta atctactttc ggatttgttt actctgggac gcatactagt
     1081 ctcatctctc ctataggtaa tatccagtga atttaggaat tggttcattc catcagcttt
     1141 tgattttggt gaagtagcat gcccttccct acctggaatt ccatggaaaa taacaagtga
     1201 atctgaaatc aagtccatta gctgtatatc atgatcaatt actattgcag actttccata
     1261 agaacgaacg aatcgttgaa ttaattttgc aatcgctatt ctatcttcaa catctagaaa
     1321 tgcagaaggc tcatcaagtg catacaaatc aactttttgt aataaacaag ctgcaattgc
     1381 caccttttgc aactctccac cggataaatt tttgactgac ttgttgtaaa gtttcattat
     1441 tttcataggg tgaattatga gttcttcctc tgttgttcca tcgattgtac cttcatttgc
     1501 tttctccagt agagaaataa cttcaatgtc ataatcattt gtaagatact gtggtttgta
     1561 tgcaatctta actttggtat cgatacttcc aaaatctggt ttctctactc ctgcaatcat
     1621 cttcatcaag gttgtttttc ctaatgcatt agctccaacc atgccaagta cctcactttt
     1681 tcgaactctt cctgcctcaa ttgagagtga aaagtttgcg aacttttttt ccaaaatggg
     1741 atattctatg atattttcag tggtcacaaa ttcatccgtc gaggtcgacg catcaaattt
     1801 aaacgccgca tctctaaatc gtacattctc agtgggtaaa tatccatcta aaaatacatt
     1861 gatgcccact tttgttgaaa gtacatttgc aactattcca tatgcagctg gctctccata
     1921 tacgacctca ataaaatcac tcaagtaatc caataaggta aggtcgtgtt ctacaaccat
     1981 gacactttta cctaactttg ctaaattctg gataacttta gctaccccca ttctttgaaa
     2041 tacgtcgtta tacgaggaag gttcatcgaa aaaataaaaa tctgcttctc ttgaagctgc
     2101 tactgcaacg gctattcgct gtaactctcc accacttaac tcagaaagtc tgctttcaag
     2161 tgaattttgc agtccgagtt cttgaattaa ttcagaaatt ttatttcgtt catcatattt
     2221 ttcaagtaac tctttggaag tgccatcaaa agccttggca agattataca cctgttgtgg
     2281 ttttatagaa gcttttaatt ccttatttgc aattttttca aaatgagatt ttagttctgt
     2341 acctgaaaaa tgttttaaaa tatcattcca ttctggaggt aaagaataat ttcctagatt
     2401 tggttttaga tttccggaca aaatgtttac cactgtactt tttcctatcc catttcttcc
     2461 taacagcccc attacctgac cttttttcaa ggtaggtatt cggtatagtc taaacgagtt
     2521 taatccatat tgatgaatct tatctgcttt caactcttct gctagattga caatagttat
     2581 tgcatcaaaa ggacaaactt ttacacaaat tccacatcca ttacaaatat tttcatcaat
     2641 ctgcgccttt cctgtttctt catttaggat tatacaatca gaacccatct tatttacggg
     2701 acagtatttg atacattcaa gaccacattt ctttggttga caagcttcct tatcaagaac
     2761 tgccacacgg tgagtcatag ttaaaccacg tctttcttaa tttatatctc tatcaagcaa
     2821 gattaataca gatcataatt tctaaaaata actaagccgg ccatagcgtt ggggtccgac
     2881 ccggtcccat accgaacccg gaagtcaaac ccaatgtcgc tactgtgtta ctaaggtgcg
     2941 agagcccttg ggaagcagta gtgctggcgc ctttctattc taaagcaaca gaatttggtg
     3001 atcctcgcca tactgtttgt gttaaagtat ctctgtcaac acccctcttt ttggcatcat
     3061 caggaaatct atcgatataa tcaaacaaca aattccttat gattttgtca acatctccaa
     3121 gagaatttac atcggtaaac aggtaaggta tttcgctaca tcctatcaca tatccattag
     3181 gattcggtgt tatggtaaaa gtaagtttag gaactctttg attttttacc atgcctattg
     3241 tatatatgac aaagtctaaa aagatcttgt ttaatggcta gttcatgggt aactgctcta
     3301 tttgtggtga aagattcact gatgacatta ggtttctgaa tcatatgatg gaaaaacatg
     3361 gttttaggaa tccaaataat aatgcacctg atagaaatag tcgaggatat tgattttcct
     3421 tatataataa attgaaatta ttttagaatt attctttcac tgttagataa gagggtttta
     3481 attcttgcaa aaaatgcttc aggcgttcta caatcatttc cttctgtcaa tggaaggtct
     3541 tctggtagta atctgacccg ttttccctta aggatgaaaa gcaacagcgg tagaattcca
     3601 gctcttccac cataggctgt tttatcattt atgaaccaaa acattctagt cgcatcatag
     3661 ttttttggga aaatctttga tttaatttct atgccaattt ttgaatactg gcctactatc
     3721 agaatttttt ttcttgccat agttttaatg atattagcaa attttgaaca ataataacaa
     3781 ctatcatcat aaatcataat ggggaagaga tctttatttt ccatatatct tgtaaacctc
     3841 ttcaagatta aaattttgtg aaataacttt ttattgtctc caaatgcgct taaattcatg
     3901 aatttgaaat catgcaatgt taaacttaaa attcaaattt tggaacgggc atgggcctaa
     3961 attattatta tattctcaaa agagtcagac aggcaagaaa acttgtcatc aagggaacta
     4021 ccacagctgg ttctggccat cctggtgggt cgttttcaat ggcagaaatt ctaggctgta
     4081 tttactcaaa atttctaaaa tatgatccaa aaaatccact ttggtctgaa agagatagac
     4141 tggtattatc aaaaggccat gcatcgccag ggcttttttc taatctggca gtagcaggat
     4201 tttttgataa atctgagatt gaaacactta gaaaatttgg tagtaggctt caaggtcatc
     4261 ccgacttcaa atgtcctggt gtagaatttt gtggtggttc tcttggtctg gggctttctt
     4321 tctctattgg tatggctctt gcagcaaggt tagatgaaaa gaatcatcat atttacacta
     4381 taataggaga tggtgaatca gacgagggtc aggtgtggga atctgctatg gcagcatcaa
     4441 aatttaagct agacaatctt actgtattat tggatagaaa tttcattcaa caggatgatt
     4501 atacagaacg tgtaatgcca ctcgatgagg aattggttgg cgatgacatt tcagaaatgt
     4561 ggaaaaatgc atcaaggtgg aaagtaggtg ataaatggag atcatttggc tggaatgttt
     4621 tggaaataga cgggcatgat tttgggcaga ttgaagaggc aattttaaag tcagacaaag
     4681 caaaaggaaa gcccagcgtt ataattgcca aaacaataaa gggcaaagga gtgagct
//
LOCUS       DASPUS010000016         3767 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1789871, whole genome shotgun sequence.
ACCESSION   DASPUS010000016 DASPUS010000000
VERSION     DASPUS010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3767)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3767
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1789871"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1098
                     /locus_tag="VEJ68_00395"
     CDS             <1..1098
                     /locus_tag="VEJ68_00395"
                     /inference="COORDINATES: protein motif:HMM:NF039907.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HXX05260.1"
                     /translation="MFWKSLPYPSTFTKLEKTHDKKLDEITGRQAIELADRMIQAAIK
                     QKITRISGSLNIVSEKFNINNTNGVDCSEKSTYISGVINADSDHGTAPVSGVGAASSR
                     TFAAFSPEDIGNDASEMCINSINPENCEPETYSIIFEPYAFGDMLAFVFSSNFNLKTY
                     SEKRSCFAGKLGQKVAASRFSLIDDPHIPEGIGSKPFDDEGTPTSVRYLIDSGLFANT
                     YSDSFHAFKENQQSTGNASRMGSPMGRDAQPIPIPLPHNLRVKEGDLTMEKMIKETKK
                     GLLVGRLWYTYAVNPERGDFSCTARSGIRIIENGNITKAGKPVRIVHNLLTLLQNISE
                     IGNDSKNVLQWSALPCVTPSIKVDGIRVNPI"
     gene            complement(1095..2102)
                     /locus_tag="VEJ68_00400"
     CDS             complement(1095..2102)
                     /locus_tag="VEJ68_00400"
                     /inference="COORDINATES: protein motif:HMM:NF013832.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:calcium antiporter"
                     /protein_id="HXX05261.1"
                     /translation="MTSSFLYLLGWLAELIFASWLLSEGSEHLSERWGGRFVGRTLLS
                     VATTLPEIAIVVAAAKNGSYNVAIGSALGSNLFMMTLGLAIMIIIATTRLSKAPTNFI
                     NVQEFKMDKVLLAITAVIAAITFVNGYDFIEGILFAGLFAAYLCLAFREMKKEKRPDL
                     LETELHIDQEIKKSKKHFSRAMVLFVAGTVGIFLGAEPFVESLQGYGSDVGISVAILA
                     VIISPIAGEMPEKISMIFLARKGSKGVSIALANVLGSKIVNNTLLLSVAIFAVMAYKG
                     FFAKIPGTPLLVDQMMLVTVITLVALVPMFRNKLDLRSGVLLLSLYAIGIGIQFVLPH
                     S"
     gene            complement(2215..2451)
                     /locus_tag="VEJ68_00405"
     CDS             complement(2215..2451)
                     /locus_tag="VEJ68_00405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HXX05262.1"
                     /translation="MHSAFVLMNAELGKETHIVNELEKIPNVKEVYPVYGVYDVMMVI
                     ESDSMETLRETITSKVRKLDGIKSTLTMIIVKEQ"
     gene            2600..2947
                     /locus_tag="VEJ68_00410"
     CDS             2600..2947
                     /locus_tag="VEJ68_00410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05263.1"
                     /translation="MMKTRMTYIPVEVADHFSDFIIKKDEQILDAVKARTRDFSTISI
                     LKLLYQLRCGPITFSDLYIKSNIRMKRSFLNYLHLCMEYNFIRKEPVGSNMIYFITDK
                     GRTMLDLFMHKNN"
     gene            3022..>3767
                     /gene="purM"
                     /locus_tag="VEJ68_00415"
     CDS             3022..>3767
                     /gene="purM"
                     /locus_tag="VEJ68_00415"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010194449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HXX05264.1"
                     /translation="MGVTYRDAGIDIKKIKQSQATIGRLISSTHKLQKGIKIMSGFGH
                     YAGLVEIPDGKILATHTDGVGTKVIIAQMMKKYDTVGIDCVAMNVNDIICTGAVPLSF
                     VDYIAANRNDQEIFKQIVRGLVKGAKKAMVPIVGGETAILPDLIAGKNFSFDLAGMVV
                     GLLKKQNIILGDMISPGDIIIGVKSSGLHSNGYSLARKVLLSKYSLRDKIKGIGTLGD
                     ILLEPTEIYVQPVLQAIRECDIHGLAHITGG"
BASE COUNT         1283 a          710 c          693 g         1081 t
ORIGIN      
        1 atgttttgga agtcattacc atatccatca acatttacaa aattagaaaa aactcatgat
       61 aaaaaactag atgaaataac aggcaggcaa gcaattgaat tggcagatag aatgatacaa
      121 gctgcaataa aacaaaaaat aactaggatt tcaggatcat taaatattgt atcagagaaa
      181 tttaatatta ataatacaaa tggcgtagat tgttctgaaa aatcgactta catatctggt
      241 gtaattaatg cggattcaga tcatggaacc gcgccagtaa gcggtgttgg agcagcatct
      301 tcacgtacat ttgcagcatt ttctccagag gatattggca atgacgcctc agagatgtgt
      361 ataaattcaa tcaacccaga aaactgcgaa ccagaaacat atagcataat ctttgaaccc
      421 tatgcttttg gcgatatgct tgcttttgtg ttttcatcca actttaacct aaaaacatat
      481 tctgaaaaac gaagttgttt tgcaggaaag cttggacaaa aagttgcagc ttcgagattt
      541 agtttaatcg atgatcctca cattcccgaa ggcattggaa gcaaaccatt tgatgatgag
      601 ggaacaccga catcagtaag atatttgatt gattccggat tgtttgcaaa tacatattct
      661 gattcattcc atgctttcaa agaaaatcag caatccacgg gaaatgcaag caggatgggc
      721 tcaccaatgg gtagagatgc acaaccaatc ccaattccat taccacataa tttgcgggta
      781 aaagaaggtg atttgaccat ggaaaaaatg ataaaagaaa cgaaaaaagg attgcttgtt
      841 ggaagacttt ggtatactta tgcggtaaat ccggaacgtg gcgacttttc ttgtacggca
      901 agaagtggca tcagaatcat agaaaacggc aacattacca aggctggaaa acccgtcagg
      961 atagtgcata atcttcttac attgcttcag aacatatcag agataggcaa tgattcaaaa
     1021 aatgtactgc aatggagtgc acttccatgc gttacacctt ccatcaaggt agatggaatc
     1081 agagttaacc cgatttaaga atgtggaagt acaaactgta ttcctattcc tattgcatag
     1141 agcgacaata acaatactcc agaccttaga tccaatttgt ttcgaaacat aggtaccaat
     1201 gcaacaagtg tgataacagt aacaagcatc atttgatcta ctaaaagtgg ggttccaggg
     1261 atttttgcaa aaaatccttt gtacgccatt actgcaaaaa tcgccacaga tagcaacaaa
     1321 gtgttgttga ctatcttcga ccccaataca tttgcaagag caattgaaac ccctttgcta
     1381 ccttttcttg ccaaaaatat catagaaatt ttttcgggca tttcaccagc aattgggctg
     1441 attattacag caagtatagc tacagatatt cccacatcgg aaccgtaacc ttggagtgat
     1501 tcgacgaatg gctctgcccc tagaaaaatc ccaacagtac cagctacaaa aagcaccatt
     1561 gctcgactga agtgtttttt tgatttcttt atctcttgat caatatgaag ttcagtttca
     1621 agcaaatctg gtctcttctc ttttttcatc tctctaaatg caagacaaag ataagcagca
     1681 aacaaaccag caaacagaat tccctctatg aaatcatatc cgttaacaaa tgttattgcc
     1741 gctatcactg cagtaattgc aagaagaact ttgtccatct taaattcttg aacatttatg
     1801 aaatttgtcg gggcctttga taaacgagta gttgcaatga taatcattat cgcaagaccc
     1861 aatgtcatca tgaataaatt actgcctaaa gctgagccaa ttgcgacgtt ataggaaccg
     1921 ttttttgctg cggccacaac tattgcaatc tccggaagag tagtagcaac actaagaaga
     1981 gttcttccaa caaatcttcc accccatctc tctgagagat gctctgatcc ttcagagagg
     2041 agccagcttg caaaaataag ctcagccagc catcctaata agtaaagaaa actgctagtc
     2101 aatccatatt ctacatattg acttttaata attcgtacgg tagatagaaa agaagcccgt
     2161 tttgtattat gaccaaatat accttcaatt cacgtcaagt ttaaccgaaa ttagttattg
     2221 ttcttttaca attatcattg taagtgttga ttttattcca tctaattttc taactttgga
     2281 ggttattgtc tctcttagtg tttccattga atctgactcg atgaccatca taacatcata
     2341 aacaccataa actggataaa cctcttttac atttggaatt ttttctagtt catttacaat
     2401 gtgtgtctct ttgccaagtt ctgcattcat aagaacaaac gcactatgca cggtgttgtt
     2461 tcttaggccc aacataaaaa caaattgtga tgtaataaac taacagtagt ttgtccgttt
     2521 tatgttcaaa aaagctagcg accagctcaa aaaaatcact cagttagaat taataaggta
     2581 tattacggta ccatacggta tcatgaaaac aagaatgacc tacattcctg tcgaagtggc
     2641 agatcatttc tcggatttta tcataaaaaa ggatgagcag atattagatg ccgtgaaagc
     2701 aaggactcgt gattttagta cgatatccat tctcaagctg ctttatcaat tgagatgcgg
     2761 gccaataaca ttttcagatc tttatatcaa gtccaacatt cgcatgaaaa gatcatttct
     2821 aaactacctt catctttgta tggaatacaa ctttattcga aaagaacccg taggatcaaa
     2881 tatgatttat ttcataacgg acaaaggaag aaccatgtta gatctgttca tgcataaaaa
     2941 taactagcac tggcatatag agaaaaaatc actttaaaca gcatcaaaat tcttttatcc
     3001 cgatcaaatg gagcaaatct attgggagtc acatatagag acgcaggaat tgatataaaa
     3061 aaaatcaaac agagtcaggc tacaattgga agattaattt catctactca taaattacaa
     3121 aaaggaatca agataatgtc aggttttggg cattatgctg gcctagtgga gattcccgat
     3181 ggaaagatac tagcaacaca tactgacggg gtcgggacta aagtgataat tgcgcaaatg
     3241 atgaaaaaat atgatacagt aggtattgat tgcgtggcta tgaatgtaaa cgacataata
     3301 tgtactggtg cggttcccct ctcatttgtt gattacatag cagcaaatag aaatgatcaa
     3361 gaaattttca agcaaattgt ccgtggattg gtaaaaggcg ccaaaaaagc tatggtgccc
     3421 atagtcggag gcgaaactgc catccttccc gatttaatag cgggaaaaaa tttctctttt
     3481 gatttggctg gcatggtagt aggattacta aaaaaacaaa acattattct tggcgatatg
     3541 atttctcctg gtgacataat cattggagtg aaaagcagtg ggttacattc taatggttac
     3601 tcgcttgcta gaaaagttct actttcgaaa tattcgttgc gcgataaaat aaaaggcatt
     3661 ggcacattag gagacatact tctggagcca actgagattt atgtacaacc tgttcttcag
     3721 gcaataagag agtgcgacat acatggtctt gcccacatta ccggtgg
//
LOCUS       DASPUS010000017         2191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1927780, whole genome shotgun sequence.
ACCESSION   DASPUS010000017 DASPUS010000000
VERSION     DASPUS010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2191)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2191
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1927780"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..825)
                     /gene="hemC"
                     /locus_tag="VEJ68_00420"
     CDS             complement(<1..825)
                     /gene="hemC"
                     /locus_tag="VEJ68_00420"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HXX05265.1"
                     /translation="MRYLVGTRGSQLSLAQTNWVISELEKKSTQTEFELVPIKTKGDT
                     DARPLFTINQKGIFEKEIDRAVAERKVDFAVHSLKDVPADLPEELVLACIPKREATND
                     VFISKNGQTLNSIKKGAIIGTSSLRRAVQITRIRPDVIVKPIRGNIETRIKKVSDGIF
                     DAIVLAEAGIGRLGLAVKFEKLSTDNFSPSPGQGALAIVARRDNSELIDLLKKIEDPT
                     SRNVVEAERSLSLFVDSGCRFPVGALAEQKENRLTLTVTVYSVDGTKSIMVKKESEA"
     gene            complement(822..2099)
                     /gene="hemL"
                     /locus_tag="VEJ68_00425"
     CDS             complement(822..2099)
                     /gene="hemL"
                     /locus_tag="VEJ68_00425"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HXX05266.1"
                     /translation="MSNSEKLFLRAKKVIPSGINSPVRYYDPYPFFVKKAEGSSIWDV
                     DGNRYLDFCNAYGALLLGHQRNEILSSVKSQLRRGTLYCAPTELEVELAELISKNFPS
                     MQKVRLVNTGSEATMTAIRLARGFTKKKKIIKFEGCYHGSHDYVLVKAGSGAAHMGIS
                     LSEGSLDEISKNTLVVQYNNSQELASVLESEQDVAAVIIEPVLANMGLVLPEKNFLNE
                     VRKITSDHDTLLIFDEVITGFRMSTGGAQKYYSIKPDITTLGKALGNGFVIAAVGGRN
                     DIMNMLSPEGKVYQASTYAGNPISVSAAIASVKTMNKNKTKLYPRLEKSCKKLASVIG
                     DLASDMKIPHQINSISSMFQIFFTDVPVRDYLSAKAADSTKFKKLFQDLLKNGVFVAP
                     SQYETVFLSDAHTKKDIRKTIVAYEKALKMVKK"
BASE COUNT          616 a          459 c          358 g          758 t
ORIGIN      
        1 tgcctcagat tctttcttaa ccattatgga ttttgttcca tctacagaat aaacagtaac
       61 cgtaagagtc agacggtttt ctttttgttc agcaagcgca cccactggga atctacaacc
      121 cgaatccaca aataatgaca gcgatctctc tgcttcgaca acatttcttg aggtcggatc
      181 ttcgatcttt ttcaagagat ctattagttc actattatcc cttcttgcga ctatagcaag
      241 agcaccttga ccaggagagg gagaaaaatt atctgtagat aatttttcaa attttacagc
      301 cagcccaagt cttccaattc ctgcctccgc aagaactatt gcatcaaaaa ttccatcact
      361 aacctttttg attcttgttt ctatatttcc tcgaattggt ttgactataa catctggtct
      421 tattcttgtt atttggactg cccttcttaa gctactagta cctatgattg ctcccttttt
      481 tattgaattc agtgtttgcc cattctttga tatgaaaaca tcgtttgtgg cttcacgttt
      541 tggaatacat gccagaacaa gttcctctgg aagatccgcg ggaacgtcct ttaggctatg
      601 tactgcaaaa tctacctttc tctcagctac tgccctatca atttcttttt cgaatattcc
      661 tttttgattt atggtaaaaa gaggtcttgc gtcggtatct cctttagtct ttattggaac
      721 taattcaaat tcagtttggg tagacttttt ttctaactct gaaatcaccc agttagtctg
      781 cgcaagcgag agctggctcc ctctagtccc aactaggtac ctcacttttt caccatcttc
      841 agtgcctttt catatgcaac aatagtcttt cgaatgtctt tcttggtatg cgcatcagaa
      901 agaaatacag tttcatactg agaaggagca acaaagactc catttttgag taagtcttgg
      961 aataattttt tgaattttgt cgagtctgct gcttttgctg ataaataatc ccgtacaggt
     1021 acgtccgtga aaaagatctg aaacattgaa cttattgaat ttatctgatg tggtattttc
     1081 atatcggaag caagatcccc tatgactgat gctagttttt tacatgattt ttcaagcctt
     1141 ggatagagtt tggttttatt cttattcatt gttttaacag acgcaatagc agcagatacc
     1201 gaaattgggt tacctgcata ggtactagcc tggtaaacct ttccttctgg tgacaacata
     1261 ttcatgatgt catttcttcc acctactgct gcaatcacaa atccatttcc caatgccttt
     1321 ccaagcgttg taatgtcagg ttttatagaa taatattttt gcgcacctcc agttgacatt
     1381 ctgaaaccag taatcacttc atcaaatatt aaaagagtgt cgtgatcaga agtgatcttt
     1441 ctaacctcat ttagaaaatt cttttctggc agaacaagtc ccatatttgc aagaactggt
     1501 tctatgatta ctgcagcaac atcttgttca gattctaaaa cagaagcaag ttcctgagaa
     1561 ttattgtatt gtacaacaag agtattttta gaaatttcgt caagacttcc ttcggaaaga
     1621 gatattccca tgtgtgctgc tcccgatccc gctttcacca agacatagtc atgagatcca
     1681 tgataacatc cctcaaattt gattattttt ttcttttttg taaaacctct tgccaatctt
     1741 atggcagtca tagtagcttc actacctgta tttaccaatc gtactttttg cattgacgga
     1801 aagttctttg aaattaactc ggctaattct acctcaagct cggttggagc acaataaagg
     1861 gttcctctcc tgagctgaga ttttacactt gaaagaattt catttctctg atgtcctaaa
     1921 agtaaggctc cataagcatt acaaaagtca agataacgat ttccatcaac atcccagata
     1981 gagcttccct ctgctttttt aacaaagaat ggatatggat cataatatcg aacaggacta
     2041 ttaattccag aaggaattac ttttttcgcc ctcaaaaata gtttttctga gtttgacatt
     2101 catcttcaaa gagttggatt gtcattataa tctatatgaa aagatcattt atgcaaataa
     2161 attttaacgc ttctgagcct gacaattaac t
//
LOCUS       DASPUS010000018         2364 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1516864, whole genome shotgun sequence.
ACCESSION   DASPUS010000018 DASPUS010000000
VERSION     DASPUS010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2364)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2364
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1516864"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..897)
                     /locus_tag="VEJ68_00430"
     CDS             complement(<1..897)
                     /locus_tag="VEJ68_00430"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HXX05267.1"
                     /translation="MQIEKITQVLSIPYSVFISVILGIMILAFPIGAYVVFNSNIGSE
                     INFQYPLDGFNFFIAGMSYKLPVSFEIGDCFIILWSIYLILFSVSLMGPQSNFMKTLG
                     HIMPEGWKNIRENGLINAITWFSILILVSIIIDFIQSFAGVKIESPISQNNLINFFQL
                     SLSPLTEELGFRVMLIGIPLFLLFSHNSTWKEFFKSLWKPSAYLHLTNNRKVLALIIT
                     IGLFFGAAHIISGNPWSTGKFTQATIAGIIIGWVYVRYGLAPAIIIHWATNFFIFSYS
                     YFMSDINQIPTSDFSSPFSNMLE"
     gene            complement(908..1216)
                     /gene="yciH"
                     /locus_tag="VEJ68_00435"
     CDS             complement(908..1216)
                     /gene="yciH"
                     /locus_tag="VEJ68_00435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response translation initiation inhibitor
                     YciH"
                     /protein_id="HXX05268.1"
                     /translation="MAVICNTCGLPNDLCACGELEKDQTQIVVRLEERRFKKKGTMIE
                     GINPKMNDLGKVVRELKARYACGGTVKEGYIFLQGDHRDSIKGTLVKLGFPESSIEVH
                     "
     gene            1296..1628
                     /locus_tag="VEJ68_00440"
     CDS             1296..1628
                     /locus_tag="VEJ68_00440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008299020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sjogren's syndrome/scleroderma autoantigen 1
                     family protein"
                     /protein_id="HXX05269.1"
                     /translation="MSKELTKKAVEMLLSGATMVSAPCPYCKGVRIIKDGNAFCVNCG
                     KEGKNEKISEETPNEEKSTTLPIDRLDIKLKELANELEHENDYGKQQQIIRSINEIIS
                     IKEKLKKL"
     gene            1671..1835
                     /locus_tag="VEJ68_00445"
     CDS             1671..1835
                     /locus_tag="VEJ68_00445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016939666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit Sec61beta"
                     /protein_id="HXX05270.1"
                     /translation="MSSKKSAPLPASSAGLLRFFEDETKGYKIRPEIVIAIPSSLIAI
                     SWILKIFFSP"
     gene            1832..>2364
                     /locus_tag="VEJ68_00450"
     CDS             1832..>2364
                     /locus_tag="VEJ68_00450"
                     /inference="COORDINATES: protein motif:HMM:NF021370.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2070 family protein"
                     /protein_id="HXX05271.1"
                     /translation="MTASSDNVSRIHKRYTLTTFTPTSPYVSIIASTSIVCAIVSISL
                     ICYFKTTDLLFVSIPLAVGTLIVTQFIDWKLLKTDYSKSLHMSAFGNLLWLVTILGGM
                     LSVYIFSKPHQFPIYITEGMILFASFRIGIFTSVIGAKVKKAWAICLIQPLAIFLAFV
                     PPSDWFQMLSDPRAIIYG"
BASE COUNT          795 a          411 c          387 g          771 t
ORIGIN      
        1 ttctaacatg ttagaaaatg gacttgaaaa atcactagtt ggaatttgat tgatgtctga
       61 cataaaatat gaatatgaaa aaatgaaaaa gttagttgcc caatgaataa taattgctgg
      121 tgcaagtccg tatcttacat aaacccatcc tatgattatg cctgcaattg tagcttgtgt
      181 aaattttcca gtactccatg gatttccaga aattatgtgt gctgcaccaa aaaataatcc
      241 tatggtgata attagagcta aaacttttct attatttgtt aaatgcaaat atgctgaagg
      301 cttccataaa gatttgaaaa attctttcca tgtagaatta tgtgaaaaga gtaaaaagag
      361 cggtatgcct attagcatca ctctgaatcc taattcttcg gttagtggag aaaggctaag
      421 ttgaaaaaaa ttaattagat tattctgtga tataggcgat tcaattttaa caccggcaaa
      481 actctgaata aaatcaatta ttatggaaac taggattaaa attgaaaacc atgttattgc
      541 attaataagt ccattttctc taatattttt ccaaccttca ggcatgatat gacctaatgt
      601 cttcatgaaa ttactttgtg gacccatcag tgatactgag aataaaatca agtaaattga
      661 ccaaagtatg ataaaacaat ctccaatttc aaatgaaact ggtaacttgt aactcattcc
      721 agcaataaag aaattaaaac catccagtgg atattgaaaa tttatttcgc tacctatgtt
      781 ggaattaaaa acaacatatg ctccaatggg aaatgcgaga atcatgatgc caagaataac
      841 cgatatgaaa acagaatacg ggatagagag gacctgtgtt attttttcga tttgcaacaa
      901 ggtaatttca atgaacttct atgcttgatt ctggaaatcc tagttttact aacgttcctt
      961 ttatgctgtc tctgtggtct ccttgtagaa agatgtatcc ttcttttact gttccaccac
     1021 atgcatatcg cgcttttaac tctctaacaa cttttcctaa atcattcatt tttggattaa
     1081 ttccttcaat cattgtgccc ttctttttaa aacgtctttc ctcaagtcta accacaattt
     1141 gtgtttgatc tttctcaagt tcaccgcatg cacataagtc atttggaagt ccgcaagtat
     1201 tgcagattac cgccattcaa attaaaaacc tgatttccca ctattaagcc ttgttcatct
     1261 gtatcttttt tactttgatt taatacataa aattcatgtc caaagaacta acaaaaaaag
     1321 ctgtagagat gctacttagt ggtgctacaa tggtgagtgc tccttgtcca tattgtaaag
     1381 gtgttagaat aataaaagat ggaaatgcat tttgcgtaaa ttgtgggaaa gaaggaaaga
     1441 acgaaaaaat ttctgaagag acaccaaatg aggaaaaaag tactaccttg ccaattgatc
     1501 gactggatat aaaattgaaa gaattagcca atgaattgga acatgaaaat gactatggaa
     1561 aacagcaaca aatcatccga tcaattaatg agataatctc tattaaggaa aaactcaaga
     1621 aactctaatc acaaaagtat ttatttaaaa tgacctttta tcagcttgat atgagtagta
     1681 aaaagtctgc accgcttcca gcatcaagtg caggtctttt gagattcttt gaagatgaga
     1741 ccaagggata taagattagg cctgaaatag taattgctat tccaagttcc ttgattgcaa
     1801 tctcgtggat tttaaaaata ttcttctcac catgacagca agctcggaca atgtatctcg
     1861 tatacataag agatatactc ttacaacatt tactcccact tctccctacg tctcgataat
     1921 cgcatctact tctattgtgt gtgcaatagt ttcgatatca ttgatatgtt actttaagac
     1981 aactgatctg ctttttgtca gcattccttt agctgtggga actctgattg taacacaatt
     2041 tatagattgg aaattattga agactgatta ctccaaatct ctacacatgt ctgcatttgg
     2101 aaaccttcta tggcttgtaa ccattctagg cgggatgtta tcagtataca ttttttccaa
     2161 accgcaccaa tttccaattt acataacaga agggatgatt ctgtttgcaa gttttcgtat
     2221 aggtatattc acatctgtta taggtgctaa agtaaaaaag gcttgggcga tatgtttgat
     2281 acaacctctt gcaatattct tagcatttgt accaccatct gattggttcc aaatgctatc
     2341 tgatccaaga gctattatct atgg
//
LOCUS       DASPUS010000019         2195 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_9958, whole genome shotgun sequence.
ACCESSION   DASPUS010000019 DASPUS010000000
VERSION     DASPUS010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2195)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2195)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9958"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..266
                     /locus_tag="VEJ68_00455"
     CDS             <1..266
                     /locus_tag="VEJ68_00455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05272.1"
                     /translation="LREFGELNQTNLLSYCGLNLGKHRDILDSLEENGLIKKTRIQWK
                     SKITVKYSITNKGRRFCKIILEPYENMFPRDKKYANSMSEYVI"
     gene            401..1132
                     /locus_tag="VEJ68_00460"
     CDS             401..1132
                     /locus_tag="VEJ68_00460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HXX05273.1"
                     /translation="MASFSSARQVEGGIFISLPYSVLKNAPTRVEVVRFEIKPLINHV
                     NELRSLTRFRNFLYSHSHKHDRMNTKILTGNRKMLAMILSVAVIATIGGSLAFAQTAG
                     STGQSSTTTTPPKIQGSVNLQQLLLSNVQTKFTDAANTAAGAVTNGQVIAGSLAVIQG
                     SVVYNFKVIDGTNIYSVIVDAGNGKVLYTSTGHAIQLGGLLGMGGGGMGHYGMMGKHH
                     MGMGGGAWKSQQPSSTPSPAPTATQ"
     gene            complement(1256..1651)
                     /locus_tag="VEJ68_00465"
     CDS             complement(1256..1651)
                     /locus_tag="VEJ68_00465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05274.1"
                     /translation="MKKYFIAAMIGLIMLGTAFGTSNAQATSVGVTLGKVAPKTIISS
                     GFPCNMIDQNGAFFQTTSSTATPFKLVCTANLDYWTKDTSITWNAGNTGVSCSNVNGA
                     VTNNWSETIYPQGFARLVCYFSGQTAPSN"
BASE COUNT          713 a          373 c          442 g          667 t
ORIGIN      
        1 aattaaggga atttggcgaa ttaaatcaaa ctaaccttct aagttactgc gggcttaacc
       61 ttggtaagca cagagatatt cttgatagtc ttgaggaaaa tggcttgata aaaaagacta
      121 gaatacaatg gaagagcaag attacagtaa aatattcaat aactaacaag ggcaggagat
      181 tttgtaaaat aattctagag ccctatgaga acatgtttcc aagagataaa aaatatgcta
      241 atagcatgtc agaatatgtt atatgaataa tcagagcatg tctagatccc caactgtcta
      301 gaaaaatttg caaatcatac gatttgaata gttttaatcg tcattggtac agaaatgaaa
      361 ttctcatatc tagcagaaaa taagctgtgt gggagatgtc atggcaagtt tttcatcagc
      421 aagacaggta gaggggggga tattcatttc tctgccttat tcagttttga aaaacgctcc
      481 cacacgtgtt gaggttgtta ggtttgagat aaaaccattg attaaccatg tcaatgaact
      541 ccgttcactt acaaggtttc gcaatttttt atattcgcat agtcataaac atgatagaat
      601 gaatacaaaa attctgactg gcaatcgtaa gatgcttgcg atgattctaa gtgtagcagt
      661 aattgctaca attggaggat cactggcatt tgcacagact gctggttcta cgggacagag
      721 ttccacgaca actacaccac caaagataca aggctctgtc aacctgcaac agctgctatt
      781 gtctaatgtt cagacaaagt ttaccgatgc agcaaatact gcagcaggag ctgtaaccaa
      841 cggacaggtt attgccggaa gcttggctgt aatccaagga tctgtcgtct ataactttaa
      901 ggtaatagat ggcacgaaca tttattccgt aattgtagat gctggcaatg gcaaagtgct
      961 atacacttca acaggccatg caatacaact aggcggatta cttggaatgg gtggaggtgg
     1021 aatgggccac tatggaatga tgggcaaaca ccacatggga atgggcggag gtgcgtggaa
     1081 gtcacagcag ccatcatcta ctccgagtcc agcaccaact gcaactcagt aggaccaaaa
     1141 tcctttcctt tttttatttt ttaataaaat gataatgcta gactttggta gatctgaact
     1201 taaaagtaaa aactatgtta tgatttgtta aaaaaaagaa agtatgtggg tactcttaat
     1261 ttgatggtgc tgtttggcca ctaaagtagc agaccaatct tgcaaatcct tgtggataga
     1321 tggtctcaga ccagttgttt gttactgcac catttacgtt tgaacaagat actcctgtgt
     1381 ttccagcatt ccaagtaatt gatgtgtcct tggtccagta gtcaaggttt gcagtacaca
     1441 ccagtttgaa tggtgtcgct gtagatgatg ttgtctggaa gaaggctcca ttttggtcta
     1501 tcatgttaca tggaaaacca ctggagatga ttgtctttgg agcaaccttg cccaatgtta
     1561 caccaactga tgtagcttgt gcattggatg ttccaaatgc cgtacccaac atgatcaatc
     1621 cgatcattgc ggctatgaag tatttcttca tcgatatttt gtgtatctca ttctataaaa
     1681 gtatgatctc aggacttttg gaagccatgt aaaattttat aatttttttt cagagcatgt
     1741 aacatatatg aatcaaattg atttatttgt aaattcttaa cgtcattttg tgatattcct
     1801 ttcagtgtag atcagtgtga ctaggtgtaa ctcggtgttg caacttaatg aaaaaaatca
     1861 atatgtcaaa atccacagac tcgttacctg caaatttaat tttaaatggc tttgccatgc
     1921 cctgagtacg ctctaaaaat ctgcttaact ttaggtatga gtattggaaa atcttatgaa
     1981 ttgcattaga tcgcataaaa aataaatgaa gttatcgaca aataaatgcc aacgcaattt
     2041 atcagaccct aaggaatatt aagcctaaca aattctatca aattaatcgt agcagaacga
     2101 gggttgggtt ttataataat ataattctcg aggttttaat tgttaaattt attttcaatt
     2161 aaaactggta ggtagaagaa tctttgctaa aaaaa
//
LOCUS       DASPUS010000020         2505 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_833327, whole genome shotgun sequence.
ACCESSION   DASPUS010000020 DASPUS010000000
VERSION     DASPUS010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_833327"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..765
                     /locus_tag="VEJ68_00470"
     CDS             <1..765
                     /locus_tag="VEJ68_00470"
                     /inference="COORDINATES: protein motif:HMM:NF013317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 3'-terminal phosphate cyclase"
                     /protein_id="HXX05275.1"
                     /translation="DVGTAGSIPLILQVLIPAVSLLRKKLRISITGGTDVPWSPTSNY
                     TKFVLGEAYSRIGIGFSLNVKRRGYYPKGRGLIEVEVTPAKNLIPISLTERTTRSANF
                     LCSYSKLSQDQIHSEIDEVRMILEKDGFQCNFSVTEDDAIDKGCSFLVFSHDDRSIVG
                     TDAIYEKSLNGIGKFVANKFIETNHGVDLFLSDMLVVPLSLIKDTSVFRVKQITKHLE
                     TNLFVAAKMTGCRYGIGKVDDGFEVRISGISDSRMQ"
     gene            complement(745..1239)
                     /locus_tag="VEJ68_00475"
     CDS             complement(745..1239)
                     /locus_tag="VEJ68_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008298658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HXX05276.1"
                     /translation="MSISDALIMWAHLVAASIWVGGSIFIGIVLAPLLKTISDSIEGR
                     LSIMIRVGRKFNKIAVPSLIILIVTGLYNSSGYLTKPSLFLSTNYGLVLVVKIILVII
                     LIITFIIHVRLIRSKVEKQIESKTLSSIEIQRFRSKIIALGRITVIVSVAILLMAALL
                     HSGI"
     gene            1323..1820
                     /locus_tag="VEJ68_00480"
     CDS             1323..1820
                     /locus_tag="VEJ68_00480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05277.1"
                     /translation="MVSKGRVVIMAAFVGLGLLMLFFYLYADTFQPTLQEVNINLQTV
                     KILNIDKINNRANLEVDYFLSNPTTVTSTISTIDYELYANGKDIGEGHYSVEDIPMAG
                     RPALFSGGNTTVTDTFQLVKSSNIADVYDSIVKGEPVKYEAKGQVTIESTLTLITKDF
                     DLFLG"
     gene            complement(1817..2215)
                     /locus_tag="VEJ68_00485"
     CDS             complement(1817..2215)
                     /locus_tag="VEJ68_00485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HXX05278.1"
                     /translation="MVKFTPKEIKFLKFNEGCRVATSANDIPHIAPVTYYFEDGYLYF
                     ATDYDTKKYSNLKKNNKIAISVDIYSPGKHKGVVIQGTSIFIERGKEFKRLYDIFYKN
                     FAWVRAMPWKEDEAPFVKITPKKKVSWGIG"
     gene            complement(2229..>2505)
                     /locus_tag="VEJ68_00490"
     CDS             complement(2229..>2505)
                     /locus_tag="VEJ68_00490"
                     /inference="COORDINATES: protein motif:HMM:NF017771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF899 family protein"
                     /protein_id="HXX05279.1"
                     /translation="PDDSTTQKKFAKSRGWKFQMISTRGTSFAKDMGFEQDGMPKPGV
                     SVFYKNDGKIIRVGRDDFGPGDNYCPTFPLFDLLKDGTSNWQAKFTY"
BASE COUNT          798 a          441 c          452 g          814 t
ORIGIN      
        1 gatgttggta cagcaggaag cataccactt attttgcaag ttctaattcc agcagtttca
       61 cttttgagaa aaaaacttag aatttctatc acaggtggaa cagatgtccc gtggagtcct
      121 acttcaaatt atacaaaatt cgtgttaggt gaagcatact caagaattgg gattggtttc
      181 tcacttaatg ttaaacgacg tggttattat ccaaagggaa gaggcctgat agaggtagaa
      241 gtaactcctg ccaaaaacct gattccgata tcacttactg aaagaactac aaggtcagca
      301 aatttccttt gttcttattc aaaactatcc caagaccaaa ttcatagtga gatcgatgaa
      361 gtccgaatga ttctagagaa agatggattt caatgtaatt tttcagtcac agaagatgat
      421 gccatagaca aaggatgttc tttcctagtc ttttctcatg atgatagatc tatagttgga
      481 acagatgcaa tttatgaaaa atccctaaat gggataggaa agtttgttgc aaataaattc
      541 atagaaacaa accatggagt ggatttgttt ctctctgaca tgctagttgt acctctttct
      601 ttgataaaag atacgtcagt ctttagggta aaacaaataa caaaacattt ggaaacaaat
      661 ctgtttgtag cagcaaaaat gactggctgt agatatggaa taggaaaagt tgatgatggt
      721 tttgaagtac gaataagtgg tatatcagat tccagaatgc aataatgcag ccataagtaa
      781 tattgcaaca gagactatga cagtaattct tccaagagca attatttttg agcgaaatct
      841 ttggatctca attgaagaaa gtgtctttga ttcaatctgt ttttctactt tacttctgat
      901 caatcttacg tgtattatga aggtgataat tagaattata acgagaataa tttttactac
      961 taaaactagg ccataatttg ttgaaagaaa caatgatggt tttgttagat aaccacttga
     1021 gttgtacaaa ccagttacaa tgagtattat cagcgatggt actgcaatct tgttgaattt
     1081 tcgtcccaca cggatcatta ttgatagcct gccttcaata gaatctgaaa ttgtcttaag
     1141 aagtggagct agaactattc ctatgaatat agatccccca acccatatag aagctgcaac
     1201 tagatgcgcc cacattatga gagcatcaga gattgacatg tctctatacc atttgctgac
     1261 aaataatatc tattctcctc tgagaaggtt ttttaattca atatagccgg tagcttttag
     1321 atttggtcag taagggtcgt gtagtgataa tggcagcttt tgttggtttg ggattactca
     1381 tgctcttctt ttatctttac gcagatacat ttcagcccac gttacaggaa gtaaacatca
     1441 atctccaaac tgttaaaatt ctcaatattg ataaaataaa caatcgagct aatcttgaag
     1501 tagactattt tctttctaat ccaacaacag tgacatctac catatcaaca attgattatg
     1561 agttatatgc caatggtaag gatattggcg aaggacatta cagtgttgag gatattccaa
     1621 tggcaggaag acctgcttta ttttccggcg gtaatactac tgttacagat acattccagc
     1681 tcgtaaagag cagtaacatt gctgatgtgt atgattcaat tgttaaagga gaaccagtca
     1741 agtacgaggc aaagggtcag gtcacaattg aatcaacctt aacgctaatc acaaaagact
     1801 ttgatctatt tcttggctag ccaatacccc agctaacttt cttttttgga gttatcttta
     1861 caaagggagc ttcgtcttct ttccaaggca ttgctcttac ccaggcaaaa ttcttgtaaa
     1921 aaatgtcata gagtcgtttg aattctttgc ctctctcaat aaaaatcgaa gttccctgta
     1981 tcaccactcc cttgtgtttt cctggagaat agatatcaac agatattgct attttgttat
     2041 tctttttcag attagagtat ttttttgtgt cataatcagt tgcaaaataa aggtagccgt
     2101 cttcaaaata ataagtcaca ggagcaatgt gtggtatatc gtttgcactt gttgccactc
     2161 gacatccttc gttgaatttc aaaaatttta tttcttttgg ggtaaatttg accatgattt
     2221 taaaataatt aataagtaaa tttagcttgc cagttgcttg ttccgtcttt tagcaagtca
     2281 aacaaaggaa aagtggggca atagttatca cccggaccaa aatcatcacg tccaacacga
     2341 attattttac catcattttt gtaaaataca gacacacctg gttttggcat tccatcttgt
     2401 tcaaacccca tgtcttttgc aaaactagtt cctctagttg aaatcatctg aaatttccat
     2461 cccctggact ttgcaaattt cttttgtgta gtagaatcat caggt
//
LOCUS       DASPUS010000021         2024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_11277, whole genome shotgun sequence.
ACCESSION   DASPUS010000021 DASPUS010000000
VERSION     DASPUS010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2024)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2024
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11277"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1231
                     /locus_tag="VEJ68_00495"
     CDS             <1..1231
                     /locus_tag="VEJ68_00495"
                     /inference="COORDINATES: protein motif:HMM:NF014342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alanine--tRNA ligase-related protein"
                     /protein_id="HXX05280.1"
                     /translation="GIPETDLLYYKEDPHEFEAKVLKIINGKFVVLDKTSFYARGGGQ
                     EPDHGTISNYEVIDVNKHGNVVVHEVKGGVPHEGETVRCKIDTMRRYGITRHHSSTHV
                     LNASSRNVLGSWIWQHSAFKDKDYARLDITHHSNLTEEEITKIEDLANLTIRKNIPIL
                     INEFERGDAEQKYGFRIYQGGVVPVKLVRIVNVEGFDIEACGGTHVKKTGELGLIKIT
                     KAERIQDGVVRLEFVAGEAALKYTQSQDKKISQIVKSLGSSKEKLVESFDHVVKDSDD
                     AKKKLKQLIKRTAESAAKNAISQAKTIGKIKLYCIVDEELDEEYHIAVGEQAIALDKS
                     FIYCSLIIKNGSIRIVSFCGPDASKIKKAGDLVRDMSKVLGGSGGGRDNFGQGGGKDL
                     LKIRDAIVVAEQSILGK"
     gene            1236..>2024
                     /locus_tag="VEJ68_00500"
     CDS             1236..>2024
                     /locus_tag="VEJ68_00500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HXX05281.1"
                     /translation="MDWTSLEEKWRTRWYAEKDFESDPNTKKKFFVTVAYPYPNSPQH
                     IGHGRTYTLADVHARFMRMLGYNVLFPMGFHYTGTPILGMARRVQENDKDLIEAFRTL
                     YKVPEENIREFSEPVKIADYFHQEIKAGMIEMGYSIDWRREFTTIDPVYNKFIEWQFR
                     KLKEKGLVIQGTHPVGWCPKDQNPVSQHDTLGDVEPSFTEYTVIKFKNDKYILPTATL
                     RPETIFGVTNLWVNPNINYEIAKVDNEEWIISPECSTKLKFLNKK"
BASE COUNT          738 a          335 c          453 g          498 t
ORIGIN      
        1 tggtattcca gagacagacc ttctttacta taaagaagac ccgcatgagt ttgaggcaaa
       61 agttctgaaa attataaacg gcaaatttgt cgtacttgat aaaacctcct tttatgccag
      121 aggtggcgga caagagcctg accatggtac catttcaaat tatgaagtca ttgatgttaa
      181 caaacatggc aatgttgtgg tacatgaagt aaaaggcggt gtgccacatg aaggagagac
      241 tgtaaggtgc aagatagata ccatgagacg atatggaatt acaaggcacc acagcagtac
      301 tcatgtccta aacgcatcgt caagaaacgt actaggttcg tggatatggc aacattcagc
      361 atttaaggat aaagactatg caagattgga tatcacacat cattcaaatc taacagaaga
      421 agaaattaca aaaatcgagg atcttgcaaa tcttaccatt cgaaaaaata ttccaattct
      481 tatcaatgaa tttgagagag gggatgcaga gcaaaaatat ggatttagaa tataccaagg
      541 tggagtagta ccagtaaaac tagtaagaat agtaaatgtt gaaggattcg atatagaggc
      601 ctgtggagga acacatgtaa aaaagacagg cgagttaggg ttgatcaaaa ttacaaaggc
      661 agaaagaatt caagacggcg tggtcagatt agagtttgtt gcaggcgagg cagcgctaaa
      721 gtatacacaa agtcaggaca agaagatatc acagattgta aaatcacttg gttcaagcaa
      781 ggaaaagctt gttgaatcct ttgatcatgt tgtaaaggat tcagatgacg caaaaaagaa
      841 gctaaagcaa ctaatcaaaa gaacagcgga atcggcagca aaaaacgcaa tatctcaggc
      901 aaagaccatt ggaaaaataa aattatactg tattgtagac gaggagcttg acgaagagta
      961 ccacattgcg gttggcgagc aagcaattgc tcttgacaag tcgttcatct attgctcttt
     1021 aattataaaa aacggctcaa ttcgtatagt atctttttgt ggtcctgacg cttcaaagat
     1081 caaaaaagct ggagatctag tgagagacat gtccaaagta ttgggaggtt ctggaggcgg
     1141 cagagataat tttggacagg gcggaggaaa agacttgctc aagataagag atgccatagt
     1201 tgtagcagag caatccattc ttggaaagtg aaaagatgga ttggacatcg cttgaagaaa
     1261 aatggagaac aagatggtat gcagaaaagg attttgagag tgaccctaat accaaaaaga
     1321 aattctttgt taccgtagca tacccatatc ccaattctcc acagcacata gggcatggta
     1381 gaacctatac tctagcagat gttcatgcca ggtttatgcg aatgttgggc tataacgtgc
     1441 tttttccaat ggggttccat tatactggta caccaatcct tggcatggca agaagggtac
     1501 aagaaaacga taaagatcta atcgaggcct ttagaacatt atacaaggta cctgaagaaa
     1561 atataagaga attctcagag cctgtaaaaa ttgcagatta tttccatcag gagataaagg
     1621 ctggaatgat agagatggga tattccatag attggcgccg agagtttact acaattgatc
     1681 cagtttataa caaattcata gaatggcaat ttagaaaatt aaaggaaaaa ggtcttgtaa
     1741 tacaaggaac tcatccggtt ggatggtgcc ctaaagatca aaatcccgtt tcacagcatg
     1801 atacattggg agatgtggaa ccgagtttta cagaatacac tgtaatcaaa ttcaaaaatg
     1861 acaagtacat cttgcctact gccacgttgc gtccagagac catatttggt gtcactaatc
     1921 tttgggtaaa tcccaacata aattatgaaa ttgcaaaggt agacaacgaa gagtggataa
     1981 tcagtccaga atgctcgaca aaattaaaat ttctaaacaa aaag
//
LOCUS       DASPUS010000022         2637 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1108163, whole genome shotgun sequence.
ACCESSION   DASPUS010000022 DASPUS010000000
VERSION     DASPUS010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2637)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2637
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1108163"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..586)
                     /locus_tag="VEJ68_00505"
     CDS             complement(44..586)
                     /locus_tag="VEJ68_00505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05282.1"
                     /translation="MYSFPNMVFPLLVEGVFLLVRNINFMYEMVDNKNKQDFSYLPEK
                     QSLNENFTNSKKYSTVLHELEKFKKTFGYNGFITIEDQSHMELILKSYADIDKRKILE
                     TTYDASKSIMEIFDSCNVPQTSAYRKVTSLIEDGLLIPDTSVFRHGRKITKYRSIFEN
                     VEINIIRDKVTITVKLTTRK"
     gene            1029..>2637
                     /locus_tag="VEJ68_00510"
     CDS             1029..>2637
                     /locus_tag="VEJ68_00510"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HXX05283.1"
                     /translation="MTKPKILVIGLDSVPSDLLFKKLADRLPNIKHMMETGIFTTLES
                     CHPPITVPAWMVMMSSKNPGRLGVYGFRHRTGFSYTEGWLTNSQTIKEPRVWEILAKE
                     DKKVCLIGVPPTYPPIQVNGKLVSCFITPKDKENFTHPPELSNEIQTLVGKYVFDVKF
                     RTDNRDEIIKNLYEMTEKRFQVIKQMLTKESWDYFMFVEIGVDRLHHMFWKYYDKEHP
                     RYEPGNKYENVIPEYYEYIDKKIGELLSIIDDDTYVLVVSDHGTASMKGAFCINEWLI
                     KEGYLVLKKYPDSVTEIEKCDVDWEKTTAWGWGGYYARIFFNVKDREAQGKIPMSEFA
                     KVRDELKQKIMSISGPNGEKFDNKTFYPDDMYGEAKGSKPDMMVYFDNLYWRSAGTMG
                     HKSLYLSENDTGPDDSVHWMDGVFLLYNKKKNKCTTKLERLSIYDVAPTILDIMDIPI
                     PSDMEGKVSSDVSNWVHDRKNKAFVLWMTGLPCAGKTTIARKMQEYIPNLAVLDGDEL
                     REWLSPKDFSKEGRDEHNRKVAHLAKML"
BASE COUNT          909 a          429 c          503 g          796 t
ORIGIN      
        1 gccaaatctc cagcaacctc gacaaatcgg ttcaattcag atattatttt cttgttgtca
       61 gctttactgt aattgtaact ttatctcgaa ttatattaat ttcaacattt tcaaaaatcg
      121 acctgtattt tgttattttt ctcccatgcc tgaaaacaga cgtatctggg attaacaaac
      181 cgtcctcaat cagtgaggta acttttcggt aagctgatgt ctgcggaaca ttacagctat
      241 caaatatttc cataatagac tttgaagcat cataagttgt ctcaaggatt tttcttttgt
      301 caatatcagc atagcttttt aaaattaatt ccatgtgtga ttgatcttcg attgttataa
      361 aaccattgta accaaaagtt tttttgaatt tttccaattc atgtaaaaca gtgctgtatt
      421 tttttgaatt ggtaaaattt tcgttaaggc tttgtttttc tggaagataa gaaaagtcct
      481 gtttgttttt attgtcaacc atttcataca taaaattaat atttcttact agtagaaaaa
      541 caccctctac caaaagtggg aacaccatat ttggaaatga atacattgga tacccaagag
      601 gtttgattat ttaaaataaa caagtacaat ttaatccact tttctcgcat tacgcgatca
      661 agataatgct gatctgctac aattcgttaa tttgctaggc atgcaataac aatatcatat
      721 tactatacaa ttattttatt ttttaggaat ttttctatgc aaatattgca atagaactaa
      781 cgaaacatat cttttcaaaa ttaaatttaa aaaatattca acccagtttt tttgataaca
      841 aataaaaata taatattttt tgcgatttcc gtttttggaa atcagaattt tttccatgca
      901 taagatccga gcgaacacaa atctttatta tatggtgtac acataacaac gacgggttgg
      961 cagatataga aaaaatatta gtgctatcgt gtgttacatc atacgaattc ggagcgaggg
     1021 tttaaaaatt gacaaagcca aaaatcttag tcattggtct tgattcagtt ccttctgatc
     1081 tgcttttcaa aaagcttgca gacagattgc caaacattaa gcacatgatg gagactggaa
     1141 tatttacaac attagaaagt tgtcacccac caattacagt tcctgcgtgg atggtaatga
     1201 tgtcaagcaa gaaccctgga aggcttggag tttatggttt tcgacatcgt acaggttttt
     1261 catatacaga aggctggttg acaaattctc agaccataaa agaaccgcgt gtttgggaaa
     1321 tcttagcaaa agaagacaag aaggtatgct taattggagt tccaccgacg tatccaccaa
     1381 tacaagtcaa cggtaagctt gtttcatgtt ttattactcc aaaggataag gaaaatttta
     1441 ctcatccacc ggaattatca aatgaaattc aaactctagt tggcaaatac gtatttgatg
     1501 taaagtttag aacagataat cgcgatgaaa taataaaaaa tctttacgaa atgactgaaa
     1561 aaagattcca agtgataaag caaatgctaa ccaaggaaag ttgggattac tttatgtttg
     1621 tggaaattgg agtagataga ctgcaccata tgttttggaa atactatgac aaagagcatc
     1681 ctcgttatga gcctggaaac aaatacgaaa atgtgatacc cgaatattat gagtacatag
     1741 ataagaagat tggcgaactt ttatcaatta ttgacgatga tacatatgtc ttggttgtat
     1801 ctgatcacgg tactgcaagt atgaaaggag ccttttgtat caatgaatgg ttgataaaag
     1861 agggatatct tgtgttaaaa aaatatcctg attcagtgac cgagatagaa aagtgtgatg
     1921 tagattggga aaagaccaca gcatggggct ggggtgggta ttatgcaaga atatttttca
     1981 acgttaaaga tagagaagcg caaggaaaaa ttccaatgag cgagtttgcc aaagtaagag
     2041 atgaactaaa gcagaagata atgtcaatta gcggtccaaa cggagaaaag ttcgataaca
     2101 aaacatttta tccagatgat atgtatggcg aggccaaggg ctcaaaacca gacatgatgg
     2161 tctactttga taatctttac tggcgttcag caggaacaat gggacacaag tctctttacc
     2221 tttcagagaa tgatacaggt cctgacgatt cggttcactg gatggacggg gtctttttgc
     2281 tgtataataa aaagaagaac aagtgcacca cgaagcttga aaggctaagc atatacgacg
     2341 tagccccaac tatcttggat atcatggata ttccaattcc ttcagacatg gaaggaaagg
     2401 tttcaagcga tgtatccaac tgggttcatg ataggaaaaa caaggccttt gtgttatgga
     2461 tgacaggcct tccatgtgct ggaaagacaa ccatagcaag aaagatgcag gaatacatcc
     2521 caaatctggc cgtattagac ggggatgagc taagagagtg gctttcacca aaagactttt
     2581 ctaaagaagg aagagatgaa cataatcgaa aagtagcaca cctagcaaag atgcttg
//
LOCUS       DASPUS010000023         2534 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1520306, whole genome shotgun sequence.
ACCESSION   DASPUS010000023 DASPUS010000000
VERSION     DASPUS010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2534)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1520306"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..592)
                     /locus_tag="VEJ68_00515"
     CDS             complement(<1..592)
                     /locus_tag="VEJ68_00515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HXX05284.1"
                     /translation="MGVEKRMNKKMIQNAKKIDSFLLSRLKGEPTNLYNAARYLIAHG
                     GKRLRPYMVMKSCELLGGDLRQALPAAAAIEMVHNFTLVHDDIMDNDEMRHGVPTVHT
                     KFGIPMGILAGDLLFSKAFETISQPQVKMSKDVRLSLVSTLATACRDVCEGQALDISM
                     AASRTIPTEKEYITMIEKKTSSLFVASCAMGAIAAET"
     gene            complement(571..1260)
                     /gene="idi"
                     /locus_tag="VEJ68_00520"
     CDS             complement(571..1260)
                     /gene="idi"
                     /locus_tag="VEJ68_00520"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010192028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004452 - isopentenyl-diphosphate
                     delta-isomerase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HXX05285.1"
                     /translation="MERNLREPYSEDEIDMEQLILVDSNDNQIGYEEKVKCHLPDGKL
                     HRAFTILLFDKEGRLLLTQRSMSKMLWPGDWDGTVASHPRQSETYVSSAERRLPEELG
                     LSCKLDYLFKFEYHVPYKNIGSENEVCGTLIGIVDDPGKIKLVKDEISTIKWVTLEQL
                     VSEIDKSPEIFCPWMLVALYFLPESNNKVSERHRKILEVWSSGSSNNKKHLEKSLKYH
                     FPNNTWGLKKE"
     gene            complement(1223..1963)
                     /locus_tag="VEJ68_00525"
     CDS             complement(1223..1963)
                     /locus_tag="VEJ68_00525"
                     /EC_number="2.7.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isopentenyl phosphate kinase"
                     /protein_id="HXX05286.1"
                     /translation="MILIKLGGSIITQKQKPLTAKIATTKLIASQLRKIKEPFMVVHG
                     GGSFGHYWSVKYDMHSRPDRYDTKGVAIVKNSMVQLNKLVLDSFLESKLNPYCLPPTD
                     FISEDKPIIKKVLEIPKIAKTGLVPVSYGDVMWFGKNKFYILSGDRIMGILAKILRPR
                     LAIFVTNVDGVYTDMKTKTLIPEIKKEVPVVSDVKMDVTGGMNRKIKEATNIAKNGIR
                     VFFVNGNKPERIVNAINGKKFEGTLFRG"
     gene            complement(2045..>2534)
                     /locus_tag="VEJ68_00530"
     CDS             complement(2045..>2534)
                     /locus_tag="VEJ68_00530"
                     /inference="COORDINATES: protein motif:HMM:NF020133.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="mevalonate kinase"
                     /protein_id="HXX05287.1"
                     /translation="VSTFGGLISFDRNGYEKISSSNDFELVITNSKQVHETREVVKRV
                     KEFKDKNEDLFLNLCNQEKEIVNDALSALKENDLNKLGLLMSKNQELLDKIKVSTEKL
                     DLLIREAKKTSFGAKITGAGGGGCMISLVDKSNSDATVQNLRKINESFVAKIDYSGLN
                     YL"
BASE COUNT          678 a          543 c          406 g          907 t
ORIGIN      
        1 tagtttctgc tgcaatagct cccattgcgc aggatgctac aaaaagagat gatgtctttt
       61 tttctatcat ggtgatatac tctttttcgg ttggtatagt tcgtgatgcc gccatactaa
      121 tgtccaatgc ctgaccctca caaacatctc tacaagctgt tgcaagagtc gaaacaagtg
      181 ataatcgtac atcctttgac attttcactt gcggctgtga tattgtttca aaggcttttg
      241 aaaaaagcag atctccagca agaattccca ttggtattcc aaatttcgtg tgcactgtag
      301 gaacgccatg cctcatctca tcattatcca tgatgtcatc atgtactaga gtaaagttat
      361 ggaccatctc tattgcagca gctgcaggta gtgcttgtct cagatctccg cccaagagtt
      421 cacaactctt catgaccatg tatggtctca gtcgctttcc cccatgtgca atgaggtatc
      481 ttgctgcatt gtacagattt gttggctctc cctttaatct ggacaataga aatgaatcga
      541 ttttttttgc attttgtatc attttcttat tcattctttt ttcaaccccc acgtattatt
      601 tgggaaatga tatttcaatg atttttccaa gtgcttcttg ttattgctac tgccactgct
      661 ccaaacctca aggatcttcc tgtgtctttc tgaaactttg ttatttgatt caggcagaaa
      721 atacaaggcc actaacatcc agggacagaa tatctcagga gatttgtcga tttcagatac
      781 aagttgttct agtgtcaccc actttattgt agatatttca tcttttacca attttatttt
      841 tcccggatca tctacaatac ctatcaaagt tccacaaact tcgttttcag aacctatgtt
      901 cttgtatggt acgtggtatt caaacttgaa cagataatct aacttgcaag ataaacccag
      961 ctcttctggt agtcttcttt ctgctgagga aacatatgtc tctgattgtc ttggatgact
     1021 tgccacggtt ccgtcccaat ccccaggcca aagcatcttg ctcatacttc tctgggttag
     1081 caaaagtctt ccttctttat caaacaaaag aatggtaaag gccctgtgaa gctttccgtc
     1141 tggcaggtgg cactttactt tttcctcata tcctatctga ttatcattgc tgtctacaag
     1201 aatcaattgt tccatgtcta tctcatcctc ggaataaggt tccctcaaat ttctttccat
     1261 ttattgcatt tacaattctt tctggcttgt ttccgttaac aaagaatact ctaattccat
     1321 tttttgcaat gtttgtggcc tcttttatct tacgattcat tccacccgta acatccatct
     1381 ttacatcaga aacaacaggt acttccttct ttatctcagg tatcagagtc tttgttttca
     1441 tatctgtata gacaccatct acatttgtaa caaatatcgc aagacgtggt ctcaagatct
     1501 ttgcaagtat gcccattatc ctgtctccag ataaaatata gaacttgttt ttgccaaacc
     1561 acatgacgtc accataagaa acaggcacca gtccagtctt ggcaatcttt ggaatctcaa
     1621 gcactttttt tattattggt ttatcttcag agatgaaatc agtaggcggt aaacagtatg
     1681 gattcagttt tgattcaaga aatgaatcaa gaactagttt atttaactgg accatggaat
     1741 tcttgacaat tgctactcct ttggtatcat acctatcagg tcttgaatgc atgtcatatt
     1801 ttacagacca ataatgacca aacgagcctc caccgtgcac caccataaac ggctctttta
     1861 tttttcgcag ttgtgatgca attagctttg tagtggctat ttttgcagta agtggttttt
     1921 gtttctgagt aattattgaa ccaccaagtt tgatcaagat catgattttt tacagtgatg
     1981 tactcggttt taaaaagtat ctctctctat atctccaaat catgtacaac tttacggtgt
     2041 cagattacaa ataattcaga ccgctataat ctatcttagc aacaaaagat tcattgattt
     2101 ttcttagatt ttggactgtt gcatcagagt tggatttatc aaccaaggag atcatacatc
     2161 ctccgcctcc agctcctgta atcttggctc caaaggatgt cttttttgcc tcacgtataa
     2221 gaagatctaa tttttcagtt gatactttaa tcttgtccaa taactcttga ttctttgaca
     2281 ttagtaaacc aagtttattc agatcatttt cctttagagc agatagtgca tcattgacaa
     2341 tttctttttc ttggttgcac agattcaaaa ataaatcctc gtttttatct ttgaattctt
     2401 ttacacgctt gacgacctct cttgtttcgt gtacctgttt tgagtttgta ataactaatt
     2461 caaagtcatt actactgcta attttttcat agccatttct atcaaatgaa attagtcctc
     2521 caaatgtaga tacg
//
LOCUS       DASPUS010000024         3415 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_973220, whole genome shotgun sequence.
ACCESSION   DASPUS010000024 DASPUS010000000
VERSION     DASPUS010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3415)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3415
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_973220"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1816)
                     /locus_tag="VEJ68_00535"
     CDS             complement(<1..1816)
                     /locus_tag="VEJ68_00535"
                     /inference="COORDINATES: protein motif:HMM:NF017262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein CopC"
                     /protein_id="HXX05288.1"
                     /translation="MRIRKVNTSLKLVIIIFVALSVLVIVPNIPKSYAHAFVIYSDPA
                     PSTSVNTPPSQIEIDFVDPIDMRYSVIKVLDSNGKAVQNNDWHFITPDHEKTVVTLPT
                     IPDGIYTVYTKVLDAADGHTTTNAFVFAVGVPVPASLLNAKTNISFTDIVSIQDTLAR
                     YPSLLGQIIVVGSTFSTLWLWRPISRISNLKNIFDSTRIKIDRAMIKLTLIGSIIILG
                     GDFAMIAAAAYSINAGLLDAINTSFGNMWLIRLSLSAALFGVTLVTYFHQKKSNAVLS
                     QNHVGILFGIGVAVLVTTTLISHAMASGKILPPIFDFVHNVVSSLWIGGVIYLAFVFV
                     ARLKEMTDDRASLNVLSIVIPRFSVVVISILGIVVVTGPALLYSLENNLSITLASIYG
                     EILIIKLSLAGAMIVLGAFNQRIIQKKAINAIEILPTSHNSTELNGGDSFNNKRKSIV
                     SLFNKSIKIEAIIGFVLIASIALLVDSGTPGIQFQNELAQQQQQIPHVYAFTTPIDLF
                     QNKFTETSITDSGNKIVLSIDPFYAGTNNVTISYLDKNNNPIIINSTNITLEQIDKGI
                     GPLVVNDAQQIAPGVFSINSPAFAIPGHWQAQVEGVTTQ"
     gene            1953..2432
                     /locus_tag="VEJ68_00540"
     CDS             1953..2432
                     /locus_tag="VEJ68_00540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05289.1"
                     /translation="MKTKLIVPIILATAIVAIVPFVIHPAEAHILKTFNMPGTAMPGM
                     PSNVSVKIGWINEPPLVGDTNGIQLFIYNGTDDSAPPIANTGLDNMKVTIQYGGQSKA
                     LNFDASDDTPGEYDTAIIPTQIGTYNVIIQGTIAGVTIPPTTYPMQEVEAKDKYNFP"
     gene            2449..3093
                     /locus_tag="VEJ68_00545"
     CDS             2449..3093
                     /locus_tag="VEJ68_00545"
                     /inference="COORDINATES: protein motif:HMM:TIGR04296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEFG-CTERM sorting domain-containing protein"
                     /protein_id="HXX05290.1"
                     /translation="MKSRNLVIPVVAALTLIIISPYVTHPAEAHILKTFAMQSMPGMN
                     MPSMPANVSVKIGWLHEPPLVGDLNEIDVYVYNGTDDTAPPIANTGLDNMTINVQYGG
                     QTKTLGFDPSDDTPGLYTAALTPDQLGTYNVIIQGTINGTNIPSTTYPMQEVESKDKY
                     YFPPMTGNMPGMNMSNTGTNNAVPEFGPVASLVLVLAIISVVIVTGKTRGFLKF"
     gene            3166..>3415
                     /locus_tag="VEJ68_00550"
     CDS             3166..>3415
                     /locus_tag="VEJ68_00550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05291.1"
                     /translation="MEHTKLTISIILALAMLSPFLFHPAAAQVSQNVINQLESDINDA
                     KNSANTAVQSYSRVAQSFQDVKNTTDTLYMMSLAGIGIG"
BASE COUNT         1113 a          644 c          624 g         1034 t
ORIGIN      
        1 tttgagttgt tacgccctct acttgtgcct gccaatgtcc aggtattgca aatgctggtg
       61 aatttataga aaatacacct ggcgcaattt gttgcgcatc attaactaca agtggtccta
      121 ttcctttgtc aatctgttct aatgtaatgt tagttgaatt gataatgatt ggattgttat
      181 ttttatctag atacgaaatt gtgacattat ttgttccagc atagaatggg tctatagata
      241 aaactatctt atttccagaa tctgtaatgc ttgtttctgt aaatttattt tggaataaat
      301 ctattggtgt agtaaatgca taaacatgtg ggatctgttg ttgctgctgt gctaactcgt
      361 tttgaaattg aataccgggt gttccggaat caacaagtaa tgctatcgag gcaataagca
      421 caaacccaat tattgcttca attttgatac tcttattgaa tagagataca attgattttc
      481 ttttattgtt aaaactatct ccgccgttta attctgtact attgtgactt gttggtaaaa
      541 tctcaatggc gttaatggcc ttcttctgga taattctctg gttaaaggca cctagtacaa
      601 tcattgctcc agctaatgaa agttttatga tgagtatctc cccatatatt gatgcaagag
      661 taattgaaag attattttca agcgagtaca aaagagcagg acctgtaacc acaactattc
      721 caagaatcga aatgactaca acagaaaacc ttggtataac tattgacaaa acattcagac
      781 ttgcacggtc atcggtcatt tcttttagtc ttgcaacaaa aacaaaggca agataaatca
      841 ctccgccaat ccacagggat gatactacat tgtgaacaaa atcaaaaatt gggggcagta
      901 ttttaccgct tgccattgca tgacttatca aagtggtagt tacaagcact gcaactccga
      961 ttccaaataa aatgccaaca tggttttggg ataaaaccgc attcgatttt ttttgatgaa
     1021 aatatgtaac caatgtaacg ccaaataggg cggcagaaag tgataatctt atcaaccaca
     1081 tgtttccaaa acttgtgttt attgcatcca atagaccggc gtttatagaa tatgccgcag
     1141 ctgcaatcat tgcaaaatct ccgcctagaa taattatcga accaatcaag gtcaacttga
     1201 tcatagctct gtctatcttg attcgagttg aatcgaagat atttttcaga ttggaaattc
     1261 gtgagatagg tctccataac cacaatgttg agaaagtaga acctacaaca attatctgtc
     1321 ctaaaagtga agggtatctc gcaagcgtgt cttgtattga aactatatct gtaaaactaa
     1381 tgtttgtttt tgcattcagt aggcttgcag gaactggaac tccaacagca aagacaaacg
     1441 catttgtggt agtatgacca tccgcggcat ccagtacttt ggtgtaaaca gtgtaaattc
     1501 catctggaat ggtaggtaat gtgacaacag tcttctcatg gtctggtgtg ataaaatgcc
     1561 aatcattatt ttgtaccgct tttccgttgg aatctagaac ttttatcaca ctataacgca
     1621 tgtcaatagg atccacaaaa tcaatctcaa tttgtgatgg cggggtattg accgatgttg
     1681 atggtgcagg atcgctatag attacaaatg catgcgcata cgattttgga atattgggga
     1741 ctataacaag tacagataac gccacaaaaa ttattatgac aagttttaac gaagtgttta
     1801 ctttcctaat tctcatcatc aattcacatc tttcattacc atttaaaatt taatatgata
     1861 gtggtacaaa tacaaaacaa ctaattactt acctatttta cttttgtacc agaatctata
     1921 taagaaaacc agttacctat gtcctgtata tgatgaaaac aaagttgata gtgccaataa
     1981 ttcttgccac agcgattgta gcaattgtac catttgtaat acatcctgcc gaagctcata
     2041 ttcttaaaac attcaatatg ccaggaacag caatgccggg aatgccatct aatgtatcag
     2101 taaaaattgg atggataaat gaaccaccac ttgttggaga cacaaatgga attcagctat
     2161 tcatatacaa tggaaccgat gatagcgcac caccgatagc aaatactggt ctggacaaca
     2221 tgaaagtaac catacaatat ggaggacagt ccaaagcact gaactttgat gcaagtgatg
     2281 atactcctgg cgaatatgat actgcaataa tcccaaccca aattgggacc tataacgtaa
     2341 ttattcaggg aaccatagcg ggagtaacta taccgcctac cacttatcca atgcaagaag
     2401 ttgaagccaa ggacaagtat aactttcctt gagcaacggt gagaggttat gaaatctaga
     2461 aatttagtaa ttcctgtagt ggccgctttg acattaatta taatctcacc atatgtgact
     2521 catcccgcag aagctcatat tctaaaaaca tttgcaatgc aaagtatgcc tggcatgaac
     2581 atgccatcaa tgcctgccaa tgtttcagtc aaaattggct ggttacatga gcctccactc
     2641 gttggcgatt taaatgaaat tgatgtatat gtatataatg gaaccgatga cactgcgcca
     2701 cctattgcaa atacaggtct tgataatatg accataaatg tgcaatatgg aggtcaaact
     2761 aagacacttg gctttgatcc aagcgatgat acccctggcc tgtatactgc ggctcttact
     2821 ccagaccagc tcggaactta caatgtaatt atacagggaa ccattaatgg aacaaatatc
     2881 ccatctacaa cttatccaat gcaagaagtg gaatcaaaag acaagtatta ctttcctcca
     2941 atgaccggaa acatgccagg aatgaatatg tcaaatactg gaacaaacaa tgcggtacca
     3001 gaatttggtc cagttgcatc attagttctg gtgcttgcaa taattagtgt tgtaatagtt
     3061 accggtaaga cacgaggatt tttaaaattc taaaccgtta atcttttgat tttgtaccat
     3121 aacgtattta tgaaaactgg agttttttta ctgtaaggaa atgatatgga acacacgaaa
     3181 ttaacaatat ccataattct tgctttggct atgctttctc ctttcttgtt tcatcctgcg
     3241 gcagcacaag tctctcaaaa tgtcataaat caactagaaa gtgatatcaa tgatgcaaaa
     3301 aattcagcaa atactgctgt acaaagctac tcgagagttg cacaatcttt tcaggatgta
     3361 aaaaatacca ctgatacctt atacatgatg tcgcttgcag ggataggtat tggtg
//
LOCUS       DASPUS010000025         3485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_699562, whole genome shotgun sequence.
ACCESSION   DASPUS010000025 DASPUS010000000
VERSION     DASPUS010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3485)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3485
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_699562"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..319
                     /locus_tag="VEJ68_00555"
     CDS             <1..319
                     /locus_tag="VEJ68_00555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HXX05292.1"
                     /translation="PIWHIDPLEYLHRLIESKFRFIITSVSSEGLDNSWLGKEITFQD
                     INKLDQLSSKYGFNLSFEGGEAETFVIGCPIFSGTIKIVKSNTVWDGYRGRFEITEAV
                     LEH"
     gene            319..1641
                     /locus_tag="VEJ68_00560"
     CDS             319..1641
                     /locus_tag="VEJ68_00560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008298513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HXX05293.1"
                     /translation="MLDSLKTGLRAALKKIVNSSAIDEALIKELAKDIQRALLQSDVN
                     VKLVFQITKNLEERSLKETPPPGLSRKDHIVKILYEELSKLLGTDEEYKFQPGKMNKV
                     LMLGIQGSGKTTITAKLSKFLTKQGYRVSVIGADTYRPGALTQLKTMCEKTNVEVYGE
                     EQNKDSPEIVKNGLKYFEGKNFDVVLIDTAGRHKEEKDLLDEMTRISKVADPDLALLV
                     IDGTIGQQCYNQAEAFHKTVPVGGIIITKLDSSAKGGGALAAAAATGAKIMYIGTGER
                     IDDLEKFMPTRFVGRLLGMGDIQALLDMAKRLETEGNEERLKRITHGKMNMEDFYFQI
                     EEATKAGGLRNILENMPGFSGMVKEDQLEQQEERMERWRYVIQSMTKEEKADPDIVNA
                     SRVKRIARGSGWSEHEVKELLKAYKNSKTMMKASKGRQLQGMLRKMGL"
     gene            1717..2397
                     /locus_tag="VEJ68_00565"
     CDS             1717..2397
                     /locus_tag="VEJ68_00565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HXX05294.1"
                     /translation="MNNYQCYQILGLSEGASIKDVKAAYRKLALKCHPDKNNTDQDGK
                     KFKLITEAYQLLKSEYKRSIGINSNHKKYDDKNSNNKYDFDSKKYSWGARESDKTPQE
                     DWSKHSKYAENTYRDFWKYYEQTFWDYYERIRANTKAETEQIHVEYDVPVSVNVDPER
                     CIACCSCETIAPKVFHVEKNVRVNPKSRVINEDGAKSSKILDAAHTCPTKAISVTDKE
                     SCQRLYPY"
     gene            2454..>3485
                     /locus_tag="VEJ68_00570"
     CDS             2454..>3485
                     /locus_tag="VEJ68_00570"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR01213.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0031119 - tRNA pseudouridine synthesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(54/55) synthase Pus10"
                     /protein_id="HXX05295.1"
                     /translation="MDKKKLAEVIEDSRKILQEHPLCDHCIGRMFAGKLKVLSHKRLG
                     FKIRKKLKQRQPKLCYICKGLMSELDTHLMKILHLSKEYEFSTFLIGAILQPSIHDRD
                     DLLRSKFKLRGITSIKSDVTREMGKWFSRKTRTNVNYQNPDVVFTIDFKKVQYEIKPK
                     SVLLQGRYTKNKRGLPQKQKSCDQCEGKGCFVCDFHGIKEFNSVEGKIVKFLIEKFGA
                     QQAKITWIGSEDETSLVSGSGRPFFTKLVNPHRRSITFSKNIGLNGISIHNLHTISKI
                     PMDPIKFRTSVVLQVETESELKSGILKELKKLKGQSVSLYENSGHKNKKKIYSIKFAK
                     KSNKSFTVQM"
BASE COUNT         1327 a          537 c          701 g          920 t
ORIGIN      
        1 tccgatttgg catattgatc cattagaata tctacataga ttaatagaat caaaatttag
       61 atttattatc accagtgttt catctgaagg acttgataac tcatggcttg gtaaagaaat
      121 tactttccaa gatatcaaca agttagatca attgtcatca aaatatggtt ttaatttgtc
      181 ctttgaggga ggggaagcag agacatttgt gataggatgt ccaatttttt ctggaacaat
      241 aaaaatagta aaatcaaata cagtatggga tggttacagg ggaaggtttg aaataaccga
      301 agctgtctta gagcactaat gttagatagt cttaaaacag gccttcgagc tgcattaaaa
      361 aagattgtaa attcatctgc aatagatgaa gctctaatta aggaattggc aaaagacatt
      421 caaagagcac tactacaatc cgatgtaaat gtaaaactgg tatttcaaat tacaaaaaac
      481 ctagaagaaa gatctcttaa agagacgcct cctccaggac tctcacgaaa agatcacatt
      541 gttaagattc tctatgaaga actttccaag ttattgggta ctgatgagga atacaaattc
      601 caacctggaa agatgaacaa agtcttgatg cttggaattc aaggaagcgg aaagactact
      661 attactgcta aactttccaa gtttctaaca aaacaaggat atagagtatc tgtgattggt
      721 gcagacactt acaggcctgg cgctttgaca caacttaaga ccatgtgtga aaagaccaac
      781 gttgaagtct atggtgaaga gcaaaacaag gattctccag aaattgtaaa aaatggtctc
      841 aaatattttg aagggaaaaa ctttgacgta gtattaattg atacagcagg aagacacaag
      901 gaggaaaaag acctcttaga cgagatgacg cggattagta aggttgctga tccagatctt
      961 gctttattgg taattgatgg tactattggc caacaatgtt acaaccaagc agaagcattt
     1021 cacaagacgg ttccagtcgg tggtattata atcacaaaat tggacagtag cgcaaaaggt
     1081 ggtggcgcac ttgcagcagc tgctgcaaca ggagccaaaa taatgtacat tggaacaggt
     1141 gaaagaattg acgatctcga aaaattcatg ccaactagat ttgttggcag gctacttgga
     1201 atgggtgata ttcaagcctt acttgatatg gcaaaaagat tggaaaccga aggaaatgag
     1261 gagaggctga aacgtatcac acatggtaaa atgaatatgg aggattttta ctttcaaatt
     1321 gaagaagcta caaaggctgg aggtctacga aatattttgg aaaatatgcc tggattctca
     1381 ggtatggtaa aagaggatca gctagagcaa caagaagaaa ggatggaaag atggagatat
     1441 gtgattcaat ctatgacaaa agaagaaaaa gcagatcctg atattgtcaa tgcttctcgt
     1501 gtaaaacgaa ttgctagagg ctctggctgg tcagaacatg aggtaaagga actactcaag
     1561 gcatataaaa attcaaagac tatgatgaaa gcatccaaag gacgacagct acaaggcatg
     1621 ctacgaaaga tgggtctgta ggtctctagc aaattagaaa ctttaaccct tgacaaatca
     1681 aacatatttt taaaatagta tgactaaatt ctattattga ataactatca atgttatcag
     1741 atacttggat tgtcggaagg tgcatccata aaggatgtaa aggcagcata taggaagtta
     1801 gcactcaagt gtcacccaga caaaaataac acagatcagg atggaaaaaa atttaagctg
     1861 attacagagg cctatcaact tctcaagtct gaatataaaa gaagtattgg aataaactca
     1921 aatcacaaaa aatatgatga taaaaattca aacaataaat atgattttga ctcaaaaaaa
     1981 tattcatggg gagcaaggga atcagacaag actcctcaag aggattggag taaacatagc
     2041 aaatatgcag aaaacacata tcgagacttt tggaagtact atgagcaaac attttgggat
     2101 tattatgaaa ggataagagc gaatacaaaa gccgaaaccg agcagattca cgtagaatat
     2161 gatgtgcctg tatccgtaaa cgttgatcca gagcggtgta tagcctgttg cagttgcgaa
     2221 actattgctc caaaagtgtt ccatgtagaa aaaaatgtac gtgtaaaccc aaaatcacga
     2281 gtgataaacg aagatggagc aaagtcgtcc aaaatacttg atgctgcaca tacttgccca
     2341 acgaaagcaa tcagtgtcac agataaagaa tcctgtcaaa gactatatcc atactaattt
     2401 attgtatatt ttcctgaatt aggaataata catgccttat ttacaataat caaatggaca
     2461 agaaaaaact agcggaggtt atagaagaca gtaggaaaat cttgcaagaa catccgttat
     2521 gtgatcattg tattggcaga atgtttgctg ggaaactaaa agtattatct cacaagagac
     2581 ttggatttaa aatcaggaaa aaactaaaac aaagacaacc aaaattatgt tacatatgta
     2641 aaggtttgat gtctgaactg gatacacatc tcatgaaaat attgcatcta tctaaagaat
     2701 atgaattctc tacgtttctc attggtgcaa tcttacagcc gtcaatacat gatcgggatg
     2761 atctattacg ttctaaattc aaacttcgag gaattacaag tataaaaagc gatgtaactc
     2821 gagagatggg aaaatggttt tcccgtaaaa cacgtaccaa cgtaaattat caaaatcccg
     2881 atgtagtttt taccatagat ttcaaaaagg ttcaatatga gataaaacca aaatctgtcc
     2941 tactgcaagg tcgatatacc aaaaacaaaa gaggattgcc acaaaaacaa aaatcatgtg
     3001 atcaatgtga aggaaagggc tgttttgttt gtgattttca tggaataaaa gaatttaaca
     3061 gtgtggaagg aaagattgtt aaatttttaa ttgaaaagtt tggtgcgcag caggcaaaaa
     3121 ttacttggat aggaagtgag gatgaaacta gtcttgtatc gggtagtggt agaccatttt
     3181 ttacaaaact tgtaaatccg cataggagga gtatcacttt ttctaaaaat attggtttga
     3241 atggtatttc aattcataac cttcacacca tatcaaaaat tcctatggat cctataaaat
     3301 ttagaacaag tgttgtgttg caagtggaga cagaaagtga actcaaatct gggatattaa
     3361 aagagctaaa aaagcttaaa ggtcaatcag tatctttgta cgaaaattca ggtcacaaga
     3421 acaaaaaaaa gatctacagc atcaaatttg caaagaaatc taataaatca tttacagtcc
     3481 aaatg
//
LOCUS       DASPUS010000026         2194 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_16530, whole genome shotgun sequence.
ACCESSION   DASPUS010000026 DASPUS010000000
VERSION     DASPUS010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16530"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..488)
                     /locus_tag="VEJ68_00575"
     CDS             complement(<1..488)
                     /locus_tag="VEJ68_00575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP cone domain-containing protein"
                     /protein_id="HXX05296.1"
                     /translation="MTDFSQIENSIIEVKKRDGRVSSFQKDKISNAVYKALIACGRPD
                     HGLADKLGNRVIEKLVNHGYSASELPSVEDVQDMVESTLIDEGLGEIAKAYILYRHER
                     RRIRDEKMKVLESKGLDPVAKKFDLNCLRVLASRYLLRNNKGQITESPGEMFERVAML
                     VGV"
     gene            complement(715..>2194)
                     /gene="nrdD"
                     /locus_tag="VEJ68_00580"
     CDS             complement(715..>2194)
                     /gene="nrdD"
                     /locus_tag="VEJ68_00580"
                     /EC_number="1.1.98.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008998 - ribonucleoside-triphosphate
                     reductase activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HXX05297.1"
                     /translation="ITNVDGIHNGAEGLLFKTGQTVFGEYLVLNTLPKDVADSHLSGD
                     IHITNAGLWSLLPDTIFVNIKELIDDGIDLRGKFLGVTRISAPTSLDELATSLSVLTS
                     LLIKEASQEVVMDGLVSLLQKYSKNTTDIEEKIANSFAKISTATKYGKNGTIASFRIS
                     LGTEPKIIGTILAAYKKYAKSTPIPSIGLIIDYEKGKISEFSDILSNIIALGGRIVFS
                     KGLVSNKGLSRGDSKNTGATSINLQSLSINMPRLAFESNKDETYFRARLALLMKPALS
                     AMSLRKKEISDLTRRGLNPILASNTQYMQKGSVSLVVNLIGLKEAIYGILGYENNKAG
                     QEILAKVVTTAMEVASKKGKEMGDNVSISITESDAASRFSSLDGEKYGKMSIHQHLEG
                     ESYSEGSIIDASEIEGMTLKSEKIAESNHLAKMLNGGLLVHLKIPDNMEVSGIKKVIE
                     KAGELLGSFRPVRKVPICSNCGLKEEKINEKCPVCKSPYILA"
BASE COUNT          609 a          451 c          362 g          772 t
ORIGIN      
        1 acccctacta gcattgctac tcgttcaaac atttctccag ggctttccgt tatctgacct
       61 ttgttgtttc ttagtagata tcgcgaagcc aagactctaa ggcagtttag atcaaatttc
      121 tttgcaacag gatcaaggcc ctttgattcc aaaaccttca tcttctcatc tcttattctt
      181 ctgcgttcat gtctgtatag tatgtaggct ttggcgattt caccaagtcc ctcatctatc
      241 agagttgatt cgaccatatc ttgtacgtct tcgacacttg gtaattctga tgcagaataa
      301 ccgtgattta cgagtttttc aattacacga ttgccaagtt tatctgctaa accatgatcg
      361 ggtctaccgc atgctatcaa tgctttgtag actgcatttg aaattttatc tttctggaac
      421 gatgatactc gtccatcacg cttcttgact tcaatgatcg aattttctat ttgtgaaaaa
      481 tctgtcaact tatactcccc gcaacaggta tcaaaaaaga gttagataaa ccctgcggca
      541 aaattttttt ttctaatgtt gagctttgga tcaattttgt tgacaccgtt acaattttca
      601 tgataataga tcattttgtc ccaatatatt tctaaaaaaa attctataaa attaagctac
      661 tttcgatcaa tattttgaaa ttctttattc agtgatttta tgctagcctt atcttcaagc
      721 aagtatgtat ggagatttac agactgggca cttttcatta attttttctt cttttagtcc
      781 acagttacta cagataggaa cctttcttac tggcctaaag gaacctaata gctcgcctgc
      841 cttttcgatc actttcttta ttcctgacac ctccatatta tcaggaatct ttaggtgtac
      901 tagcaatcct ccatttagca tcttggccag atgatttgat tctgcgatct tttcgctttt
      961 tagagtcatt ccttcaatct cagaggcatc aataatagat ccctccgaat aggattcccc
     1021 ttctagatgc tgatgaattg acattttccc atatttttca ccatctagag acgaaaagcg
     1081 tgaagcagca tcactttcag ttatagatat ggatacgttg tcgcccattt cctttccttt
     1141 cttagaggcg acttccatgg cagtggtcac aactttggcc aatatttctt gtccagcctt
     1201 gttattttca taaccaagaa tgccgtaaat ggcttctttc agaccaatta aattaacaac
     1261 caacgaaaca gatccttttt gcatgtactg tgtattgctt gcaagaattg gattcagtcc
     1321 tctacgtgtt aaatcagaga tctccttttt tcgcaatgac attgcagata gggctggttt
     1381 catcaacagt gccaatcttg ctctaaagta agtttcgtct ttgttggatt caaatgcaag
     1441 ccgaggcatg ttaatagata aggattgtag attgatagaa gttgcaccag tattcttaga
     1501 gtctcctctt gacaaccctt tgttagaaac aagtcctttt gagaatacaa ttcgtcctcc
     1561 taatgcaatt atgttagaga ggatatcgga aaattcactt atctttcctt tttcataatc
     1621 aataattaat ccaatagaag gaattggcgt tgactttgca tattttttgt aagcagcaag
     1681 aatggtacct attatctttg gttcagttcc aagtgaaatt ctaaaagatg cgatggtacc
     1741 attctttcca tattttgtcg ctgttgatat ttttgcaaag gaatttgcta ttttttcttc
     1801 aatatctgta gtatttttag aatatttttg taacaaagac accaatccat ccattacaac
     1861 ttcttgtgat gcttccttta tgagcaagct cgtcaaaact gacagtgagg tagcaagttc
     1921 atcaagagaa gttggtgcag atattcttgt aactcccaag aattttcctc gaagatcaat
     1981 tccatcgtct attaactctt taatattgac aaaaatggta tctggaagaa gagaccaaag
     2041 cccagcattt gtaatatgaa tgtctccaga cagatgggaa tcagcaacat cctttggcaa
     2101 tgtgtttaga actagatatt cgccaaaaac tgtctgccct gtcttaaata gcagaccttc
     2161 tgctccatta tgtataccgt ctacattggt tatc
//
LOCUS       DASPUS010000027         2058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1386334, whole genome shotgun sequence.
ACCESSION   DASPUS010000027 DASPUS010000000
VERSION     DASPUS010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2058)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2058
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1386334"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..126
                     /locus_tag="VEJ68_00585"
     CDS             <1..126
                     /locus_tag="VEJ68_00585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske (2Fe-2S) protein"
                     /protein_id="HXX05298.1"
                     /translation="ECPLHFWHYNIKTGELVDYIKGVKLQTYKVDVKKDGIYLEL"
     gene            271..585
                     /locus_tag="VEJ68_00590"
     CDS             271..585
                     /locus_tag="VEJ68_00590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05299.1"
                     /translation="MITVTNVYADRLGSQQNPYSVYYGWQGAGYYYFTASNYKTGYVS
                     DLCQLNSISIKLTGNPLEHPFDPNQIGKCMTTVPEFGPLAGTVILTSIVGIILFSRVF
                     RF"
     gene            686..1477
                     /locus_tag="VEJ68_00595"
     CDS             686..1477
                     /locus_tag="VEJ68_00595"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008299286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HXX05300.1"
                     /translation="MLNRQIIEEIIKKDYNIIQNKIGSFLVDEIASRKSQGLIFGLSG
                     GIDSAVLAMLCAKFMREKTLVLIMPDAKITPPLDTEDAIKIVDSLHLEYKLIDIGFIH
                     KEYSKYLEPNPLAFGNLGARIRANILYYYANARNYLVLGAADRSEFLIGYFTKFGDGA
                     ADLLPLVSLYKTQIREFAKFLNVPNNIISKPSGPRLWEGHLAETELGIEYDKIDSILY
                     CIIDKGLSLEETAKITTIPISDVDRIYQMNKKSDHKRITPKTCII"
     gene            1489..>2058
                     /locus_tag="VEJ68_00600"
     CDS             1489..>2058
                     /locus_tag="VEJ68_00600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HXX05301.1"
                     /translation="MKIFDTLSVKEKELDTLHQVRIYVCGVTVYDESHIGHARTIIVF
                     DSLRRFLESLEIKVKFIQNFTDVDDKIINRSKAENIPSDKITAKYIASYFDGFDKLNV
                     KRADSYPKATEHISDMIELVKGLVEKNIAYVSKHGVYFSVSKFKEYGKLSKKKVEELI
                     SGARVEVDETKKDPLDFALWKFADDEPNWP"
BASE COUNT          756 a          325 c          376 g          601 t
ORIGIN      
        1 gaatgccctc ttcatttctg gcattacaac ataaagactg gagaactcgt tgactatatc
       61 aaaggtgtaa aactgcaaac ctacaaagta gatgtaaaaa aagatggcat ctacctagag
      121 ttgtaaaagg tttaatcata tctctaagga tcctaaagaa ttctcgaata gaatcaatct
      181 agaacgaata agtttattga gttctgacaa gcatacacgt tattgcatcg gattaaatta
      241 atccttgtac aaataactat tttaatttgc atgataacgg tcacaaacgt atacgcggac
      301 cgacttggct cgcagcagaa tccatattca gtatattatg gatggcaagg tgccggatac
      361 tactatttta ccgctagcaa ctacaagacg ggttatgttt ccgatttatg tcaacttaat
      421 tcaataagca taaaacttac gggaaatcca ttggaacatc ccttcgaccc caatcaaatt
      481 ggaaaatgta tgaccactgt accagaattt ggaccattag ctggaacagt aatattaaca
      541 tctattgttg gcatcatatt gttttcaaga gtatttagat tctaaacact catcagatga
      601 catgatttag atgatttgac gtaatctaga aaatttctct gtttttaata acattaagtt
      661 taattcgcta ggatcaaatt aaaaaatgtt gaatcggcag ataatagaag aaattataaa
      721 aaaagattac aacatcatac aaaacaagat tggttctttc cttgtagacg aaattgcatc
      781 cagaaaatcg caggggctaa tctttggatt gagcggtgga attgattcag ctgttcttgc
      841 aatgctttgt gcaaaattta tgcgtgaaaa aacacttgta ttaataatgc ctgatgcaaa
      901 aataactcct ccattagata cagaggatgc aataaaaatt gtagatagtt tgcatctcga
      961 atacaaatta attgacatag gattcattca taaagaatat tcaaaatacc tggaaccaaa
     1021 tcctctggca tttggaaact tgggtgcaag aattagagca aacattctgt attattatgc
     1081 aaatgcaaga aattatcttg ttctgggtgc cgcagacaga agcgagtttt tgataggata
     1141 ttttacaaaa tttggagatg gagcagcaga cttgttacct ttagtttcat tgtataagac
     1201 tcaaattcgc gaatttgcaa aatttctcaa tgttccgaac aacatcatat caaaaccaag
     1261 tggtcctcgc ttatgggaag gtcatttagc tgaaactgag ttggggatag aatacgataa
     1321 gattgattct attctatatt gtatcataga caaaggatta tcacttgaag agactgcaaa
     1381 aattacgaca ataccaattt cagatgtaga taggatttac cagatgaata aaaaaagtga
     1441 tcataagaga ataacaccga aaacatgtat tatatgagag gataaaattt gaaaattttt
     1501 gatacgttat cagtaaagga aaaagaactt gacactttgc atcaagttag aatctatgtt
     1561 tgtggagtta ccgtatatga cgaaagccac ataggtcatg ccagaacaat aattgtgttt
     1621 gattcactga gaagattttt ggaatcactg gaaataaagg tcaagtttat acagaatttc
     1681 accgatgtag atgacaaaat aatcaatcgc tcaaaagctg aaaatatacc tagtgataaa
     1741 ataactgcaa aatatattgc aagttatttt gacggctttg acaaactaaa tgtcaaacga
     1801 gctgactctt atccaaaagc aactgaacac atttccgata tgattgaact agtcaaaggc
     1861 ctagttgaaa aaaatattgc ctatgtttca aaacatggag tatatttttc agtatcaaag
     1921 ttcaaagaat atggaaaact gtcaaagaaa aaagtggagg agttgatctc aggagcaaga
     1981 gtcgaggtag atgagactaa aaaagatcca ttggatttcg cattatggaa atttgctgac
     2041 gatgaaccca actggccc
//
LOCUS       DASPUS010000028         3455 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1797368, whole genome shotgun sequence.
ACCESSION   DASPUS010000028 DASPUS010000000
VERSION     DASPUS010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3455)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3455
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1797368"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            288..1013
                     /locus_tag="VEJ68_00605"
     CDS             288..1013
                     /locus_tag="VEJ68_00605"
                     /inference="COORDINATES: protein motif:HMM:NF024804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HXX05302.1"
                     /translation="MSGNDTDEESDLSVFAEEHIEIMSTEDERIKIIGEELANDTGRA
                     IFGKISQGISSSNDLAKALNVSLPLVTWHINRLLSVGLIKIEKIEMSSKNKKMKYYGP
                     VKTALVIIPPENPNDGAPNSKKDTILMKLRHYIASFAAAIVGGATIYMVGQGQTSQQP
                     PSANLPQETAPQAASSIHAAIKTAPLAAPETSPASSIFIGDQTLMIISIICGAAIFFA
                     VFFGIWFAKKSKDKKLKHKQQSI"
     gene            1134..1916
                     /locus_tag="VEJ68_00610"
     CDS             1134..1916
                     /locus_tag="VEJ68_00610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402764.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HXX05303.1"
                     /translation="MTTKTKMMLAVFAAVVIVSTAVFAGMQNSNKAYGQQAPDLYPSR
                     ERTISVTGSATTSISPDQLNLQFGVDTQAKTAQDAISSNSQAMNAVVSAVESLGITQD
                     EISTASFTVSPVYNDSTPYPTDVYHKPVLVGYMVSNTLLVKTTKLSLAGNIIDAAIGA
                     GANRVDDVSFSLSPDKQQSVQDSLLNKAVLNAKDRAGKALDPLGQKIIGVKMVNISEF
                     NMPPPPKYYAAMSVAAVPSTPIFTSNQDVTTSVDVTFLIGDQ"
     gene            2019..2249
                     /locus_tag="VEJ68_00615"
     CDS             2019..2249
                     /locus_tag="VEJ68_00615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008298485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HXX05304.1"
                     /translation="METAYVMINCEMGSESSVIEKIKPVQCVKEIRGVFGNYDLLIKL
                     QGTTIDEISETITTKIRGIEKIRCTTTLICYR"
     gene            2345..3292
                     /locus_tag="VEJ68_00620"
     CDS             2345..3292
                     /locus_tag="VEJ68_00620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013482540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HXX05305.1"
                     /translation="MEIMGRGFRQIVQEIPCYYHIFTKIAGYKLFHKRSPMYGSADII
                     NVCNLHCEHCYWWLNRKENEELTVDQWKKVIDEKFKKNNVFVITLVGGEPTLRPDVIE
                     LFVQEFPKRICIVSNGTIPLKRYENLYFYWISIDGNQEIHDKIRGENAWDRTRKNVVD
                     YVEKNGDLAYKDIWITMTINALNYKTVKKVMEDWYDYSNKIGFQFHTPFMKNDPLWLP
                     FGEERTRVVEEIKKMKKKYPDYIINPDGQLDVMKRSWGGKGTTPVDCPTWAIVSVDHM
                     GREKRPCCIGSAENNSMKPICEDCGLGCYSVLIPHGIKG"
BASE COUNT         1204 a          587 c          675 g          989 t
ORIGIN      
        1 ttgtttatct ctagcaaggt tttttcgatc gcaagtgtta ctaacgtctt cctagtgtca
       61 ttttgcattt taattgacaa tactcctaca gtttagttcc atagataatg ttacattaca
      121 gttactaaaa gaagagtgga aaatattgtc attttccagt tccgagatgg aataattttt
      181 ctagcttaga taattgaaaa ttgaataatg gataataaaa tttgtgcaca aatgtatagc
      241 gagatatatc gtcatagatt ttaaagggaa actgtggaag ttaggtaatg tctggtaatg
      301 acactgatga agaatcggat ctatccgtat tcgcagagga acacattgaa ataatgagta
      361 ctgaggatga aagaatcaag attataggtg aagagcttgc aaatgacacc ggaagagcaa
      421 tttttggaaa aatttctcaa ggcatctcaa gctcaaatga tctggcaaag gcactaaatg
      481 tttcattacc tcttgttact tggcacataa accgactcct aagcgtaggc ctgataaaga
      541 tagaaaaaat tgagatgagc tcaaaaaata aaaaaatgaa gtattacgga ccagtcaaga
      601 cagcacttgt cataatacct cctgagaatc caaatgatgg tgcccctaac tcaaaaaaag
      661 atacaatact tatgaaatta aggcattaca ttgctagctt tgcagctgca attgtaggag
      721 gagcaacaat ttacatggtg gggcaaggtc agactagtca acaacctcca tctgccaatc
      781 tgccacaaga aacagcacct caagcagcca gttctattca tgctgcaata aaaactgctc
      841 cacttgcagc acctgagacc tcacccgcct catcgatttt tattggcgac caaacgctta
      901 tgataatttc tataatatgt ggggctgcta ttttctttgc tgtctttttt ggaatttggt
      961 ttgctaaaaa atcaaaagat aaaaaattaa aacataaaca acagtccatc taatcactcg
     1021 atgataaaca aaaaatatgt aatgcataaa atcttgttac aatttttgat aaaaaatatg
     1081 ttaaaatgaa atttaatcaa agcctataag cttcgctaaa cattacattg gtaatgacaa
     1141 ctaaaaccaa aatgatgctt gctgtatttg ctgctgttgt aattgtttca actgcagttt
     1201 ttgcaggaat gcaaaactca aataaagcat acggccagca agctccggat ctttatccat
     1261 caagagagcg aactatttca gtgacaggat ctgctacaac ttcaatctca ccagatcagt
     1321 taaatctgca atttggtgtt gatacgcaag ccaaaacagc tcaggatgct ataagttcaa
     1381 actcgcaagc aatgaatgct gtagtatccg cagttgaaag tcttggtata acacaagatg
     1441 agattagtac tgctagcttt acggtctcgc ctgtctacaa cgattctact ccatatccaa
     1501 cggatgtata ccataaacct gttcttgtgg gatatatggt ttcaaataca cttttggtca
     1561 aaaccaccaa actgtctctt gcaggaaaca taattgatgc tgcaattgga gcaggcgcaa
     1621 acagagtaga tgacgtatct ttctccttgt ctccggataa acaacaaagt gtacaagata
     1681 gtcttctaaa caaagctgta ctaaatgcaa aagacagggc aggaaaagca ttagatccac
     1741 tgggccagaa gattattggg gtaaaaatgg taaatatctc tgaattcaat atgcctccac
     1801 ctccaaaata ttatgctgca atgtctgtag ctgcggtacc cagtactcca attttcacat
     1861 caaatcaaga tgtcacgaca agtgttgatg tgaccttcct aattggggat caataaacca
     1921 cccctttctt attttttatt gcactgggat tagattttga tgtattttct ctcttgtttg
     1981 tgaaaatttg atatattatg atcacgttat gatctaggtt ggagacagca tatgtcatga
     2041 tcaactgtga gatgggatca gaaagttctg ttatcgaaaa aataaaacca gttcaatgcg
     2101 tcaaagaaat tcgtggtgta tttggtaact atgacttgtt aattaaactt caaggtacca
     2161 caattgatga aataagcgaa accataacta caaagattcg aggaatagag aaaatacgtt
     2221 gtactactac actgatctgc tatagatgaa tttctaataa cagatgtacg taaaccatgg
     2281 tgaacaaact atcaatgtaa aaatggcaac atcttttaag cacagagggt atctgaatta
     2341 acacatggaa ataatgggaa gaggattccg acaaatagta caagagatcc catgttacta
     2401 tcacatattt actaaaattg caggatacaa gttatttcat aaacgtagtc caatgtatgg
     2461 ctctgccgat ataatcaatg tgtgtaacct tcactgcgaa cattgttact ggtggttaaa
     2521 cagaaaggag aatgaagagc ttacagtaga ccaatggaaa aaagtaatcg atgagaagtt
     2581 taagaaaaat aatgtatttg taatcactct tgtaggtggt gagcctacgt tgaggcctga
     2641 tgtgattgag ttgtttgtac aagagtttcc aaagcgaata tgcatagtat caaacggaac
     2701 cattccactc aagcgttacg aaaatcttta tttctattgg atatctattg atggaaatca
     2761 agaaatccat gacaagattc gtggtgaaaa tgcctgggat aggacaagaa agaatgttgt
     2821 cgattatgtg gaaaaaaatg gtgaccttgc atacaaagac atttggatta ctatgaccat
     2881 taatgcattg aactacaaga ctgtaaagaa agtgatggaa gattggtacg attattcaaa
     2941 taaaattgga tttcaatttc acactccttt tatgaaaaat gacccactat ggttaccatt
     3001 tggtgaagaa agaacgcgag tagttgagga gataaaaaaa atgaagaaaa aatatcctga
     3061 ttatatcata aacccagatg gccaactaga tgtaatgaag agaagttggg ggggaaaagg
     3121 caccactcca gttgattgcc ctacatgggc aatagtatct gtagatcata tgggaagaga
     3181 aaagagacca tgctgcatag gcagtgcgga aaataattcc atgaaaccta tttgtgaaga
     3241 ctgcggtctt ggttgttatt ctgtattgat accacacgga atcaaaggat aagatcctta
     3301 gatcaagttt gtagatgcac aagccttggt aatgctagtg agaacgaaat tattgccgcc
     3361 aatacaaaaa ttgtggtaaa tggaaattct ggaatcggtt cgggattatt tacggtagat
     3421 gtaaattctg aatctgcgaa gctattgtct tttag
//
LOCUS       DASPUS010000029         4628 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_977046, whole genome shotgun sequence.
ACCESSION   DASPUS010000029 DASPUS010000000
VERSION     DASPUS010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4628)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4628
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_977046"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..320
                     /locus_tag="VEJ68_00625"
     CDS             <1..320
                     /locus_tag="VEJ68_00625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HXX05306.1"
                     /translation="LKGKSDELIAEIVSKVSVNLNGASNAIALDANQEEIFNVKIDDT
                     IKNLRSTPSEIKYLILNGPVTKSLVNAAVEEGVEYLVCRQKNKMEGHGKLVIKTFREI
                     GLP"
     gene            571..1698
                     /locus_tag="VEJ68_00630"
     CDS             571..1698
                     /locus_tag="VEJ68_00630"
                     /inference="COORDINATES: protein motif:HMM:NF020700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig-like domain-containing protein"
                     /protein_id="HXX05307.1"
                     /translation="MGRMLCGITYLTISHVRFCRILLKLSLIAILVVVSAIITSNGAY
                     ENAFASGNSPKPSISITTPSNGATIQNGTLVVTGTASDSGSGIKFVQVKLNSGLPKTA
                     TPKAIGDWSTWTMSLDFSQSGANTITARAIDNAGNVQYIHITVTVNIVTKNSNMLFDF
                     LVRNQGIPDSSLAALYGKHSKPSDIITEFTKDLLSTTITVQVAGQKSTTYFSLADLQA
                     NAANLHNLGYTWIAYDLEGSYSPASEWNNPIASIQQASQIAHSNGLKLLISPAGISTN
                     DYASMAQYSDGWILQAMDLIAGDPTTMSNTIHDSVAKIKSGNPNEIIILQDSVNLDTV
                     DQMNNAWDLTKDVVNGITIFYSDSTQIPQMAQVLTHIDGIS"
     gene            1819..2748
                     /locus_tag="VEJ68_00635"
     CDS             1819..2748
                     /locus_tag="VEJ68_00635"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HXX05308.1"
                     /translation="MHVLVTGNTGFIGAKLCSDLAKKGFEVTALSRTQKDSQTISQDD
                     NTQNNKLVQCDILQETSLQETFKKIGKVDCVLHLAGQTFRKDLAYPQTYFQSNFIGTL
                     NMLECCRIFNIKKFVFSSSMAVYGLSTNQYTPQYLPVDEKHPVRPYDFYDISKYQAEQ
                     LCKFYSDRFGIKSVALRYSRVFGPQMVKGLIFQTVKKALANEPVEVFGDVSTDFVYID
                     DVINANIASIEKEFPDLEVFNIGSGEEITLHSICSTLIELCHSSSKIIFQPEPKSKFS
                     LDISKAKKMLEYQPTKVKEGLIECVDYIKNSIK"
     gene            2745..3899
                     /locus_tag="VEJ68_00640"
     CDS             2745..3899
                     /locus_tag="VEJ68_00640"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HXX05309.1"
                     /translation="MTSKSTPIKKIASATPFFDDEDIESISVDIKQILKSKKLVLGPY
                     TQKFEKLFSQYIGTKYGISVNSATAALEIVLSYCDVKDSEVIVPCNTFVACPNTVIYA
                     GGKPVFADMDPESFCMDIDDVKRKITPKTRVIMVVHLSGLPEPGMAELDKICKERGIL
                     LMEDCSHAHGAMYEGKKVGSLSLAGCFSFFATKILPTGTGGMITTDDEELEKFAEAFR
                     HQGGIGGEGRIEVFDKFGYDFMMNEVTAALGINQLTKLDKQLEKRRKVASQYYLQLEK
                     IKGIKCLPNTNPTNVYWKFITVLDKGIDRNKVRAIMREKYQIDAGILYPTLCHMQPVY
                     QKLGYVEGQCPVGEELIKRQLTLPVNPYMSEEDVNYVVESLDEVIHKEAL"
     gene            3931..>4628
                     /locus_tag="VEJ68_00645"
     CDS             3931..>4628
                     /locus_tag="VEJ68_00645"
                     /inference="COORDINATES: protein motif:HMM:NF020463.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WbqC family protein"
                     /protein_id="HXX05310.1"
                     /translation="MPWLGFFNKARLSDLLVIGDHVQYRNKGYQNRNKIKTTKGAQWL
                     TIPIVHNWGQAIKDVGINETEQNGVSWDELHLRTLQVNYGKAPFYDKYIGIFEKIYRR
                     RIKLLADNNLEFLKAIFEILGINVPIKKTSEMTLSKAKTELIVEICKTVGADAYISGM
                     GGSQYMEESLFEQNGLKLLFNNYEHPVYNQQFMNSGFLPNMSIIDLIFNHGPESLEIT
                     KSGFKGFELNSIRA"
BASE COUNT         1636 a          800 c          882 g         1310 t
ORIGIN      
        1 atctcaaagg taaatcagat gaattaatag ctgagattgt atctaaagta tcagtcaatc
       61 ttaatggcgc aagcaatgca attgcgctag atgcaaacca agaggaaatc tttaatgtaa
      121 aaatagatga tacaataaaa aaccttcgtt ccactccctc ggaaataaaa tacttgatct
      181 taaatggacc tgtaacaaaa tcgttggtaa atgcggcggt agaggaaggt gttgaatacc
      241 ttgtttgcag acaaaaaaat aaaatggaag gacacggtaa actagtcata aagactttca
      301 gagagatcgg tcttccttaa tttttgagta ttattaacaa ttacaattta attttgaccc
      361 ttatgttttc atgaaattta atattgatat tgcaatagat tgcacaaagt taatgcatga
      421 tgaaacttac aatttcaaat aagaatagtc taaaacaaca aatgaaaact aactagctaa
      481 caaataattt ttgattagta gaatttctac gcacaattaa ttagcaattt taaaaaacac
      541 gatatgtgaa ttataacaaa ttaatttcaa atgggtcgga tgttatgtgg aataacatac
      601 cttacaataa gtcatgtgag gttttgtaga attttgttga aactctctct tatcgcaata
      661 cttgtggtag tgtctgccat tattacatca aatggagcat atgagaatgc atttgcatcg
      721 ggaaattctc caaaaccttc tatttcgatt accactccat ctaatggtgc cactatccag
      781 aacggtacgt tagttgtgac aggaactgca tctgacagcg gcagtgggat aaaatttgta
      841 caggtgaaat taaattctgg attgccaaaa acggctacac ccaaggctat tggtgactgg
      901 tcaacatgga ctatgtctct tgatttttcg caatctgggg caaatacgat aactgctcgc
      961 gcaattgata atgcaggtaa cgtacaatac attcacatca cagtaacggt taacatcgtt
     1021 acaaaaaatt caaacatgtt atttgatttt cttgttcgaa atcaaggaat tccagattct
     1081 tcgcttgctg ctctctacgg taaacactca aaaccctcag atattatcac tgaatttaca
     1141 aaggaccttc tctcaacaac aatcacagtc caagtcgcag gacaaaaatc tacaacatat
     1201 ttttcactag cagatctcca ggcaaacgca gccaacttgc acaatcttgg atacacttgg
     1261 attgcatacg atttggaggg aagttattct ccagcaagtg aatggaataa tccaattgct
     1321 tcgatacaac aggcaagcca aattgctcac agtaacggcc taaaattgct gatatctccc
     1381 gcagggattt ctacaaatga ttatgcgagt atggcacaat actctgacgg ctggatatta
     1441 caggcaatgg atctgattgc aggtgatcca accacaatgt caaatacaat acatgatagt
     1501 gttgcaaaga taaaatcagg aaatccaaat gaaatcatta tactacaaga tagtgtaaac
     1561 cttgacacag tagatcaaat gaataacgcg tgggatttga caaaagatgt agtaaatgga
     1621 ataaccattt tctacagcga ttctacacaa attccacaaa tggctcaagt tttaacacat
     1681 atagacggaa ttagttaatc taacacttat tccaagtata tcttgttatt tcgatactat
     1741 tggtagacct acataagact agtttgtgat ggatttgtta aaaacatcgt ttatactctg
     1801 tattatttta gttattttat gcatgtacta gttaccggca atactggctt tatcggagcc
     1861 aaactttgca gtgacctggc caagaaggga tttgaggtta ccgcactatc gcgcactcaa
     1921 aaagactctc aaacaatctc acaagatgac aatacacaaa ataacaaact ggtacaatgc
     1981 gatattcttc aggaaacctc attacaagag acttttaaaa aaatcggtaa ggttgactgt
     2041 gttttacatc ttgctgggca gacatttagg aaggatctgg catatcctca gacctatttt
     2101 cagagtaatt ttattggcac tctaaatatg cttgaatgct gcagaatttt caatattaaa
     2161 aaatttgtat ttagttcaag catggcagtt tatggcctta gtacaaacca atacactcca
     2221 cagtacctgc ctgtagatga gaaacatcct gttagaccat acgattttta cgacattagc
     2281 aagtatcaag cagaacaact atgcaaattc tactctgacc ggtttggcat aaaaagcgta
     2341 gctctacgtt attctagggt ttttggtcca caaatggtaa aaggtctgat ttttcaaact
     2401 gtcaaaaaag cattagcaaa cgagcccgta gaggtctttg gcgatgtaag tacagatttt
     2461 gtttacattg atgatgtgat aaatgcaaat attgcttcga tagaaaagga atttccagat
     2521 ctggaagtgt tcaatattgg aagcggagaa gaaataactc tgcattcaat ttgttcaaca
     2581 ttaattgaat tgtgtcattc ttcttctaaa ataatatttc aacccgaacc aaaatcaaaa
     2641 ttctctcttg atatttccaa agctaaaaaa atgttagagt atcaaccaac caaagtaaaa
     2701 gaaggtttaa tagaatgtgt agattacatt aaaaattcta tcaaatgaca tcgaaatcta
     2761 cgccaataaa aaaaattgcc agtgctacac cattttttga tgacgaagac attgaaagta
     2821 tctccgtaga cattaagcaa attctcaaat caaagaaact ggtcttgggg ccatatacgc
     2881 aaaaatttga aaaacttttc agccaataca ttggaacaaa gtacggcata tcggtaaata
     2941 gcgctactgc tgcactggag attgttctat catattgtga tgttaaagat tctgaagtta
     3001 tcgttccatg taacacgttt gttgcttgtc ctaatactgt aatttatgca ggaggaaaac
     3061 cagtttttgc agatatggat ccagaaagtt tctgcatgga tatagacgat gtgaaaagaa
     3121 agataacgcc caagaccagg gtcattatgg ttgttcatct ttctggtctg ccagaacctg
     3181 gaatggctga gcttgacaaa atatgcaaag aaagaggaat actcctgatg gaagattgct
     3241 ctcatgcaca tggtgcaatg tatgaaggca agaaggtagg ttcattgagc ttggctggtt
     3301 gctttagctt ctttgctaca aagatacttc ctactggtac agggggcatg ataacaacag
     3361 atgacgaaga attagagaaa tttgcagaag cattcaggca tcagggcggt attggcggtg
     3421 aaggtaggat agaagtattt gacaagtttg gatacgattt catgatgaat gaggtcactg
     3481 ctgctttggg aataaatcaa ctgacaaaat tagataaaca gctagaaaag agacgaaagg
     3541 ttgcttccca gtactattta caattagaga aaattaaagg gataaaatgt ctaccaaaca
     3601 caaatcccac aaatgtatat tggaagttca taacagtcct tgacaaagga atagatcgaa
     3661 ataaggtcag ggcaataatg agggagaaat atcagattga tgcaggaata ctatatccaa
     3721 ctttgtgtca catgcaacca gtttatcaaa agttgggata tgtagaagga caatgtcctg
     3781 tgggcgaaga actcatcaaa cgtcaactaa ctcttcctgt aaatccatac atgagcgaag
     3841 aggatgttaa ttacgtagtg gagtcactgg acgaagttat acacaaagag gcattataac
     3901 atgataatta gcatacatca gccagacttt ttgccatggt tgggtttttt taacaaggca
     3961 agattgagtg atcttctggt cataggagat catgtacaat atagaaacaa aggatatcaa
     4021 aacagaaaca agataaagac tacaaaaggc gcacaatggc taaccatccc tattgtccac
     4081 aactgggggc aagcaataaa agatgtggga atcaatgaga cagaacaaaa tggagtaagc
     4141 tgggatgaat tgcatcttag gacattgcag gtaaattatg gcaaggctcc attctatgac
     4201 aaatacatag gaatatttga gaaaatttat cgaagaagaa tcaaacttct tgcagataat
     4261 aacttggaat tccttaaagc aatatttgaa attctgggaa ttaatgttcc aataaaaaaa
     4321 acttcagaga tgactctgag caaagcaaag acagaattga tagtggagat ctgcaaaacg
     4381 gttggagcag atgcatacat atctggaatg ggcggttccc aatacatgga agagagcctc
     4441 tttgaacaaa acggtctaaa acttttgttc aacaactacg agcaccctgt ttataatcaa
     4501 caatttatga actctggttt cctgccaaac atgtcaataa ttgatctgat attcaatcat
     4561 ggccctgaat ctcttgagat taccaaatca ggtttcaagg gttttgaatt aaattcaata
     4621 agggcaaa
//
LOCUS       DASPUS010000030         4129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1251157, whole genome shotgun sequence.
ACCESSION   DASPUS010000030 DASPUS010000000
VERSION     DASPUS010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4129)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4129
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1251157"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..659
                     /locus_tag="VEJ68_00650"
     CDS             <1..659
                     /locus_tag="VEJ68_00650"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HXX05311.1"
                     /translation="QVESLHSSGISNIVTSAEPKILKWADKLTTDSFFVKKTYKEKLD
                     IDIELLPSPIDETRFVELPEVPKVENQVAYVGRDSYEKGIDILKSIESKINGKVVYCT
                     NVPWKEAMTILKASEVLAVPSRMESMPWTIKEAFYLKVPVIATTVGDIPQIVENNVRG
                     ILVPPNDPISLLNAINSLLADKQLAKRLVDNAYDYYIANLTYDKVLPKYIQFYESLLK
                     "
     gene            complement(734..1468)
                     /locus_tag="VEJ68_00655"
     CDS             complement(734..1468)
                     /locus_tag="VEJ68_00655"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HXX05312.1"
                     /translation="MVEFDEQWKNFLEKEYLTYNKDQYEFNYKRVKEFLEITGIKPWY
                     KKDSYLKGKICLDAGCGPGRWTYAMQRLGANRVDSFDLSSEAVNRCKQINPNAYVFDL
                     WNLQPNSVYDFVLSWGVLHHTKDARKAFSKVVSQVKVGGMLHIMVYNKKNDWAYDGYR
                     GDTCIEKHKVWLQMTPEERLGLCKEKVRTMGGDIHGWFDAFNPEYNWSYTSDEVKNWF
                     EEEGFTNIKLRMIKQNINMNGIFHGK"
     gene            complement(1531..2439)
                     /locus_tag="VEJ68_00660"
     CDS             complement(1531..2439)
                     /locus_tag="VEJ68_00660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HXX05313.1"
                     /translation="MHFLVTGGAGFIGNHLAHHLLNKQHSVTIIDNLHSGKMENLDDI
                     KDKIIFHKIDILDYNKLKELVKNVDGIFHEAALTVVQESFDKPDEYNLVNVKGTENIF
                     KLANEFDKKVVYASSSSVYGNPVKIPVKEDAIRKPLNPYGETKLQDEYLAEGFSSKGT
                     KIIGLRYFNVYGKGQSISYAGVITKFLDRIRNHQPPIINGDGLQVRDFVYVEDVVNAN
                     LLAMESKIDSAFINIGSGKIISILELANMAIKAADLDMKPIHANPLQGDVKESQADIS
                     LAKRLIGWNPTVELKDWLKQVLSREK"
     gene            2579..3943
                     /locus_tag="VEJ68_00665"
     CDS             2579..3943
                     /locus_tag="VEJ68_00665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010193012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HXX05314.1"
                     /translation="MLEPNELSNYMKLGKIKVCVIGIGRIGLPTALSFARAGLHTTGV
                     DINTSLVQMVNSGEYPLKDEPDFDKIFDDVLKRKLFVATTEISDAVPKCNLIILSLPT
                     PMDKNNVPDYSALISVGRSLSKLLSKGSILVVESTIEPGFVENELISIIEGTEKRLKV
                     GVDLSIATCPETANPGQILHDFSVVPRLVGAIDNKTAKIVSEIYRHVFGAEILVMPDC
                     KTANAAKLTANVFRDINIAFVNELAILFENLGIDIMKVLEACDKKYNFETHYPGAGVG
                     GPCLPVNSYQILNSARGMENNGMLRIIRAARETNESMPYHVVELLVDALNEAGKSVKD
                     STIALLGVSYKPDVKDIQLAPVEAIIKRLDQLQAKVKIYDPYFKSTQVFSHKTEDNLI
                     DAISDVDATVIVTAHNEFKKIDPSLLAAKMRSRVIIDARGIIDINIAKKAGLIFRGIG
                     RGGL"
     gene            3930..>4129
                     /locus_tag="VEJ68_00670"
     CDS             3930..>4129
                     /locus_tag="VEJ68_00670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010193014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05315.1"
                     /translation="MEDYNHINPLSVESILTLRYDSTLKPLLQKLTWRDFVPSKSSNE
                     VDFIEKVITENIRKTIDTQTKRV"
BASE COUNT         1342 a          748 c          673 g         1366 t
ORIGIN      
        1 aacaagttga atctcttcac tcttctggaa taagcaacat tgtcacttca gcagaaccaa
       61 aaatattgaa atgggctgac aagttaacaa cggattcttt tttcgtaaaa aaaacataca
      121 aagaaaaact cgacatagac atagaattat tgccatctcc aatagatgag acacgttttg
      181 tcgaattacc tgaagttcct aaagtagaaa atcaggttgc ttatgtggga agagacagtt
      241 atgagaaagg catcgatatc ttgaaaagta ttgaatcaaa aattaatgga aaggtagtct
      301 attgtacaaa cgtaccttgg aaggaagcaa tgaccatatt gaaagcatca gaagtattag
      361 cagttccatc aagaatggaa agcatgcctt ggacaattaa agaagcattt tatctcaagg
      421 tacctgttat agctacaaca gtaggagata ttccccaaat agtggaaaac aatgttaggg
      481 gaattctagt tccaccaaat gatccaattt cactcttaaa tgcaataaat tcacttcttg
      541 ctgataaaca acttgctaaa agactagtag ataatgcata tgattattac attgctaatt
      601 taacttacga caaagtattg ccaaaatata tccagtttta tgagagcttg ttaaaatgat
      661 ctttaatttc ttacggttct attgaatcat tttcgattca atctttctct tacttatttt
      721 atttgtaatg atgttatttt ccatggaaaa ttccattcat attgatattt tgttttatca
      781 ttctaagctt aatgtttgta aatccctctt cctcgaacca atttttgact tcatctgagg
      841 tgtaactcca attatattct ggattgaatg catcaaacca accgtggata tcaccgccca
      901 tcgttctaac cttctcctta cataacccca atctttcttc aggagtcatt tgtaaccata
      961 ccttgtgttt ctctatacaa gtatcacctc tgtatccatc atatgcccaa tcattttttt
     1021 tattgtatac cattatgtgt agcatgcctc ctaccttgac ttgagaaaca acctttgaga
     1081 atgcttttct tgcatctttt gtatgatgta atacacccca agacaacaca aaatcataaa
     1141 cggaatttgg ttgtaaattc caaagatcaa aaacataagc gttcgggttt atctgtttac
     1201 atctatttac cgcttcagaa ctaagatcaa aactatctac tctatttgcg cccaatcttt
     1261 gcattgcata agtccatctc cctggaccgc atccggcatc caaacatatt tttcctttca
     1321 aataagaatc ttttttgtac catggtttta ttcctgtaat ttctaaaaat tctttaactc
     1381 ttttatagtt aaactcgtat tggtctttgt tgtatgttaa atactctttt tccaaaaagt
     1441 ttttccattg ttcgtcaaat tcaaccatgt cattttgatc taaaggtttc ataaaaagtg
     1501 tggtataaaa caacttgaag aatttttatt ctatttttct ctagataata cctgttttag
     1561 ccaatccttc agttcaactg tagggttcca tcctatcagt ctttttgcca agctaatatc
     1621 tgcttgactt tcttttacat cgccttgcaa aggatttgca tgaataggct tcatatcaag
     1681 atctgctgct tttatggcca tgtttgcaag ttcaagaata gaaattattt ttccacttcc
     1741 tatgttgata aaagcagaat caattttact ttccattgca agaaggttcg catttacaac
     1801 atcttctaca taaacaaaat ctcttacctg taaaccatct ccattaatta tagggggttg
     1861 atgatttcgt atcctgtcga gaaattttgt tataacgcca gcatatgata ttgattggcc
     1921 tttaccgtag acattgaaat atctaagacc gattatttta gtaccttttg aactaaaccc
     1981 ttccgctaaa tattcgtctt gaagcttggt ttctccatac ggattgaggg gttttcttat
     2041 agcatcctcc ttaactggta ttttgactgg atttccgtac acgctagaac tactagcata
     2101 tacaactttt ttatcaaact cattcgcaag tttaaagatg ttttcagtgc cttttacatt
     2161 tacaagatta tattcatctg gcttgtcaaa tgattcttga accacagtta gcgccgcttc
     2221 atggaaaatt ccatccacat tcttaactaa ttcttttaat ttattgtagt ccaaaatatc
     2281 tattttatga aaaataattt tatcttttat atcatccaaa ttttccatct taccgctatg
     2341 aagattatct attattgtta cagagtgttg tttgtttagt aagtgatgtg ctaaatggtt
     2401 tccaataaaa ccagctccac cagtcacaag aaaatgcata tccaatacct aattgatgta
     2461 ctctttaagc cttgggaaga aggtgtgatg caaatttata taaacttagt aaagtcatcc
     2521 atctcaagta gttgacaaaa aattgatatc atcaaaagac atccctgaca atctgattat
     2581 gttagaaccc aatgaattaa gtaactatat gaaattggga aagataaaag tatgtgtcat
     2641 aggaattgga agaatagggc ttcctaccgc attgtctttt gctcgtgctg gtcttcacac
     2701 cactggcgtt gatattaaca catccttggt ccagatggtg aactctggag agtatccact
     2761 caaagatgaa cctgattttg ataaaatatt tgacgatgtg ttgaaaagaa agttgtttgt
     2821 ggcaacaact gagatctctg atgcagtacc aaaatgcaat ctcataatac tctctcttcc
     2881 aactccaatg gataaaaaca atgtaccaga ttattccgct ttaatttctg tagggaggag
     2941 tttaagcaaa ttactaagta aaggatctat actagttgta gaaagtacta tagaaccagg
     3001 ttttgttgaa aatgaattga tttcaattat tgaaggaact gaaaaacgat tgaaagttgg
     3061 tgtagatctg agtatcgcca catgcccaga aacagcaaat cctggacaaa ttcttcatga
     3121 ctttagtgtc gtaccacgat tagtgggggc gattgataac aaaactgcaa aaatagtatc
     3181 ggaaatatat cgacacgttt ttggtgcaga aattttagtg atgcctgatt gcaaaactgc
     3241 taacgctgca aaacttacag cgaacgtttt tcgggacata aacatagctt ttgttaatga
     3301 gcttgcgatt ctatttgaaa accttggaat agatataatg aaagtccttg aagcatgtga
     3361 taaaaaatac aattttgaaa ctcattatcc tggtgcagga gttggaggac catgcttgcc
     3421 cgttaattct tatcaaattc ttaattcagc caggggtatg gaaaataatg gaatgctaag
     3481 gataattcgt gctgcccgag agaccaatga atctatgcca tatcatgttg tagaattact
     3541 agtagatgcc ctcaacgagg ctggcaagtc tgtgaaggat agtacaattg cgttacttgg
     3601 agtatcctac aaaccagatg tcaaagatat tcaactggcc ccagtagagg cgataataaa
     3661 aagacttgat cagctacaag ctaaagtgaa gatttatgat ccatatttca aatcaactca
     3721 agtattttct cataagactg aagataacct catagatgcc atttccgatg ttgatgcaac
     3781 agttatagta accgcacata atgaattcaa aaagattgat ccttcattac ttgcagctaa
     3841 gatgagatct cgtgtaatta tcgatgctcg tggtataatt gatattaata ttgcaaagaa
     3901 agcaggtttg atttttagag gcatagggcg tggaggatta taaccacata aaccctctct
     3961 cagttgaaag tattcttact cttagatatg attctacttt aaaaccatta ttacaaaaat
     4021 taacatggag agattttgtt ccatcaaaat cctctaacga agtcgatttt attgaaaaag
     4081 taattacaga gaatatcagg aaaacaattg atacccaaac aaaacgagt
//
LOCUS       DASPUS010000031         5752 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_839857, whole genome shotgun sequence.
ACCESSION   DASPUS010000031 DASPUS010000000
VERSION     DASPUS010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5752)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5752
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_839857"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1283
                     /locus_tag="VEJ68_00675"
     CDS             <1..1283
                     /locus_tag="VEJ68_00675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033179 - proton-transporting V-type
                     ATPase, V0 domain [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0046961 - proton-transporting ATPase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="V-type ATPase 116kDa subunit family protein"
                     /protein_id="HXX05316.1"
                     /translation="SKTHYVNIVCLEEQLEIENRKLEIVDNLGVTSDSFALEGWIPKS
                     KVNQLKTGFDQHAKGTLLFELETDENPPTLFNNPKRFRLFEAFIRFYSLPSGKEFDPT
                     LIFGLIFPVFYGMMVGDAGYGLVILLVCRWVIRRVEGGKKNFNIMPTPLRKFALTILK
                     PRQMVKLAKAMTPGAIIAIILGFLFNLYFGFHPNIYLFSYLNHTFGLHLPADGAFFDP
                     ITGLRKLLLISGYIGLGMVTFGLILGILNTLREGEKKHAIGKVGWLLFGWGVVLTGLA
                     LLHHQHINPVHHVAGIGYVGLMLAGIGLMFYGEGVRAIMELPSIVSHILSYTRITGIL
                     LASVILADVIDFIFIKTLHHSIPFVILGTIIIFIGHIFNIIIGVFEPGIQGARLVYVE
                     FFSKFFHGNGRPFRPFGSTRKYTYDQYELESKEK"
     gene            complement(1285..1746)
                     /gene="pyrI"
                     /locus_tag="VEJ68_00680"
     CDS             complement(1285..1746)
                     /gene="pyrI"
                     /locus_tag="VEJ68_00680"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012216069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HXX05317.1"
                     /translation="MSESDLIVRKIKNGTVIDHIESGKGLKVLNALGIDGKDGNVITI
                     ALNVPSSKVAKKDIIKVENRFLEDSDTNKLALIAPKATVNIIKEYKLVEKRRVTLPNE
                     IERIFKCSNPDCISNSDEDIEPIMDVVDKTGLVLRCRFCTRILDVNELKYY"
     gene            1789..2721
                     /gene="pyrB"
                     /locus_tag="VEJ68_00685"
     CDS             1789..2721
                     /gene="pyrB"
                     /locus_tag="VEJ68_00685"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010189541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HXX05318.1"
                     /translation="MSNTFFQKDIVSVRDFDKQKFEEVFQATDKIIGMNPNERRELAR
                     GKTLGYLFFEPSTRTRLSFEAAMASIGGLSLGIADASSSSTRKGESLADTVRMMSLYS
                     DVVVLRHQLDGSSRFAAEMSEKPLINAGSGTEEHPTQAILDLYTIRKEKKRIDGLKIG
                     IVGDLKYGRTVYSLLYALSNYKIDVKLISPPALKIRSDSTYEIRKRLTYTETTDLEEN
                     LGDLDVVYVTRIQKERFADVEEYVKVKGSYKIGLDILKKMKEDVIIMHPLPRLDEISP
                     ELDSTNQAKYFKQAQYGKDTRAALLALILNEKGI"
     gene            complement(2727..3926)
                     /locus_tag="VEJ68_00690"
     CDS             complement(2727..3926)
                     /locus_tag="VEJ68_00690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05319.1"
                     /translation="MKNIFNISIKSFFIIPVVVLFTVMFHYASAEVLVHSNEFAGYFD
                     SDGFYTVFGSVRNMGNQPVLAKIQVTVKSGNNTFSENNILPVIYPSKDMPFKFKFPQI
                     TIGNPILESPKISYILTNSEPLNLEVNYDTTLQRHPDGHLTGFITNTGNDTRYNVNVY
                     ALVHNKNNEFLDEVQSIQSIPKINPGDKAEFIMYPDPTIAKQVTYYSCFIPGTDNSIE
                     LWTQMRDKKFYFSVLSIVYFTNQKFNENDNSISIDAGNPWQIPYYANFMFPRGSSNGD
                     FKVFIDNKQIVPLISIDNDTNNWHVAFNIDYGQHNVLISGFDPNYVPISDEYYYLDSK
                     LALTAWAGYSTFTISDSKLLSVLGIKGEYVPAWVKNTVNFMIYNNLSADDIVNEIKYL
                     KQIEVVR"
     gene            complement(3937..4320)
                     /locus_tag="VEJ68_00695"
     CDS             complement(3937..4320)
                     /locus_tag="VEJ68_00695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008298576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family ribbon-helix-helix protein"
                     /protein_id="HXX05320.1"
                     /translation="MPIVSISLNDDILSEIDKMQKSMGFSGRSEIIRAGIRNLISEEK
                     QRANLSGNIHAILMVVHDEESEQIVTGVKHNHEELIGTHLHSKVAGNKCMELFLLHGD
                     AEKISLMTKDFKTNRKMDNVKLLAM"
     gene            4411..5385
                     /locus_tag="VEJ68_00700"
     CDS             4411..5385
                     /locus_tag="VEJ68_00700"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HXX05321.1"
                     /translation="MKSNQKITIVGGIVAVIITAAVIMSSNNIYQQHTANTTSSQKMK
                     VIASFFPMYEFTKNVVGDRADVSVFIPIGEEPHGWEPPTQQIQEIQNSQLFIYNGAGM
                     EAFIPAFLSTGNFPNTTFVRASQGIQMQDADAAHMDPDEAKPVIEQGGKDPHVWNDPI
                     LAQQEVRNIADAMEKADPGNAQYYENNVNAYNEKLTKLDQDIKSGLSNCKLHTFVSFH
                     NAFNYFSQRYNLTDVWVSGLAPESEVSPQDLARVENIAKQNNVKIIFSEDLVDPKLAQ
                     SLATDIGATTRVLSPLEGINETEQKEGITFIDKWYQNLDNLKAALECQ"
     gene            5382..>5752
                     /locus_tag="VEJ68_00705"
     CDS             5382..>5752
                     /locus_tag="VEJ68_00705"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HXX05322.1"
                     /translation="MNVLDIEKVSVSHNGALAINNISFSVREGDLLGVVGPNGAGKTT
                     LFRAILGLNSYQGKIKLFGYEGHEYNMLLPMIGYVPQKVNFEPNFPATVFDVVALGIL
                     PEKKLREGAKLIQSRGCSWNRV"
BASE COUNT         1898 a          965 c         1041 g         1848 t
ORIGIN      
        1 tctcaaaaac tcattatgta aatattgttt gcctagaaga acagttggaa attgaaaaca
       61 gaaagttaga gattgtggac aaccttggtg ttacctcaga ctcgtttgca ttggaaggat
      121 ggattccaaa atcaaaggtg aatcagctta agaccggatt tgatcagcat gcaaagggaa
      181 ccttgttgtt tgagctggaa acagatgaaa atcctccaac gctatttaat aatccgaaaa
      241 gatttaggct atttgaagca ttcatcaggt tttattcatt gccttctgga aaagaatttg
      301 atcctacctt aatttttggt ttgatctttc cagtctttta tgggatgatg gtgggagatg
      361 cagggtatgg tcttgttata ctgcttgttt gcaggtgggt tattcgaaga gtagaaggag
      421 gtaagaaaaa ctttaacatc atgccaacac cactgcgtaa atttgcgtta accatactaa
      481 aaccaagaca gatggtaaag cttgcaaaag ccatgacacc tggtgcaatc attgcaatca
      541 tcttaggatt cttattcaac ctgtactttg gttttcatcc caacatctac ctattcagct
      601 atcttaacca tacctttggt ttacacttac ctgcagatgg agcattcttt gacccaatta
      661 ctggtttgag aaaactacta ctgatttctg gatacattgg tcttggaatg gtgacatttg
      721 gcctaatctt aggcatactt aatactctaa gagagggtga aaagaaacat gctataggca
      781 aagttggctg gttactcttt ggatggggtg ttgtactaac aggattagca ctattacatc
      841 atcaacacat caaccctgta catcatgttg caggaatagg atatgttggc cttatgcttg
      901 caggaatagg tctgatgttt tatggtgagg gcgttcgagc aataatggaa ttgccatcaa
      961 tagttagtca cattctttct tacacaagaa ttactggtat attgcttgca tctgtaattc
     1021 ttgcagatgt cattgacttt atcttcataa agacattaca ccactcaata ccattcgtaa
     1081 tacttggaac cattatcatc ttcatagggc acatattcaa cataataatt ggagtctttg
     1141 aacctggtat acagggagct aggttagttt atgttgaatt cttttcaaaa ttcttccacg
     1201 gtaacggcag accatttaga ccatttggtt caactagaaa atacacttat gaccagtacg
     1261 aactagaatc aaaagaaaaa tagtttagta gtattttaat tcgttaacat ctaaaatcct
     1321 agtgcagaat ctacatcgta ggacaagtcc tgttttatcc acaacatcca ttattggttc
     1381 aatatcctca tcgctgttag aaatacaatc aggatttgaa catttgaaaa tacgttctat
     1441 ctcatttggt aatgttacgc gtcgtttttc aaccaatttg tattctttga taatgtttac
     1501 ggttgcttta ggtgcgatta gagcaagctt gtttgtatct gaatcttcta ggaatctatt
     1561 ttctactttg atgatgtcct tttttgcaac ctttgagctt ggaacgttca atgctattgt
     1621 aattacattt ccatcttttc catcgatgcc caaggcattg agaactttga gtccttttcc
     1681 tgactcgata tgatcaatga ctgtaccatt tttgattttt ctaacgatta agtcagactc
     1741 ggacattgga atagtttttg tactactcat atataacagt gaactacgat gagcaatact
     1801 tttttccaaa aagatattgt ctcggtacgt gattttgata aacaaaagtt tgaggaagtt
     1861 tttcaagcta ccgataaaat aataggaatg aatccaaatg agagacgcga acttgctcga
     1921 ggaaaaacac ttggttatct cttcttcgaa cccagtacca gaactcgatt aagctttgaa
     1981 gctgcaatgg cctctattgg aggcctatct cttggaatag ctgatgcatc atcatcttca
     2041 acaagaaagg gtgaaagttt agctgataca gttagaatga tgtcattata ttcagatgtt
     2101 gttgtattac gccatcaact ggatgggtca agtagattcg ctgctgaaat gtctgagaaa
     2161 cccctgatca atgctggcag tggaacagaa gaacacccta ctcaagctat tctagacctt
     2221 tatacgataa gaaaggaaaa gaaacgaatc gatggtctaa aaataggaat tgttggtgat
     2281 ctaaaatatg gaagaacagt atattcactt ttgtacgctt tgagcaatta caagatagat
     2341 gtaaaactaa tttctccccc agctctgaaa atccgctcag attctacgta tgagataaga
     2401 aaacgtctaa catatacaga aactactgat cttgaggaga atctgggaga tttggatgtg
     2461 gtttatgtaa ctagaattca aaaggaaaga tttgctgacg ttgaagaata tgtgaaagta
     2521 aagggtagtt ataagatcgg tttggatata ttaaagaaaa tgaaagagga tgtcatcatt
     2581 atgcatcctc ttcctagatt ggatgaaatt tcaccagaac ttgattctac aaatcaagca
     2641 aaatacttca agcaagctca atatggtaaa gatactcgag ctgcattact tgcattaatt
     2701 ctaaacgaaa aaggaattta gctaacttat cttactactt caatctgttt caaatattta
     2761 atttcattta caatatcatc tgctgaaaga ttattgtata tcatgaagtt aacagtattt
     2821 ttaacccatg ctggaacata ttctccttta attcccagta cagacaacaa ctttgaatct
     2881 gatattgtaa atgttgaata accggcccat gcagttaatg ctaattttga atcaagataa
     2941 tagtattcat ctgagattgg cacataattt ggatcaaaac ctgagattag gacattatgt
     3001 tgtccataat caatattgaa ggcaacatgc caattgtttg tatcgttatc tatactgatt
     3061 aatggaacaa tctgtttgtt gtcaatgaat actttgaaat cgccattact agatcctcta
     3121 ggaaacataa aatttgcgta atatggaatt tgccaaggat ttccagcatc aatggaaatt
     3181 gaattatcgt tttcattgaa tttttgattg gtaaaataca cgattgagag tacgctaaaa
     3241 tagaattttt tgtctctcat ttgggtccat aattctattg aattatcagt acctggaatg
     3301 aaacaactat agtaagttac ttgttttgct atcgtaggat caggatacat tataaattct
     3361 gccttgtctc caggattaat ttttggtatt gactggatgc tttgtacctc gtcaagaaat
     3421 tcattattct tattgtgcac taatgcatag acatttacat tataacgagt atcattccca
     3481 gtatttgtta tgaatccagt aagatggccg tctggatgtc tctgtaaagt cgtatcataa
     3541 tttacttcta aattcaaggg ttcgctatta gttaaaatat atgaaatttt ggggctctca
     3601 agaattgggt taccgattgt aatctgtgga aacttgaatt taaaaggcat atcttttgag
     3661 ggataaataa caggtagaat attgttttca gaaaatgtgt tattacctga tttcacggtg
     3721 acttgaatct tggcaaggac aggttgattt cccatatttc taacagaacc aaatactgtg
     3781 taaaagccat cagaatcaaa atagcctgca aattcattac tatgaaccaa aacttccgcg
     3841 cttgcataat gaaacatgac agtaaataat acaacaactg gtatgatgaa aaaagatttt
     3901 atgctaatgt tgaaaatatt tttcactcaa tttcatctac attgcaagaa gttttacgtt
     3961 atccatcttt ctattagttt tgaaatcttt agtcataaga ctaatctttt ctgcatcacc
     4021 atgtaacagg aagagctcca tgcatttgtt tcctgcaact ttactatgaa gatgtgtacc
     4081 aatcaattct tcatgattgt gttttacacc agtaacaatc tgttctgatt cttcatcatg
     4141 aactaccatc aaaattgcat gaatattacc agaaagattt gctctttgtt tttcttctga
     4201 tattaaattt ctaattcccg cacgaatgat ttctgatctg cccgaaaacc ccatactttt
     4261 ctgcattttg tcaatttctg ataatatgtc atcatttagt gaaattgaaa caattggcac
     4321 gagtttacta ttattaactt tcttataagt ttagcaataa aaattattaa aaatttcaag
     4381 atttattaat aacattaggc atgtaagagc gtgaaatcta accagaaaat tacaatagtt
     4441 ggtggaatcg tagctgtgat tattacagct gctgttatta tgtcaagcaa taatatctac
     4501 caacaacata ctgcaaatac aacatctagt caaaaaatga aagtaattgc atcgtttttt
     4561 ccaatgtacg agtttacaaa aaatgtcgtt ggtgacagag cagatgtcag tgtgtttatt
     4621 ccaattggtg aggaaccaca tggatgggag ccacctactc aacaaataca ggagattcaa
     4681 aactctcaac tcttcatcta taacggcgct ggtatggaag catttattcc tgcattttta
     4741 tcaacaggaa attttccaaa tactacattt gtccgtgctt cacaaggaat ccaaatgcaa
     4801 gatgcagatg ctgcacatat ggatccagat gaagccaagc cagtcataga acagggagga
     4861 aaagatcctc atgtctggaa tgatcctata cttgcacagc aagaggtacg aaatattgca
     4921 gatgcgatgg agaaagctga tcctgggaat gctcagtatt atgaaaacaa tgtgaatgca
     4981 tacaatgaaa agcttaccaa attagatcaa gatatcaaat caggattatc aaattgtaag
     5041 ttgcatacat ttgtatcatt tcataatgca tttaattact tttcacagag atacaattta
     5101 accgatgttt gggtatctgg attagctcct gaatctgaag tatcaccaca agatctcgca
     5161 cgagtagaaa atattgctaa acaaaataat gtaaaaatta tcttttctga agatcttgta
     5221 gatcctaaac ttgctcaaag cctagcaact gatattggtg ccacaacaag agtgctgagt
     5281 cctcttgaag gtataaacga gactgaacaa aaagaaggaa ttacattcat agacaaatgg
     5341 tatcaaaacc tagataatct taaagctgca ctagaatgtc aatgaatgta cttgatatag
     5401 aaaaagtttc tgtaagtcat aacggagctt tagcaataaa taacataagt tttagcgttc
     5461 gagaaggaga tcttttagga gtagtagggc ctaatggtgc aggtaaaacc acattattta
     5521 gagcaattct aggattaaat agctatcagg gaaaaatcaa attatttgga tatgaaggac
     5581 atgaatacaa tatgttactt cctatgatag gatatgttcc acaaaaagta aattttgaac
     5641 caaattttcc tgcaacagta tttgatgtag tagcactagg aatactaccg gaaaaaaaat
     5701 taagagaagg tgcaaagttg atacaaagtc gtggatgttc ttggaacaga gt
//
LOCUS       DASPUS010000032         3983 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_840091, whole genome shotgun sequence.
ACCESSION   DASPUS010000032 DASPUS010000000
VERSION     DASPUS010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3983)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3983
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_840091"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..421
                     /locus_tag="VEJ68_00710"
     CDS             <1..421
                     /locus_tag="VEJ68_00710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HXX05323.1"
                     /translation="AYEIKIQYLLADFENLKKRTELDVQNKVNAITDNIVLKFLSIYD
                     DFVRAQEALSKQKANTEGLDGILKNMNAFLSELGVKPIDALGEIFDPKLHEAISVKES
                     SDLDDNTITSELRKGYILKDRVIRPTLVEISKKRDRE"
     gene            430..2295
                     /gene="dnaK"
                     /locus_tag="VEJ68_00715"
     CDS             430..2295
                     /gene="dnaK"
                     /locus_tag="VEJ68_00715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HXX05324.1"
                     /translation="MAKIIGIDLGTSNSAAAVMMGGKPTLIPAAEGTTVGGKAFPSVV
                     ALTKDEQLIVGEPARRQAVTNPEGTVVAAKRKMGTDFVFKMYGKEYKPQQISAFILQK
                     IKRDAEAFIGEKIEKAVITVPAYFNDNQRQATKDAGQIAGLEVVRIINEPTAAALAFG
                     LDKSKQDMKIMVFDFGGGTLDVTIMEMGGGVFEVMSTSGDTQLGGTDMDKVLIDYITD
                     NFRKTSGVDLSKDNAAMVRVREAAEKAKIELSSLFETDVNLPFVAYDTSGPKNLELKI
                     TRAKLEELINPIVERCRTSMTKSLEDAKLSTSDVSKIILVGGPTRIPLVRKFVANVMG
                     KEPEAGVDPMEAVALGAAIQAGIIAGEVTSDIVLLDVTPLTLGVEVLGGLREPIIERN
                     TTIPTSKSKTFTTAADNQTAVTIHIVQGERPMAVDNVSLGSFNLSGIPPAPRGIPQIE
                     VKFDIDANGILNVTAKDLATQKEAKITISASTKLSKDDISKMQKDAETFAEQDRMKKE
                     QVEIKNEAEQYIYATEKLINQDLKDKVSQDQGIKVSNAIKELKDVLDKGPAEIKPKLD
                     ALKKIVNDISTELYKNVAPPPGAGQQQGAGQQQEAGPQQGAEEGASGQSAGGTAN"
     gene            2331..3434
                     /gene="dnaJ"
                     /locus_tag="VEJ68_00720"
     CDS             2331..3434
                     /gene="dnaJ"
                     /locus_tag="VEJ68_00720"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HXX05325.1"
                     /translation="MSAKRDYYEVLGIQKNASQDEIKSQYRKLALKFHPDRNKSPDAA
                     EHFKEISEAYAVLSDQEKRKLYDTHGHAGVDGRYSTEDIFQGSRVNFEDIFGSGFESI
                     FENVFGRGGNFRFGGFDFGFGRERGADLVYDATITLEDVLRGKREEVDLPRELDCDNC
                     KGTGASPGTSMRTCSVCNGHGQVRTSRSSGFSTFVTVQPCSTCRGQGKIIERPCSKCK
                     GTGKQKGIRHFSFEIPPGVESGEYHIRGEGETVPNGTSGDLIVRISVKPHDKFKRDGA
                     DIFYDATISMIDASLGKKLIVPTLDGTEKIDVEAGSQPNTIIKLKGKGLPHQGVRGRG
                     DEYVRLVVNIPKKLDKNQRKLLEELGDSLGQDE"
     gene            3427..>3983
                     /locus_tag="VEJ68_00725"
     CDS             3427..>3983
                     /locus_tag="VEJ68_00725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008296833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05326.1"
                     /translation="MNKKLKIALDVDGVLADVIHAWLSYNNTFRTIISKSDISEWDFW
                     KKYNINKFDFYEELSKCWKSWETIPPTERDISYASRELSKIGSVDIVTARDDSTHDAV
                     KNWLKMHNVIFKNYVGVIEGTEKAKLDYDVFIDDSPINAEHMLARGKSVIIYEQPWNF
                     GFYDDRAKRIKELKNAVRIIKESIIA"
BASE COUNT         1434 a          648 c          869 g         1032 t
ORIGIN      
        1 agcatatgaa ataaaaattc aatatctgtt ggcagatttt gaaaatttaa agaaaagaac
       61 tgaacttgat gtacaaaata aggtaaatgc aattactgat aatatcgtcc tgaaattcct
      121 ttcaatttat gatgattttg tgcgtgcgca ggaagcattg tcaaaacaaa aagccaatac
      181 tgaaggcctc gatggtattt taaaaaatat gaatgccttt ctctcagagt tgggagttaa
      241 acccattgat gcactgggtg agatctttga tccaaaatta cacgaagcta tttcagtaaa
      301 agaatcttca gatcttgatg ataacacaat cacctcagaa cttcgtaagg gatatatttt
      361 aaaggacaga gttattagac ctaccttagt agaaatatca aagaaacgtg atagggagta
      421 gaatagaaat tggctaaaat tatcggaatt gatttaggaa ctagtaactc tgctgctgca
      481 gttatgatgg gaggaaaacc aactctaatc ccagcagctg aagggactac agtgggaggt
      541 aaggcttttc cttctgtggt agccttaaca aaggatgaac aactcattgt aggagaacct
      601 gcacgaagac aagcagtaac aaatccagag ggtacggtag ttgctgcaaa gagaaaaatg
      661 ggaacagatt ttgtgtttaa gatgtacgga aaggaataca aacctcaaca aatttcggcc
      721 tttattttac aaaagataaa acgtgatgca gaggccttta ttggtgaaaa aatagaaaaa
      781 gcagtaatta cagtaccagc ttattttaat gataatcaga gacaggcaac taaagatgct
      841 ggacaaatag caggacttga agttgttaga ataattaatg aaccaactgc agctgctctt
      901 gcatttggtc ttgacaaatc aaaacaagat atgaaaatta tggtctttga ttttggtgga
      961 ggaactctag atgttacaat aatggaaatg ggtggaggtg tctttgaagt aatgagtaca
     1021 tctggtgata cgcaattggg tgggactgat atggataagg tcctaatcga ctatattact
     1081 gacaatttta gaaaaacgtc tggtgttgat ctttcaaaag ataacgctgc aatggttagg
     1141 gtaagagaag cagcagaaaa agcaaagata gaactttctt ctttatttga aacggatgtc
     1201 aaccttccgt ttgtagcgta tgatacctcc ggacccaaaa atttggagct taagataact
     1261 agggcaaagc ttgaggaact cattaatcca attgttgaaa gatgcaggac ctcgatgaca
     1321 aagtcattag aagatgcaaa attatctacc tctgatgtaa gtaagatcat tcttgttggt
     1381 ggaccgacaa ggattcccct tgtaagaaaa tttgtagcta atgtaatggg taaagagcct
     1441 gaagcaggcg tagatcccat ggaagccgta gcactaggag ctgctataca agcaggaata
     1501 attgcaggtg aagtaacaag cgatatagta cttttagatg tcactccatt aactcttggt
     1561 gtcgaggttc ttggagggct acgagaacca atcattgaac gaaataccac tattccaaca
     1621 tccaagagta aaacattcac aaccgcagca gataaccaaa ctgctgtaac tatccacata
     1681 gtgcaaggag aaaggcctat ggcagtagac aatgtctcgc ttggaagttt caatttatct
     1741 ggtatacctc cagcaccgag aggcatacca caaattgaag tgaaatttga tattgatgca
     1801 aatggaattc taaatgttac agcaaaggac cttgcaactc aaaaagaagc caagattaca
     1861 attagcgcaa gtacaaaact ctcaaaagat gatatttcaa aaatgcaaaa ggatgctgaa
     1921 acctttgcag aacaagatag aatgaagaaa gaacaagttg aaataaaaaa tgaagctgaa
     1981 caatacatct atgctactga aaaactaata aatcaagatc taaaggacaa ggtatctcaa
     2041 gatcagggaa taaaggtaag caacgcaata aaggaactta aagacgtcct tgacaaaggc
     2101 cctgctgaga taaaaccaaa acttgatgca ttaaagaaga ttgtaaatga catcagtact
     2161 gaactttaca aaaacgtagc tccaccgccg ggagccggac aacaacaagg agctggacaa
     2221 caacaagaag ctggaccgca gcaaggagca gaagaagggg cctcgggtca atctgctggt
     2281 ggaacggcta actgatgttt atatcaggta ataaataata attcaaaatt atgagcgcaa
     2341 agcgtgacta ttatgaagtc ttggggatac aaaaaaatgc ctctcaagat gaaataaaat
     2401 ctcaataccg caaactagct ctcaagtttc atccagatcg caacaagtca cctgatgcag
     2461 ctgaacattt caaagagata tcagaagctt atgcagtact ttctgatcaa gaaaaaagaa
     2521 agctctacga tactcatggt catgcaggag tcgatggcag gtacagtaca gaagatatat
     2581 ttcaaggatc tagggtcaat tttgaagata ttttcggttc tgggtttgaa tctatctttg
     2641 aaaatgtttt tggccgggga ggcaatttta gatttggggg gtttgacttt ggatttggca
     2701 gagaaagagg agcagactta gtttatgatg cgaccataac actagaagat gtgcttagag
     2761 gcaaacgcga agaggttgac ttgcctaggg aactcgattg tgataattgc aaaggcacag
     2821 gtgcttcccc cggaacatcg atgcggacct gttctgtttg taatgggcat ggtcaggtac
     2881 gaacatctcg tagcagcggt ttttccacct ttgttacagt tcaaccttgt agtacatgca
     2941 gaggacaagg caaaataatt gaaaggccgt gttctaagtg caaaggcact ggcaaacaaa
     3001 aaggaatacg acacttttca tttgaaattc ctccgggagt agaaagcgga gaatatcata
     3061 ttagaggtga gggtgaaaca gtgccaaatg gaacaagcgg tgatttgatt gttcgaatta
     3121 gtgtgaaacc ccatgataaa ttcaaaagag atggtgctga catattttat gatgcaacta
     3181 tttccatgat tgatgcgtca ctaggcaaaa aattgattgt accaacatta gatggaactg
     3241 aaaaaattga tgttgaagca ggaagtcagc caaatacaat aataaaacta aaaggaaaag
     3301 gtcttcctca tcaaggggtt aggggacgcg gagatgaata tgtcagactt gtggtaaata
     3361 ttcctaagaa gcttgataaa aatcaacgta aattacttga agagcttgga gattcgctag
     3421 gacaagatga ataaaaaatt aaagattgca ctcgatgttg atggagttct ggcagatgtc
     3481 atacatgctt ggttatcata caataacacg tttagaacaa tcatatctaa atcagacata
     3541 tcagaatggg atttttggaa aaaatacaac ataaataaat ttgattttta cgaagaactc
     3601 tcaaaatgct ggaaatcttg ggaaactatt cctccaactg aacgtgatat ttcttacgct
     3661 tcaagagaat tatcaaaaat tggttctgtt gatattgtta ctgcaagaga tgattctaca
     3721 catgacgctg taaagaattg gctaaaaatg cataatgtaa tcttcaagaa ttatgttggt
     3781 gtgatagaag gaaccgaaaa agcaaaactt gattatgatg ttttcattga tgattcgcct
     3841 ataaatgcag aacacatgtt ggccagggga aaatctgtga tcatttatga acaaccatgg
     3901 aactttggct tttatgatga tagagcaaaa cgaatcaaag aactaaagaa cgctgtacgc
     3961 atcattaaag aaagcattat cgc
//
LOCUS       DASPUS010000033         3570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_293194, whole genome shotgun sequence.
ACCESSION   DASPUS010000033 DASPUS010000000
VERSION     DASPUS010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3570)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3570
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293194"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1759
                     /locus_tag="VEJ68_00730"
     CDS             <1..1759
                     /locus_tag="VEJ68_00730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HXX05327.1"
                     /translation="SRDEIVKASSELPDGQNFELHRPWIDKVVINCDKCKTKMEREQF
                     VLDTWHNSGAAPYASLTDSQYKEDIPAAFLTEGIDQTRGWAYTLLIENVIFNNAPVAP
                     FKSFLFQGHVLDKNGNKMSKSLGNVIDAIELLGKYPVDLVRLYFMWKSSPIEPLNFST
                     DELVSRPYQILSTLYHLHIYFKQNSEYDKFEKKFTVQWAKDKNFLKEPEIWILSKLQK
                     LISSVIESQDKCKFHEATRAIDDFIINSVSQVYIPITREELWAEDDAQRERRLAIYAT
                     LSEILRTLDIVLHPICPFTTQYLHNGMFGEKKNILLEDFPLSQKSLINETIEESFDLM
                     KEAVSVSSAARMKGKLKRRWPLNEAIICVEPTQKAKLESLSVLLTSQLNVEKYQIVEI
                     PKSEGLELLSNLMKLNIPIVPRVELDRKKIGPKAKQDMGKLVSKFSETDPKIIVKGLQ
                     DNGNFVFDLQENKIELNKDDFVIDFAEQESYAMAKRESLIVFISTSRNREMMSRGLVR
                     DIARRLQVLRKERGYNPTDIIGAAYILGLDDEMLEMVKEKQSDLAFLVRVKKIEFSDT
                     AKSYKEEDVDGQKIRISVE"
     gene            1804..2133
                     /locus_tag="VEJ68_00735"
     CDS             1804..2133
                     /locus_tag="VEJ68_00735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05328.1"
                     /translation="MPKQITLDGWLLSHFEVLLKKGSMHVAKTKTPIVLYRNTIEEEA
                     ESYQETVCTLTDGFVIIQIITSGGGIVPSFQEQLVFTVDEFPKWLMKKSKEQLRRCVD
                     FLEEQFK"
     gene            2232..3344
                     /locus_tag="VEJ68_00740"
     CDS             2232..3344
                     /locus_tag="VEJ68_00740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HXX05329.1"
                     /translation="MRLLEYQAKALFSDYHIPIPPGLTSVDIEQGRKDAAKLGFPFVI
                     KAQMAVGGRGKAGAIQKCHNADEFELKYPEIMQKVVKGEKTKAILLEKMADIKKELYL
                     SLFLNRGKRCYTIIASAEGGVEIESVKNQIIHEVGLGNVDSNTAETVGKEMGLKDKAL
                     TQFVDILQKLSKVTVEKEAELAEINPLAILKDDSVLALDGKVIIDDNSMFRHDELRKF
                     QEVSELEEKAEKSGFSLVELDGNIAVVGNGAGLVMSTLDMLSDHGGKPACFLDVGGGA
                     TTDTVYEALTLISKMKKVNGILVNLYGGIVKTTTVATAFIKAYENKLIDVPVFARMSG
                     AEADKSKEMLKGSRTKMFDTIEEAINAAVIGVSKNG"
     gene            3337..>3570
                     /locus_tag="VEJ68_00745"
     CDS             3337..>3570
                     /locus_tag="VEJ68_00745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HXX05330.1"
                     /translation="MADLFELLVGKEGEQDYKKKGVIVQGITGKFGSFHTQQMLAYGT
                     NVVAGVTPGKGGQKLEGVPIYETMKEAVGATGAK"
BASE COUNT         1303 a          614 c          753 g          900 t
ORIGIN      
        1 ctcaagagat gagatagtaa aagcatcatc cgaattacca gatggacaaa actttgaact
       61 tcataggcca tggatagaca aggttgtgat aaactgtgac aagtgcaaga caaaaatgga
      121 aagagaacaa tttgttttgg atacttggca caacagtggg gcagcgccat atgcatcact
      181 taccgattca caatacaaag aagacatccc agctgcattt cttaccgagg gaatagacca
      241 gacaagaggc tgggcatata cattattgat agaaaatgta attttcaaca acgcgccagt
      301 tgctcctttc aaatcatttt tgtttcaagg acatgtcttg gacaaaaatg gcaacaagat
      361 gagcaaaagt ctcggaaatg tgattgatgc aatagaacta cttggcaagt atccagttga
      421 tctggtaaga ttgtatttca tgtggaaatc aagtccaatt gaaccgttaa actttagcac
      481 agatgagctt gtttcaagac catatcagat cctaagtaca ctatatcact tgcatattta
      541 ctttaagcaa aacagcgaat acgacaagtt tgaaaaaaaa ttcacagtac agtgggcaaa
      601 ggacaaaaat tttctaaaag aaccagagat ttggatttta tccaagctcc aaaaattaat
      661 ttcttctgtt atagaatcac aggacaagtg caaattccac gaggcaacaa gagcaataga
      721 tgatttcata ataaattctg taagccaagt ctacattcca attacccgcg aagagttgtg
      781 ggctgaagac gatgcacaaa gagagcgaag actagcaatc tatgcaaccc tctctgagat
      841 tttacgaaca ctagacatcg tattacaccc catctgcccc ttcaccacac agtacttgca
      901 taatggtatg tttggagaga aaaagaacat actcttagaa gactttcccc tctcacaaaa
      961 atcactaatc aatgaaacca tagaagaatc gtttgatctt atgaaagagg cagtttcagt
     1021 ttcatctgcc gcaagaatga aaggcaagct gaaaaggaga tggcctctaa atgaggcaat
     1081 aatttgtgtg gaaccaactc aaaaggcaaa gcttgaatct ctttctgttt tgctaacatc
     1141 ccaactcaat gtggaaaaat accaaatagt ggagattcca aaatcagaag gtcttgaact
     1201 tctctccaac cttatgaaat taaacattcc aattgtaccc agagtagaac tagacagaaa
     1261 aaagattggt ccaaaagcaa agcaagacat gggaaaactt gtatcaaagt tttcagagac
     1321 tgatccaaaa ataattgtaa aaggattaca agataatgga aacttcgtct ttgatctgca
     1381 agaaaacaag attgaattaa acaaagatga ttttgtcata gattttgcag aacaagaaag
     1441 ttatgcaatg gcaaaacgtg aatccctgat tgttttcatc agcacatcaa gaaaccgaga
     1501 gatgatgtca cgcggactag tacgcgatat tgctagaaga ttgcaggtgt taagaaaaga
     1561 gcgaggatac aatccaaccg atatcattgg tgcagcttat atcttaggat tggatgatga
     1621 aatgttagaa atggtaaaag aaaaacaatc tgatttagct tttcttgtaa gagtaaaaaa
     1681 gatagagttt tcagacacgg ccaaaagcta caaagaggag gatgtggatg gtcaaaagat
     1741 tcgaatctct gttgagtagt gattcatcca tccgattaaa tacaaaaaat gctatctaga
     1801 ccaatgccaa agcagataac gctagacggt tggctactgt ctcattttga ggtgttatta
     1861 aagaagggct caatgcatgt tgcaaagacc aagacaccca ttgtcctata cagaaatacg
     1921 atagaagaag aggccgagtc ttatcaagaa acagtctgta cgcttacgga tggttttgtc
     1981 ataattcaga taataacctc aggaggagga atagtaccaa gtttccaaga gcaacttgtt
     2041 tttaccgtag atgagttccc aaaatggttg atgaaaaaaa gcaaagagca gttacgccgc
     2101 tgtgtagatt ttcttgaaga acaattcaag tgacattcag gtatagtttg cgatcttatc
     2161 atagaacgta aaatgatttt acggtaatac catcatacag attataaaga ccatgaaaat
     2221 gagaactttt catgcgttta ttagagtatc aagccaaggc gttattttca gattatcaca
     2281 tccctattcc accaggactt acttctgtcg atattgaaca aggaagaaag gacgctgcaa
     2341 aacttggttt tccatttgtc atcaaagctc agatggcagt gggtggacga ggaaaagcag
     2401 gggccataca aaagtgccac aatgcagacg agtttgagct aaagtatcct gaaattatgc
     2461 aaaaggtggt caaaggagaa aagacaaaag ctattctact tgaaaaaatg gcggacatca
     2521 aaaaagaact ttacctttca ttatttctga acaggggtaa gagatgttat actatcattg
     2581 cttctgcaga aggcggagta gaaatcgagt cggtaaaaaa tcagataata cacgaggttg
     2641 gactgggcaa tgttgacagc aacactgcag aaactgttgg aaaagaaatg ggattaaaag
     2701 acaaagcgct tactcaattt gtagacattc ttcagaaatt atctaaagtt acggtagaaa
     2761 aagaagcaga acttgcagag atcaatcctc ttgcaatact taaggatgat tcggtacttg
     2821 cactagatgg aaaggtcata attgacgaca actcaatgtt caggcatgat gagcttcgca
     2881 agtttcaaga agtatcagaa ttagaagaga aggcagaaaa aagcggcttc tcactagttg
     2941 aacttgatgg aaatattgca gtggttggta acggagcagg actagtcatg tctacactag
     3001 acatgttatc cgatcatggc ggaaaacctg catgctttct tgacgttgga ggcggagcaa
     3061 caactgatac agtatatgaa gcgcttactt tgattagcaa aatgaaaaaa gttaatggaa
     3121 tacttgtcaa tctttatggc ggaatagtaa aaacaacaac agttgcaaca gctttcatta
     3181 aagcatatga aaacaaacta atcgatgttc ctgtttttgc aagaatgtca ggtgcagaag
     3241 ccgacaaatc aaaagagatg ctaaaaggct ccagaacaaa gatgtttgat acgattgaag
     3301 aggcaataaa tgcagcagta attggagtta gtaaaaatgg ctgatctttt tgaattgctt
     3361 gtaggcaaag aaggagaaca agactacaag aaaaaaggcg tgatagttca aggcataact
     3421 ggcaagttcg gttcatttca tacacaacag atgttagctt atggtactaa cgtagtagcc
     3481 ggtgttactc caggaaaagg tggacagaaa ctagaaggcg taccaattta tgaaacaatg
     3541 aaagaagcag taggagcaac tggggcaaag
//
LOCUS       DASPUS010000034         2769 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1525603, whole genome shotgun sequence.
ACCESSION   DASPUS010000034 DASPUS010000000
VERSION     DASPUS010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2769)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2769
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1525603"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..416
                     /locus_tag="VEJ68_00750"
     CDS             <1..416
                     /locus_tag="VEJ68_00750"
                     /inference="COORDINATES: protein motif:HMM:NF015639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HXX05331.1"
                     /translation="DIEKDGNEYTKEVMIEGQKVRVIRKKSNSNMCIFWDDNNKKCSI
                     YNNRPFDCVMYPFDIYLINGRYHWVIYSCNPESGWQWTEEHMKMLENHPQFIEIISNI
                     EAYSNLHEINNLTKLDQLSYTILREVNFKKILKQI"
     gene            543..761
                     /locus_tag="VEJ68_00755"
     CDS             543..761
                     /locus_tag="VEJ68_00755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05332.1"
                     /translation="MAMTTTREFGNLLSQTELNTESDFASALTVSTMIKTMLEIINIK
                     KSDNMDVETKKQFPVIAHEIILLAEQTK"
     gene            868..1722
                     /locus_tag="VEJ68_00760"
     CDS             868..1722
                     /locus_tag="VEJ68_00760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HXX05333.1"
                     /translation="MTIDFANFSLLDPSIESKPQDYEMLLEKLKSELSKFGLTANQSK
                     VFLFLEKYGPSTATQVSKTLKVPRTETYHLLTNLQNKGIVSASFQHPIKFSALSLDKA
                     IGALINAEKERVKSLESQEKNLVEIWNTIPSFKINKEDVKDGKFQMLQGINQMTGKIN
                     DMIDNSKKSIQILASEKDFMKFYHAGFLERIKDSNVEPQFISSNSKKTAYIFEGKLKE
                     NVKRMPIKIKEDLCFIIKDDDELLLFMKNPSEHHQNILAMWTDSISMVYTLKLLFTYI
                     WSNSRYPS"
     gene            1773..2075
                     /locus_tag="VEJ68_00765"
     CDS             1773..2075
                     /locus_tag="VEJ68_00765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05334.1"
                     /translation="MRLIDLDIDKKQVMRALIALSIEKVLLDIGKPMLDKVTNRLYKE
                     YQCYLPDCHEHPDYLNNVLRSVLGNSYITITEAIKLELKENLNDKTVLRLVNTIGT"
     gene            2065..>2769
                     /locus_tag="VEJ68_00770"
     CDS             2065..>2769
                     /locus_tag="VEJ68_00770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05335.1"
                     /translation="MERRMQAYSSAINAQKLLLLSIILVGFIIIFATLLGKESAKIVT
                     DIIYIPVTGVMVALSFVLSFRFRGAGNHGKAWLFFLGTTISWFIAETIWTIYELVYNI
                     NPFPSLADVFFLIGYPLIFCFLMYYLKPVKKGASRKIILGSILVSVAILVPSIYMAYN
                     FDPNVGLFENILATSYPVADSIILVPALVGVVLFFKGEVNFTWSLICLGIVLQSVGDT
                     CFQYATFTNTYYSGHPS"
BASE COUNT          995 a          451 c          454 g          869 t
ORIGIN      
        1 gagacataga aaaagatgga aatgaataca caaaagaagt catgatagaa ggacaaaaag
       61 tcagagttat tagaaaaaaa tcaaattcca acatgtgtat tttttgggac gataacaaca
      121 aaaagtgttc catatacaac aacagaccat ttgattgcgt gatgtatcct tttgatattt
      181 atctgataaa tggaagatat cattgggtca tttactcatg taatcctgaa agtgggtggc
      241 aatggactga ggagcatatg aagatgcttg aaaatcaccc gcaatttatc gaaataatat
      301 caaacattga ggcgtattcc aatcttcacg agataaacaa tttaacaaaa ttggatcaat
      361 tatcttatac aatattacga gaagtcaact tcaaaaaaat tttaaaacaa atttgagata
      421 ttttttctga tcggatttca tgccatgtaa tttctaaaag atacagcaat cagcatatct
      481 acaaaatatg cttccaattt tggcagaaca tccttttatg caaatacgga tttacaagtg
      541 atatggcaat gaccactaca agagaatttg gaaatttact ttcccaaaca gaattgaata
      601 cagagtctga ttttgcatct gcactcacag tttctaccat gatcaaaacc atgctagaaa
      661 tcataaatat aaagaagagt gacaatatgg atgtggagac taagaaacag tttcctgtga
      721 tcgcccatga gattattctt ctagcagaac agactaaata gagtaaattt tactcagctt
      781 ttttcatttt aaacgtgata aaaacgtctg taatgcgata atacatacag atctctaaag
      841 acattataca atattactta caataacatg acaatagatt ttgcaaattt ctccttgtta
      901 gacccatcga tagaatctaa accgcaagat tatgagatgc ttcttgaaaa actcaagagt
      961 gaattatcta aatttggtct cacagcaaat caatccaaag tctttttgtt cttggaaaaa
     1021 tatggtccga gtactgctac acaggtaagt aaaactctca aagttcccag aacagagaca
     1081 tatcatctat taacaaacct tcaaaacaaa ggaatcgtgt ctgctagttt tcagcatcca
     1141 ataaaatttt ccgctctatc acttgataag gcaataggtg ctcttatcaa tgcagaaaaa
     1201 gagagagtga aaagtttaga atctcaggaa aaaaaccttg ttgaaatttg gaatactatt
     1261 cctagcttta aaatcaataa agaagatgtt aaagacggta aattccaaat gctgcaagga
     1321 ataaaccaaa tgactggaaa aattaatgac atgatagata attccaaaaa atcgattcag
     1381 atcctagcat cagaaaagga ttttatgaaa ttttatcatg ctggattcct tgaacgtatc
     1441 aaagattcca atgtagaacc gcaattcata tcatcaaatt ccaagaagac cgcatatatt
     1501 tttgaaggta aattaaaaga aaatgtaaaa agaatgccca taaaaattaa ggaagatctt
     1561 tgttttatca taaaggatga tgatgaatta cttttgttta tgaaaaaccc tagtgaacat
     1621 catcagaaca tacttgcaat gtggacagat tcaatatcca tggtatacac gttaaagtta
     1681 ttatttactt acatatggtc taattccaga tatccttctt agatgcagaa attggagatc
     1741 tgtcaaattt atgactactc tttgtttcaa atttgaggtt gattgattta gacattgata
     1801 aaaagcaagt aatgcgagca ttaattgcat tatctattga aaaagttctt ttagacattg
     1861 gaaaacccat gttagataag gtcacgaaca gattgtacaa agaataccag tgttatcttc
     1921 ccgactgcca tgaacaccca gattatctca acaatgtact aagatctgtt ttaggcaatt
     1981 cttatatcac cataaccgag gccatcaaat tagaactaaa ggaaaatctc aatgacaaaa
     2041 cagtgctaag actagtaaat accattggaa cgtagaatgc aagcctacag ctctgctatt
     2101 aacgcgcaaa aattattgtt actcagtatc atactggtag gttttatcat catctttgca
     2161 acattacttg gaaaggaatc ggccaagata gtcacagata tcatctatat tccggtgaca
     2221 ggcgtcatgg ttgctttatc atttgtttta tcttttagat ttagaggcgc cggtaatcat
     2281 ggaaaagcat ggttattctt tcttggaact acaatctcat ggttcatagc agaaacaatt
     2341 tggacaatat atgaattagt gtacaacatc aatccatttc cttcattggc tgatgtgttt
     2401 tttctaatag gatatccgct gattttttgt tttcttatgt attacttaaa accagtaaaa
     2461 aaaggagctt caagaaaaat tatactcgga tcaattttgg tgtcagtggc tatattagtt
     2521 ccaagtattt acatggcata taattttgat ccaaatgttg gtttatttga aaatatttta
     2581 gcaacaagct atcctgttgc agattccatc atattagttc ctgccttagt tggtgttgtt
     2641 ttatttttca aaggagaagt aaatttcaca tggtcattga tttgtcttgg cattgtttta
     2701 cagtcagttg gagatacttg tttccagtat gcaactttta ctaatactta ctattctggg
     2761 catccatca
//
LOCUS       DASPUS010000035         2659 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1388645, whole genome shotgun sequence.
ACCESSION   DASPUS010000035 DASPUS010000000
VERSION     DASPUS010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2659)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2659
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1388645"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /gene="rpl7ae"
                     /locus_tag="VEJ68_00775"
     CDS             complement(<1..350)
                     /gene="rpl7ae"
                     /locus_tag="VEJ68_00775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008297732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7Ae"
                     /protein_id="HXX05336.1"
                     /translation="MAKAYYVKFQVPADLVSPIYEAVRVAHQSGKVKKGTNEVTKAIE
                     RGISKLVVIAEDVEPPEVVAHLPILCEEHSIPYGFVPSRQELGKALGIDVTSAAAAIL
                     DSGDAQHIVEQIVAS"
     gene            complement(411..1769)
                     /gene="glmM"
                     /locus_tag="VEJ68_00780"
     CDS             complement(411..1769)
                     /gene="glmM"
                     /locus_tag="VEJ68_00780"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HXX05337.1"
                     /translation="MRVNLARLFGTNGIRGVFGQSFNLDFISDIASSIGSFFKKGPIL
                     VGYDGRESSVIISKIVCASLSSVGLDSLICGLVPTPCLQFATKKLGYNGGIMITASHN
                     PPEYNGLKPSAKDGVEISREDELKVEKIYFDKIWKTTKNLGKIGNENRAVDTYLNGIK
                     TQVNAKKIRSKKFKVVLDLGNGAQAITAPLLCKDLGCDVISINGQIDGSFPGRGSEPT
                     PQNLNKLSHAVVKFKADFGVGFDGDGDRSIFCDDKGMILTGDRSALLISKYLLDKYPR
                     SKVVTTINSTSVIDLIAAESKSEVIRTKVGSVEVSRTMVQKNAIIGFEENGGFMYGKH
                     NQVRDGAMTLGLVLDLLAKTDKTISEKMDDLPQSFTTKGKIECSKDDFKKIIQDLKKL
                     SFKKDLTDGIKIFLDESSWIMVRLSGTEPIARIYAEANSQDKLDENFDKYMSKIKSIV
                     DR"
     gene            1808..1892
                     /locus_tag="VEJ68_00785"
     tRNA            1808..1892
                     /locus_tag="VEJ68_00785"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1844..1846,aa:Leu,seq:tag)
     gene            2239..>2659
                     /locus_tag="VEJ68_00790"
     CDS             2239..>2659
                     /locus_tag="VEJ68_00790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HXX05338.1"
                     /translation="MDKTTIELTVVGKDHEGVVASFTNLIFQNGGNIEKINQNVIKGL
                     FGMYLEASFTKKFDVHKFNATAKRLANNLKMEVNIHYEATKRKKAAILVTKEPHCLQA
                     MLEARHKNQLKGEIAVIVGTENTLTKMAKKARIPFVLI"
BASE COUNT          810 a          521 c          432 g          896 t
ORIGIN      
        1 gatgccacta tctgttcaac aatgtgttgt gcatctcctg aatctagtat cgcagctgct
       61 gcagaggtga catcaattcc tagtgctttt cccaattctt gtctgcttgg aacaaatcca
      121 tatggtatac tatgttcctc acaaagtatt ggaagatgtg ctactacctc tggtggttca
      181 acatcctcgg ctatgactac tagtttactt attccccttt caattgcttt tgtgacctcg
      241 tttgtgccct tctttacctt accactttga tgagccactc taactgcttc ataaattgga
      301 ctaactaggt cagctgggac ttgaaacttt acataataag ccttagccac atgtatcacc
      361 cattgggatc atttccattc cttgagtgtt tttaattggt tttaaaagtg ttatctgtct
      421 actattgact ttatttttga catgtattta tcgaaatttt catccagttt gtcctgagaa
      481 tttgcttcag catatattct tgctattggt tctgttccac ttaatcgaac cataatccag
      541 cttgattcgt ctagaaaaat cttgatgcca tcggtcagat cttttttgaa cgatagtttc
      601 tttagatcct gaatgatttt tttaaaatca tcttttgaac attctatttt tcctttagtg
      661 gtaaaggact gtggaagatc atccattttt tcagatattg tcttgtcggt tttagcaaga
      721 agatcaagta ccaatccaag tgtcattgca ccatctctga cttgattatg tttcccatac
      781 atgaaacctc cattttcttc aaatccaatt attgcatttt tttgtaccat ggttctggat
      841 acttctacac tccctacctt tgttcgtatt acttcagatt ttgattccgc agcaattagg
      901 tctattactg atgtggaatt aatagtagtc acaacttttg atcgtggata tttgtctaag
      961 aggtatttag aaataaggag ggcagatcta tctccagtca aaatcattcc cttatcatca
     1021 caaaaaatac ttctgtcacc atcaccatca aatcctactc caaagtcagc cttgaattta
     1081 actacagcgt gagataattt attcaaattc tgcggagtag gctccgaacc tctacctgga
     1141 aaagaaccgt caatttggcc attaatacta atgacatcac agcctaaatc tttgcacagt
     1201 aaaggagcag ttattgcttg tgccccattg cccaaatcca gaacaacttt gaattttttt
     1261 gacctaattt tcttggcatt tacttgtgtt ttgattccat tcagatatgt atcaactgcg
     1321 cgattctcat ttccaatttt accaagattc tttgtagtct tccatatttt atcaaaatag
     1381 attttttcta cttttagttc atcttctctt gatatctcta caccatcttt tgcacttggt
     1441 tttaatccat tatactccgg aggattatgt gatgctgtta tcattatacc tccgttgtag
     1501 ccaagctttt ttgtagcaaa ttgtagacat ggagttggaa ctagaccaca gatcaaagaa
     1561 tctaatccaa cagaactaag agaagcacaa actatttttg atattataac acttgattcc
     1621 ctaccatcat atcctacaag aattggacct tttttgaaaa agcttccaat ggatgaagcg
     1681 atatcggata tgaaatcaag gttaaagctt tgaccgaata cacctcttat tccgttagtt
     1741 ccaaataatc ttgccaaatt gaccctcatc aacaatagat aaatttgtct taaaagtcat
     1801 ggtgcatgcg ggagttgcca agcctggtca aaggcgcagg gcttaggacc ctgtctttta
     1861 ggagttcgtg ggttcaaatc ccatctcccg cattcattgc actatacaaa gttgcatttc
     1921 tttatgattg tgaaaatgag tactacaaaa attgttagaa cattcataac aatgccagtc
     1981 acccaaagtt gaacaaactc tgcaagtctt tacaggattg ttatgatcat agctatttcc
     2041 tctactacgg cttttgtgag aatttcgtga tctgtccatt acttttcctc attgaagtat
     2101 atagatgaaa aattgtagat tcccattcaa tcactcatta cggaaccgaa atatctagtc
     2161 ctactagcat ttgacaatac gttgtatttg gaaaggatat ttaagcatta ataaagtacg
     2221 ctgtatctac caattaaaat ggataagaca actatagagc ttaccgtagt tgggaaggac
     2281 cacgagggtg tagttgcaag ttttaccaat ttaatatttc aaaatggagg aaacatcgaa
     2341 aaaataaacc aaaatgtaat caagggtctt tttggaatgt atctcgaagc gtcttttaca
     2401 aaaaaatttg atgttcataa attcaatgca acagcaaaaa gattagcaaa taatcttaag
     2461 atggaagtta acatacatta tgaagctaca aaaagaaaga aagcagcaat acttgttact
     2521 aaagaaccac attgtctgca agccatgtta gaagctagac acaaaaatca gctaaagggt
     2581 gaaattgcgg taattgtagg aacagaaaac acattaacaa aaatggcaaa aaaagcaaga
     2641 attccatttg tattaatta
//
LOCUS       DASPUS010000036         3085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1936778, whole genome shotgun sequence.
ACCESSION   DASPUS010000036 DASPUS010000000
VERSION     DASPUS010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3085)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3085
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1936778"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..220
                     /locus_tag="VEJ68_00795"
     CDS             <1..220
                     /locus_tag="VEJ68_00795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HXX05339.1"
                     /translation="YILIGCELGAEDDIVKKLKHFEKVTDARVVYGDYDIVVEAEAET
                     ETQMDNLIAKKIRKMEKVRSTITLGVVS"
     gene            complement(198..407)
                     /locus_tag="VEJ68_00800"
     CDS             complement(198..407)
                     /locus_tag="VEJ68_00800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05340.1"
                     /translation="MRAGIPVIGLGVIILVFGMIFFLQGNSIVGPKSSFMYSNPKWIA
                     YGLYIAAFGMAVLAAGIWLSLRRPK"
     gene            513..1202
                     /locus_tag="VEJ68_00805"
     CDS             513..1202
                     /locus_tag="VEJ68_00805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05341.1"
                     /translation="MDEWGPDLFEIRKSRNWLDIAIFAGAASLALIVYLIFGPQIDKI
                     TQQSPIIIDLMFIPSFLIGLLYGKKMSERVMEPSGARSPLKRAIVKIFLCIFIMGSIL
                     TSVSFALHGGAHPTQKSIFTDGLIPWLKDFVKTNGGLTFLIVSSITLMAAATKRIVGM
                     DGFLSKIFTFIGTYIFFSMVALSLTHSDPTHSQVYLYAFYQAGIVGGIFYGLNKFTTR
                     ANMWEDYMNGY"
     gene            complement(1199..1660)
                     /locus_tag="VEJ68_00810"
     CDS             complement(1199..1660)
                     /locus_tag="VEJ68_00810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05342.1"
                     /translation="MVTLPAFAANFDMSGLNLNHPGIRWAWKINADQYTFLVNTTSNY
                     DMQNVTFNKDTKTLTFLGNSPHTGNIAEIEIPSNLVGGDYTVYHNGTQISPIILKNGN
                     LTTVILNFNDTGKSTTDVVGTTYLPEFAGVAPVIMAISFVILFLTVRYRKL"
     gene            complement(1699..2157)
                     /locus_tag="VEJ68_00815"
     CDS             complement(1699..2157)
                     /locus_tag="VEJ68_00815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008301618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15e"
                     /protein_id="HXX05343.1"
                     /translation="MPSYQDQVWLKMWKENSPELRAKAIEWRKEHALTRIDRPSRLQK
                     ARRLGYKAKQGIVVVRMRVGRGNMRKKRPVAGRRPKHLGVLRIKPALSMQRVAERRVL
                     ERHPNMKLLGSYYLYQDGVYLWYEVILADSSHPSIIKDKEMRGKISGLKN"
     gene            2268..2879
                     /locus_tag="VEJ68_00820"
     CDS             2268..2879
                     /locus_tag="VEJ68_00820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05344.1"
                     /translation="MRIFLISFLVVFFIFGIAYAAPQVSISTTKPTYEYGQNLSFVIK
                     VSEVTGDIATLNIVDNSGQSSSPIYYKINNPISNITSPYPFYKTTFSPGSYYIDIQYS
                     GTNATTSFQLEDSGNIVIPPEFKTVADSWSKGQTSNKLFASHVQALIQYGIIKIDNYQ
                     EQNIVSFPSWFKNDATWWADGSISDNDFGLAIKYLIDSKIIQV"
     gene            complement(2885..>3085)
                     /locus_tag="VEJ68_00825"
     CDS             complement(2885..>3085)
                     /locus_tag="VEJ68_00825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05345.1"
                     /translation="VNIEQGKSFIQKTFGEIISKMPYLRTFVKSLGLIDYIIIGSIAL
                     VIVLVIASVARHKSTRIARGIK"
BASE COUNT          941 a          608 c          560 g          976 t
ORIGIN      
        1 atacatcttg ataggatgtg aacttggcgc agaagacgat atagtaaaaa aattaaagca
       61 ttttgagaag gtcacagatg caagggtagt ctatggcgat tacgatattg ttgtagaagc
      121 agaggcggag acagagaccc agatggataa tctaattgca aaaaagatac gaaagatgga
      181 aaaagtaaga tcaactatta ctttgggcgt cgtaagctaa gccaaattcc tgctgcaaga
      241 actgccatac caaatgctgc aatgtatagt ccataagcaa tccatttggg attagagtac
      301 ataaaagagg atttgggacc cacaatcgag tttccttgga gaaagaagat catcccaaag
      361 actagaatga ttaccccaag accgatgact ggaattcctg ctctcatggc atatcattag
      421 gcagactcgc ataaaaggca aaatgagttg ataaaatagg caaattcatt ttgattgatt
      481 tctttaatgt gttttctgaa agccaaagta aattggatga gtggggacct gacctatttg
      541 aaataaggaa gagtagaaac tggctagata ttgccatctt tgcgggagca gcgtctcttg
      601 cactgatagt ctatctgata tttggaccac aaatagacaa aatcactcaa cagtcaccaa
      661 taatcatcga tttaatgttc attccatcat ttttgattgg acttctttat ggaaaaaaaa
      721 tgtccgaacg agtcatggaa ccttccgggg caagaagccc gctcaagaga gcaatagtga
      781 aaatattttt gtgcatcttt atcatgggct cgattttaac atcagtgtct tttgccctgc
      841 atggtggtgc acatccaaca caaaaatcaa tctttacaga tggcctgatt ccctggttaa
      901 aagactttgt taaaacaaat ggaggtctaa catttcttat tgtatctagt attacattga
      961 tggctgctgc tacaaagaga attgttggaa tggatggatt ccttagcaaa atttttactt
     1021 ttattggaac atacatattc ttctcaatgg ttgcactgag cttgacacat agcgacccaa
     1081 cacattccca agtctacctt tatgcattct accaagcagg aattgtcgga ggaatatttt
     1141 atggactcaa taaatttaca acgcgtgcaa acatgtggga agactacatg aacggatact
     1201 agagtttacg atatcttacc gttaaaaata aaattacaaa agagattgcc attataacag
     1261 gtgcaactcc tgcaaactct ggaagatatg ttgttcctac tacatcagtc gtagatttac
     1321 cagtgtcatt aaaattcaag ataacggtag taagatttcc attcttaagt atgatgggag
     1381 aaatctgtgt cccattatga taaacggtat aatctcctcc taccaagtta cttggaatct
     1441 caatctctgc aatgtttccc gtatggggac tgttgcccaa aaatgtcagt gtcttggtat
     1501 ctttgttgaa tgtgacgttt tgcatgtcgt agtttgatgt tgtgtttaca agaaaggtat
     1561 actggtctgc atttatcttc catgcccacc taattcctgg atggtttagg ttaaggccac
     1621 tcatgtcaaa gttagcagca aaggctggaa gtgtaaccat tcctaaaatt agtacaaccg
     1681 ataagacaag tatagttctc aattcttcaa accagagatc ttgccacgca tctctttgtc
     1741 ttttattatg cttggatgcg aagagtctgc aagtattacc tcataccaca gataaacacc
     1801 gtcctgatag agatagtatg aaccaagaag tttcatgtta ggatgtcttt ctaaaactct
     1861 gcgctcagcc actctctgca tactaagcgc tggcttgatt ctaagaacac ccaagtgttt
     1921 tggtcttctt cctgccactg gtcttttttt acgcatgtta cctcggccta ctcgcattcg
     1981 cacaacaact attccttgtt ttgctttgta tcctagtctt cttgcctttt gtagtctgct
     2041 tggtctgtcg attctagtta gagcatgctc ctttctccat tctatagcct ttgctctaag
     2101 ttctggagaa ttttctttcc acatttttag ccagacttgg tcttggtaac taggcatata
     2161 ctcgccacta ctgaattacc ccttaatatt ctgttacagc gccttgtgat gttattacga
     2221 tagcaaagat ccaaaaccta ttatgaaatc tattgattac aaattttatg aggatttttc
     2281 ttatttcatt tcttgtagta ttctttattt ttggtattgc atatgcagca ccccaagtct
     2341 caatctccac aaccaagccc acttatgagt acggccaaaa tctttctttt gtcatcaagg
     2401 tatcagaagt tactggagat attgctactt tgaatatcgt tgataattct ggacaatctt
     2461 catctcccat ctattataaa ataaataatc ccatctcaaa catcacgtct ccttatcctt
     2521 tttacaaaac cactttttcc ccaggctctt actatattga catacaatat tctggcacta
     2581 atgcaacaac tagttttcaa ctagaagatt ctggaaatat tgtcattcct cctgaattta
     2641 agactgtggc agattcctgg tcaaaggggc agacatcaaa caaattattt gcatcccatg
     2701 ttcaggccct aatacaatat ggaataatca agatagacaa ctaccaagaa cagaacatag
     2761 tatcttttcc gtcatggttt aaaaatgatg caacatggtg ggcagatgga tcaatttccg
     2821 acaatgactt tggtttggca ataaagtatc tcatagactc taagataatt caagtgtgat
     2881 acttctactt tataccacga gctattcttg ttgacttgtg tcttgccaca ctagcaatta
     2941 ccagtactat aacaagtgct attgaaccta ttatgatata atcaatcaga ccaagtgatt
     3001 ttacaaatgt tcgaagatat ggcatttttg agataatctc accaaatgtt ttttgaataa
     3061 aggatttgcc ctgttcaata tttac
//
LOCUS       DASPUS010000037         2329 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1252598, whole genome shotgun sequence.
ACCESSION   DASPUS010000037 DASPUS010000000
VERSION     DASPUS010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2329)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2329
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1252598"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..348)
                     /locus_tag="VEJ68_00830"
     CDS             complement(<1..348)
                     /locus_tag="VEJ68_00830"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HXX05346.1"
                     /translation="MNVLSIAGSDPSSGAGIQGDVKTFSTLGVHGLTVITALTSQNTS
                     KFFTVNPVSSSTVKKQLRSVLADFKINAIKIGMVYSSQIIKTLHDELKHITIPIILDP
                     IFESTTGGKLLRDD"
     gene            572..1903
                     /gene="thiC"
                     /locus_tag="VEJ68_00835"
     CDS             572..1903
                     /gene="thiC"
                     /locus_tag="VEJ68_00835"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HXX05347.1"
                     /translation="MGTQMSAARRGTATEEMMTVAKDEEVTIDWLMSKIANGSIIIPH
                     NNVRPQKIHVVGIGNGMKTKVNVNIGNSTLTKNLEEEIKKAKVAVKYHSDTIMDLSDG
                     GDVGLFRKKLLEAAPITFGTVPVYEAYSYGVEKHKNPLDITEDDFLNAFEHNIKDGVD
                     YTTIHSGITKDIAKRILAVKRHAGIVSKGGTITAAWMLKYDKENPYFEHFDYLIELAR
                     KYDVTFSLGDALRPGSILDSHDELQVQEMINVSRLVKRAHEKDVQVMVEGPGHVPLNE
                     VAANVRLAKSLIGDVPYYVLGPLVTDVASGHDHIASAIGAAISASEGVDLLCYLTPAE
                     HLALPTAEEVKAGLIAYRIAAHAADLVKLRDKAIKWDMEMTEARRTLNWEKQIALSID
                     PEEASRIHARTGQLKGNTVPCTMCGGACVYIMLPQQRYNTPDEKEKLQQTR"
     gene            complement(1886..2290)
                     /locus_tag="VEJ68_00840"
     CDS             complement(1886..2290)
                     /locus_tag="VEJ68_00840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HXX05348.1"
                     /translation="MHSTKIVTVFLTQNNKFLILKRSEKVKTMKSLWAGISGIIEGNE
                     DPLYRAKKEIWEETGIPENCLTLIKSAPEILIDSPQYDNHEWVVFPFLFSVQDPTITL
                     NWENKEYRWVIPQDIKQFETVPSLERVLSSLL"
BASE COUNT          761 a          401 c          472 g          695 t
ORIGIN      
        1 atcatctcga agaagttttc cgcctgttgt tgattcaaaa attggatcca aaattatggg
       61 aattgttatg tgtttgagtt catcatgaag agtctttatt atttgactgc tgtaaaccat
      121 cccaatcttt atcgcattga tcttgaaatc agcaagcact gatctcaact gcttttttac
      181 tgttgatgat gaaactggat ttactgtgaa aaattttgag gtattctgac ttgtcagtgc
      241 agttatgact gtgagtccat gcaccccaag ggtagaaaaa gtcttcacat ctccctgtat
      301 gcccgcgcca gaagaaggat cagaaccagc tattgataac acattcatgt cttacaataa
      361 aaaactctca ttataggtgt atttttaagg atatgatttt ttggaagacc ttttggaata
      421 agttcgtagt ctcaaataat gtatgttgca ggaaaggaaa atcttgcaat tatatctatg
      481 aatttacagc tatattcaag tcacgatctt ttgggcttga tttgtcttct aaaacacgtt
      541 taaattcaat tatcatgtaa aataagttaa cttgggaaca caaatgagcg ccgcccgtag
      601 aggcacagct actgaagaaa tgatgacggt ggcaaaagac gaggaggtta caattgattg
      661 gcttatgtca aagattgcaa acggctccat tataatcccg cataataatg taagaccaca
      721 aaaaatacac gtagtaggaa ttggtaatgg aatgaaaaca aaagtcaatg ttaacattgg
      781 caattctaca ctgacaaaaa acttggaaga agagataaag aaagcaaagg ttgcagtaaa
      841 atatcattca gatacaatta tggatttgag tgatggcggt gacgttggac tttttagaaa
      901 aaaacttctg gaagctgctc caataacctt tggtaccgtt ccagtatacg aagcatatag
      961 ttatggagtg gaaaaacaca agaatcctct cgatatcaca gaggatgatt ttcttaatgc
     1021 atttgaacat aacataaagg atggggtaga ttataccaca atacattctg gtattacgaa
     1081 agatattgca aaaagaattc ttgctgtgaa aagacatgca ggaatagtga gcaaaggagg
     1141 aactataact gctgcatgga tgttaaaata tgacaaggaa aatccatact ttgagcattt
     1201 tgattatctg atagaacttg ccagaaaata cgacgtgact tttagtctag gagatgcact
     1261 acgacctggt tctattcttg actcgcatga tgaattgcag gttcaagaaa tgataaacgt
     1321 atcaagattg gtaaaacgcg ctcatgagaa agatgttcaa gtgatggtgg aaggaccagg
     1381 acatgtgcca ttaaatgagg tggcagcaaa cgtaagattg gcaaaatcat taattggcga
     1441 tgttccatat tatgttcttg gaccacttgt aacagatgtt gcttcagggc atgatcatat
     1501 tgcaagtgcc attggcgcag ctatttctgc tagtgaagga gtagatttgt tatgttatct
     1561 tactcctgca gaacatttag ctctccctac agctgaagag gtaaaggctg ggttgatagc
     1621 ttacagaatt gcagcacatg cagcagatct ggtcaaacta agagacaagg caataaaatg
     1681 ggatatggaa atgacagaag cacgacgaac tttgaactgg gaaaaacaaa ttgctttatc
     1741 tattgatcct gaagaagcct ctcgcataca tgcaagaact ggtcaactaa agggaaacac
     1801 tgtaccatgc acgatgtgtg gaggagcatg tgtttacata atgttacctc aacaacgata
     1861 taacactcca gacgaaaaag aaaaactaca acaaactaga taatactctc tcaagacttg
     1921 gaactgtttc aaattgtttg atatcttgag ggattaccca tctgtactct ttgttttccc
     1981 aattaagcgt aattgtagga tcttgcaccg aaaataaaaa tggaaagacc acccattcat
     2041 ggttatcgta ttgaggcgaa tcgatcagaa tctcaggtgc acttttgatg agcgttagac
     2101 agttctctgg tattccagtt tcttcccata tttctttttt ggctctatat agaggatcct
     2161 catttccttc tatgatgcca cttatcccag cccagaggct tttcatggtc tttacttttt
     2221 cgcttctttt taaaatcaga aatttgttat tttgagttaa aaacactgta actatcttgg
     2281 tggagtgcaa ttacttttca gcagaattta ccattgtgac taatttctt
//
LOCUS       DASPUS010000038         2421 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1254110, whole genome shotgun sequence.
ACCESSION   DASPUS010000038 DASPUS010000000
VERSION     DASPUS010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1254110"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..310
                     /locus_tag="VEJ68_00845"
     CDS             <1..310
                     /locus_tag="VEJ68_00845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lysine biosynthesis enzyme LysX"
                     /protein_id="HXX05349.1"
                     /translation="IMIGDKVVAAIYRYSGEGQWKTNMALGGKAEQLKVTKELEDICI
                     KAKNAVQGQIVGIDLMESKEKGLVVHEVNNTTEYKNTVRVTGVDVPALMIDYALQLRK
                     "
     gene            314..1450
                     /locus_tag="VEJ68_00850"
     CDS             314..1450
                     /locus_tag="VEJ68_00850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HXX05350.1"
                     /translation="MDSSITITPRYSVKMLEKTLRLYTPSLSEKALAEFLADKCDDLG
                     FENIRIDDVGNLIATKGSGSPKILLCGHMDTVPGKIKVRNENGLIYGRGASDAKAPLM
                     AMLLAAASLQNNNGTIVFAAVVDEEGNATGIKSLVKQKPDIDYAIFGEPSGIRNITIA
                     YKGRIAINLKINVGNSTHASAPWLAKNAIEESYVFTSAIKNALEAEQNNKPKSMLLTA
                     ALTEIKGGSSHNVTALECDAIMDIRIPVDMNCKMVGEKITTTVQEMSKKQGVSAFHSV
                     LDETEPFEAPHNSPLVRALTLGIMDIEKTRPQLIRKTGTGDMNIIGNSLNIPVVTYGP
                     GDPHASHTIDEHVSTDEYLRGIEVFKRMMYHLKRLHESKSKKSV"
     gene            1498..>2421
                     /gene="dph5"
                     /locus_tag="VEJ68_00855"
     CDS             1498..>2421
                     /gene="dph5"
                     /locus_tag="VEJ68_00855"
                     /EC_number="2.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004164 - diphthine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0017183 - protein histidyl modification to
                     diphthamide [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diphthine synthase"
                     /protein_id="HXX05351.1"
                     /translation="MLWFIGLGISGADDLGLNTLKILKTADVVFLENFTSPIGKNELS
                     KIKRLIKGKFQIAPRWMVEDGKIILSAAKKKNVVLLSYGDPYIATTHIELRTRAESEK
                     IRTKSIHAASAITSLIGECGLHYYKIGRPVTVMKELQSLATVYYTIYENLIKGNHCIL
                     ILEYNSDANFFLEPKEAFLNLLFAEKEQKRNVIDETTFVVIASRIGSKNQSIIAGKIS
                     SLINKDFGKPPHTIILPGRLHFTEHDALKLFAKCIDDPFDNSSKIQKISDQMLAKYIP
                     KARKALDEVSKQFREDKNLEPVIENAQLYIDD"
BASE COUNT          872 a          443 c          487 g          619 t
ORIGIN      
        1 aataatgatt ggcgacaaag ttgttgctgc gatatatcga tattctggag agggccaatg
       61 gaagacaaac atggcattag gcggcaaggc agagcagcta aaggtaacaa aggaattgga
      121 ggatatttgt atcaaggcaa aaaacgctgt tcaaggtcaa attgtaggga tagatctcat
      181 ggaaagtaag gaaaaaggcc ttgtagttca tgaagttaac aatacaacgg aatacaaaaa
      241 taccgtaagg gttactggcg tagatgtacc agccttgatg atcgattatg cactacagtt
      301 gagaaaataa gaattggact cctcaattac tattacacca aggtattcag taaagatgtt
      361 agagaagact ctgagattat acacaccttc tctttccgaa aaggcccttg ctgaattttt
      421 agcagacaag tgtgatgatc ttggatttga gaacatccga atagatgatg taggtaattt
      481 gatagcaacc aaaggctctg gctctcccaa gatattactt tgtgggcaca tggatacagt
      541 tccgggcaaa atcaaagtac gaaatgaaaa tggtctcatt tatggtcgtg gagcatcaga
      601 tgcgaaagca ccattgatgg caatgctact tgctgcagca tcacttcaga acaataatgg
      661 aaccatagtc tttgcggcag tagtagatga ggaaggaaat gcaactggta tcaaaagctt
      721 ggtcaagcaa aaacctgata ttgattatgc aatttttggg gaaccaagtg ggatacgaaa
      781 tatcactatt gcttacaaag gaagaatagc tataaacctt aaaatcaacg ttggaaacag
      841 cactcatgct agtgcaccct ggcttgccaa aaacgcaatt gaggaatcat atgtttttac
      901 ttcagccatc aagaatgcct tagaggcaga acaaaacaac aaaccaaaaa gcatgctgtt
      961 aactgcagct ttaacggaaa ttaaaggcgg ttcaagtcac aatgtaactg cactggaatg
     1021 tgatgccatc atggatatta gaattccagt agacatgaac tgtaagatgg ttggagaaaa
     1081 gattaccact acagtccaag agatgtcaaa gaaacaaggc gtaagtgctt ttcattctgt
     1141 cttggatgaa accgagccct ttgaggctcc tcacaactca ccacttgtta gagcattaac
     1201 cctaggaatt atggatatag aaaaaacaag accacagctt atcaggaaga ctggcaccgg
     1261 agacatgaat atcattggca attcattgaa catacccgtc gtgacctatg gacctggtga
     1321 tccacatgct tctcatacca ttgatgaaca tgtatccaca gatgaatatc tgagaggcat
     1381 agaagttttc aaacgaatga tgtaccacct caaaagactt catgaaagta aaagcaagaa
     1441 atcagtgtaa atacgaataa aacgaacctc aaaatataca cctaaagaat tcatgccatg
     1501 ttatggttta ttggtcttgg catctcaggg gctgatgatc ttggtttaaa cacattaaaa
     1561 attctaaaga ctgctgatgt tgtattccta gaaaatttta ccagccccat aggaaagaat
     1621 gaactatcca aaattaagag attgataaaa ggaaagtttc agatcgcacc ccgttggatg
     1681 gtggaggatg gcaagattat cctttcagca gctaaaaaga aaaacgttgt tctactctct
     1741 tatggggacc cgtacattgc aacaactcac attgaattac gaacaagagc agaatcagaa
     1801 aaaattagga caaaatcaat tcacgctgcg tcggcaataa cgtcccttat tggcgaatgt
     1861 ggattacatt actacaagat aggacgtcca gtaaccgtca tgaaagaact acaatcatta
     1921 gctactgtct attacaccat ttatgaaaac ctgattaaag gaaaccattg catcctaata
     1981 ctagaataca acagtgacgc aaatttcttc ctagaaccaa aagaagcttt tttgaatctt
     2041 ctctttgctg aaaaggaaca aaaaagaaat gtcatagatg aaaccacctt tgtcgttatt
     2101 gcatccagaa ttggctcaaa aaatcaaagt atcatagcag gaaagatttc atctttaatc
     2161 aacaaggatt ttggaaaacc tcctcataca attattcttc caggaagatt acatttcaca
     2221 gagcatgatg cactaaagtt atttgcaaag tgtattgatg acccttttga caactcgtcg
     2281 aaaattcaga aaatatctga tcagatgctt gcaaaataca taccaaaagc aagaaaagca
     2341 ttagatgagg tttcaaaaca gttcagggaa gataaaaatt tggaacctgt catagagaat
     2401 gctcagttat acatagatga t
//
LOCUS       DASPUS010000039         3354 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1391193, whole genome shotgun sequence.
ACCESSION   DASPUS010000039 DASPUS010000000
VERSION     DASPUS010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3354)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3354
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1391193"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            23..343
                     /locus_tag="VEJ68_00860"
     CDS             23..343
                     /locus_tag="VEJ68_00860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal L7Ae/L30e/S12e/Gadd45 family protein"
                     /protein_id="HXX05352.1"
                     /translation="MVKLLEKAIKDAVEDGKCSFGTKEVLSTIKNSKLVVLSHSIPSS
                     MTQKILEAAKNSKVPTLNYDGSSVELGRLCGTQFRISTLSLKTLSDVNLKAIIKDVES
                     EKKQ"
     gene            414..872
                     /locus_tag="VEJ68_00865"
     CDS             414..872
                     /locus_tag="VEJ68_00865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NusA-like transcription termination
                     signal-binding factor"
                     /protein_id="HXX05353.1"
                     /translation="MTETIKLTTDQIKLMSLFQNVTGATARDCIEDERQDRVIFVVNQ
                     GKMGLAIGKGGATIRNLQNVVKKNVELVEFSDDPAEFLKNMLNPKLVTEVKINKRLDG
                     SLQAIVLVDAKKKGIVVGREGRNAEKARLLAKRYFQISSVLIQSPEKILE"
     gene            879..1316
                     /locus_tag="VEJ68_00870"
     CDS             879..1316
                     /locus_tag="VEJ68_00870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013905141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HXX05354.1"
                     /translation="MAKSPLGLFAGRVLRDKRKRQKWSIGIYKRRELGLDRKSSPLGG
                     APQARGIVLEKVGIEAKQPNSAVRKCVRVQLIKNGKTVTAFLPKDGALNFVDEHDEVH
                     VEGMGASMGGAMGDIPGIRWKVFKVNGTSLKELVYGKKEKPRR"
     gene            1320..1919
                     /locus_tag="VEJ68_00875"
     CDS             1320..1919
                     /locus_tag="VEJ68_00875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008298130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HXX05355.1"
                     /translation="MTETLNVLLFRRWDLTKIEIKDPGLRNVISLKKEIMPMSFGRSA
                     LKRFNKAEVNIVERLINKLLHFGKKYAKNTGRMGGKKIHAINTVKAAFEIIHLKTGKN
                     PIEVLIRAIENSAPNEDTTRIVYGGTVYHVSVDVAPLRRIDLALRFIAEGVRDASFSN
                     PKAIEENLAEHLILASANDMGAPSVKKKNELERIAMASR"
     gene            complement(1940..2043)
                     /locus_tag="VEJ68_00880"
     tRNA            complement(join(1940..1974,1990..2043))
                     /locus_tag="VEJ68_00880"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1991..1993),aa:Gln,seq:ctg)
     gene            2146..2370
                     /locus_tag="VEJ68_00885"
     CDS             2146..2370
                     /locus_tag="VEJ68_00885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05356.1"
                     /translation="MLVKKALKGDFILSQYPAFHDSMMESFEIVSIDGKISIYYFKDG
                     TLQIEADETNPVYRRIVRKVNGLISKKDYL"
     gene            complement(2726..3046)
                     /locus_tag="VEJ68_00890"
     CDS             complement(2726..3046)
                     /locus_tag="VEJ68_00890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05357.1"
                     /translation="MLQEKGKYASATQNRRLVWERVMWPLILELNDISFTIEQYKKKR
                     DEVCKELNIPPSRVAGGFVSLLLKGVLYKEKNLYYIHYRLIPYMRLRASCDYATAVRE
                     VSTK"
     gene            3086..>3354
                     /locus_tag="VEJ68_00895"
     CDS             3086..>3354
                     /locus_tag="VEJ68_00895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HXX05358.1"
                     /translation="MQSKIQESLDMLSKNWKIEPIIQDFILGKIKDVSDFQIKVNDVI
                     FHIPYLQEENGYVLWKCYWPDCHNCCERQGRLPLTSDDLITISRNL"
BASE COUNT         1191 a          540 c          656 g          967 t
ORIGIN      
        1 atgtacatga aagtggtaga agatggttaa actattagaa aaggcaatca aagacgcagt
       61 tgaagatggt aaatgttcat ttggaaccaa agaagtctta agcactataa aaaattcaaa
      121 actagtagta ttatcacatt ctatcccatc ttcaatgaca caaaaaatac tagaagcggc
      181 aaagaattct aaagttccaa ctctaaacta tgatggctca tccgttgaac tagggagatt
      241 gtgtggtacc cagtttagaa tttcaactct gtcgctcaaa acactgagtg atgtaaacct
      301 taaggcaatt ataaaagatg tagaatctga gaagaaacaa taaatgtctt tttttttaag
      361 aacgctctat caagatttaa atgtcccacc acgggatcga gtttaaaaaa ggcatgacag
      421 agacaatcaa actaacaaca gaccaaataa aactaatgtc gcttttccag aatgtgactg
      481 gagctactgc aagagattgt atagaagatg aaagacagga cagagtgata tttgtagtaa
      541 atcagggtaa gatgggctta gctattggaa aaggaggagc tactatcaga aatctccaaa
      601 atgttgtaaa gaaaaatgtt gaactggtcg aattttcaga cgatccagct gaatttctca
      661 agaatatgct aaatccaaaa ttagtaacag aagtgaagat aaacaagaga cttgacggat
      721 cactccaagc catagtttta gttgatgcaa agaagaaagg aattgtggta ggtcgtgaag
      781 gcagaaacgc agagaaggca agactcttgg caaaaagata ttttcaaatt tcaagtgtcc
      841 taatacagag tccagaaaaa atattggagt aatgaagtat ggcaaaatca ccacttggtt
      901 tatttgcagg acgagttctt agagacaaac gaaaaaggca aaaatggtct attggaatct
      961 acaagagaag agaactagga cttgaccgaa aatctagtcc tcttggaggt gcaccacaag
     1021 ctcgtggtat cgttctagaa aaagtgggta tagaggcaaa gcaacctaac tcggctgtac
     1081 gaaaatgtgt tcgtgttcaa ttaattaaaa atggtaaaac cgtaactgcg tttcttccaa
     1141 aagacggtgc tcttaatttt gttgatgaac atgatgaagt tcacgtggaa ggaatgggtg
     1201 catctatggg tggtgccatg ggagatattc ctggaattag atggaaggtc ttcaaagtaa
     1261 atggaacttc attaaaagaa ctagtatatg gaaagaagga aaaaccgaga agataagaaa
     1321 tgacagaaac tttgaacgtt ttactattta gaagatggga cttgacaaaa atcgaaatca
     1381 aggatccagg attgagaaat gtaatctctc ttaaaaaaga gattatgcca atgtcatttg
     1441 gacgttcagc tcttaagaga ttcaataaag ctgaagtaaa tattgttgag agactcataa
     1501 acaaactatt gcattttgga aagaaatatg caaagaacac tggcagaatg ggaggcaaga
     1561 aaattcatgc tatcaacaca gtcaaagcgg catttgagat aattcatcta aagacaggga
     1621 aaaaccctat tgaagttttg attagagcaa tagagaattc tgcaccaaac gaagatacaa
     1681 ctaggatagt gtatggtgga accgtatatc acgtatctgt cgatgtagct ccattgcgaa
     1741 gaatagatct tgcattgaga tttatcgctg aaggtgtacg agacgcttct ttttcaaatc
     1801 caaaagcaat tgaagaaaat ctagcagaac atctcatact tgcctctgca aatgatatgg
     1861 gcgcaccatc tgtcaagaag aaaaatgagc tagaaagaat agctatggcc tctagatagt
     1921 ggctttaaga taaaatagat agcccgaggc agattcgaac tgccgtctcc aggtatcctc
     1981 tcataagatc cagagcctgg aatccctaac ccaaaaattg tttggccact agactatcgg
     2041 gctactagac gagtgagatt tgttgagaat ataattatta gcattgaata tgatgtatta
     2101 ttacttcact tgataaatta taaaaaagtc ccaccagatg tttacttgct tgtaaaaaag
     2161 gcactaaaag gagattttat tctttcacag tatcctgctt ttcatgattc tatgatggaa
     2221 tcatttgaaa tcgtatccat tgacggaaaa atatctattt attatttcaa agatggcacg
     2281 ttacaaatag aggcggatga aacaaatcca gtatatcgaa gaatagtaag aaaagttaat
     2341 ggcttgatat caaaaaaaga ctatctttag aatttttctc acagatggtg gttcattacg
     2401 tagagtttgt catatacgat actgacaaca tcttatcttt actcaatgtt atgattatac
     2461 agaaactgta ggggttcttt ttggtaaagt ggaactcaga cacaccacac cccgctttcc
     2521 gatcctgcag tttcaattta ttttttagtg aaaacatgca tcactttttt atacttgatt
     2581 gatactaatg atactagaaa tgatcgaatt tgtaacatat gtgttagcat atttgattag
     2641 ctgcacacat agctgcgcag gctgctagtc catttatcat tttcaaaaat taaaagtttg
     2701 aatctgtata tttgctaaaa ccggattatt tagtactgac ttctctgact gcagtagcgt
     2761 aatcacaact agcccttagt ctcatatatg gtattaatct ataatgtatg taatacagat
     2821 ttttttcttt gtacaagact ccttttaata aaagagagac aaaacctcca gcaactctgg
     2881 aaggtggaat gtttaattct ttacacacct catcacgttt ctttttgtat tgttctatgg
     2941 taaaactaat gtcatttagc tccaaaataa gtggccacat gactctttcc caaactagcc
     3001 ttctgttctg tgtggccgat gcatattttc ctttttcttg tagcattggc aacgttcaaa
     3061 agttctagtc ttaatttatt agttgatgca aagtaaaata caagaatctt tggacatgtt
     3121 gtccaaaaac tggaagattg agccaataat tcaagatttt attctaggaa aaataaagga
     3181 cgtatcagat tttcaaatca aagtaaatga tgtcatattt catattccat atctgcaaga
     3241 ggaaaatgga tatgtattat ggaaatgcta ttggcctgat tgccataatt gttgtgaaag
     3301 acaaggaagg ttgccactta cctctgatga tctaataaca atcagtcgaa atct
//
LOCUS       DASPUS010000040         2036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_160652, whole genome shotgun sequence.
ACCESSION   DASPUS010000040 DASPUS010000000
VERSION     DASPUS010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_160652"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..338)
                     /locus_tag="VEJ68_00900"
     CDS             complement(<1..338)
                     /locus_tag="VEJ68_00900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HXX05359.1"
                     /translation="MATKVVDEKLLTKIGNTPLVKLNSLSSTSVTAYAKLESYNPFGS
                     VKDRAAYWMIKDGEERGTLKKNESIIIEPTSGNTGIALAGIANLLGYKTEIVIPEKAS
                     DETKKAIESLG"
     gene            complement(342..581)
                     /locus_tag="VEJ68_00905"
     CDS             complement(342..581)
                     /locus_tag="VEJ68_00905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HXX05360.1"
                     /translation="MSESSPTKTIDVRGMFCPEPVFRTKIEIERLIVGNVLKVLADDP
                     ASEEDISRWVNRNGHKLIDIKKSDKDLEFTIQKVK"
     gene            complement(652..1572)
                     /locus_tag="VEJ68_00910"
     CDS             complement(652..1572)
                     /locus_tag="VEJ68_00910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP-associated domain-containing protein"
                     /protein_id="HXX05361.1"
                     /translation="MASLRVELHCHNEFSNFHLGVKETPYDCGITIQEQLEQAYKIGL
                     DAFFITNHNTLDGYNQLIQYRDDHEKFKNIRVYPGEEITTDTGIHVLAYGLTDTIKPG
                     KSFEEILDMIKTQGAISCAPHPFGLNNGLREKAIRCELIEVFNSNNVDRYSNLRAYNF
                     ARSHNMIEVAGSDSHVVSTLGRCVNLIESENTLDNILNSMKKGRITIGNTDYITSKEM
                     IAHAKYKIENSRDDIIRFFIENHPHLTGLCCFLIRAFESNPNSVIWTAVYKIAVRLIT
                     KLSNKINFKNQDYTILYERNLRAILPMILT"
     gene            complement(1625..>2036)
                     /locus_tag="VEJ68_00915"
     CDS             complement(1625..>2036)
                     /locus_tag="VEJ68_00915"
                     /EC_number="6.3.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013481630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="coenzyme F420-0:L-glutamate ligase"
                     /protein_id="HXX05362.1"
                     /translation="AGVDESNVSKNYATLLPKDPNKSAAMLRDQIKEKTGKNTAVVIS
                     DTFGRPFRYGQTNIALGVSGISSITDYVGTKDNFGRILRVTEIATVDEICSAAELVMG
                     KSIHVPIAIVRNYVYDNKNSINNLNRTKSEDLFR"
BASE COUNT          581 a          381 c          304 g          770 t
ORIGIN      
        1 ccaagtgatt caattgcttt tttggtctcg tcacttgctt tttccggaat aactatctcg
       61 gttttataac ctaatagatt tgcaattccc gcaagtgcaa tacctgtatt tccggaagtc
      121 ggttcaatga ttatactctc gtttttctta agagttcctc tttcttcccc atcttttatc
      181 atccagtaag ctgccctgtc ctttactgaa ccaaatggat tgtatgattc taattttgca
      241 taagctgtta ctgatgttga tgaaagcgaa tttaatttta caagtggagt atttcctatc
      301 tttgtcaaaa gcttttcatc aacaactttt gttgccaatt actatttcac cttctggatt
      361 gtaaattcta gatctttatc agattttttt atgtcaatta atttgtgtcc gttcctgtta
      421 acccatcgtg aaatatcttc ttcagatgca ggatcatcgg ctaatacttt gagaacattt
      481 cctactatca gtctttcaat ttctattttt gttctaaaga ctggctctgg acagaacatg
      541 ccacgaacat ctattgtttt agttggactt gattctgaaa tatcggttca cccgtaaaaa
      601 aaattcagtg gcgagatatt aaaatctatt catacacgca aaaaagtcta ctcatgttaa
      661 tatcattggc aatattgctc taaggttacg ttcatacaaa atagtataat cttgattttt
      721 gaaattaatt ttatttgaaa gtttagtaat gagacgaact gctattttat agaccgcagt
      781 ccaaattaca ctatttggat ttgactcaaa tgcccgtatc aaaaaacaac acaaacctgt
      841 gagatgcgga tgattttcta taaaaaatct tataatatca tctctagaat tttctatttt
      901 gtattttgca tgtgctatca tttctttgct tgttatgtaa tcagtatttc ctatagtaat
      961 tctacctttt ttcattgaat ttaagatatt gtcaagagtg ttttctgatt caattagatt
     1021 aacacatctt cctaatgtag ataccacatg agaatcacta cctgcgactt ctatcatatt
     1081 atgagatctt gcaaaattat aagcacgcaa gtttgaatac ctgtcaacgt tattactatt
     1141 gaaaacctca attaactcac aacgaattgc tttttctcgc aatccattat taagaccaaa
     1201 tggatgtgga gcacacgata tcgctccctg tgtttttatc atatcaagaa tctcctcaaa
     1261 actctttcca ggttttatag tatctgtcag tccgtaagct aagacatgta ttcccgtgtc
     1321 agttgttatt tcttctccag gatatactcg aatattttta aatttttcat gatcgtccct
     1381 atactgtatt aattggttgt aaccgtctaa tgtattgtga ttagttataa agaatgcatc
     1441 aagtcctatt ttgtatgctt gttctaattg ttcttgaatt gttataccac aatcataagg
     1501 tgtttccttt acaccaagat gaaaatttga aaattcgtta tgacagtgta attcaactct
     1561 taaactagcc aatgtttatc gctagtcata acctatgaat ataatctttg ttttcagatt
     1621 ttatttatct aaacaggtct tctgattttg ttctgttaag attatttatg gaattcttgt
     1681 tatcatagac atagtttctt acaattgcta ttggaacatg gattgatttt cccatcacaa
     1741 gctctgctgc agaacatatc tcatcaacag ttgcaatttc agtcactcgt agaatccttc
     1801 caaagttgtc ttttgttccg acataatcag tgatggaaga tattccagaa actcctaagg
     1861 cgatgttagt ttggccatat ctaaatggac gcccaaaggt atcagatatt acaacagcag
     1921 tgttttttcc ggttttttct tttatttgat ctcgcaacat tgcggcagac ttgttaggat
     1981 cctttggcaa gagggtagca taattcttgc tcacattact ttcatctacc cccgca
//
LOCUS       DASPUS010000041        12481 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_299378, whole genome shotgun sequence.
ACCESSION   DASPUS010000041 DASPUS010000000
VERSION     DASPUS010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 12481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12481)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12481
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299378"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..260
                     /locus_tag="VEJ68_00920"
     CDS             <1..260
                     /locus_tag="VEJ68_00920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016939681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Gar1/Naf1 family protein"
                     /protein_id="HXX05363.1"
                     /translation="GEVLHLASSGRVIIRLSKPLRDGQIIVDGTGTKVAKVSEMIGPF
                     DAPYASATPLTNNIKKHLGKQVYITEETPAMKPKRFKGRRK"
     gene            257..1216
                     /locus_tag="VEJ68_00925"
     CDS             257..1216
                     /locus_tag="VEJ68_00925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013482660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TFIIB-type zinc ribbon-containing protein"
                     /protein_id="HXX05364.1"
                     /translation="MTITELQTHCPECRSALIDDIHSGEKICSGCGLVAMEQMADYGP
                     ESRATNLEDKMKSARATGQTTYSQHDLGIRTEIALGTKDFSGKTISSDIANQMYNLRK
                     WQTRIRVASPRERRLANILSKIGETCQSLSLPKNVTESASMIYRNFEGQAEAKGKSVA
                     CMSAATIYMACKQCDVVRSLDEICAATGSTKDEKMNVKLTAKYYRTLVMELGSKTAPV
                     VTLEKYISKIANLAKLEVRVERLAAEIAEKTENHEIADGKAPNGLAAAYLYIASTLLG
                     QSILQRDVSSVAGITEVTIRNRCKEILTAYKIKITLRPALVRN"
     gene            1335..1769
                     /locus_tag="VEJ68_00930"
     CDS             1335..1769
                     /locus_tag="VEJ68_00930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HXX05365.1"
                     /translation="MTELVRNLMKNQVITADSSVSIKDAAKLMSDAGVGCVVVMEKNI
                     AVGIVTERDFVRRIAAEGKSFSVPIKEVMSSPLIVINPDESAWELAELMKLRRIHKVP
                     VVQENRLVGIVTTTDLTKLCSAGSDSEMRRIADQILLRLKPK"
     gene            1859..2647
                     /gene="sufC"
                     /locus_tag="VEJ68_00935"
     CDS             1859..2647
                     /gene="sufC"
                     /locus_tag="VEJ68_00935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009362262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HXX05366.1"
                     /translation="MAVLEIKDLHVTRDGKEILKGVNLKTGPGEVHAIMGPNGSGKST
                     LAYTILGHPKYEVTKGDILLDGQSILSLSADERAKKGLFLAFQYPTEVSGVGYSHFLR
                     TAYNALSKSLGDQNREVFLTVREFQNYLKKNLDQVGLKQDFLSRYLNEGFSGGEKKRS
                     EVLQMAVLQPKISILDEPDSGLDIDAVQAVAKAISQVSRKDATVIVITHYVRILKFLD
                     KLDFVHVMAQGKVIKEGPKELADELEQKGYGWLGIQDKPEQINP"
     gene            2928..3027
                     /locus_tag="VEJ68_00940"
     tRNA            join(2928..2967,2983..3027)
                     /locus_tag="VEJ68_00940"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2964..2966,aa:Leu,seq:caa)
     gene            3164..4372
                     /locus_tag="VEJ68_00945"
     CDS             3164..4372
                     /locus_tag="VEJ68_00945"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HXX05367.1"
                     /translation="MNRKIPGPNAKRVIDKMKKHAYDSTFMYSLVIANGHDCVIEDLD
                     GNQFLDFTSNIGACPLGYSHPAILEVLAEYSTNGTHKIAGQDFYSKEHADLAEKISSI
                     IPHNFKTFFINSGAEAVENAIKIAYRRMGPLPGISCAGAFHGRTLGALTFTSSRPVQK
                     YNFPEFSVKRIKFCTKDNDEEINAVESLLKENKIAFILSEVVQGEGGYNVASRKFIKN
                     LRKYSKQYGVPLILDEVQSGVGHTGKWWAFEHYDVIPDIMSAAKALQIGATMYDKKLE
                     PSERSALSSTWGGGSRIDMAIGARIIDVIKQDNLLENATRMGNMLKKGLQEIVGKNGV
                     IDVRGLGLMIGLEFDTRTRREKKIVELFKNGLLTLGAGQKSLRIIPPLVITKEQIEEG
                     LELMNKVLLH"
     gene            complement(4369..5622)
                     /locus_tag="VEJ68_00950"
     CDS             complement(4369..5622)
                     /locus_tag="VEJ68_00950"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HXX05368.1"
                     /translation="MSYSNLSKMNFEVSNEQKAFLEQVDSTCRSIREYETKCYLEEKV
                     NDRIVPDFSKIGMLGCPISTKYGGLGYDILTYAFALERIGREGNSMRTFFSVHISIGQ
                     LVLQNWADEDQKRQYLPSTTGGRSLMAFALTEPNAGSDPASMETKFEETNDGFLLKGK
                     KHWVGNGTIAKVMTTYAKGPDGRISAFIVDTDSKGFHAEEMKNKMGLLSIKNAEISFE
                     NCFVPKRNLLGTKGKGLSIAYSALIDGRLSVAAGAVGVMKDCLEESIRYSQKREQHGS
                     ALAKKQLIQEHLSSMIVNIESSRWLVYRAAMARQKLQDYVEGLKDKDARWQERLNRDD
                     KEYSILRRKADRLAAIAKLHTSNAAFECANRAVQIFGSFGYQKTNRVARHFLDSRAII
                     IYEGANEVLKLKIASLELGEKYQAY"
     gene            complement(5666..5788)
                     /locus_tag="VEJ68_00955"
     CDS             complement(5666..5788)
                     /locus_tag="VEJ68_00955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05369.1"
                     /translation="MSAKAWKCYRCNLVFSDEYHAGLHQDLSKHPVREISTIRA"
     gene            5957..6589
                     /locus_tag="VEJ68_00960"
     CDS             5957..6589
                     /locus_tag="VEJ68_00960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HXX05370.1"
                     /translation="MSKAQTFEKLKIEIRKRIEKHDPAHDFEHIMRVYRNAEQIAKKE
                     GADMKIVLTAALLHDIVSYKKSDPRSKNSSSESAKEAKKILQRHNYGSNEIKIISDAI
                     NEHSFSKGVVPKTLEGKVLQDADRLDAIGSVGIARAFAVGGAEGRSFYNIQDPFCVSR
                     YPDDSKWTIDHFYKKLLLLDKKMNTKTAKIEARRRIKIMKQFLKQLEREI"
     gene            complement(6586..6897)
                     /locus_tag="VEJ68_00965"
     CDS             complement(6586..6897)
                     /locus_tag="VEJ68_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05371.1"
                     /translation="MRDDEGFEIDRAFDLLPHVIGASWATVWFRVNKIRRPTNEEFRN
                     KVVEYYKMLDPIINVYSQNEDFKEMTEHIRNRHHQEIERILAGKNDEIEKRFKRYVDY
                     R"
     gene            complement(6894..7874)
                     /gene="hemB"
                     /locus_tag="VEJ68_00970"
     CDS             complement(6894..7874)
                     /gene="hemB"
                     /locus_tag="VEJ68_00970"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HXX05372.1"
                     /translation="MSYPNLRLRRLRKTNKIRELLEEVRLSPKDLICPIFVQEDLKSK
                     IQGESMPGFERLTLSDVVNEVNSIAELKIPAVMIFGIPSNKDEKGTSAFSNDGIVQKT
                     ISDIRKNLGNDIAIMSDVCLCQYTSAGHCGLVKGNQIDNDSSLETLGKIAVSQAQAGA
                     DVVSPSAMMDGQVKAIRHALDNAGFTDVAIMSHSAKHRSSLYSPFKDMAHSAPTFGDR
                     KTYQLPYTNPKEAMREVETDIAEGVDIVMIKPALAYLDLIAMTRERFNVPISAYSVSG
                     EYALVKAAAMQGWIDEKEVTLEILTAIKRAGADMIVTYFSKIAAKALSEK"
     gene            complement(7909..9165)
                     /gene="hemA"
                     /locus_tag="VEJ68_00975"
     CDS             complement(7909..9165)
                     /gene="hemA"
                     /locus_tag="VEJ68_00975"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HXX05373.1"
                     /translation="MPNSIINARITFRKSPIHMLERFTFRDINSAYDSFIKHSGLKEC
                     VLLQTCNRVELFGCGDDADIERIKKTWASVSGLEENAFKENLEISQGTEAYQHLLKLT
                     SGLDSLVVGEEQILGQVKESISEARELKASGTNLNTLFDKAIRVGTRVRQATGIGRGS
                     ISIGSMAVKLAEENIDDLKSKHILLIGTGEAASLVAKSLKKRGIDFIVTSRTFERSKS
                     FVETSGGRPVKFEDAIVNFKTVDVLFVATIAPYFLVTYDRVNEAMEYRKNGMLIMDLS
                     NPRTVDEKVATIKKIKMMNLDQIAEMVDKNMRTRMGVVSSAEKIINEELPVVEAAMKR
                     LEVEPIVKNVFKEIDSARIKELKKALQMLGETDEQKIRIIDQLTQAIVEDIISTPMNN
                     LRKASEQGDSEILRTVMKLFDYKTKE"
     gene            complement(9155..9850)
                     /locus_tag="VEJ68_00980"
     CDS             complement(9155..9850)
                     /locus_tag="VEJ68_00980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010195434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional precorrin-2
                     dehydrogenase/sirohydrochlorin ferrochelatase"
                     /protein_id="HXX05374.1"
                     /translation="MESINIKQRQRDPLIVDLNLKGNLAIVVGGGNEGLKKVNALLTQ
                     DCKILVISDSTNREIEKYVKQKKIEFKKIKLQNADFLKKYKPFMVLATTDDRNLNRKI
                     VDQAKKMRCYAYAADDPEVSDFAFGSVINIQDTVQIAVSTGGRSPAMARQLRIQAEKV
                     FKKLIKKEDIYQIKLQDFARRQAKTRLDTFPQRKKFLYSVMNDNHVKQLIADGNLKKA
                     QKRVIEMLGDYAK"
     gene            9901..10914
                     /locus_tag="VEJ68_00985"
     CDS             9901..10914
                     /locus_tag="VEJ68_00985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HXX05375.1"
                     /translation="MDNLDKEILNEIQWTFPLVPKPYSEIAKKFSITDDEMMQRLRTL
                     KQAGIIRQLSAIFDTRRLGYKSALVAMAISPDKLDQIANQINRHPGVSHNYERNHEYN
                     LWFTLAVPPGSDLKTEIDKFSKLQGINKVRMLPTIKLFKIGVKLEMVEDKKAEVKPTE
                     EKKKIRDVKFVATDDDKNYIRELQKDLEITERPFLKAAQRLGITEEELFEKARYYEEI
                     GVMRRFAAILRHREVGFLANGMIVWKVPEERIEEVGAKLGAFPQVSHCYQRPVYPDWP
                     YNVFSMVHCKSNDDAQVIAKQIEDQISVHDYKILFSSREFKKTRVEYFVEHDFKIEEP
                     ITV"
     gene            complement(10928..11926)
                     /locus_tag="VEJ68_00990"
     CDS             complement(10928..11926)
                     /locus_tag="VEJ68_00990"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HXX05376.1"
                     /translation="MKYRTLGKSGIKVSEIGFGAWTLGLDWWGKKIEDDEAKKLLKRA
                     YDLGINYFETGDIYGRGKSEKLIGEVFAGMRNDVVISTKYGYDIYGNEQIGHKELPQK
                     FTPEFTEFALQKSLERLQTDYVDVYGLHNPKIQTIRDKKVIEYLDKKVREGKIKSYQV
                     ALGPAIGWTEEGLEAMEKTNATAVQTVYNILEQHPGNILIEQGEKHNVGILVRVPDAS
                     GILTGKVTADTKISEKDHRSVRSGDWVKQSLQKVEQLMPIAKRNGLNITELAIKYILS
                     HRGVSSVLPTVVSEEEVSMFSQMTDGKYLNDSDKKQVIELFNQWPSYEIKASVQTA"
     gene            complement(11923..>12481)
                     /locus_tag="VEJ68_00995"
     CDS             complement(11923..>12481)
                     /locus_tag="VEJ68_00995"
                     /inference="COORDINATES: protein motif:HMM:NF020398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1802 family protein"
                     /protein_id="HXX05377.1"
                     /translation="ELGIMKALKEWATVVKALENGNQTVLLRKGGILETASGFNLEAK
                     KFALFPTYEHQENASLKSQYFVYLADARENMPKNGYNRITSIAEVIEEKDMTSMEKIE
                     ELSPFHIWSDNYMVERMNWMPEKPMKAVFLKVFTISSTEIPVLPDYQGCKSWIELNVN
                     IETGKPVLSEAELQQKLSEFRRIVN"
BASE COUNT         3840 a         2393 c         2275 g         3973 t
ORIGIN      
        1 taggcgaagt attgcatcta gcaagtagcg gtagggtcat cataagactt tctaaaccat
       61 taagggatgg ccagataatt gtagatggaa ccggaaccaa agtcgccaaa gtttcagaaa
      121 tgataggtcc atttgatgca ccatatgcat cagcaactcc gcttactaat aatatcaaaa
      181 aacatcttgg aaaacaagtt tacatcacag aggaaactcc tgcaatgaaa ccaaaaagat
      241 tcaaaggaag aagaaaatga ccataacaga acttcaaaca cattgtccag aatgtcgttc
      301 agcattgatt gacgacattc atagtggaga aaaaatttgt tctggctgtg gcttggtcgc
      361 aatggaacag atggcagatt acggaccaga atcaagggca acaaatctag aagacaagat
      421 gaaatcagca agggcaacag gccaaacaac ttattcacaa catgacttgg gaattaggac
      481 tgagatagcc ctcggaacca aagactttag cggaaaaaca atttcaagcg acattgcaaa
      541 tcagatgtac aatctacgca aatggcagac aagaatcagg gtagcatcgc ccagggaaag
      601 acgactagca aatattttat ccaagatcgg agagacatgt caatcactat cactgccaaa
      661 gaatgtaaca gagagtgcat caatgatata cagaaatttt gaaggccaag cagaagcaaa
      721 aggaaaatct gttgcttgta tgtcagctgc aacaatttac atggcatgta agcaatgtga
      781 tgttgtaaga tcgctagatg aaatatgcgc tgctactgga agtacaaaag acgaaaaaat
      841 gaatgtaaaa ctaacggcaa agtactatag aacactcgta atggaacttg gttcaaaaac
      901 agcgcccgta gtaacccttg aaaaatacat ctcaaaaatt gcaaatcttg caaaacttga
      961 agtacgtgta gagagactcg ctgccgagat agctgaaaag acagaaaatc atgaaattgc
     1021 agatggtaag gctccgaatg gtcttgctgc tgcatatcta tacatagcct caactcttct
     1081 tggacagagc atactgcaga gagacgtctc aagcgtggca ggaattacag aagtaacgat
     1141 acgaaataga tgtaaggaaa tcctgactgc ctacaagatc aaaattaccc ttcgaccagc
     1201 attagtcaga aactaaaacc ccctcttttt gtttatttct taagaaataa tgatgatatt
     1261 ctatcgaaag acacagatta tcattactga caatcaaatt ccacgttttt aagtaggata
     1321 tacgaacaaa ccatgtgaca gaattagtta gaaacctcat gaaaaatcag gtaattactg
     1381 cagattcatc tgtttccatc aaggatgctg ccaagttaat gagtgatgca ggtgttggtt
     1441 gtgtagttgt catggaaaaa aacattgcag tagggattgt aacagaaaga gattttgtta
     1501 gaagaatagc tgcggaagga aaatcatttt ctgttcccat aaaagaagta atgtcttctc
     1561 ccctaattgt aatcaatcca gatgaatcag catgggaatt agctgagctt atgaaactaa
     1621 gaagaattca caaagttccc gtagttcaag aaaacaggtt agtaggaatt gtgacaacta
     1681 ctgaccttac aaaattgtgt agtgcaggat cagattcaga aatgcgaagg attgcagacc
     1741 aaattttgct acgccttaaa ccaaaataaa aagccctcat tctaatatta tagaataagc
     1801 attagcttca tctaattttt cattagatta tatatcgaaa acgatgttgt aatcatgcat
     1861 ggcagtatta gagattaagg atttacatgt tacaagagat ggaaaagaaa ttctcaaagg
     1921 agtaaatctc aaaacaggtc ctggtgaagt tcatgcaata atgggaccaa atggttctgg
     1981 aaaaagtacc cttgcatata caattcttgg tcatccaaaa tacgaggtta ccaaaggcga
     2041 tatcttgctt gatggtcaaa gtattttatc gctttcagct gatgaaaggg caaagaaggg
     2101 attattttta gcatttcaat atccaacaga agtttcaggt gttggatact cacactttct
     2161 aagaacagct tacaacgcac taagcaaatc cctaggagat caaaatcgcg aagtcttttt
     2221 aactgtcaga gaatttcaaa attatttaaa aaagaatctt gatcaagtag gactcaaaca
     2281 agattttctt tcaagatatc tcaatgaagg attttcgggt ggtgaaaaaa agagatcaga
     2341 agttttgcaa atggcagtat tacaaccaaa aatttcaatt cttgacgaac ctgactctgg
     2401 tttggatatt gatgcagttc aagctgtcgc taaagcaata agtcaagttt caagaaagga
     2461 tgcaacagtg atagtgatta cgcactatgt gagaattctc aagttcttag acaaacttga
     2521 ctttgtacat gtgatggcac aaggcaaggt tatcaaagaa gggccaaaag aacttgcgga
     2581 tgaattagaa caaaaaggat atggttggtt aggcattcaa gacaagccag agcaaattaa
     2641 tccttaaaaa aagacaataa caatgtctaa aatttcttac atatcaaatc aaacctctct
     2701 tttgaaatga tatgtcatgt caggtcagtc aaatcaattc tacgcagaat gtatgaagta
     2761 ttttgaagcc ttgagaagac aggggaaaca agattttgcc tttgaggatg aatttttcta
     2821 taccatgcca gcaatatcag aaaaattggt aagtgacaat aagttttagc tgttaaaatc
     2881 tgcagattac ggtttcagtt atatattcag tgtttgaatc tcaccttgca gaggtatcga
     2941 agcccggcca accgagaagg actcaagatc ttggcatggg acatcctttc ccttaggggt
     3001 tcgggggttc aaatccctcc ctctgcattt ttcttacttt ctttgctttt ctttgccgct
     3061 gtttacgagt aagttcatca aatcctctat gattttctcc catagaggat tatacgagta
     3121 tttattagaa aatttttcca ttgtttataa tatgaagtca accatgaatc gaaagatacc
     3181 tgggccaaat gcaaagcggg tcattgataa aatgaaaaaa catgcctacg attctacctt
     3241 catgtattct cttgtaattg caaatggtca tgactgtgtc atcgaagatc tagacggcaa
     3301 ccagtttctt gattttactt ctaacattgg cgcttgccct ttaggatatt cacaccctgc
     3361 catattggag gtcttggcgg aatattctac caatggtaca cacaaaattg caggtcaaga
     3421 cttttactcc aaagaacatg ccgaccttgc agaaaagatt tcatctataa tcccacataa
     3481 ttttaaaaca tttttcatca atagcggagc agaggcagta gaaaacgcaa taaaaatagc
     3541 ttaccggaga atgggtccac ttccagggat ttcatgtgca ggagcattcc atggtagaac
     3601 attgggtgca cttactttca cttccagcag accggttcaa aaatataatt ttcctgaatt
     3661 ctcagttaag cgcataaaat tttgtacaaa agataacgat gaagagatta atgctgttga
     3721 atccctgctc aaagaaaata aaattgcatt tattttaagt gaagtagttc aaggagaagg
     3781 tggttataat gttgctagta gaaaatttat taaaaatttg aggaaatatt caaaacagta
     3841 cggtgtacct cttattttgg atgaggtaca gtcaggagtt ggccacacag gtaaatggtg
     3901 ggcttttgag cattatgatg tgatacctga cattatgagt gctgccaagg cattacagat
     3961 tggtgcaaca atgtatgata aaaaattgga gccaagtgaa cgttctgcgt tatcaagcac
     4021 ttggggaggt ggaagtagaa tagacatggc cattggtgca aggataattg atgtaataaa
     4081 acaagacaat cttttagaaa atgcaactcg tatgggaaac atgctaaaga aaggactaca
     4141 agaaattgtg ggtaaaaatg gagttattga tgtcaggggt ttgggcctaa tgataggatt
     4201 agagtttgat acaagaaccc gtcgagaaaa aaagattgta gaattgttca aaaatggtct
     4261 tcttactctt ggcgctggac aaaaatcatt gagaattata ccaccacttg taatcacaaa
     4321 ggagcagatt gaagaaggat tggaattaat gaataaggtt ttgcttcact aataagcttg
     4381 gtacttttct ccaagctcaa gagaggctat ctttaacttt agtacttcat ttgcaccttc
     4441 ataaattata attgctctag aatccaaaaa gtgccttgca actctgttag tcttttggta
     4501 tccaaatgaa ccaaaaattt gaactgctct attagcacat tcaaaagcag cattagaagt
     4561 atgtaattta gcaattgccg caagcctatc tgcctttctt ctcaatatgg aatattcctt
     4621 gtcgtccctg ttcagtcgtt cctgccaacg agcgtcctta tcctttagcc cctcgacata
     4681 atcttgaagc ttttgccttg ccatagctgc acgatatacc aaccatcttg aactctcgat
     4741 gtttactatc atgcttgaga gatgttcctg tattagctgt ttttttgcaa gagctgagcc
     4801 atgctgttcc cttttttgtg aatatctgat tgattcctca agacaatctt tcatcactcc
     4861 aacagctcct gctgcaacac ttaatcttcc atctatcaat gcactataag caatgctcaa
     4921 tccttttcct tttgttccaa gtagattcct ttttggtaca aaacaatttt caaacgagat
     4981 ctctgcattt tttatactta agagacccat cttattcttc atctcttctg catgaaatcc
     5041 tttagaatcg gtatcaacta taaacgctga aattctacca tcaggtcctt ttgcataggt
     5101 tgtcattact tttgcaattg ttccattacc tacccaatgt ttttttcctt tcaaaagaaa
     5161 accatcattg gtttcttcaa attttgtttc catcgaagca ggatcacttc ctgcatttgg
     5221 ttccgtaagt gcaaatgcca ttaaacttct ccctccagta gtacttggaa gatactgacg
     5281 tttttgatcc tcatcagccc aattttgaag aactaattgt ccaatggaaa tatgaacaga
     5341 gaaaaaagtg cgcattgagt tcccttctct tcctattcgc tcaagagcaa atgcgtatgt
     5401 tagaatatca tatcccaaac ccccatattt tgttgatatg ggacacccaa gcatcccaat
     5461 tttactaaaa tctggaacta ttctatcatt tactttttct tccaggtaac atttggtctc
     5521 atattctcta attgatctgc atgtactatc tacttgttca aggaatgctt tttgttcatt
     5581 ggagacttca aaattcattt tggagagatt agaatatgac atgtagagta ttcggcgata
     5641 tcccacaata agattattgt gtattttatg ctcttatcgt actaatctct cggaccggat
     5701 gctttgatag gtcttggtgt aaaccggcat gatattcatc agaaaataca agattgcatc
     5761 tgtaacactt ccatgctttg gcgctcatat attcaatacg tgtttttaat ttataaatat
     5821 tttgaacaat agattccgtt tttggaaaat gttgttaaaa ttaaaaaatt ttaaaacttt
     5881 tcatctaatt tttcattcaa aaatactggt cacaactagt ttatgaccat gacactacaa
     5941 ccaagattta ggtcgtatgt caaaggcaca aacatttgaa aaattaaaaa tagagataag
     6001 aaaaagaatt gaaaaacacg atcccgcgca tgactttgaa cacattatga gggtttacag
     6061 gaatgctgag caaattgcga aaaaagaagg cgcagacatg aagattgttc ttactgcagc
     6121 attactacat gatattgttt cttataaaaa atcagatcct aggtccaaaa attcatcttc
     6181 ggaaagtgca aaagaggcaa agaaaatact tcaaagacat aactatggaa gtaatgaaat
     6241 taagataatc tcagatgcca tcaatgaaca tagcttttca aaaggtgtgg ttcctaaaac
     6301 gttagaggga aaagtattac aggatgcaga tagacttgat gcgataggat cagttggcat
     6361 agcaagagca tttgcagttg gcggagctga aggaagatca ttttataata ttcaagatcc
     6421 tttttgcgtt tcacggtatc cagatgattc caagtggaca attgatcact tttacaaaaa
     6481 actgttgtta ttagataaaa agatgaatac aaagactgca aagatagagg caagacgaag
     6541 aattaagatc atgaaacaat ttcttaaaca acttgaacgt gaaatctagc gataatcgac
     6601 atatcgtttg aatctttttt caatctcatc atttttgcct gcaaggattc gttctatttc
     6661 ttgatgatgt ctgtttctga tgtgttcggt catctctttg aaatcttcat tctgagaata
     6721 gacattaatt attggatcta gcattttgta atattcgaca accttatttc gaaattcttc
     6781 attggttggt cttcttatct tgtttaccct gaaccagacg gttgcccaac ttgcgcctat
     6841 aacatgcggc agtaaatcaa aagcacgatc aatctcaaag ccttcgtcgt ctctcatttt
     6901 tcactaaggg cttttgcagc aatctttgag aaatatgtta ctatcatgtc ggctccagcc
     6961 cgcttgattg cagttagaat ctctaatgtc acttcttttt cgtctatcca accttgcatt
     7021 gcagcagctt ttaccaaagc atactctcca gatacactat atgcagaaat gggtacgtta
     7081 aatctctcgc gagtcatagc aatcaagtca agatatgcca atgcgggttt tatcatgaca
     7141 atatccactc cttctgcaat atcggtctct acttcacgca tagcctcttt tgggtttgtg
     7201 tatggaagct ggtaggtctt tctatctcca aatgttggag cagaatgagc catatccttg
     7261 aaaggagaat aaagtgaaga tctgtgtttt gcagagtgag acattattgc gacatccgta
     7321 aaacctgcat tatcaagtgc atgtctaatt gccttgacct ggccatccat cattgcagaa
     7381 ggtgacacta catctgcacc agcttgggct tggctaacgg ctattttccc caaggtttca
     7441 agactagagt cattgtcaat ctggttccct ttgaccagtc cacaatgtcc tgcagaggta
     7501 tactgacata aacaaacatc agacattatt gcaatatcat taccaagatt tttcctaata
     7561 tcagaaattg ttttttgcac tattccatca tttgaaaaag ctgaagtacc tttttcatcc
     7621 ttgtttgatg gaattccaaa gatcatgact gctggtattt ttagttctgc aatggaattt
     7681 acctcgttga caacatcact taatgtaagc ctctcaaaac cgggcattga ttctccttga
     7741 attttggatt ttagatcttc ttggacaaat attggacaga ttaaatcctt tggtgatagt
     7801 cttacctctt cgagtagttc acgaattttg tttgtttttc gtagtcggcg aagtctaagg
     7861 ttaggatagg acattattga aataagaatt ttctagcaat ataatttgtt actctttggt
     7921 tttataatca aatagcttca taacagttcg gagaatttcc gaatcacctt gttcagatgc
     7981 ctttctcaga ttgttcatag gagtagatat gatgtcttct actatagctt gtgtgagctg
     8041 gtcaattatt cgtattttct gctcatctgt ttcaccaagc atttgtagcg ctttttttag
     8101 ttcttttata cgtgcactat caatctcttt gaagacattc tttactatag gttctacttc
     8161 caatctcttc atcgctgctt ccactacggg gagctcctca ttaattattt tctctgctga
     8221 agacacaact cccattcttg ttctcatgtt tttatcaacc atttcagcaa tttgatccag
     8281 attcatcatt tttattttct tgattgttgc tactttttca tcgacggtcc tagggtttga
     8341 aagatccatt atcagcatgc cattttttct atactccatt gcttcattta ctctgtcata
     8401 tgttaccaag aaataaggag caattgttgc aacaaaaagc acgtcaactg ttttgaagtt
     8461 tacaatcgca tcttcaaatt taacaggtct tccccccgag gtctctacaa atgatttgga
     8521 gcgctcaaag gtcctactcg ttacaataaa atcaatacct cttttcttaa gcgattttgc
     8581 cacaagactt gcagcctctc ctgtcccaat caaaagaatg tgttttgatt ttagatcatc
     8641 aatgttttct tccgctagtt ttactgccat agaaccaatt gatatactcc cacggccaat
     8701 cccagtagct tgccttactc ttgttccaac acggattgct ttatcaaata gagtattcag
     8761 atttgttcct gatgccttca attcacgcgc ttcactaatc gattctttta cctgaccaag
     8821 tatttgttct tcacctacaa caagagaatc aagacccgag gttagcttta gaagatgctg
     8881 ataggcttcc gttccttgac ttatctcaag attttccttg aaggcattct cttcaagacc
     8941 agataccgac gcccatgttt ttttgatcct ttcaatatct gcatcatcac cacatccaaa
     9001 taattctacc ctgttgcaag tttgtaataa aacacattct ttgagtccag agtgcttaat
     9061 gaaagagtcg tatgcggaat tgatatctcg aaatgtaaac ctttcaagca tgtgaattgg
     9121 cgatttccta aaagttattc ttgcattgat tatactattt ggcatagtca cctaacatct
     9181 cgatcactct tttctgtgct ttttttaaat ttccgtcagc tattaattgt ttaacatgat
     9241 tgtcattcat gacactatag aggaattttt tgcgttgagg aaacgtatct agtctagttt
     9301 ttgcctgcct tcgtgcaaag tcttgtagtt tgatttgata gatatcctcc tttttgatta
     9361 gttttttgaa tactttttca gcctgtatgc gtaattgtct tgccattgct gggcttcgtc
     9421 cacctgtcga gactgcgatc tgaactgtat cttgtatatt tatgacagaa ccaaaggcaa
     9481 agtcagatac ttctgggtca tctgcagcat aagcatagca tcgcattttt tttgcttggt
     9541 caacaatctt tcggttcaga ttacgatcgt cagttgttgc gagcaccatg aatggtttgt
     9601 attttttcaa aaagtctgca ttttgtagtt taattttttt aaactctatc tttttttgtt
     9661 ttacatattt ttcaatctct ctattagttg aatcacttat gacaagaatc ttgcaatctt
     9721 gagtcagtaa tgcattgacc tttttgagtc cctcatttcc tcctcctaca acaattgcta
     9781 ggtttccttt cagattgagg tctacaatca atggatctcg ctgtctttgt ttgatattta
     9841 tagattccat ggaaatttag gtaacatttt taatcgcaaa caggatcgtt tttggtatca
     9901 atggacaatc tagacaagga gattctaaac gagattcaat ggacatttcc tcttgttcca
     9961 aaaccatact ctgagattgc caaaaagttt tcaatcacag atgatgagat gatgcagaga
    10021 ttacgtacac taaaacaagc cggaataatc agacaacttt ctgcaatatt tgacactaga
    10081 agactaggat acaagagtgc acttgttgca atggcaattt ctcctgacaa acttgatcaa
    10141 attgcaaatc aaattaacag acatcctggt gtaagccaca attacgaaag aaatcacgaa
    10201 tacaatctat ggtttacttt ggctgtcccg cctggatctg atcttaaaac cgagattgac
    10261 aagttttcaa aattacaagg catcaacaaa gttagaatgc ttcctacaat aaagctcttc
    10321 aagattggtg taaaattaga gatggtagaa gacaaaaaag ccgaagtaaa accaaccgag
    10381 gagaagaaaa agattcgtga tgtaaaattt gttgcaactg atgatgacaa gaattacatc
    10441 cgcgagttac aaaaagatct tgagataacc gaaagaccat tcttaaaggc agctcaaaga
    10501 cttggcatta ccgaagaaga actttttgaa aaggcaagat attacgaaga gattggagtt
    10561 atgcgaagat ttgcagccat cttacgtcat agagaggtag gatttttagc aaatgggatg
    10621 atagtgtgga aggtccccga agaaaggata gaggaggtag gtgctaagct aggtgcattc
    10681 ccgcaagtaa gccattgcta tcagagacct gtatacccag attggcccta caacgtattt
    10741 tcaatggtcc actgtaaatc aaatgatgat gcccaagtaa ttgcaaaaca gattgaagac
    10801 cagattagtg tccatgatta taagatatta tttagttcgc gtgagttcaa gaagacacgg
    10861 gttgaatatt tcgtcgaaca tgactttaag atagaagaac caattactgt gtgactgtaa
    10921 gaccagatta tgctgtttgg acagatgctt taatttcgta agatggccat tgattgaata
    10981 gttcgattac ttgtttttta tcagaatcat tcaagtattt gccgtctgtc atctgtgaga
    11041 acattgatac ctcttcctct gatactaccg ttggtagaac tgaagatact cccctatgag
    11101 acagaatata ctttattgca agttcggtta tgttgagacc atttcgcttt gcaattggca
    11161 ttagttgctc gactttttgt aacgattgtt ttacccaatc accacttctt actgaacgat
    11221 ggtctttttc acttattttt gtgtcagcgg ttacctttcc agtaaggatc cccgaggcat
    11281 caggtactct tactagtatc cctacgttat gcttttcacc ttgttcgatc agtatgtttc
    11341 caggatgctg ttctagaata ttatataccg tctgaactgc ggttgcgttt gtcttctcca
    11401 ttgcttccaa tccctcttct gtccatccta tcgcaggacc aagtgcaact tgatagctct
    11461 taattttacc ctctcttact tttttatcga gatattcaat tacctttttg tctctaattg
    11521 tctggatctt ggggttgtga aggccataaa catcgacgta gtcagtttgt agtcgttcta
    11581 gacttttttg taatgcaaat tcggtaaatt ctggtgtaaa cttttggggt agctccttgt
    11641 ggcctatctg ttcatttcca taaatgtcat aaccatattt tgttgatatt actacatcat
    11701 ttctcatacc agcaaatacc tcgcctatca gtttctcgct tttacctcta ccatagatat
    11761 ctccagtctc aaaataatta atccccaagt catatgcacg tttgagtaat ttctttgcct
    11821 catcatcttc gatttttttg ccccaccagt caagacccag agtccatgct ccaaatccta
    11881 tctctgaaac tttaattcca ctttttccta gtgttctgta tttcaattta ctattctcct
    11941 aaattctgat aatttttgtt gaagctctgc ctcactcaaa actggttttc cagtttctat
    12001 atttacattt aattctatcc aagatttgca tccctgataa tcaggtaaaa caggaatctc
    12061 cgttgaggaa attgtaaaga ccttaagaaa gacagccttc atcggttttt ctggcatcca
    12121 gttcatcctt tctaccatgt agttgtcgct ccagatgtga aatggagaga gttcttctat
    12181 cttttccatt gatgtcatat ctttctcctc gattacttct gcaatagatg tgattctgtt
    12241 atagccgttc tttggcatgt tctctcttgc atctgcaaga tacacaaagt attgggattt
    12301 tagcgatgca ttttcctgat gttcgtatgt gggaaataag gcaaattttt ttgcttcaag
    12361 gttaaagcca gatgctgttt caagaattcc tccctttcta agcaaaactg tttgatttcc
    12421 gttttcaagt gctttgacta cggttgccca ttcctttagg gccttcatta tcccaagctc
    12481 c
//
LOCUS       DASPUS010000042         2609 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_707956, whole genome shotgun sequence.
ACCESSION   DASPUS010000042 DASPUS010000000
VERSION     DASPUS010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2609)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2609
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_707956"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..274
                     /locus_tag="VEJ68_01000"
     CDS             <1..274
                     /locus_tag="VEJ68_01000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="methylase"
                     /protein_id="HXX05378.1"
                     /translation="KKGGRFVIVDLGKPDNPLIRAGVTFYLRLIMPILAMIGGGKLGL
                     KFGTLYGTYKLWPQNKKLESLLLEKFTKVEFEKGMMGGAIMVAAYK"
     gene            314..667
                     /locus_tag="VEJ68_01005"
     CDS             314..667
                     /locus_tag="VEJ68_01005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocase"
                     /protein_id="HXX05379.1"
                     /translation="MHDFALTIMGNDWIVIAFVALIMLLGTKRFPGASRRIGQIMGEV
                     NKTKNIVQNEYQKAKGELSMPVQGPVTTEREKLELMSKTLGIDHSNKTDDELRNLIAS
                     KLGNQSQGSEPTSSS"
     gene            736..1530
                     /locus_tag="VEJ68_01010"
     CDS             736..1530
                     /locus_tag="VEJ68_01010"
                     /inference="COORDINATES: protein motif:HMM:NF015763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05380.1"
                     /translation="MVDLWVFLVVSIPTMIFLGMRHALDVDHITAIDNLVRLHNAVKK
                     SRWIGTGFSIGHMASVLAEMILIIYVIGGITSVHNLAFWGGIIGVIALGAIGTINIYS
                     MKKWGKSGSAILASKILNKTGIFGSFGSALVTGLVFGLGFDTATQISAITLSVVASAT
                     TGVQTALILAGFFALGMIPTDTFDSILLRSAFSRILKAKGFRYMSYALSGSALFIASI
                     TSYEIMTNSEILPKLTGAILAVAIVSISFAYVFATRKKEYPINHES"
     gene            1661..>2609
                     /locus_tag="VEJ68_01015"
     CDS             1661..>2609
                     /locus_tag="VEJ68_01015"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008296737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HXX05381.1"
                     /translation="MTKIDPWQNALKQLASAAKILKLDPGIHEMLATPKKVLTVSIPV
                     KMDDGRIKVFTGYRSQHNDFRGPHKGGIRYHPDVTIEEVKALSMWMTWKCAIVDVPFG
                     GGKGGIICDPKRLSAGEKERMTRRYAYAISEIIGPGKDVPAPDVYTTGKEMAQIMDVF
                     SVMHGQGEPAVITGKPLSVGGSQARNVATGLGVAYCVREAAKKVGLRLKGAKVVIQGY
                     GNAGTFAAEYLEKLGAKVIGVSDSKGSIVNPKGLDSKKVLDYKNKHGSVVGYPGSKKV
                     TTEQLLTTPCDVLVPAALENQITPQIANKIHCKIIAEAAN"
BASE COUNT          892 a          437 c          545 g          735 t
ORIGIN      
        1 aaaaaaaggt ggtagattcg tgattgtaga tcttggaaaa cctgacaacc cattaatcag
       61 ggccggagtg acattttacc tcaggttaat catgcccatt cttgctatga ttggtggcgg
      121 aaaacttggt ctaaagtttg ggacacttta tggaacatac aagctttggc cacaaaataa
      181 gaaactagaa tctctacttc ttgagaaatt taccaaggtt gaatttgaaa agggaatgat
      241 gggaggagcc ataatggtgg ctgcctacaa gtaatgtcta aagctttaat ttcggaaatt
      301 tgctattcat tccatgcatg attttgccct tacaataatg ggaaatgact ggatagtcat
      361 cgcatttgtt gcattgataa tgttattggg aacaaaacgt ttcccaggcg catcaagaag
      421 gatagggcaa ataatgggag aagtcaacaa gacaaagaac attgttcaaa atgagtacca
      481 aaaagcaaaa ggagaactca gcatgccggt acaaggtcca gtaactactg aaagggagaa
      541 acttgagctc atgtcaaaga cacttggaat agaccattca aacaaaaccg atgatgagct
      601 aagaaatctt attgcatcaa aactaggaaa tcaaagtcaa ggttcagaac caacttcaag
      661 ttcgtaaccg atataatctc aacttgggac aaaatataat agaaaaattg attaagttag
      721 caatagagaa aaagcatggt tgacctttgg gtttttcttg tcgtatcaat accaacaatg
      781 atctttcttg gtatgcgaca cgccttagat gttgatcata taactgcaat agacaatctt
      841 gtacgactac ataatgctgt aaaaaaatct agatggattg gaactggctt cagtattggt
      901 cacatggcat ctgttcttgc tgagatgatt ctcataatct atgtcattgg aggaattaca
      961 agtgtacaca atcttgcatt ttggggtgga ataataggcg ttattgctct tggtgcaatc
     1021 ggtacaatca atatctattc aatgaaaaaa tggggaaaaa gcggttcggc tatacttgca
     1081 agtaaaattc ttaacaaaac tggcatcttt ggatcttttg gttctgcatt agtgactgga
     1141 ttggtattcg gtttaggatt tgatactgca actcaaattt ctgcaattac tttatctgtt
     1201 gttgcatctg ctacaactgg cgttcagact gccttgattt tagcaggatt ctttgcttta
     1261 ggtatgattc ctacggatac gttcgatagt attctacttc gttccgcatt ttctaggata
     1321 cttaaagcaa aaggtttccg atacatgtct tatgctttga gtggatctgc tttgtttatt
     1381 gcatcaatta catcctatga gataatgaca aattcggaaa tattaccaaa acttacaggt
     1441 gctattttgg cagtagcgat agtttcaata tcttttgcat atgtatttgc aactagaaaa
     1501 aaagaatatc ctataaatca cgaaagttag ttccaataag atcctaatag aaccaatatc
     1561 aacagcagat agttaactgc tggaataaac atctttaaaa ttaacagtac ttgctctcaa
     1621 caaatttaaa tacaatatat agtgagacat atcgttaaga ttgactaaaa tcgatccatg
     1681 gcagaatgca ctcaagcaac ttgcaagtgc tgcaaaaatt ttgaaacttg atcctggcat
     1741 tcacgagatg cttgcaactc ctaaaaaagt tctaacagtt tctattccag taaaaatgga
     1801 cgatggaaga atcaaagttt tcacaggata tagatcacaa cataatgatt ttcgtggtcc
     1861 acataaaggt ggaatcagat atcaccccga tgtaacaatt gaagaggtaa aagcactctc
     1921 aatgtggatg acatggaagt gtgcaatagt tgatgttcca tttggtggag gaaaaggagg
     1981 aataatttgt gatccgaaaa gactctcagc tggtgaaaaa gaaagaatga ctcgtagata
     2041 tgcatatgca atctctgaga taattggacc tggaaaagat gtcccagctc ctgatgttta
     2101 tactacagga aaagagatgg cgcagataat ggatgttttt agtgtaatgc atggacaagg
     2161 cgaaccagct gtaatcactg gcaagccatt atcagtagga ggctctcaag caagaaatgt
     2221 tgcaacaggt cttggagttg catattgtgt aagagaagct gcaaaaaaag taggactcag
     2281 actaaaaggt gccaaagtgg taatacaagg ttatggtaat gctggaacat ttgctgctga
     2341 atatctagaa aagctgggtg caaaagtaat cggtgtaagt gattctaaag gttctatagt
     2401 aaatccaaaa ggacttgatt caaagaaagt tctcgactac aagaacaaac acggaagcgt
     2461 agttgggtat cctggaagca agaaggtcac aacagaacaa cttctcacta caccatgtga
     2521 tgtactagta ccagctgcac ttgagaacca aatcacgcca cagattgcaa ataagattca
     2581 ttgtaagata attgcagagg ctgcaaatg
//
LOCUS       DASPUS010000043         3786 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1531166, whole genome shotgun sequence.
ACCESSION   DASPUS010000043 DASPUS010000000
VERSION     DASPUS010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3786)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3786
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1531166"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            101..544
                     /locus_tag="VEJ68_01020"
     CDS             101..544
                     /locus_tag="VEJ68_01020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05382.1"
                     /translation="MNPPFSTDAVKIGDYEVQISTTPTTPDVGKDTKIHFRVVDQDGN
                     QVDKFRMGLKIYFNDQLEQSFQPDYYPGTWNLDYIFQESGNHVLRADLYDLKTGDVNS
                     YIFNIPTLNLYDSIFSVLVLVGAAGAGGIVLAIIIFQKRVKPKYR"
     gene            complement(853..1308)
                     /gene="msrA"
                     /locus_tag="VEJ68_01025"
     CDS             complement(853..1308)
                     /gene="msrA"
                     /locus_tag="VEJ68_01025"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010195211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HXX05383.1"
                     /translation="MKATFGAGCFWCVEHDFTKIKGVKSTTVGYMGGHLKDPTYEDVC
                     TDDTGHAEVVQVEYDPSQISYNQILDVFWNCHDPTTLNRQGPDIGTQYRSVIFYHNQE
                     QEREARKSKDELQNSGKYKNKIVTEVAPASEYYVAESYHQKYYQKCGIV"
     gene            complement(1341..2555)
                     /locus_tag="VEJ68_01030"
     CDS             complement(1341..2555)
                     /locus_tag="VEJ68_01030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05384.1"
                     /translation="MKLLVIIILLLPMSLCFAQIPPAPGAVITFYITDENLVTDHRGV
                     MELSTAGLVDFTIDGTPIPGPSSMVETGIDTGVFQLQLTLPDSVNGQPLQNGDVVLMT
                     YHQSADYSGHPQTITQSVVLSNVPAGPIQSSQQNVRIGRYFTLVINAPNYNLDSQTPD
                     DIPLSQVEVHMGGVGTTLANSAFVTNTGSLRETGSDTGIFQTTFKIPSFIDGYPVLIG
                     STLEFRFNDNSEPVPSTSSVFVLVGGADSSVTLTPITPGPPPPNFTVQTINPMGSIVN
                     YLNSTALQGLVSPNCYPASGSFFPMGTTTVTCAANNQFGNSILKSFSVSVIQKQNYIP
                     NWVKNIASFWCSNSISDDDFKTALKYLISNKIVYLSQSQIGTLDKSNACLWSNGTISD
                     DEVASLFYHLVQ"
     gene            complement(2628..3080)
                     /locus_tag="VEJ68_01035"
     CDS             complement(2628..3080)
                     /locus_tag="VEJ68_01035"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HXX05385.1"
                     /translation="MMRKIDLETTLGTTIFLTAKSLERASEYRIKEKLGLTPSQWKII
                     LTLSFFNGISQKELAGKIYVDASTLVPVIDKMEIGGLVERKPDPNDRRNNLVFLTKKS
                     ESAVDSIIKILLQLIKEFYKGISQKEQDNIQILLKKIMDNADNTLNKK"
     gene            3155..>3786
                     /locus_tag="VEJ68_01040"
     CDS             3155..>3786
                     /locus_tag="VEJ68_01040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05386.1"
                     /translation="MSIVRRHMRHIALATLAILSISIPGANMSAFALTSSSEFESHTL
                     TGDDLKNNPMAAKILAEIEFSKKQVAQLEQDQKNKDLNAQLIEQQRSIAKQLEDQAYQ
                     MLQLQSESTNPQNAFNKFVATIPNDSVKQVFVGEFDFMQKRVNAGNIAMKQVLDNGGS
                     WDEAMQAFSQQAGIKRTEMVSVNRDLNVQYGLADPTIQASFDKNGMLPDD"
BASE COUNT         1246 a          675 c          682 g         1183 t
ORIGIN      
        1 aataatatag taaaactaca cataaaactt gatgagaaaa aaattcatct tactaccaat
       61 ttattttggt ttttttctaa tcctagtcac atatgagata ttgaatccac catttagtac
      121 tgacgcagtg aaaattggag attacgaggt tcagatctct accacaccca caacaccgga
      181 tgtaggaaag gatacaaaaa ttcattttcg tgttgtggat caggacggca accaagttga
      241 caaatttaga atgggactta aaatttactt caatgatcaa ttagagcagt catttcaacc
      301 agattactac cctggcacat ggaatcttga ttacatcttt caagagtctg gaaatcatgt
      361 gctaagagca gatctttacg atctaaaaac tggtgatgtg aattcatata tttttaatat
      421 acctacacta aatctttatg attcaatctt ttctgtcttg gttctagtcg gcgccgcagg
      481 agctggagga atagttttgg caataataat ttttcaaaag agagtaaaac caaagtatcg
      541 ataattgtaa tattctaatt ttattcaagc atattccaaa atcgggtgta tcgaaagaga
      601 ccaacccacc cagaaatgaa tgaaatcata gacaaggcaa aaaggaagta aagatctctt
      661 ttacgatgtg caagatctaa atttagaaag ataaatgcac ccaatccgat aaggctaaaa
      721 aacaaaatca gtctgccaag tcgcttccaa ttcaattatg gaacgattcg atacatcaga
      781 tataaaatag atctttaaat cctaatcaat ttactatgaa agaaattatt ctaaaagtat
      841 agttaaagga agttatacaa taccacattt ttggtagtat ttttgatggt aactctctgc
      901 aacataatat tctgatgccg gagcaacctc agtgactatt ttattcttgt atttccctga
      961 attttgaagt tcatctttag attttcttgc ttctcgttct tgttcttgat tatgataaaa
     1021 aatcactgat ctatactgag taccaatatc agggccttgt ctattcagtg tggtgggatc
     1081 gtgacaattc caaaaaacgt ctaaaatctg attatacgaa atctgagacg ggtcatattc
     1141 aacttgaaca acttcagcat gccctgtatc atctgtacag acatcctcgt aggtgggatc
     1201 tttgagatgc cctcccatgt atccaactgt agttgatttt acacccttta ttttggtaaa
     1261 atcgtgctca acacaccaaa aacacccagc tccaaaggtt gccttcataa gatacgtatt
     1321 cgcaaaccca aaattaaatc ctattgtaca agatgataaa acaagcttgc gacttcatca
     1381 tctgaaattg taccgttgga ccagagacaa gcattggatt tatccaaagt accaatttgt
     1441 gattgtgata gataaactat tttgtttgaa atcaaatact ttagcgcggt tttaaaatca
     1501 tcatcactta tactgttact gcaccaaaag cttgcgatgt tttttaccca gtttggaata
     1561 taattttgct tttgtattac agaaactgag aatgatttta gtatagagtt tccgaactgg
     1621 ttatttgcag cacaagttac tgttgttgta cccataggaa agaaggaacc agatgcaggg
     1681 taacaattgg gtgagaccaa accttgcagt gcagtcgaat taagataatt cacaatactt
     1741 cccattgggt ttattgtctg gactgtaaaa tttggtggag gtggacccgg agttattggt
     1801 gtaagagtga ctgaagaatc tgcgccacca actaggacga acacgctaga tgtagatgga
     1861 actggttcag agttatcatt aaacctaaat tctaaagtag aaccaattag aactggatag
     1921 ccatcaataa aagatggaat cttaaatgtt gtttggaaaa ttccagtatc agaacctgtt
     1981 tctctcaacg aaccagtatt tgtcacaaat gccgaattgg caagtgtagt accaactcca
     2041 cccatatgta cctctacttg gcttaatgga atatcatctg gagtctgtga atctagatta
     2101 taatttggag cattaattac aagtgtaaag tatctcccaa ttcttacatt ttgttgagaa
     2161 gattgaattg gaccggcagg aacgttactg agaacaacag attgagttat cgtttgtgga
     2221 tgtccagaat aatccgcact ttgatgatat gtcataagaa caacatctcc attttgtaat
     2281 ggttgaccgt taacagaatc aggaagtgta agctgcaatt gaaaaacacc tgtatcaatt
     2341 ccagtttcaa ccattgaaga gggacctgga attggtgtgc cgtcaatagt aaaatcaacc
     2401 aaaccagcgg tagaaagctc catcactcct ctatgatctg taaccaaatt ttcgtctgta
     2461 atgtaaaatg tgattactgc acccggagca ggaggaattt gtgcaaaaca gagcgacatg
     2521 ggcaataaga gaattattat aactagtaat ttcatgtctt tacgtaatcc tgctgcatag
     2581 tccagatgta taatttaggc atttatgata ttgtattact ttggaattca ttttttattc
     2641 aaagtattat cagcgttatc cataattttt tttaaaagta tttgaatatt atcctgttcc
     2701 ttttgagata tgcctttgta gaattctttt attagttgaa gcagtatctt aattattgaa
     2761 tcaactgcag attcagattt ttttgtgaga aataccaagt tattccttct atcatttggg
     2821 tctggttttc gttcaaccaa accaccaatt tccatcttat ctatcactgg aacaagagta
     2881 cttgcatcta catagatctt gccagcgagt tccttctgac taatcccatt aaagaaactc
     2941 aaagtcaaga tgatcttcca ttgtgaagga gtcaatccca gtttttcctt tattctgtat
     3001 tctgatgccc tttctagtga ctttgcagta agaaagatgg tcgttccaag tgtggtttcg
     3061 agatctattt ttcgcatcat attacatcat aattggtggt atacaaatga ttggtacacc
     3121 aatagttata tactattggg taaattgtat ttatatgagc atcgtacggc gccatatgag
     3181 acatattgca ctagccacct tggcaatatt atctatctcc atacctggtg ctaatatgtc
     3241 agcatttgcc ttaacttctt ctagtgaatt tgaatctcat acattgactg gtgatgatct
     3301 taagaacaac cccatggcag caaaaattct tgctgaaatc gaattttcaa agaaacaagt
     3361 ggctcaactc gagcaagatc agaagaataa agaccttaat gcacaattaa ttgagcaaca
     3421 aaggagtatt gcaaagcagt tagaagacca ggcatatcaa atgttacagc tgcaatcaga
     3481 aagcacaaat ccacaaaatg catttaataa atttgtagcc acgataccaa atgacagtgt
     3541 aaaacaagtt tttgttggtg aatttgattt tatgcaaaaa agagtcaatg ctggaaatat
     3601 tgctatgaaa caggttttag acaacggcgg ctcatgggat gaagcaatgc aagccttttc
     3661 ccaacaagct ggaataaaga ggaccgagat ggtgtctgtt aatagagatc ttaatgtaca
     3721 atatggttta gcagatccta ccatacaagc aagttttgat aaaaatggca tgctgcctga
     3781 tgatta
//
LOCUS       DASPUS010000044         2036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1805394, whole genome shotgun sequence.
ACCESSION   DASPUS010000044 DASPUS010000000
VERSION     DASPUS010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1805394"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..985)
                     /locus_tag="VEJ68_01045"
     CDS             complement(<1..985)
                     /locus_tag="VEJ68_01045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05387.1"
                     /translation="MVLKPVPMTRIAVLGLRKDRQTVVSILHDLNAVQLESLSKDVST
                     LLRNERDNDLYRQVSDQLLRMKALKTVLPPIQVTQCQRFTSADKLLEAAKSIDIDSKV
                     ASLEREKETLLTQLKETDNNIRLVDEFSFFPEDFNVLQLSTAHSYFGRVNPKDFSGFK
                     NALDVNSQDVFLHSKEGKDTTQIILITFPNFPPHALATVVQEYNVKLEPVPKLQGKVA
                     ELGQNLKKKQDEINQKLGNIDKQLVEISKTHYVNIVCLEEQLEIENRKLEIVDNLGVT
                     SDSFALEGWIPKSKVNQLKTGFEQHVKGTLLFELETDENPPTLFNNPKRFRL"
     gene            complement(988..1311)
                     /locus_tag="VEJ68_01050"
     CDS             complement(988..1311)
                     /locus_tag="VEJ68_01050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05388.1"
                     /translation="MSTTEKYVHSIKQIKEGEDRAQKEIDEQKKRVSEEFRNFESYVT
                     KTVANTKTDGEKLVESNVEQSRKKASIETEKIIEDANNKSKTVSARIDAQTVREIIDI
                     LLKEV"
     gene            complement(1431..>2036)
                     /locus_tag="VEJ68_01055"
     CDS             complement(1431..>2036)
                     /locus_tag="VEJ68_01055"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016471 - vacuolar proton-transporting
                     V-type ATPase complex [Evidence IEA];
                     GO_function: GO:0008553 - P-type proton-exporting
                     transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="V-type ATP synthase subunit D"
                     /protein_id="HXX05389.1"
                     /translation="KIAQKGLKLLKLKRQALILEFFNTSKTAASLRGALQTELIKGYQ
                     SIRMAEMLAGSMRLENEAMKIPQLNKLQITPKNVMGVRIPKIGGGQSDHALIEHLLEL
                     PPSINEAIKAYQNVHKMVLEVAEKETALRKLLLEIEKTKRKSNAIENVFIPRLQAAVK
                     FITFRLDEMERDTFIMLKTVKRKMGEREQEAQLKKEKEIIV"
BASE COUNT          532 a          368 c          334 g          802 t
ORIGIN      
        1 atagcctaaa tctttttgga ttattaaata gcgttggagg attttcatct gtttccagct
       61 caaacaacaa ggttcccttc acatgttgtt caaaaccggt cttaagctga tttacctttg
      121 atttcggaat ccatccttcc aatgcaaacg agtccgaggt aacaccaagg ttgtccacaa
      181 tctctaactt tctgttttca atttccaact gttcttctag gcaaacaata tttacataat
      241 gagtttttga gatctctacg agttgtttat ctatattacc aagtttttga ttaatttcat
      301 cttgtttttt cttcaaattc tgaccaagtt ctgctacttt tccttgtagt tttggaacag
      361 gttcaagttt gacattatat tcttgaacta cagttgctag tgcatgtgga ggaaaatttg
      421 gaaaagtaat caagataatt tgtgtagtat cttttccttc ctttgagtga agaaatacat
      481 cttgactgtt aacatctaat gcatttttaa aacctgaaaa atcttttgga ttaactctac
      541 caaaataaga gtgagcggtt gacaattgta gaacattgaa atcctcaggg aaaaatgaaa
      601 attcgtctac cagcctgata ttgttatcag tctctttgag ttgtgtcaag agagtttcct
      661 tttcccgttc taatgaggca actttgctat ctatatcgat agatttagca gcctccaaca
      721 atttatctgc agatgtaaat cgttgacatt gtgtgacctg gattggaggt aagacggttt
      781 tgagtgcctt cattcttaaa agttgatcag aaacttgtct gtaaagatca ttgtctcgtt
      841 catttcgtag tagagttgaa acatcttttg aaagagattc tagttgaaca gcgttaagat
      901 catgaagaat tgatactact gtttgtctat ctttgcgcaa tcctaacacg gcaattcgtg
      961 tcattggtac tggttttaga accaattcta tacctctttt aataaaatat cgattatttc
     1021 tcgtactgtt tgtgcatcaa ttctggcaga aactgttttt gatttgttat tagcatcttc
     1081 aataattttt tctgtttcaa tacttgcctt ctttcttgac tgctcaacat ttgattctac
     1141 cagcttttcg ccatcagtct ttgtattagc aactgttttt gttacataac tttcaaaatt
     1201 tcgaaattct tctgaaaccc ttttcttttg ttcgtcaatt tccttttgtg cgcgatcttc
     1261 accttcttta atttgtttga tagaatgaac atatttttct gtagttgaca ttttaaactc
     1321 ctagaaagtg cctgcttgca tataacgcaa gagcaatagt tccaaaaata tttccatatt
     1381 tgaaagccct catgatcata tagaattttt tttgttgtat atttttaaag ttagacaatg
     1441 atctctttct cctttttgag ctgggcttcc tgttctcttt ctcccatttt gcgcttgaca
     1501 gtctttaaca ttatgaaagt atcacgttcc atctcatcta atctaaaagt aatgaattta
     1561 acagcagctt gtaatcttgg aatgaatacg ttttctattg cgttagattt gcgttttgtc
     1621 ttttctattt ccaataagag cttgcgtagt gcagtctctt tctctgctac ctcaagaacc
     1681 atcttgtgta cgttttggta tgctttgatt gcttcgttaa ttgatggtgg cagttctagt
     1741 aaatgttcta ttagtgcatg atcactctga ccacctccaa tttttggaat tctaactccc
     1801 attacgtttt ttggggtgat ttgtaatttg ttaagctgtg gaattttcat tgcttcattt
     1861 tctaatcgca ttgagccagc caacatctca gccattctga tgctttgata acctttgatg
     1921 agttctgttt gtaatgctcc tcttaaagat gcagcagttt tgcttgtatt aaaaaattct
     1981 aaaattagag cttgtctttt tagttttaat aacttgagtc ccttttgtgc gatttt
//
LOCUS       DASPUS010000045         2084 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1531867, whole genome shotgun sequence.
ACCESSION   DASPUS010000045 DASPUS010000000
VERSION     DASPUS010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2084)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1531867"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            233..>2084
                     /locus_tag="VEJ68_01060"
     CDS             233..>2084
                     /locus_tag="VEJ68_01060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HXX05390.1"
                     /translation="MARDPICGMFVEEKTQSLNYETDGIKYFFCCKSCLDEFAAPEKE
                     LRKLKRYVVLGVALTIPIVLLTYISILPHQINGYVLFALATPVQFWLGWRFYQGTFDA
                     FKHKMTNMDVLIAIGTSTAWGYSTVVTFAHNILPFGDLYFETSSIIITLLLIGRLLES
                     RTKTRASKAVKKLLDLKPTIAHIIKDGKETEEPVEKVQLNDIILVRPGEKIPVDGIII
                     DGSSSVDQSAITGESIPVEKESGDEVIGGTINKEGAFKFKTTKIGDDSVLSQIVKLVE
                     EAKSSKVPIQKLADKISSYFVPAIIIIGLISALGWFFFGGIGLTFSLLAFVSVVIISC
                     PCALGIATPAALMVGAGKAAENGILIKGGENLEIARKVQVVVLDKTGTLTKGIPSVTD
                     VFSVNGMDENEILRLAAISEKNSEHPLAKAIVRYAKKIGIPISEPDSFKVFSGSGILS
                     QYGDHQILIGNRKFIIANGIIIDETLGKKMEELEGEGKTLVIVSIDKKLSGIIAMMDT
                     ISDYAQDAIQRLKKIGIQVVMLTGDNKRTANTIANKLGIDRVLAEVSPQEKENTIRKI
                     KDEGKIVAMVGDGINDAPALAAADLGISFGSGTDIAKETGGIILVKDDLCD"
BASE COUNT          713 a          346 c          446 g          579 t
ORIGIN      
        1 aaatcataaa cttattatca aacttgaaaa tctagaaaca gtctaattaa ctagcgatat
       61 tgagtataat tatggcaaaa tgtggctgcg gtgcagaaca caaatcacat tgcaaatgtg
      121 aaactactgg caagtgtgat tgtgggagta actgtacatg tgtggattgt agggatccaa
      181 gacatggaaa acatggttag ttcccctacc aattttttat agttgaacga aaatggcaag
      241 agatcccatc tgcggaatgt tcgtagagga aaaaactcaa tccctaaact acgaaacgga
      301 tggcatcaaa tacttttttt gttgcaagag ttgtcttgat gaatttgctg cacccgaaaa
      361 agagcttaga aaactaaaga ggtatgtagt tctaggcgtt gcactcacaa ttcccatagt
      421 tttgttaaca tatatttcta tattacctca ccagattaac ggatacgtac tttttgcttt
      481 agctacccca gttcagttct ggcttgggtg gagattctat caaggaacat ttgatgcatt
      541 caaacataag atgactaaca tggatgtctt gattgccata ggaacctcaa cagcatgggg
      601 ctacagtact gttgtaacat ttgcacataa tattttgcca ttcggagatc tttattttga
      661 aacttcttca ataataatta cgcttttgct aattggacga ttacttgaaa gtagaaccaa
      721 gaccagagcg tcaaaagctg tcaaaaagtt actagatctc aaacctacca ttgctcacat
      781 tatcaaagat ggtaaagaaa cagaagagcc agttgagaaa gtacaattaa acgatatcat
      841 tctagttcgc cctggagaaa aaattccagt tgacggaatc ataattgatg gaagctcctc
      901 tgtagaccaa tccgcgataa caggggagag cataccagtt gagaaagaat ctggcgatga
      961 agtgattggt ggtacgatca acaaggaagg tgcctttaaa ttcaaaacaa ccaagattgg
     1021 agatgactct gttttatcac aaatagtaaa acttgtcgag gaagcaaaat caagcaaggt
     1081 tccaattcaa aagcttgccg ataagatatc ctcttatttt gtacctgcaa ttattataat
     1141 tggattaatt tctgcactag gatggttctt ttttggagga attgggctca ccttctcact
     1201 tcttgctttt gtatctgtag tgataatttc ttgtccatgt gcattaggaa ttgctacacc
     1261 cgctgccttg atggtaggag ctggaaaagc agcagagaac ggaattttga taaagggagg
     1321 agagaacctt gagattgcac gaaaggttca ggttgtcgta ttggataaga caggtacgct
     1381 gacaaaagga attccttcag ttaccgatgt attttcggta aatgggatgg atgaaaacga
     1441 gatcttacgc ctagcagcaa tttcagaaaa aaattccgaa cacccgcttg caaaagctat
     1501 agttagatat gcgaaaaaaa taggaatacc tatttctgag ccggattctt tcaaagtatt
     1561 ttctggtagc ggcatactct cccaatacgg agatcatcag atattgatag gaaatagaaa
     1621 atttataatt gctaatggaa ttattattga cgaaacacta gggaaaaaga tggaggagct
     1681 tgaaggagag ggaaaaacgc tagtcattgt ttctatagat aaaaaattat caggaataat
     1741 tgcaatgatg gatacgatca gtgattatgc gcaagatgcc atacaaagac tcaaaaaaat
     1801 tggaattcag gtcgtaatgc ttactggtga caataaaaga acagctaata ccatagcaaa
     1861 caaacttggc atagatagag tacttgcgga agtatcgcct caagaaaagg aaaataccat
     1921 cagaaaaata aaggatgaag gcaaaattgt tgctatggta ggcgatggaa taaatgatgc
     1981 tccagcactt gctgcggcag atctaggaat ttcttttgga agtggaactg atattgcaaa
     2041 agagacaggt ggtatcatac ttgtcaaaga tgatctttgt gatg
//
LOCUS       DASPUS010000046         2462 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1531972, whole genome shotgun sequence.
ACCESSION   DASPUS010000046 DASPUS010000000
VERSION     DASPUS010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1531972"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(24..1373)
                     /locus_tag="VEJ68_01065"
     CDS             complement(24..1373)
                     /locus_tag="VEJ68_01065"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intradiol ring-cleavage dioxygenase"
                     /protein_id="HXX05391.1"
                     /translation="MIIVTMLANPYNWRISHLREMSQTIQSDRKTKVLSCLAAFTTTF
                     AGIIHLSLVHPTHSPLQEFGIFFLVSGIAQVFWIIPVIRDWHKAWHYIGIIGTAVLIA
                     IWSLSRFSTLITSRPFHVDQMGIIEESMQVAFIVLLAVILIFKSRTNKIDSDTPKKKN
                     KAGLLILAGIVVAIILVGLFVPIPFGQPMGPPPQSGGPPGQFGGPSGQFSGPPQFGSS
                     PQQSTTQTSATNMSCTLTPSLIEEESTPQQTEGPYFVDEMLDRSDIRSDPSDGTVQDG
                     VPLHLLIHVYTVNHGSCIPFTGAHVDIWHANSQGLYSDIAAINTLGKKYLRGYQVTDD
                     NGAVQFTTIYPGWYQGRALHIHIKVRTFDGTQKTSEWTSQFYFNDTITDQVHSQPPYN
                     NHGQRDTLNNEDSIYTGPSTDGMYQSNTGTHLMLNLTKDGQGYLGTFNVVVNTSQTR"
     gene            1557..1895
                     /locus_tag="VEJ68_01070"
     CDS             1557..1895
                     /locus_tag="VEJ68_01070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05392.1"
                     /translation="MTICDKFRQLFKRSGRSVDDMVNEMRKDIQNVRFSLDDFEEKYR
                     KWRDREIKKIPSLPEKEKKERIEIAQVLEEFNAEVLNLAQPIKRKFEIAKQYLKDYQD
                     ALRNSLNRSK"
     gene            complement(1966..>2462)
                     /locus_tag="VEJ68_01075"
     CDS             complement(1966..>2462)
                     /locus_tag="VEJ68_01075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05393.1"
                     /translation="ATTFPIYAQIESSPIQQQESPHGITMQFSYMPPIPAINGFTTFQ
                     FNVINSTTNQPLQNYTATVIVGNVAGFTGGSSYYNFSKIVVPNGNFSVNYAFPNDGTF
                     PINLRVDTANYIDVGRFQVIVPPPTNAISGGNLIYIGAGVAAAGAVAGVVIMLARKSS
                     NKKV"
BASE COUNT          751 a          446 c          500 g          765 t
ORIGIN      
        1 tggatttaga taatttagta atactatcta gtttgactgg tatttacaac tacattgaat
       61 gttccaaggt atccttgacc gtcttttgta aggtttagca tcagatgagt tcctgtattg
      121 ctttgataca tgccatcggt agaaggtcca gtatagatac tgtcttcatt gtttagagta
      181 tctctttgac catgattgtt gtatggaggt tgtgagtgta cctgatcagt tatagtatcg
      241 ttaaagtaga actgtgatgt ccactcggaa gtcttttgag ttccatcaaa ggtgcgaacc
      301 ttgatgtgaa tgtgtaaagc tcttccctga taccagccag gatagattgt ggtaaattga
      361 accgctccgt tatcatcagt cacttgatat ccacgtaggt atttctttcc tagggtgttt
      421 atagctgcaa tatcagaata cagtccctgt gaatttgcat gccagatgtc aacatgtgca
      481 ccagtaaatg gaatgcatga accatgattg actgtataaa cgtgaatcag cagatgtagt
      541 ggaactccgt cttgtactgt gccatcagat ggatctgacc taatgtcaga acggtcaagc
      601 atctcatcta caaagtatgg accctcggtc tgttgaggag tgctttcttc ttcgattaat
      661 gaaggcgtca atgtgcagct catgtttgta gcactggttt gagttgtaga ttgttgcgga
      721 gaagatccaa attgtggtgg accactaaat tgtcctgaag gacctccgaa ttgtcctggc
      781 ggtcctccag attgtggtgg aggccccatc ggctgaccaa atggtattgg tacaaacaat
      841 cctaccaaaa ttattgctac aactattcca gcaaggatca ataatccagc tttgttcttt
      901 ttctttggtg tatcagaatc aatcttattc gttctgcttt tgaaaattag gataacagct
      961 aatagtacaa taaaagcaac ttgcatcgac tcctcaatta ttcccatctg atctacatga
     1021 aaaggtctag acgttatgag agttgaaaat ctgctcagcg accatattgc aattagtact
     1081 gctgtaccaa taattccgat ataatgccat gccttatgcc aatctcttat tacaggaatt
     1141 atccagaaaa cctgagctat tcctgaaact aggaagaaga ttccaaattc ttgcagtgga
     1201 ctatgggttg gatgtactag tgagagatga attattccag caaaggtagt tgtaaaagct
     1261 gctaaacacg acaacacctt tgttttcctg tcactttgaa tagtctggct catctccctt
     1321 agatgactaa ttctccaatt atatggattt gctaacattg ttactataat cataagtaac
     1381 aatcttcttg actccagtta tgttaacaaa gcacaaattc attcacaaaa agtgggaaaa
     1441 ctgtttctac tttttttcta tgaactcatt tggtactaac tctagggttc agacctatga
     1501 agattcgagt cgttgggttt gtttaatatt aaatacatct catgtagaaa aaagccatga
     1561 caatatgcga caagttcaga caacttttca agcgttctgg caggagtgtt gacgatatgg
     1621 taaatgaaat gaggaaggat attcagaatg tgaggttttc attagatgat tttgaggaga
     1681 aatacagaaa gtggagagac cgagaaatca aaaaaatccc ttccttgcct gaaaaggaaa
     1741 aaaaggaaag aattgagata gctcaggttt tggaggaatt taacgcagag gtactcaatc
     1801 ttgcgcaacc cattaaaaga aaatttgaga ttgcgaaaca atatctgaaa gattatcaag
     1861 atgcacttag aaatagccta aatcgttcaa aataaatttc caacaaatca taactcttgg
     1921 gttcagacct gtgaggattc aaagtaaatt acatattaaa tctgttcaga cttttttatt
     1981 tgaagacttt cttgcaagca taatcacaac accagctaca gccccagctg ctgcaacacc
     2041 agctcctatg taaattagat tgcctcccga gattgcgttt gtgggaggtg gaacaatcac
     2101 ttgaaatctt ccaacatcaa tgtaattggc ggtatctaca cgcaaattga tgggaaaggt
     2161 tccatcattt ggaaatgcgt aatttacaga aaaatttcca tttggtacta cgatcttgct
     2221 aaaattatag taactactgc ctcctgtaaa tccagcaaca ttgcccacta ttacagtagc
     2281 agtgtagttt tgtagaggtt gattcgtggt agaatttatg acattaaact ggaacgtagt
     2341 aaaaccatta attgctggga ttggaggcat gtaactaaac tgcatagtta ttccatgagg
     2401 tgattcttgt tgttgtatgg gactcgattc aatctgggca taaattggaa atgtagttgc
     2461 tc
//
LOCUS       DASPUS010000047         2139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_163313, whole genome shotgun sequence.
ACCESSION   DASPUS010000047 DASPUS010000000
VERSION     DASPUS010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2139)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2139
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163313"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="VEJ68_01080"
     CDS             complement(<1..260)
                     /locus_tag="VEJ68_01080"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HXX05394.1"
                     /translation="MPCLVVVGGFFGDEGKGKIIAYLANKEKPFVAVRGGVGPNAGHT
                     FSHRGKTYKVRMLPSAALNRTTQLLIGAGVLINPEILFNEIK"
     gene            348..809
                     /locus_tag="VEJ68_01085"
     CDS             348..809
                     /locus_tag="VEJ68_01085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05395.1"
                     /translation="MTLDSAAAGNMVQILADLPDFLREQIIRKRLQEFVIFEESDKRE
                     TISMALNAASSIDEHKLTVLVKTWMDVLSKFDPSTIVLMLRLYCEEISKDQTAIEKLN
                     MDCLIRAFTTLDEVKKQKLIDCLKESMFSVPNRHKIIEIMPTAAIEILEMK"
     gene            complement(812..1072)
                     /locus_tag="VEJ68_01090"
     CDS             complement(812..1072)
                     /locus_tag="VEJ68_01090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(2+)-trafficking protein"
                     /protein_id="HXX05396.1"
                     /translation="MVKVCLKCHKDFDEKLVDDPGSEVYPSCPDCWKEWTNYAVMVMN
                     EMRLDMSLPEHRKALRKHEKMFFGLEKQEGELQKNPDKRPDQ"
     gene            complement(1350..1748)
                     /locus_tag="VEJ68_01095"
     CDS             complement(1350..1748)
                     /locus_tag="VEJ68_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05397.1"
                     /translation="MLNHKYKPKPEWEIQGFLCSSCHIEKTKEFILRQQDQKEKLKQA
                     GNICAVCKKELSLESDKNKARWQWNMEHNSILCKSCFEKKAQEYEKKLNYCILCNDRL
                     GFIRYNPKPKWNIEGQLCRKCWDKQREMRH"
BASE COUNT          633 a          429 c          366 g          711 t
ORIGIN      
        1 attttaattt cattgaataa aatttcagga tttattaaaa cgcctgcccc tattagcaat
       61 tgtgtcgtac gatttaatgc ggcacttggc agcatcctga ctttatacgt cttccctcgg
      121 tgagagaagg tatgaccagc attcggacct actcctcctc tcaccgcaac gaaaggtttt
      181 tctttattag caagataggc aataattttg cctttcccct cgtccccaaa aaagcctccg
      241 acaaccacaa gacatggcat attggaaatt gagcctatga ttatttaagc ctagttcgaa
      301 tatcgttgtt cataggatta aaatactgca gacaccatct actttcgatg acgctcgatt
      361 cagcagcagc aggaaatatg gtccaaatcc tggcggactt gccagatttt ctacgagaac
      421 aaatcatacg caagaggtta caagaatttg ttatttttga agaatcagat aagcgtgaaa
      481 cgatttctat ggcattaaac gctgcttctt cgattgatga gcataaactc actgtattag
      541 tgaagacttg gatggatgtt ctgtccaaat ttgatcctag cacgatagtt ctgatgttgc
      601 gattgtattg tgaagaaatt tcaaaggacc aaaccgcaat agagaaatta aatatggact
      661 gtctgattcg agcatttact actttggatg aagttaaaaa acaaaagctc attgattgcc
      721 taaaggaatc tatgttctct gtaccaaata gacataaaat catagagatc atgccaactg
      781 ccgcaataga gatcttggaa atgaaataat attattgatc gggacgtttg tcaggatttt
      841 tttgcagttc gccttcttgc ttttctaagc caaagaacat tttttcgtgt ttccgaagtg
      901 ctttgcgatg ttcaggtaga gacatatcca gtctcatttc attcattacc atgacagcat
      961 aattcgtcca ttccttccaa caatctggac aagaaggata aacttcggag cctggatcat
     1021 caactaattt ctcatcaaag tccttatgac atttgagaca aacctttacc atctgaaagc
     1081 atgctcgcac taggttattt tattctttat gtcgtggagt taacttaaga tctgtccttc
     1141 cacttacctt tcatcttatt gtacgagtga aaattcctta catgctcgcg catctgttcc
     1201 attccttcga atttcaagtt acaggatttg cactcataaa atataccttt tccatgtact
     1261 acttgaatgt gttgcatcat ctgctcaatc tttcggaatt tcgttccgca gccttcacat
     1321 aagtgttttt taaagatatt catggttggt caatgcctca tctcacgttg tttgtcccaa
     1381 cattttctgc ataactgacc ttcgatattc cattttggtt ttgggttgta acggataaac
     1441 cccaatctat cgttacatag aatacagtaa ttcaattttt tctcatattc ttgagccttc
     1501 ttttcaaaac aacttttgca gagtatacta ttatgttcca tattccattg ccatcgtgct
     1561 ttatttttat ctgattcaag cgaaagctct tttttacaga cagcgcaaat gttacccgct
     1621 tgtttgagct tttccttttg atcttgttgc cttagaataa attctttagt cttctctata
     1681 tgacaacttg aacaaagaaa cccttggatt tcccattcag gtttaggttt gtacttgtga
     1741 tttaacactg catcacaatt acagcatcgg aggacctctt ttttcctaaa tagatgcaaa
     1801 tttgtttacc tagcggagat attgttgtct tccaatacta aaacctactt tacaagcatc
     1861 aaagataaga tcactatctt gcttgtcata acagattaca tgaatgattg ttttataata
     1921 tcagaaaata ataattcaca atattttaat aaaactattg cccattcgaa tttagttaca
     1981 aaatatgaag aagattgaag cgatattccc gcttggaaga gtaaacagag tgttcgaagc
     2041 tcttgagaag atagatatcg gaggtttaac ctactttgaa tccaaaggca ggggacaact
     2101 cgctagacct gagattataa ctggaagagg cacttcaag
//
LOCUS       DASPUS010000048         2296 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1395276, whole genome shotgun sequence.
ACCESSION   DASPUS010000048 DASPUS010000000
VERSION     DASPUS010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2296)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2296)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2296
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1395276"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /gene="nadA"
                     /locus_tag="VEJ68_01100"
     CDS             complement(<1..332)
                     /gene="nadA"
                     /locus_tag="VEJ68_01100"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HXX05398.1"
                     /translation="MDLKSEILRLKKEKDVLILAHNYQLPEVQDVADYVGDSLGLSRQ
                     AAKTSNKTILFCGVHFMAETAAITCPDKKILIPDPAAGCSLSDTINASQLRDWKHEHP
                     GAVTVGYV"
     gene            complement(427..1245)
                     /locus_tag="VEJ68_01105"
     CDS             complement(427..1245)
                     /locus_tag="VEJ68_01105"
                     /EC_number="1.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate dehydrogenase"
                     /protein_id="HXX05399.1"
                     /translation="MKRIGLLGCGAIGTEIALALDSGKIPAKLTHVYDFSKDASSKLA
                     SKLQNKPVITDNVGLLAAAPVDLIVEAASQDAVRDNALTILQNRKDLMIMSVGALLDE
                     SILEIIEEGCKDFNKKVYLPSGAITGLDGVRAVKNELESLVLVTTKNPKALKGAKFFE
                     TSKINLEQLKEPTVIYEGTAQEAVKLFPANINVAALLSLAGLGSLKTKVKIVADPQTD
                     KNTHEIQAEGKFGKFSIKVGNVPSENNPKTSKLAILSAIECLRKICNNEIQVGF"
     gene            1360..2235
                     /locus_tag="VEJ68_01110"
     CDS             1360..2235
                     /locus_tag="VEJ68_01110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline dehydrogenase family protein"
                     /protein_id="HXX05400.1"
                     /translation="MEKHESTLIEKFLFGIAKQWIAGDTMEQALKSARSANKNGMGAI
                     INKLGEHVTTKTQIEETISEYLTLISNLRKFQVSGGISIKPTQVGLSKNLKDCQENLQ
                     KIIEKAAISQSFVWVDMESSEHTDDTISIYRSLFEKYERVGIAIQANLKRSIQDVDII
                     LKSGGKIRLVKGAYRETSRTAYKTRHEVDENYKKIMEMLFQNGNEFAIATHDSVLIDL
                     AIEFSKKHEKKFEFQMLKGIRDELKPVLVKDGFSVSEYIPYGTNWLPYSIRRLKERKR
                     NMLLLGSSFLHSHRV"
BASE COUNT          696 a          443 c          436 g          721 t
ORIGIN      
        1 tttacgtatc caactgtgac tgcaccagga tgctcatgtt tccagtcgcg aagttggctg
       61 gcattgatgg tatcagacag tgaacagcca gcagcaggat ctggaatcaa gatttttttg
      121 tcaggacatg ttattgctgc agtctctgcc ataaaatgca caccacagaa caagatggtt
      181 ttgttactag tttttgcagc ttgacgagaa agtccaagtg agtcccctac atagtctgca
      241 acatcctgta cctcaggtaa ttgataattg tgagccagta tcagtacatc tttttccttc
      301 ttcaatctga gaatttctga tttcaagtcc atttgccaaa ataaattggt cccccttgtc
      361 atttaaagga taataatgat gaccaaattt gttgccacaa agaaagattg tggcaatatt
      421 tgccatttag aatcccactt ggatttcatt gttgcatatc ttccgtaggc attctattgc
      481 agaaagtatt gcgagcttac ttgttttggg gttattttcg cttggtacat ttcccacctt
      541 tatcgaaaat tttccaaatt tgccttcagc ttgtatctca tgagtgtttt tgtcagtttg
      601 agggtctgca acaattttta ctttggtttt tagactaccc aaaccagcta gactgagaag
      661 tgcggcaaca ttgatgttgg caggaaataa ttttactgct tcttgagctg ttccctcata
      721 gattactgtt ggttctttta attgttcaag atttattttt gatgtttcaa aaaattttgc
      781 cccttttagt gccttgggat tttttgtggt cacaagcacc aatgattcca attcattttt
      841 gacagctctt acgccatcaa gccctgtaat tgcaccagat ggaaggtata cttttttgtt
      901 aaagtccttg cagccttctt caattatttc cagtatagat tcgtctaaga gtgcaccaac
      961 actcattatc atcagatctt ttctgttttg aagaatagtt aatgcattgt ctcttactgc
     1021 atcctgagat gctgcttcaa ctatcaaatc aaccggtgct gcagccaaca aacccacatt
     1081 gtctgttatc acgggtttgt tttgtaattt agatgcaagc ttacttgatg catcttttga
     1141 aaaatcgtat acgtgggtaa gtttggctgg aatttttcca gaatctaatg ccaaggcaat
     1201 ctctgttcca atagcaccac atccaagcaa ccctattctt ttcaaatcat ctacttttga
     1261 gataccccct tgttaaatct attatttgtc acctattcat atatggcaca aaattgaatt
     1321 atgcaatttg tgtgacaatc atggagaata gatcagaatt tggaaaaaca tgaatcaaca
     1381 cttatagaaa aatttctttt cggaatcgca aaacaatgga tagcggggga tacaatggag
     1441 caggccctca aatctgcacg ttctgcgaac aaaaatggga tgggtgcgat aataaacaaa
     1501 cttggggaac atgttacaac aaagacgcag atagaggaaa ccatatcaga atatcttacc
     1561 ctaatctcca acttgcgaaa attccaagtt tctggaggaa tatcaattaa acctacgcag
     1621 gtgggattgt caaaaaatct caaagattgt caagaaaatc ttcaaaaaat tatcgaaaag
     1681 gcagcaatct ctcaatcgtt tgtctgggtg gacatggaat catctgaaca tactgacgat
     1741 acaatcagca tttaccgtag tctgtttgaa aaatatgaaa gagttggaat tgcgattcag
     1801 gccaatctca aacgaagtat tcaagatgta gatatcattc ttaagagcgg cggcaagatt
     1861 cggctagtaa agggcgcata tagagaaacc agcaggacag catacaagac caggcacgag
     1921 gttgatgaaa attacaaaaa aataatggag atgctatttc aaaacggaaa tgagtttgca
     1981 attgcgactc atgattcagt cttgattgat cttgctatcg agttttcaaa aaaacatgag
     2041 aaaaaatttg aatttcaaat gttaaaggga atacgagatg aattaaagcc agttttggtt
     2101 aaagatgggt tttcagtctc tgaatacatc ccttatggaa ctaattggct cccatattca
     2161 ataagaagac taaaggaaag aaagcgcaac atgttgcttc ttggtagttc ttttcttcac
     2221 tcacatcgcg tttgagtctg ctctctcatg aattgcaaca gataatatgc accgcccgct
     2281 cctttgcctg aaatcc
//
LOCUS       DASPUS010000049         4041 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_847162, whole genome shotgun sequence.
ACCESSION   DASPUS010000049 DASPUS010000000
VERSION     DASPUS010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4041)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4041)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4041
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_847162"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            63..683
                     /locus_tag="VEJ68_01115"
     CDS             63..683
                     /locus_tag="VEJ68_01115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05401.1"
                     /translation="MPDKYRRELAVAIYLAHLNPVTKAHVEIISELKNDNKVKILPVT
                     FMWNGKEINSRSFPFSYELRKKMLQSVFGDSVDVSSNYTFYAPFAKYMPPLISPYSWK
                     IKNQILEGVKEDYFTYTGDKAEAFVLRIYGLNPKVGKRKETSASFVKQKMFDAALGKD
                     TDWEKYVEPEVVKIIQDNWEIVKKFASAPDLTYRVLGMKFPSMGFW"
     gene            719..1636
                     /locus_tag="VEJ68_01120"
     CDS             719..1636
                     /locus_tag="VEJ68_01120"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016939699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transaminase"
                     /protein_id="HXX05402.1"
                     /translation="MKSFVPKFVWFDGKFVTDAKASVSIMTHAIHYGTSVFEGLRGYW
                     NSKNLYIFRLDDHIKRFRRSGKVYSIALRYSDKQIADAIIGLCKKNNVKESCYIRPFY
                     FVGRYGINLHVTEKTPTHAGIVMFPFGDLFNKNGIKAGISSWRRIHDVSTPPLAKMGG
                     NYLNSILATQECKRNGYDEAILLDQLGNISEAPGENIFMIRNEKLLTPPPSSSALEGI
                     TKESVIRIARDLGYETVEREIPRTEIYFADEVFLTGTAAEVTPIISVDGKMIGEGKIG
                     KITRQIQKTYSDITMGKNRKYSHWITSVY"
     gene            1638..2573
                     /locus_tag="VEJ68_01125"
     CDS             1638..2573
                     /locus_tag="VEJ68_01125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010194091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HXX05403.1"
                     /translation="MKVVQIGVGGFGKNHARILSQLGALSAICDADSVRAKDLGTKYS
                     VNHYSNLDTLLDSEKFDAAFICTPTSTHFGIAKNLLQQKKHVFVEKPMTYLSHEGEEL
                     LELAKKNKVVLTSGYIERFNPAVSLVKEYVKTKKYGELIMLEFHRENRMPPHIKDVGI
                     IYDTSVHDIDTAMWLFDDAPEVVFARSGRIRHEHEDFATIMLGFKENKVAIISSNWIT
                     PIRVRKFNAVCSDAIISSDFITQEVKIETNSGAEIPRKDVEEPLLLEIKNFISSVQGK
                     ENIRVKPEHAVNTTRIAEAALLSSHKGTPIYLDLK"
     gene            2570..2839
                     /locus_tag="VEJ68_01130"
     CDS             2570..2839
                     /locus_tag="VEJ68_01130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HXX05404.1"
                     /translation="MNKKMMEILACPIDKHFPLEIISLSSKDDIIAEGVIFCSECSRF
                     YPIVDEIPIMLPDELRDKNQDIEFLKKNENNLPQKILNEGVPWHL"
     gene            2847..3323
                     /locus_tag="VEJ68_01135"
     CDS             2847..3323
                     /locus_tag="VEJ68_01135"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HXX05405.1"
                     /translation="MVTNFISEKAKLGKNVRIWHFAYVGDNSEIGDNVKIGSLAHVDY
                     NVKIGENTMIEGFVYIPPLSRIGKNVFIGPAAALTNDPYPPSKKMIGVIIEDGAVIGS
                     RAVIKAGVKIGKNSVVAMGAVVTKDVPPNTVVMGIPAKIKYSREEYDKKRNQWENS"
     gene            complement(3320..3553)
                     /locus_tag="VEJ68_01140"
     CDS             complement(3320..3553)
                     /locus_tag="VEJ68_01140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05406.1"
                     /translation="MNGIQIFVFIFIMWIMIIAGGGILLSIIAPISIHGFGKNDEFFD
                     SGVKALIAILLVITWVFIISKIKNWIFQKQIKH"
     gene            complement(3550..>4041)
                     /locus_tag="VEJ68_01145"
     CDS             complement(3550..>4041)
                     /locus_tag="VEJ68_01145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine-1-phosphate transferase"
                     /protein_id="HXX05407.1"
                     /translation="TIASFALTISLFIVHNYDIAIASLPLGFVSLAFYKYHKFPSKIF
                     PGDSGAVMLGAMYGTIAIVGHVEVIAAVALLPAVINSFLFLSSVKRIIEHRQLKANPV
                     THTEDYKLMATAEKDAPVTLVRLILAHGPMTEKEVGFAIFKLALFSAALSIITAIMMG
                     IKL"
BASE COUNT         1453 a          631 c          786 g         1171 t
ORIGIN      
        1 aagtcccatc gtccccacat tgtatgaata tattttattt caaattaatc aatgattgaa
       61 atatgccaga taagtatagg agagaattgg ccgtcgcaat ttatcttgct catctgaatc
      121 ctgttacaaa agctcatgta gaaataatca gtgaattaaa aaacgataac aaggtcaaga
      181 ttcttccagt cacattcatg tggaatggaa aggagatcaa cagtagaagt tttcctttta
      241 gctacgaatt aagaaaaaaa atgcttcaat ccgtatttgg tgattcggta gatgttagct
      301 caaattatac attttatgca ccttttgcaa agtatatgcc cccattaatt tcgccgtatt
      361 cgtggaagat taaaaatcag atacttgaag gggtcaaaga agattatttt acatatactg
      421 gcgataaggc ggaggcattt gtactgagaa tttatggtct caatcctaaa gttggtaaaa
      481 gaaaggaaac atctgcttca tttgtgaaac aaaagatgtt tgatgcagct ttaggaaagg
      541 atacagactg ggaaaaatat gtagaaccgg aggtagttaa aataattcaa gacaattggg
      601 agattgttaa gaaatttgca agtgcgcctg atctaacgta cagagtcctt ggaatgaaat
      661 tcccaagtat gggtttttgg tagaaataga ttaattatag acagaattgg tttttaatat
      721 gaaatctttt gttccaaaat tcgtttggtt tgatggtaag tttgtaacag atgctaaagc
      781 gagtgtttcc ataatgacgc atgccataca ttatggtaca tctgtttttg aaggattacg
      841 cggatattgg aattctaaga atctatacat tttcagacta gacgatcata tcaaacgatt
      901 tagaagatct ggcaaagtgt attcaattgc gttacgatat tcagataaac agattgcaga
      961 tgcaattatt ggtctttgta aaaaaaataa cgtgaaagaa tcctgttaca taagaccttt
     1021 ttactttgtc ggaagatatg gtataaactt acacgtaact gaaaaaacac cgacacacgc
     1081 tggaatagtt atgtttccat ttggagattt atttaacaaa aatggaatca aggcaggtat
     1141 ctcttcgtgg agaagaatcc atgatgtctc tactccccca ttagcaaaga tgggtggtaa
     1201 ttatctgaat tccatattag ctacacaaga gtgtaaaaga aatggttatg atgaagcaat
     1261 attgttagat caacttggaa acattagtga agcaccggga gaaaatatct tcatgataag
     1321 aaacgagaaa ttattgactc caccacctag ttcctcagca ttagaaggaa taacaaagga
     1381 atcagtaatc agaatagcta gggatttagg atatgaaacc gtagagcgcg aaattccacg
     1441 aaccgagatt tattttgctg acgaagtatt tcttacagga actgcagccg aagtaacacc
     1501 aattatttct gtagatggaa aaatgattgg tgaaggaaag ataggaaaaa taactagaca
     1561 aattcagaaa acttattcgg atataaccat gggaaaaaac agaaagtact ctcattggat
     1621 aacatcggtg tattaagatg aaagttgttc aaataggagt tggagggttt ggaaagaatc
     1681 atgcaagaat tctctctcag cttggtgcgc tctctgcaat atgtgatgca gattctgtac
     1741 gagctaaaga tctgggcacc aagtattctg taaaccatta ttcaaatctg gacacgcttt
     1801 tagattcaga aaaatttgat gccgctttta tttgtactcc gacttcaaca cattttggta
     1861 ttgcaaaaaa tcttttgcaa caaaaaaaac atgtatttgt tgagaaaccc atgacctacc
     1921 tgtctcatga aggtgaagaa ttgctggaac ttgctaaaaa gaataaggtt gtattaacat
     1981 caggttacat agagcgattt aatccagcgg tctcacttgt aaaagaatat gttaaaacaa
     2041 aaaagtatgg tgagcttata atgttagaat ttcatagaga gaacagaatg cctccacata
     2101 tcaaagatgt gggcataatt tatgatactt cggttcacga cattgatact gcaatgtggt
     2161 tatttgacga tgcacccgaa gtagtatttg caagatcagg aaggataaga catgaacatg
     2221 aagattttgc aacaataatg ctcggcttca aagaaaacaa ggtagcaatt atttcatcaa
     2281 actggattac tccgataagg gttagaaaat ttaatgcagt atgtagtgat gcaataatct
     2341 catcggattt cataacacaa gaagtaaaga tagagacaaa ctcaggagct gagattccac
     2401 gaaaggatgt agaagagcct cttctgttag agataaaaaa ttttatttca tcagtccagg
     2461 gaaaagaaaa catacgcgta aaacctgaac atgcggttaa tactacaaga atagctgaag
     2521 cggcgctttt atctagtcac aaaggtactc cgatatatct ggatcttaaa tgaacaaaaa
     2581 aatgatggag attcttgctt gcccaataga caagcatttc ccgcttgaga tcatttcgct
     2641 ttcctcaaaa gatgatatta ttgcagaagg agtcatattt tgttcagaat gttctagatt
     2701 ttatcccata gtggatgaaa tacccatcat gttgcctgat gaattaagag ataagaatca
     2761 ggatatagaa ttcttgaaga aaaatgagaa taatcttcct caaaaaattc taaatgaagg
     2821 agtaccttgg catttgtgat ggaaaaatgg taacaaattt tatttctgaa aaagcaaaat
     2881 tgggaaagaa cgtaagaata tggcattttg cgtacgttgg agacaactca gaaattggag
     2941 ataatgtgaa gattggatct cttgcacatg tagattataa cgtgaaaata ggcgaaaata
     3001 ccatgataga aggatttgtg tatattcctc ctctatcaag aataggaaaa aatgttttca
     3061 taggtcctgc agcagcatta accaacgacc catatcctcc aagtaaaaaa atgataggcg
     3121 tcattattga ggatggtgca gtgataggtt cacgtgcagt catcaaagct ggtgtaaaaa
     3181 ttggtaaaaa tagcgtggtt gcaatgggag ccgtggttac aaaagatgtt ccccctaata
     3241 cagtagtaat gggaatccca gctaaaataa aatattctcg tgaagaatat gacaaaaaaa
     3301 gaaaccagtg ggaaaattcc tagtgtttta tctgtttttg aaatatccag ttttttattt
     3361 ttgatataat gaaaacccat gttattacaa gcaagatagc aatcaacgct tttactccgg
     3421 aatcaaaaaa ctcgtcattt ttgccgaaac catgaataga aataggtgca attatggaaa
     3481 gaagaattcc accgccagca attatcatta tccacattat aaagataaaa acaaaaattt
     3541 gaatcccatt cataatttaa tacccatcat aattgcagta attatagaaa gtgcagcaga
     3601 aaataatgct aatttgaaaa tagcaaatcc tacctctttt tcagtcatag gcccatgagc
     3661 aagaattaat cttaccagag taacaggcgc atctttttct gctgttgcca ttaatttata
     3721 atcttctgta tgagttactg gattggcttt aagctgtcta tgttctataa ttcgtttgac
     3781 gcttgaaaga aatagaaaag agtttatcac agctggcaat aaagcaacgg ctgcaattac
     3841 ttcaacatga ccgactattg caatggtacc atacattgct cctaacatga ctgcaccaga
     3901 atcgccagga aatattttac ttggaaattt gtgatatttg taaaatgcaa gagatacaaa
     3961 acctagaggc aaacttgcaa ttgctatgtc gtaattatgt actataaaca aagatatggt
     4021 aagagcaaaa cttgcaatag t
//
LOCUS       DASPUS010000050         2102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_436927, whole genome shotgun sequence.
ACCESSION   DASPUS010000050 DASPUS010000000
VERSION     DASPUS010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2102)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2102
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436927"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /gene="rps2P"
                     /locus_tag="VEJ68_01150"
     CDS             complement(<1..203)
                     /gene="rps2P"
                     /locus_tag="VEJ68_01150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018593.1"
                     /note="one of the last subunits in the assembly of the 30S
                     subunit; absence of S2 does not inhibit assembly but
                     results in an inactive subunit; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HXX05408.1"
                     /translation="MSKDETEHMEKYVLSTGIRVGTQVKTKFMIPFITKATNEGLYII
                     DSKKTLSRIQTASKFINRANVSKV"
     gene            complement(213..1451)
                     /locus_tag="VEJ68_01155"
     CDS             complement(213..1451)
                     /locus_tag="VEJ68_01155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase"
                     /protein_id="HXX05409.1"
                     /translation="MARITSIRGRLLYNSRGTKTVEIDVVSDKINLGRVCAPSGASVG
                     KHEAISFPDNNPEKSLEILKKNEKKFIGLDSSDLKSVHQTLRKIDSTHNYSKIGGSVA
                     FALTIAAVESAAKSEKIPLFKLLNKESNLRFPFPLGNILGGGAHAGPGTPDIQEILIC
                     ATGSKTIKEAIKVNFAVHKELGKILAKKDPGFTNGRGDEGGWAPKLTNDKALEISAKA
                     CEQLGFTLGKEVSLGVDFASSTQWNEEKKKYVYERAGFENTPEEQIEFASEIIKKYKL
                     VYAEDAVHEEAFDDMAILTKKFPAVLVTGDDLLVTNTEILKKAAKIKACNAAILKVNQ
                     AGSLYDALEFAKEASKNKIRLITSHRSGESSDSHISHIGIATKSKMLKVGIVGGERVA
                     KLNELLRISEYDLIRGMAEI"
     gene            complement(1453..1689)
                     /locus_tag="VEJ68_01160"
     CDS             complement(1453..1689)
                     /locus_tag="VEJ68_01160"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit N"
                     /protein_id="HXX05410.1"
                     /translation="MLIPVRCFTCGNLIADKYKEYQNRVKSGEDPAKVLDSFGLKRYC
                     CRTMMLTSVETIHQVIPFYEAIRRREQEVQSELE"
     gene            1742..1826
                     /locus_tag="VEJ68_01165"
     tRNA            1742..1826
                     /locus_tag="VEJ68_01165"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1778..1780,aa:Leu,seq:gag)
     gene            1913..>2102
                     /locus_tag="VEJ68_01170"
     CDS             1913..>2102
                     /locus_tag="VEJ68_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013482848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate epimerase"
                     /protein_id="HXX05411.1"
                     /translation="MEITVKQMMQIEENGHQMGFPRKLMMENAGAVTARYLLKKYEDI
                     SKKKISVFAGLGNNGGDAM"
BASE COUNT          568 a          434 c          392 g          708 t
ORIGIN      
        1 acctttgaga catttgccct gttgatgaat ttggaagcag tctgaatgcg agatagtgtc
       61 ttcttgctgt caataatgta gaggccttcg tttgtagcct ttgtgataaa tggtatcatg
      121 aattttgtct ttacttgagt tccaactctg attcctgtag agaggacata cttttccatg
      181 tgttctgttt cgtctttact cataccgtgt ttctaaatct ctgccattcc acgtattaaa
      241 tcatactctg aaatacgaag cagttcattt agtttagcta ctctttcgcc tccgacaatt
      301 cctactttta gcatcttaga ttttgtagct attccaatgt gagatatgtg agaatctgag
      361 gattcgccag atctatgtga cgtgattaat ctaatcttat tcttagaagc ttccttcgca
      421 aattcaagtg cgtcgtaaag actacctgct tgattgacct ttagaattgc tgcattgcat
      481 gcttttatct ttgcggcttt ttttagaatc tctgtatttg ttactaggag atcatctcct
      541 gtcaccaaaa cagcaggaaa cttctttgtc aaaatagcca tgtcatcaaa agcttcctca
      601 tggactgcgt cttctgcata taccagtttg tatttcttga ttatttcaga ggcaaactcg
      661 atctgttctt ccggagtatt ttcaaaaccc gctcgttcat agacatattt ttttttctct
      721 tcattccatt gtgtagatga ggcaaagtcc actcccagcg aaacttcttt tcccaaggta
      781 aatcctaatt gttcacatgc tttggcagaa atttccaaag ccttgtcatt ggtaagtttt
      841 ggggcccacc ctccctcatc tcctcttccg tttgtaaatc ctggatcttt ttttgctagt
      901 atcttgccaa gttccttgtg tacggcaaaa ttgactttaa tagcttcttt tatggtcttc
      961 gaaccagtag cgcaaatcag tatttcttga atatctggag ttccaggacc tgcatgtgct
     1021 ccacctccta gaatgttacc aaggggaaac gggaatctaa ggtttgactc cttgtttaac
     1081 aatttgaata agggaatttt ttctgatttt gcagccgatt ccacagctgc aatagttaga
     1141 gcaaatgcga cagaccctcc tatctttgaa taattgtgag tggagtcaat ctttctcaag
     1201 gtctggtgga ctgatttaag atcagatgaa tccaagccga tgaatttttt ctcgtttttc
     1261 tttaaaattt caagactctt ctcagggttg ttgtcaggaa aacttattgc ttcatgcttg
     1321 ccgacgcttg caccagacgg agcgcacact cttccgagat taatcttatc tgaaacaaca
     1381 tctatctcaa ctgtcttagt acctcgactg ttgtatagta gtcttcccct gattgacgta
     1441 atccgtgcca ttctattcta gctcggattg aacttcttgc tcccttctcc taattgcttc
     1501 gtaaaacgga attacttgat gaatagtttc aacagatgtt aacatcattg ttctgcagca
     1561 atatcgcttc aaaccaaagg aatcaagtac ctttgctgga tcctctccac tttttacacg
     1621 attctggtat tccttgtatt tatcggcaat taaatttccg caagtaaaac atctaacagg
     1681 tattaacaca ttttcaaaaa gtaatcaagg cttataaaaa ccatacatgg gtattgcaac
     1741 tgcgggagtc gcccagcctg gtcaaaggcg ctagcttgag gggctagtat cttaggattt
     1801 cgagggttca aatcccttct cccgcactga cagttttttc aaattatgtt tagagaaaat
     1861 agtttttagc aatttggtaa agcccttatt tgacatgaaa ttctaaaact ctatggaaat
     1921 cacagtaaag cagatgatgc agattgaaga aaacggacat caaatgggat ttccaagaaa
     1981 actgatgatg gaaaatgcgg gagcagtaac agcaagatac ctcctcaaaa aatacgagga
     2041 tatatctaaa aagaaaatca gtgtatttgc tggtttggga aataatggag gtgatgcaat
     2101 gg
//
LOCUS       DASPUS010000051         4647 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1532554, whole genome shotgun sequence.
ACCESSION   DASPUS010000051 DASPUS010000000
VERSION     DASPUS010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4647)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4647
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1532554"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..196
                     /locus_tag="VEJ68_01175"
     CDS             <1..196
                     /locus_tag="VEJ68_01175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05412.1"
                     /translation="EITENIVNALRINNQLTVNAIDAAAENFRTFNRTIDSVTESNTR
                     AAKAWNSFVTAQQQQFLHKQ"
     gene            687..1736
                     /locus_tag="VEJ68_01180"
     CDS             687..1736
                     /locus_tag="VEJ68_01180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HXX05413.1"
                     /translation="MKAAVYREHNKDPRKVVKIEDIEIPKIKCNQVLIKVEAVSYNYN
                     DLWGIWGEPIKIPLPHISGSDVSGTVIDIGEDVLHIKKGERIVGHPNLTCRICNDCTS
                     GKEYDCRQRQVWGFQTGPLWGGFAQYTYLPEVNVIKIPDNLSFQDAAAISMVGMTSWH
                     MLVTRANIQPGQTVLIMGGGSGMGIAGIQIAKLFNCDVIATAGTQEKMDKCIKLGADH
                     VVNHREPNWYKKVRNLTNNQGVDVIFEHIGKSVFAEEVSLLNVGGTLVSTGATTGYDS
                     KLDLKDLFFRGLNLIGATQGTRAGLEKVVKWTSKGKIKAIIDTVYPFEDMVMGHIKMM
                     ESRLFGKLITTPQKL"
     gene            1925..2203
                     /locus_tag="VEJ68_01185"
     CDS             1925..2203
                     /locus_tag="VEJ68_01185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05414.1"
                     /translation="MMTRDETSQYAMQAVLRAATREDFEMNLGRLQYSMWKYEKLIRA
                     TLPILLNRDGDYESKFYLLLSFDVDSDAKSIIENKVLPYVENNKEIFS"
     gene            complement(2284..2415)
                     /locus_tag="VEJ68_01190"
     CDS             complement(2284..2415)
                     /locus_tag="VEJ68_01190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05415.1"
                     /translation="MSITTASGNTLPAQASSKKGNELLEKKISTAIEILIQESSSVN"
     gene            3098..3670
                     /locus_tag="VEJ68_01195"
     CDS             3098..3670
                     /locus_tag="VEJ68_01195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05416.1"
                     /translation="MRLVTNLKTTIPLAFNVVFSNPVYIGISTAVFTIFWVIFNVFDQ
                     LLFFSPVVTFYLPEDAVTGFIITNVTSVLMGILVAMNIYVIRNSKIKLDRSLFSGSIL
                     GIVSSACPGCSSFGFLAISTFGGFGIIATDFLTNYQTALRLVSIAILLWALYSVHNKI
                     TKSCIFTTLPSNKRQSKTTTSSDSSAPTAS"
     gene            3691..4404
                     /locus_tag="VEJ68_01200"
     CDS             3691..4404
                     /locus_tag="VEJ68_01200"
                     /inference="COORDINATES: protein motif:HMM:NF024498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HXX05417.1"
                     /translation="MNSDLDPNIRKITLLTIFATIGLVISGVALLPSYNLSQVAAQQA
                     GNNAQLSLSMLKQEGVPLLGSPSARITVIEFADFQCPFCARFAKDIQPQINQTYIQTG
                     KVNMVYVHFTKFGPDSVTAAMAAQCANDQGKFWNFYNILFKNQGAENSGWASKDNLKK
                     FALQIPGLDAQKFNTCLDSGKYASLVQNQLAFGTSLKVPETPAFIIEKSDGSNLDYLP
                     GAYPFPAFQALIDKKLSIQ"
     gene            4444..>4647
                     /locus_tag="VEJ68_01205"
     CDS             4444..>4647
                     /locus_tag="VEJ68_01205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05418.1"
                     /translation="MSTMTNTTNLTLETESCKQKIEDAAEGLTARYFNLLHDDVLPQN
                     KENAMTICNYIQSMKQELNLSDSY"
BASE COUNT         1533 a          818 c          869 g         1427 t
ORIGIN      
        1 cgaaatcaca gagaatatag ttaatgcact acgtatcaac aaccagctga cagtcaacgc
       61 gatagatgca gcagcagaaa actttagaac ctttaatcga acaatcgatt ctgtgacaga
      121 atctaatacc cgtgctgcaa aagcttggaa ttcattcgtc acagcacaac aacaacaatt
      181 cctccataaa caataacttt tttgttttgt ttttattttt caagatccta tctgaaggcc
      241 cgggagcagg gtcagcttct gtaatagctg tactagtgta agattccata aacgctattg
      301 tctcccatga tttttacgcc tgaggatttg accttttttg attaatacca ggtaactccc
      361 tcagtttctg cttaaactca gggactcact tgaagggcgt agagatcctg gatgaatagg
      421 tttagacgat tattgatacg atggggaaaa agtagaaaaa ctatgtagct atacaccgaa
      481 cattttccat tgatgcaatt ggcataacaa ccttaaccag taagggactt gagtgttatg
      541 taatcacgac gttgcgataa agcggtaatg aaaattaact gctttctatt tctataatgg
      601 tgttattact attttctttt tgtatatttt ttgtaacatt ttctatacct atactttaaa
      661 tttcatattg ttttttttat agatatatga aggcagctgt atatcgtgag cataataagg
      721 atccaagaaa agttgtaaaa atagaagaca tagaaattcc aaaaatcaag tgtaatcaag
      781 ttcttataaa agtcgaagca gtctcctata attacaatga tctttgggga atttggggag
      841 aaccaatcaa gattcctctt cctcacattt ctggaagtga tgtttcggga acagtaatag
      901 atattggaga agatgtttta catataaaaa aaggagaaag aatagtaggg catcccaatc
      961 taacatgtag aatatgtaat gactgtactt ctggcaaaga atatgactgt cgccaaagac
     1021 aagtatgggg gtttcaaact ggcccattat gggggggatt tgcccaatat acatatttac
     1081 cagaggtcaa tgtcataaaa attccagata atctctcttt tcaagatgca gcggctattt
     1141 ctatggtagg gatgacttct tggcacatgt tagttactag agctaatatt cagccaggac
     1201 aaactgtctt gattatggga ggcggaagtg gtatgggaat agcaggtatt caaattgcaa
     1261 agttgttcaa ttgtgatgtt atcgcaacag ctggtacgca agaaaaaatg gataaatgta
     1321 ttaaattagg tgctgatcat gttgtaaacc atagagagcc taattggtac aagaaagtta
     1381 gaaatttaac aaataatcaa ggcgtggatg ttatttttga acatatagga aaatctgtat
     1441 ttgcagaaga ggttagcctc ttaaatgtgg gtggtacttt agtctctact ggagcaacaa
     1501 caggatatga ttcaaaatta gatttgaaag atctcttctt tagaggactt aatcttatcg
     1561 gagctactca aggaacacgt gcaggattag aaaaggtagt taagtggaca agtaaaggga
     1621 aaataaaagc aataatagat acagtttatc ctttcgaaga tatggtaatg ggtcacataa
     1681 aaatgatgga atcacgattg ttcggaaagc tgattaccac tccacaaaag ttatgattca
     1741 atgtgtttga attttccctg aatcaatcaa atttgaacaa tggattgatt gttatcataa
     1801 cgtattatag ttactcacaa acccaagaca ataacactag cactaaagta tcagaaaaat
     1861 aaaaaataac aaaacgatag ctactgttta cgtgcccaag tagcggagac aaaatttagc
     1921 tcccttgatg acaagggatg aaacttcaca gtatgctatg caagctgttc ttcgcgccgc
     1981 aacacgggaa gactttgaaa tgaatttagg tagattgcaa tactcgatgt ggaaatacga
     2041 aaagctgatt cgtgcgacac ttccgatttt actcaatagg gatggtgatt atgagagcaa
     2101 gttttatcta ctgttgtctt tcgatgtaga ttcagatgct aaatctatta ttgaaaataa
     2161 agtactaccg tacgtagaaa acaataaaga aatattcagt tagtgagtat tacttttcag
     2221 gtagatcctg aaacaataga tccttagaca gtaaagcaac atgagccgat tcctgtctca
     2281 agattaattc acagatgacg attcctgtat caaaatttca attgcagtac tgattttctt
     2341 ttccaataat tcattgcctt ttttagacga ggcctgtgct ggtagcgtat taccagatgc
     2401 agtagtaatg ctcaagagct tgtcttcgaa ttcctgacat ttcttctact tctattaggt
     2461 cttctaggta aacctttcta aatcatgatt aaatcctcac atctggtttt attcctgtca
     2521 gttgagtcag tcaaaactgt caaagtttgt cctgtctaaa ccttacaaca gattcgtttt
     2581 gtctatagat gagaacctag tttactactg taatatctat ggacgtcctg cactgcgatc
     2641 gtatctacat agatattacc tgcaaatact cttttttaca aatcgactaa aaattctttg
     2701 atacgtgatt gaggattccc tccggtgttc ttatcagaca acatttataa tgatatagta
     2761 tattgttctg ttagaaccca gtagattgta aaagcctccc caaaactaaa gaacagtaga
     2821 ttgtaaatca tctgtttaac atgaattttt cgtggcgaca gaatttagcg gccagaggca
     2881 tttcgacaag tgaatatgca atcgacgacc gacatactga cgtttaacct gtgatttcaa
     2941 tcggtatcga ctctgcagtg atgaatcgaa tttctgagcg ccacgattaa taatattcgt
     3001 agcagtgaaa ttacaatctt aatggatacg gaaaatcatg tattaaatct gtctatccga
     3061 gaattcttaa atatgtttct ttatatatag tactcatatg aggttggtaa caaacttaaa
     3121 gacaacaata ccacttgcat tcaatgtagt attctcaaat cctgtgtata ttggcatatc
     3181 tactgcagta tttaccatat tttgggttat ttttaatgta tttgatcaac ttcttttctt
     3241 ctcgccagtc gtgacctttt atctaccaga agatgcagta actggattca taataacaaa
     3301 cgtaacttca gtattgatgg gaattttggt tgccatgaat atatacgtaa tcagaaattc
     3361 aaagataaag ttagatagat cattattctc tggatcaatc ctaggaatcg tatccagtgc
     3421 atgtcctggc tgttcgtctt tcgggtttct tgcaatatct acttttggag gatttggcat
     3481 aattgcaaca gactttctta caaattacca aactgcatta agattagtat caatagccat
     3541 actcttatgg gcattatatt ctgtacataa taagatcaca aaatcctgta tttttaccac
     3601 attgccaagt aacaaaaggc aatcaaaaac aactacttcg tccgattcat cagcaccaac
     3661 agcatcttga aaaatggagg aagatctaat atgaatagtg atttggatcc caacatcaga
     3721 aaaataacat tactaaccat ttttgcaaca ataggattag ttatctcagg ggtagcactc
     3781 ttgccatctt ataatttgag ccaagttgct gcacaacaag cgggaaataa tgcccaactt
     3841 tctctgtcaa tgctgaaaca agagggagta ccgctgttgg ggagcccatc agctcgtatt
     3901 accgtaatag aatttgcaga ttttcaatgc ccattctgtg cacgattcgc taaagacatt
     3961 caacctcaaa ttaaccagac ttatattcag accggtaagg ttaacatggt atacgttcac
     4021 tttacaaagt ttggtcctga ttcagttact gctgctatgg cagcccagtg tgctaacgat
     4081 caaggaaagt tctggaattt ttacaatata ttgttcaaga atcagggtgc tgaaaactca
     4141 ggctgggcta gtaaggacaa tctaaagaaa tttgcattac aaatacctgg cctagatgca
     4201 cagaaattta atacctgttt agatagtgga aaatacgcat cactagtgca gaatcaatta
     4261 gcttttggaa cttcgttaaa agttcctgaa acgcctgctt ttataataga gaagagtgac
     4321 ggttctaatc ttgattacct acccggagca tatccttttc ctgcatttca ggcgttaata
     4381 gacaaaaaac tgtcgataca atagtaactt atatactggt aacactgctg ctggaggtat
     4441 aagatgagta ctatgacaaa tacgacaaac ctcactttgg agacggaaag ttgcaaacaa
     4501 aaaatagaag atgcggcaga aggattgaca gctcgttact ttaacttact tcatgacgat
     4561 gtgttacctc agaacaaaga aaatgccatg actatctgta attacattca gtcaatgaaa
     4621 caggagttga acctttcaga cagctat
//
LOCUS       DASPUS010000052         2146 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1806993, whole genome shotgun sequence.
ACCESSION   DASPUS010000052 DASPUS010000000
VERSION     DASPUS010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2146)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1806993"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..636)
                     /locus_tag="VEJ68_01210"
     CDS             complement(64..636)
                     /locus_tag="VEJ68_01210"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010190117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003905 - alkylbase DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HXX05419.1"
                     /translation="MSPLPRSFYKRDTVDVAQDLLGKMLVRRIGNKIISGIIIETEAY
                     RYKDDPASHTFGGKTERNKAMFGEVGRAYVYFTYGMHYCVNAVAKDSKSEAGAVLIRS
                     LLPKEGLDYMIKQRKTSVISNLTNGPAKLTQALHISKDQYGEDLTRISNLFITNGNKI
                     KKSEIDARTRIGINKATDKLWNFRISDFDF"
     gene            complement(633..1214)
                     /locus_tag="VEJ68_01215"
     CDS             complement(633..1214)
                     /locus_tag="VEJ68_01215"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HXX05420.1"
                     /translation="MSEDLHNLRKTVISCNKCNLAKTRTNAVPGVGYHKSEIIFIGEA
                     PGRNEDLKGEPFVGTAGKILSEALEYAGLSRNQVYITNVVKCRPPNNRQPNAQEIDSC
                     NNYLLEELRLIHPKIICVLGNTAFGSLLNGNSITKNRGKIIKRNGQTYFVTVHPAASI
                     YNQELRQVLKDDLKLLAEILDKIKKGIPIEHTL"
     gene            complement(1216..>2146)
                     /locus_tag="VEJ68_01220"
     CDS             complement(1216..>2146)
                     /locus_tag="VEJ68_01220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008299471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HXX05421.1"
                     /translation="ITHNFVDVIANLSATAHCSGLTESVNTTEGGRGGLEMITGKNDL
                     LVVAQSISEKADALLDAQTVKEEKATVVMNPDFVALLTHEILGHPSEADRVLGKEMAW
                     AGGAWWSGKLGSKIGSTEFNVIDDPTIPSSLGWYKYDDEGVMASKKLLIEDGILRGHM
                     QSRETASIFNTVPNSAMRATGYAFMPLVRMACTCISPGNWDPEEMIRDVRDGYLICDM
                     KVPSIDMMRFNWSISCQYAYKIKNGELKDMVRDVIVMDTAPDFFNSIDARGKDFKVRP
                     ITNCGKGDPMQIMRMGNGGSHIRGIATVKSVEG"
BASE COUNT          589 a          472 c          339 g          746 t
ORIGIN      
        1 ggatagagca ggaaaatcaa tggaatttac tgctaccttg caggctagac cagcaacagc
       61 ttcctaaaaa tcgaaatcag atattcgaaa attccacagt ttatctgtag ctttattaat
      121 tccaattctt gttcttgcat caatttcaga tttttttatt ttgttcccat tggtaatgaa
      181 tagatttgaa attcttgtca ggtcctcacc atactgatct tttgatatgt gtaatgcctg
      241 agttagttta gcaggtccat ttgtcagatt agaaataaca gacgtttttc tttgttttat
      301 catatagtcc aaaccttctt ttggtaacag cgatcttatg agaacagcac ctgcttcgga
      361 tttgctatcc tttgctactg cgtttacaca ataatgcatt ccataagtaa agtagacata
      421 agcccttcca acctcaccga acatagcttt gttcctttct gttttgcctc caaatgtatg
      481 acttgctgga tcatctttgt accgatatgc ctctgtttca attataattc cagaaattat
      541 tttattgcct atcctacgaa ccaacatttt tccaagcaag tcttgtgcaa catcaacagt
      601 atctcttttg taaaatgagc gtggcagagg actcataaag tatgttctat tggaattccc
      661 ttttttatct tgtctagaat ttctgccagt aatttcaaat cgtcctttaa tacttgccgc
      721 aattcttgat tgtagattga tgcagcagga tgtacagtga caaagtaagt ttgaccattc
      781 cttttaatta ttttcccccg atttttcgtt attgaatttc cgtttaataa tgaaccaaaa
      841 gcagtattcc cgagtacaca aattatttta ggatgaatta gcctgagttc ttcaagcaga
      901 taattattac aggaatcaat ttcttgtgca ttaggttgtc tgttatttgg tggcctacat
      961 tttactacat tagtaatgta aacttgattt cttgacaaac ctgcatattc cagtgcttca
     1021 gaaagaattt tacctgcagt accaacaaat ggctcaccct taagatcttc atttctacca
     1081 ggagcctcac cgatgaagat aatctcggat ttatgataac ccacacctgg tactgcgttt
     1141 gttcttgttt ttgcaaggtt acatttgtta caggagataa ctgttttcct aagattgtgt
     1201 agatcttcag acattttatc cttctacact ctttacagta gctatacctc gtatatgcga
     1261 accgccattt cccatcctca ttatttgcat aggatcccct tttccacaat ttgttatagg
     1321 tctcaccttg aaatctttac ccctggcatc gattgaattg aaaaaatctg gtgcagtatc
     1381 cattactatg acatctctca ccatatcttt taattcacca ttttttattt tgtatgcata
     1441 ctgacatgaa atgctccaat tgaatctcat catgtctata gaaggaactt tcatatcaca
     1501 tattagataa ccgtctctca catcacgtat catttcttca ggatcccaat ttcctggaga
     1561 tatacaagta cacgccattc tcaccaatgg cataaacgca tatcctgttg cgcgcatcgc
     1621 ggagtttggc acagtattga agattgatgc ggtctctctg ctttgcatgt gaccccgtag
     1681 aatgccatct tcgatgagaa gtttctttga tgccataaca ccctcatcgt catatttgta
     1741 ccatcccaag ctagaaggga ttgtgggatc atcaattacg ttaaactcag ttgaacctat
     1801 cttagaacca agtttcccag accaccatgc accgcctgcc catgccattt cttttcccaa
     1861 cactctatca gcttcagatg gatgcccgag gatttcatgt gtaagtaaag caacaaaatc
     1921 aggattcatt actacagttg ctttctcttc ttttactgtt tgtgcatcaa gtaatgcatc
     1981 tgctttttct gaaatggact gagcaacaac aagcaagtca ttttttcccg taatcatctc
     2041 taatcctcct cttcctccct cagttgtatt tactgattca gtcaatccag aacaatgtgc
     2101 cgttgccgac aagtttgcta taacgtcaac aaaattatga gttatt
//
LOCUS       DASPUS010000053         5673 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_711119, whole genome shotgun sequence.
ACCESSION   DASPUS010000053 DASPUS010000000
VERSION     DASPUS010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5673)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5673
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_711119"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..270
                     /locus_tag="VEJ68_01225"
     CDS             <1..270
                     /locus_tag="VEJ68_01225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HXX05422.1"
                     /translation="PHSGRFLLATYLLAKGQSVDQIAPLFKNAPDYNERITRYQLEHI
                     SGESGKGTKYQCPSCDKLKSENLCFATVECDGIINPVQFGKRRKN"
     gene            270..1394
                     /locus_tag="VEJ68_01230"
     CDS             270..1394
                     /locus_tag="VEJ68_01230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase small subunit domain-containing
                     protein"
                     /protein_id="HXX05423.1"
                     /translation="MNEKNVALVESALKEYYFSHFDLIQVPPKPTQREFGYQKINGGM
                     TRHLSIRDNKELHLLLMKEIPSDVYCSNAYYSFPNMPMSEKDWQGADLIFDIDAKDLA
                     LPCRKDHSISKCVSCLTIKNDEQPQCIKCGSTKFDVSSIACKNCINKSKEQVKMLIEI
                     LTNDLGIKNEEITVHFSGNEGFHLRVVNDDYQTLDSQERADLADYVMFNGMMPETFGI
                     RRQGNSKPLLPNIDEKGWRGRVAKTLFGSKTKVPKITREITYSGYSTFQLKLEEMRQT
                     IGAKVDPKVTMDIHRIFRLEGSINSKSGLSKVQCNDIDTFDPSVDACLLGDDKVEITV
                     NCPVQIKLKNKKFGPYDNEKIVLPKYAAVYMICKGLGNAI"
     gene            1484..4324
                     /locus_tag="VEJ68_01235"
     CDS             1484..4324
                     /locus_tag="VEJ68_01235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016939502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HXX05424.1"
                     /translation="MYSSSTQSNPPPRDAGKYIRIGIGALIGIVIFVMASNQAVIMYM
                     NVKEFGVLFTRPLYYSIMSAIVLSAVALIRVNIKNRSSISWYGLNVALTFLKRGGSQS
                     ITDGIPSFKDYKLSVPNFIIWQITKVLLFGAFFTNIMFGFALIYLMNGHDLGVNSVEK
                     IFSLPFVTPSTDPSYALNNVIPMIPALTVLVPPLLAVIGLRLVLYVGLHNIVRVIINY
                     IQDSSKGKPKFLDYVSTIEGIIGIGVIWAGFNMFFTDQIDYNTKYQIGGTLAAGFALV
                     AFYFIDKFKSKVIIHPSKRDVYIRILTLAIIAIIAGSIMAVNNSIADAKKIEFLGPYK
                     AQQIGVNRYLGQLDQVQVVPHEVSLNSIPPSQIPDYVASNDEMLNKIRVWDWDAAFAK
                     LKPEIGLIPYVDFETNDILRFNDTLYWTASMKPILPSSVSQENIWYNQHLVYTHVDNG
                     FLTINAHNGTIVDSSTLFKQRIIYYGEGGLFSDTWSAYPMDRTVSTELNNASYSGTGG
                     LTVNPPISQIFEPNFFVSYPTEPIHIMRYRDIHDRMQLLYPYFQYDLFGTQVASLPVT
                     DGQKTYWLIPLIVGFDTKNVPWSVSNPYLRLVGYALLDVYNGNITLVKTGDDFFTNMF
                     ESQYGDQFVDMPPWLAKQVRYPEELFNWKVDMFNIYHVTDPTTFIQANNFYEVPDGIG
                     TYYIEAKPPGFEKPTYLGLLSLELRGSQGRNLAGFMTVQNDLPNLGNMEFYQVPLDSQ
                     TKLLGPSSVQEALNKDSDFRQLKTLLQNPRIGDNILYRIGDQDVYFIPVYTAGAGGVV
                     TQLGTIAAVGAAFNGDYYVGLGDTPQQAFASYLAKLSGVAPANFTSIISLDEATRIST
                     IKSILTDDKLTVVTPTTIQLPLTFNEGNVSFLQQSDLDNVKKLISNFVSEFIQPKSDR
                     VIFWQGNNTVNLGTIVVVDNVPELHYISIGVG"
     gene            4325..4870
                     /locus_tag="VEJ68_01240"
     CDS             4325..4870
                     /locus_tag="VEJ68_01240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962336.1"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HXX05425.1"
                     /translation="MLVVVDNGSVYTKSILDFLKTTGVDFDKLLFDEISISGLNRYSS
                     IILSGRRQNNPKMNAINAKIIRDAVENQKPLLGICYGAEILALTLGGTIKKMDSSRQG
                     IYQIDVIKDNPICSRKLDAFESHSYMIAKLDSQFIQLAKSSRCEFEIFQLNHHNIFGT
                     QFHPEMSDDGRTLLGKFISIQ"
     gene            4902..>5673
                     /locus_tag="VEJ68_01245"
     CDS             4902..>5673
                     /locus_tag="VEJ68_01245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05426.1"
                     /translation="MESAHTLSVPLVDEENICLPLVISAVSKYWEIDLPLAEATEIAQ
                     KYSGMKGSIMIEGVELAERHGLSSLILNSSLKELRKMIDIGIPPIVIMPGLRDVVQHA
                     SLIIGYDEIEKTIFHYIPEPDKIGAIPEKKFDEQWSEDDRLMLLLVPSDILKDINLQS
                     DNKEKSNRLCFNAERLRLQGRSEEATHLLKKALEINKSNSTAACLLAGILNDLNSSDA
                     LKYYKMSTDLNPRCYLAYRGLGNFYLKMKDYTKAEENYT"
BASE COUNT         1913 a         1026 c         1056 g         1678 t
ORIGIN      
        1 cctcattctg gaagatttct acttgctact tatctactag caaagggcca atctgttgat
       61 cagatagcac ctctcttcaa aaatgctcca gattacaacg aacgcataac aagatatcag
      121 cttgagcata tatcgggaga atctggaaaa ggtacaaaat atcaatgccc gtcttgtgat
      181 aaattaaaga gtgaaaatct ttgttttgca actgtagaat gtgatgggat cataaaccct
      241 gtccagtttg gcaaaaggag aaagaattaa tgaatgaaaa aaatgtggct ctggtcgaat
      301 cagccctcaa agaatattat tttagccatt ttgacttaat tcaagttccg cctaaaccaa
      361 cacagaggga gtttggctat caaaaaatta atggtgggat gacaagacat ctgtcaatta
      421 gagacaataa agaactacat ttgcttctaa tgaaagaaat cccttctgat gtttattgtt
      481 caaatgcata ctattcattt ccaaacatgc caatgtcaga aaaggactgg cagggagcag
      541 accttatttt cgatattgat gcaaaagatc tggctttacc atgcagaaaa gatcatagta
      601 tctccaaatg tgtatcttgt ctgacaataa aaaatgatga acaaccacaa tgcatcaagt
      661 gtggttcaac aaagtttgac gtatcatcca tagcatgcaa aaattgcata aacaaatcta
      721 aagaacaagt caaaatgtta attgagatac ttacaaatga cttgggtata aaaaatgaag
      781 aaatcactgt tcatttttct ggcaatgaag gatttcatct ccgagttgta aatgatgatt
      841 atcaaacatt agattctcaa gaaagagcag atcttgcaga ttatgtgatg ttcaatggaa
      901 tgatgcctga aacctttggg attagaaggc agggaaattc caagcctttg ttgccaaaca
      961 ttgatgagaa aggatggcga ggaagagtgg ctaaaacttt gtttggttca aagacaaagg
     1021 ttcctaaaat aacaagagag ataacttact ctggatattc tacattccaa ctaaaacttg
     1081 aagaaatgcg tcaaacaatt ggagcaaagg tcgatccaaa ggtgacaatg gatattcaca
     1141 ggattttcag gcttgaaggt tcaattaata gtaagagcgg attatctaaa gttcaatgca
     1201 atgacattga tacattcgat ccctctgttg atgcatgttt acttggagac gacaaagtag
     1261 agataactgt aaactgtccc gtccaaataa aactgaaaaa caaaaaattt ggtccatatg
     1321 ataatgaaaa aattgttctg ccaaaatatg ctgcagtcta tatgatatgc aagggattag
     1381 gcaacgcaat ttgagaaaac cactatttga cttattaata gtagtttaga aagtgattgc
     1441 gtaggtaaga cattaatttg acacaaagga aggtagtttg attttgtaca gttcatcgac
     1501 tcaatctaat ccacccccgc gtgatgctgg aaagtatatc cgaataggaa ttggagctct
     1561 tatcggtatt gtcatttttg taatggcaag caaccaagcc gtaattatgt acatgaatgt
     1621 aaaggagttt ggtgtacttt ttacaagacc actatactac tccataatgt ctgcaatagt
     1681 cctgtcagct gttgcgctga tacgggttaa catcaaaaat cgttcctcaa ttagctggta
     1741 tggtcttaat gtcgcactaa cgtttcttaa aagaggagga agccaatcca tcacagatgg
     1801 cattccaagt ttcaaggatt acaagttaag cgtaccaaac tttatcattt ggcaaataac
     1861 caaggtcctg ctctttggag cattctttac aaatatcatg tttggatttg ctctgattta
     1921 tctaatgaat ggtcacgacc taggtgttaa cagcgttgaa aaaatattct ctcttccttt
     1981 tgtaactcca tcaacagatc catcatacgc actaaataac gtcataccta tgattccggc
     2041 gctaaccgtt ctggtaccac cattgctggc tgtaattggt ttacgacttg ttctctatgt
     2101 aggtcttcat aacattgtta gggtaatcat aaattatatc caagattctt caaaaggaaa
     2161 accaaaattt ttggattatg tgtcaactat tgaaggaata attggtattg gtgtaatctg
     2221 ggccggattt aacatgtttt tcactgacca gatagattac aatacaaagt atcaaattgg
     2281 cggaacctta gcagcaggat ttgcgcttgt cgctttttat tttattgata aattcaagtc
     2341 aaaggtaatc atacatccat caaaacgtga cgtctacata cgcattctaa cattggccat
     2401 aatagcaatc attgctggtt ctataatggc tgttaacaac agcattgctg atgcaaaaaa
     2461 aatcgagttc ctcggtcctt acaaagctca acagataggg gtaaacaggt acttgggtca
     2521 actagaccaa gttcaagttg taccacatga agtatcgtta aactctattc caccaagcca
     2581 aattcctgat tatgttgcat caaatgatga gatgctaaat aaaataagag tatgggattg
     2641 ggatgcagca tttgcaaagc tgaaacctga aattggcctc atcccatatg ttgattttga
     2701 aactaacgat atcttgagat tcaatgatac cctgtattgg acagcttcta tgaaaccaat
     2761 acttccatct tcagtcagcc aagagaacat atggtataac caacatctag tttataccca
     2821 cgtcgataac ggttttctaa ccattaatgc acataatgga actatagtag atagtagcac
     2881 tctattcaaa cagagaataa tctattatgg tgaaggaggt ctcttttcag atacatggtc
     2941 tgcctatcca atggacagga cagtttccac agagctaaac aatgcatcat attcaggtac
     3001 aggaggacta accgtgaatc ctcctatcag tcagattttt gagccaaact ttttcgtatc
     3061 ctatcccacc gagccaattc acattatgcg ttatagagac attcatgaca gaatgcagtt
     3121 gttatatcca tattttcaat atgatttgtt tggaacacag gttgcctcac ttcctgtaac
     3181 agatggacaa aaaacctatt ggcttattcc gttgatagta ggatttgaca caaagaatgt
     3241 tccttggtcc gttagtaatc cataccttag actagttgga tacgcccttc ttgacgttta
     3301 caatggtaat atcactctgg tgaagacagg agatgacttt ttcacaaata tgtttgaaag
     3361 tcaatacgga gatcaatttg tggacatgcc accatggctt gccaaacaag tcagatatcc
     3421 agaagagttg tttaattgga aagtagacat gtttaacatc tatcacgtta cggaccccac
     3481 cacctttatt caagcaaata acttttacga ggtacctgat ggtattggga cttactatat
     3541 cgaagcaaaa ccacctggat ttgaaaagcc tacctatttg ggtcttctat cacttgaact
     3601 tcgaggatct cagggtagaa atctagctgg ttttatgacg gtacaaaacg atcttcctaa
     3661 tctaggaaat atggagtttt accaagtacc tcttgattct cagaccaaac ttttaggtcc
     3721 atcgtctgtt caagaggcac tgaacaagga ttctgacttt agacaattga aaacgttact
     3781 acaaaatcca aggataggcg acaacatatt gtacagaatt ggagatcaag atgtttactt
     3841 tattccagtc tatactgcag gagcaggtgg tgtagtaaca caattgggta cgattgcggc
     3901 tgtcggtgct gcatttaatg gtgattatta cgtagggttg ggtgatactc cacaacaggc
     3961 atttgcctca tatcttgcca agctttcggg tgttgcccca gctaatttta cttcgataat
     4021 atctcttgat gaagccacta ggatatctac tataaaatca atacttacag atgacaaact
     4081 aactgtagtt actcctacga caatacaatt gcctttgact tttaatgaag gcaatgtgtc
     4141 atttttgcag caatcagatc ttgacaatgt caagaagttg atctccaatt tcgtatcaga
     4201 atttattcaa cctaaatcag acagggttat cttttggcaa ggaaacaata cagtaaactt
     4261 gggaaccatt gttgtagttg acaacgtacc agaattacat tacatatcca taggagtagg
     4321 ataattgctt gttgttgtag acaatggttc tgtctacaca aaatcaattc tggattttct
     4381 taaaacaact ggcgttgact ttgataaact tctttttgat gaaatatcga tttctggttt
     4441 aaacaggtat tcatctatta tcttatcagg aagacgtcag aacaacccaa aaatgaatgc
     4501 cattaatgca aaaattatca gagatgccgt agaaaatcaa aaaccgcttc ttggaatctg
     4561 ctatggtgca gaaattcttg cacttacctt ggggggcaca attaagaaaa tggactcctc
     4621 acgccaaggc atttatcaaa ttgatgtaat aaaagacaac cctatttgta gcagaaaact
     4681 agatgcgttt gaaagtcatt catatatgat agcaaaactt gattcacaat ttattcaact
     4741 agccaagtca tcaagatgtg aatttgaaat ttttcaatta aatcatcaca acatatttgg
     4801 tacacaattc catcccgaga tgagtgatga tggaagaaca ctacttggaa aattcatatc
     4861 aattcaatag tattaatatg aaaagttaat tctcatcatt tatggaatct gctcatactc
     4921 tttcagttcc gcttgttgat gaagaaaaca tatgtctgcc acttgtcatt agtgcagttt
     4981 ccaaatattg ggaaatagat cttccacttg cagaggcaac tgagattgct caaaaatatt
     5041 caggaatgaa gggtagtata atgatagaag gagtcgagct tgcagaaagg catggtcttt
     5101 ctagcttgat tttgaattct tcattgaagg aacttagaaa aatgatagat attggaattc
     5161 caccaattgt aataatgcca ggactacgag atgtagtaca acatgcttca ctaattattg
     5221 gatacgatga aatcgaaaaa acaatcttcc attacattcc agagcctgat aagattggcg
     5281 ctatacccga aaaaaaattt gatgaacaat ggtcagaaga cgatagatta atgcttttac
     5341 ttgtcccctc tgacatacta aaagacatca acctacagag cgataacaaa gaaaaatcaa
     5401 atagattgtg ttttaatgca gaaaggttga gactgcaagg aagatcagaa gaagcaacac
     5461 atttactaaa aaaagctctt gaaatcaata aatctaattc aactgcagct tgcttacttg
     5521 ctggaattct caatgatctg aattcttcag atgcgctaaa atattacaaa atgagtacag
     5581 acctgaatcc cagatgttat cttgcctaca gaggattggg aaatttctat cttaaaatga
     5641 aagattacac aaaagcagag gaaaattata cag
//
LOCUS       DASPUS010000054         2895 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1676246, whole genome shotgun sequence.
ACCESSION   DASPUS010000054 DASPUS010000000
VERSION     DASPUS010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2895)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2895
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1676246"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1437)
                     /gene="metG"
                     /locus_tag="VEJ68_01250"
     CDS             complement(<1..1437)
                     /gene="metG"
                     /locus_tag="VEJ68_01250"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HXX05427.1"
                     /translation="MMKKAIITSALPYANGEIHLGHVASTYLPADITTRFLKLNGVEA
                     YYICASDDYGTPILIQAEKEKKSPEEYVKFWNKRDSEDFAAFGINFDFFYRTSSPENI
                     AFVQEIFKKLMQNGHIYEKEIIQFYCTTDKKFLPDRYVIGRCPYCHAEDQYSDLCEKC
                     GRVPQEIEDPKCSICKNPPVKEKTKHYFFKLTNFVNDLNKWLEADSHLQRDVKKYVQN
                     WIKDGLMDWDITRDITWGVPIPLDEAKGKVFYGWFDNHLAYISSAVKFLDGRGINGKE
                     FWNFADVYHFIGKDIVYHHYLFLPAMRIGIKEEYKLPDYIPTRGHLMLQSKKISKSRN
                     WYIGLKDFLGLYPADYLRFYLTLITPYSQDDLNFDWDAFASRINSELIGNIGNFVNRA
                     LGFTQKTLSGIVPTTNDLDETDKEAQDKIKNFAKELNQLMEENSLDKAIKKIIEFSAY
                     FNQYFQKKEPWKGAKDFNNCIFISVNAVH"
     gene            complement(1465..2706)
                     /locus_tag="VEJ68_01255"
     CDS             complement(1465..2706)
                     /locus_tag="VEJ68_01255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HXX05428.1"
                     /translation="MSQIKDPSLAEKGKMSYEWARDHMKILTNTIQRLKKSQPLKGIK
                     LGICLHITKETSVLLMGAKALGADVSACGANPLSTQDDIAAFLAENGVHIYAWEGQTT
                     EEYDWCIEQMLSHKPQILTDDGSDCHSKIHGGSKFSSWKILGGTEETTTGVIRLKALE
                     KQKKLKYPVIAVNDAYTKHMFDNRYGTGQSTIDGYFRSMNLLFAGKRVVVAGYGWVGR
                     GVASRANGLGAKVYVTEIDPVRALEAHMDGYEVLPMAEAATVGDIFITATGQTGVIRK
                     EHIIKMKDGAILGNVGHFDVEVDAKFLLNESKYVKEVRPNLDECMLRNGKRVYLIGKG
                     RIANLVAAEGHPPEVMAQSFSNQLLSMIFIAKNHKKIGKRVITVPAEIDKQIAVDALG
                     AMDVAIDKPTAAQIKYAQSWA"
BASE COUNT          834 a          573 c          497 g          991 t
ORIGIN      
        1 gtggactgca tttactgaga taaagataca gttattgaaa tcttttgctc ctttccatgg
       61 ctcttttttc tgaaagtatt gattaaagta agcagaaaat tcaattatct ttttaattgc
      121 cttgtccaaa ctattttctt ccataagttg gttcaattct ttggcaaaat tctttatctt
      181 atcttgggcc tctttgtcag tctcatcaag atcatttgtt gttggtacta tccctgacaa
      241 ggtcttttga gtaaaaccaa gagcacgatt tacaaagtta ccgatgtttc ctataagctc
      301 agaatttatt cgagatgcaa atgcatccca atcaaaatta agatcatctt gactgtatgg
      361 agtaataaga gtaagataaa atctcaaata atcagcagga tacaagccaa gaaagtcttt
      421 gagcccaatg taccaattac gactctttga aatttttttg gattggagca ttaaatgacc
      481 acgtgtagga atataatccg gaagtttgta ttcttctttt atcccaattc gcattgctgg
      541 taagaataga tagtgatgat acacgatatc tttgccaatg aaatgatata cgtcagcaaa
      601 gttccagaat tctttaccat ttattcccct tccatcaaga aattttactg cagaagatat
      661 gtatgccaaa tgattatcaa accaaccata aaagacctta cctttggctt catctagagg
      721 tattggtacg ccccaagtta tatctcgggt aatgtcccaa tccatcaacc catcttttat
      781 ccagttttgt acatattttt ttacgtctcg ttggaggtga gagtctgcct ccaaccattt
      841 gttcagatca ttcacaaagt ttgtgagttt gaaaaaataa tgtttagttt tttctttgac
      901 aggcggattc ttacaaattg agcatttagg atcctcgatt tcttgaggta ctcttccaca
      961 tttttcacaa aggtcagaat attgatcttc cgcatggcag taagggcatc tacctatcac
     1021 atatctatct ggcaagaatt tcttgtcagt tgtacaataa aactggatga tttctttctc
     1081 gtaaatatgt ccattttgca tcaatttttt gaatatttcc tgcacaaaag caatattttc
     1141 aggagaactt gttctgtaaa aaaaatcaaa gtttattcca aaagcagcaa aatcctcaga
     1201 atctcttttg ttccagaatt tcacatattc ttcaggagat tttttttctt tttcggcttg
     1261 tattaagatt ggagtcccat aatcatcaga tgcacatatg taatatgctt cgaccccgtt
     1321 tagtttgaga aatcgtgtag taatgtcagc agggagatat gttgatgcaa catgacccag
     1381 atgtatctca ccattagcat aaggcagagc acttgttatg attgcctttt tcattatctg
     1441 agtaaaggtt gtacgtgatt taagctatgc ccaactctga gcatatttta tttgagctgc
     1501 agtgggcttg tcaattgcga cgtccattgc gccaagcgca tctactgcaa tctgtttatc
     1561 tatttcagca ggtacggtga ttactctttt tcctatcttt ttgtgattct ttgcaatgaa
     1621 tatcattgac aataattgat tagaaaatga ctgggccatt acctcaggtg gatgcccttc
     1681 tgctgcaacc aaatttgcaa ttcttccttt tccgataaga taaacacgct tgccatttct
     1741 gagcatacat tcatccagat ttgggcgaac ttcttttaca tatttagatt catttaaaag
     1801 aaattttgca tcaacttcaa catcaaagtg tcctacgttt ccaagaattg caccatcttt
     1861 catcttaata atgtgctctt ttcttatgac accggtttgt ccagtagcag ttatgaatat
     1921 gtcaccaaca gttgcagctt ctgccattgg tagtacctca tatccatcca tgtgcgcttc
     1981 gagtgctctc acaggatcga tttcagttac atacacttta gcaccaagac cgttagctct
     2041 ggaggctact cctcttccta cccacccata acctgcaaca acaactcgtt tacctgcaaa
     2101 aagaagattc attgatctaa agtagccatc aattgtgctc tgtcctgtgc cgtatctgtt
     2161 atcaaacata tgtttggtat acgcgtcgtt aacagcaatt acaggatact ttagtttttt
     2221 ttgcttttct agagccttga gtcgaataac tcccgtggtg gtttcttcag tcccacctaa
     2281 aattttccat gatgagaatt tggaaccacc atgaattttg ctatgacaat cggaaccatc
     2341 atctgtaaga atctgaggtt tatgactaag catctgttct atacaccaat catattcttc
     2401 agttgtttgt ccttcccaag catatatgtg gactccattt tctgcaagaa aagctgcaat
     2461 atcatcctgt gtcgaaagcg ggttagcacc acaggcgctt acatctgcgc ccaaggcttt
     2521 tgcacccatt aataaaacgg atgtttcttt ggtaatgtgc aaacaaattc ccaattttat
     2581 tcctttgagt ggttgtgatt tttttagacg ttgtatagta tttgttagga tcttcatatg
     2641 atctcgtgcc cattcatagg acatcttacc tttttctgcc agactgggat cttttatctg
     2701 actcatacga tttgtgaaat tacagggcta taaaatacta tcacaaatga taatctaaat
     2761 attagatctt ttttagaaga aaatacatgg tatggagaaa gattgctgaa aaagatgaga
     2821 tagaacctgg aaaaggtaaa gagttcaatg tggatggcaa gcgtattgca atattcaacc
     2881 aaaacggatt tcatg
//
LOCUS       DASPUS010000055         3722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_712836, whole genome shotgun sequence.
ACCESSION   DASPUS010000055 DASPUS010000000
VERSION     DASPUS010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3722)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3722
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_712836"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..688
                     /locus_tag="VEJ68_01260"
     CDS             <1..688
                     /locus_tag="VEJ68_01260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HXX05429.1"
                     /translation="PASNSDIVTLMLKKSIDGAWVPEPWVTTLVHQANGKIFLDERSL
                     WKNGKFVTGQIIVRPEFLSAHPDVIKKFLEANVDEINWINSNPDQARQSFNTEYQTLT
                     TKTIPDDQLKEAFSRLDITYDPIVSSLYKSADDQYEVGFLDSKPDLSGIYDLTLLNQV
                     LEEKGLQQISLDVNASAQNNTSQQSNPTPTQNASSVVPEFGPVTPIVFAVAVMGIVVY
                     AAKTRVILRL"
     gene            complement(1298..2422)
                     /locus_tag="VEJ68_01265"
     CDS             complement(1298..2422)
                     /locus_tag="VEJ68_01265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05430.1"
                     /translation="MKNEFVMLMIILPTIVLLLTMNNAGIVFSQTANQAATSNIVNYK
                     IPLWVKNNAGWWANGTIGDQDFLKGIEYLINQTIIVIPPTNQLTTNASYQEIPVWIKH
                     NAGWWANGTIGDQDFVKGMEFLIANEIIHVNMQNNNQCPSGQYFDALSNACVSTAEKQ
                     LLLHIFSPHNPPELLAIFDRHTTPNDFISSFQTQPLDLYPKLNHALSGYSMDSINAAI
                     ETAKSHGNIKYIAYDNEKNNGNLSTPSTELLDPSASTNEAASLAKQAGLGFAAEPTHD
                     LLMQEYKGVDWAKVDFMVMQMQHYTTNDASFISDVTTVSDWIKSKNPNTIIFVQFNTA
                     FDTIPHLISLTKSVSSKIDGVSVVIPDPATVEPLLVGIGR"
     gene            complement(2777..3181)
                     /locus_tag="VEJ68_01270"
     CDS             complement(2777..3181)
                     /locus_tag="VEJ68_01270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014966060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding domain-containing protein"
                     /protein_id="HXX05431.1"
                     /translation="MKNPEIACKIEAYGAVNPSENPEKVKLAISNVIPDADYEYKDGS
                     IKATSRNLHSLSNIQKTIQSRRVNRVYRRQMRFNTKGDTTWFYLNKQAAFVNVIAICD
                     VAEESPMGPIKVILHSQDIERVIDWLAPEFVE"
     gene            complement(3178..>3722)
                     /locus_tag="VEJ68_01275"
     CDS             complement(3178..>3722)
                     /locus_tag="VEJ68_01275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HXX05432.1"
                     /translation="KLIVCLTGMPGAGKTTIAEALKSKGFDKITMGDAVRAEATRRKI
                     EPTGANLGKLMLELREKNGPGAVAELIKNDIVNSRSDVILVDGVRSLAEVDVLKKIGT
                     VKVLAIHASGDTRFRYLTGRGRSDAPADRGDFAKRDSREIGVGMSESIALADETISNN
                     NLTIEQLINTAYDIIKGWLK"
BASE COUNT         1042 a          722 c          719 g         1239 t
ORIGIN      
        1 accagcttca aactctgata ttgtaaccct aatgctaaag aagagcatcg acggtgcatg
       61 ggtgccagaa ccatgggtta caacacttgt tcaccaagct aatggaaaga tctttcttga
      121 tgagagaagt ctttggaaaa atggcaagtt tgtcacagga caaataatag ttagaccaga
      181 gttcctgagt gcacatcctg atgtgataaa aaaattcctt gaggcaaatg tagatgaaat
      241 aaattggatt aacagcaatc ccgatcaagc acgccaatct ttcaacacag aatatcagac
      301 attaactaca aagaccatac cagacgatca attgaaagag gcattttcca gactggacat
      361 cacatatgat ccaattgtgt catctctgta caaatcagca gatgatcagt atgaggtagg
      421 atttcttgat tccaagcccg acttgtctgg aatatatgac ttgacacttc taaatcaagt
      481 attggaagaa aagggattgc aacagatttc tttggatgtg aatgcgtcag cacaaaataa
      541 tacttcccaa cagtctaatc caactccgac tcaaaatgca agtagtgttg tgccagaatt
      601 cggtcctgtt acgccaattg tttttgcagt tgccgtaatg ggaattgtag tgtatgctgc
      661 aaagactagg gtcattctac gactctgatc ctctttttta tttatactag attgcaaatt
      721 ttttctggga ttatatggaa aatcaagaat tgacttattt gtattgaact ctatttcaca
      781 aatagatctc ataaaagcaa tcagttggtt gctcaatgtt cttgaaccac atttagcaga
      841 tacaaattca tcgtttttct gtaaacttaa gccgtctttt tgtttggttg tatttagatc
      901 ttttgctgtc cgtcatgatc ttgcaggaca gacatcaata caaataattt gtcatcgcaa
      961 atacaccatg atgaagataa accaaattaa atcgtatggt gattccaaaa ctgccaaaat
     1021 tgcaagtgaa tttctaaaag ctataactca cactccatgc acgaaaagag ttcttgtgca
     1081 ttttaaattc aaaagaagta ggatcgagta tcgtgagtgg gtaactaata gacaatatat
     1141 cgctctaagc acaatgcagt gtattgaatt ttgcaacgtt caggattagt aggacaaatg
     1201 acagaattct attctgaaac tgcaagagat ctggtttgga ttcactaaat tatttagata
     1261 aaagttttgc ctgagttgta tctttttcat cattttatca tcttccaatt ccaacaagta
     1321 gtggttcaac cgttgcagga tctggtatca ccacagatac cccatcaatt ttgcttgaaa
     1381 ccgattttgt tagtgatatt aggtgtggta tggtatcaaa tgcggtattg aactggacaa
     1441 atattatggt atttggattt ttagacttta tccaatccga tacggttgtt acatctgaaa
     1501 taaatgatgc atcatttgtt gtgtaatgct gcatttgcat taccatgaaa tctacctttg
     1561 cccagtctac tcccttgtat tcctgcatga gtaggtcatg tgtgggttct gctgcaaatc
     1621 ccaatcccgc ttgtttggcc aagcttgctg cttcatttgt tgatgcgctt ggatctagca
     1681 gctctgtaga aggagttgaa agatttccgt tatttttttc attatcataa gcaatgtatt
     1741 tgatgttacc atgacttttt gctgtttcaa tagcggcgtt tatcgaatcc atggaatagc
     1801 cgctaagagc atgattcagc ttggggtaaa gatccaaagg ttgagtttga aagctggaaa
     1861 taaaatcatt tggggttgta tgcctgtcaa atattgctag taactccggt gggttgtggg
     1921 gtgagaatat gtggagtaag agttgttttt ctgcggtgga tacgcaagca tttgagagtg
     1981 catcaaagta ctggcctgaa ggacattgat tgttattctg catatttaca tgaattatct
     2041 cgtttgcgat cagaaattcc attcccttta cgaaatcttg atctcctatc gtaccgtttg
     2101 cccaccaccc agcattgtgt tttatccaga ctggaatctc ttggtaagaa gcattcgttg
     2161 ttaattggtt agtaggaggg attactataa tggtttgatt aattagatat tctatacctt
     2221 ttagaaaatc ttgatctcct atcgtaccgt ttgcccacca cccagcattg ttttttaccc
     2281 atagcggaat tttgtaattt acgatattac ttgtggcagc ttggttggca gtttgcgaga
     2341 atactatgcc agcattgttc atagtcaaga gtaagacgat tgttggtaga attatcatta
     2401 gcattacaaa ttcgtttttc atagaactgc tcctttgggt cggtcaaaaa ggattgctta
     2461 acttagttca tttggtctga caattctaga gatttgcata taatttgtac ttgattttga
     2521 aatatcacta aataacttta ttataaaagg cgaggtatgc gaacaaaatc agttctcata
     2581 gcatcattga tagcatctgt tgccttgctg gctccttggt atttctaaag ataacatggc
     2641 agtagataca gtctaaacat tatcttataa ccattacttg gagatgcatt ctacctttga
     2701 taggcaatac aatagtagct gaaaatccaa gggattttaa ataattcagc acgatcttac
     2761 aaataataaa attcatctat tctacaaact ctggcgcaag ccagtcaatc actcgctcta
     2821 tgtcttgaga gtgcaagatt accttgattg ggcccattgg ggattcctct gcaacatcgc
     2881 atattgcaat tacattgaca aaagcagctt gtttgttgag gtaaaaccaa gtagtatcgc
     2941 cttttgtgtt gaacctcatc tgtcttcggt acaccctgtt tacccggcgg ctttgtatgg
     3001 tcttttgaat attagaaagg gaatgtaaat ttctagaggt agcctttatg cttccgtcct
     3061 tgtactcata atcggcatca ggtattacat ttgatatggc aagctttacc ttttctgggt
     3121 tctctgatgg attgactgcg ccgtatgctt ctatcttgca tgctatctct ggattcttca
     3181 ctttagccaa cctttgatga tatcatatgc agtgttgatt agctgttcaa ttgtcaggtt
     3241 gttgtttgat atcgtttcgt cagccagcgc gatcgattca ctcattccaa cgccaatctc
     3301 tctagaatct ctttttgcaa aatcaccacg gtctgctgga gcatcagatc ttccgcgtcc
     3361 tgtcaagtat ctgaatctgg tatctccaga tgcatgtatt gcaagcacct tgacagttcc
     3421 tatttttttt aagacatcta cttctgcaag tgatcttacg ccatcaacta gtatgacatc
     3481 tgatcttgaa tttacaatgt catttttaat cagctcagcc acggcgccgg gtccattttt
     3541 ttctcgcagc tctagcatga gcttgcccaa gtttgcaccc gtgggttcta tctttctcct
     3601 tgtcgcttct gcccttacag catctcccat tgttatcttg tcaaagccct ttgattttag
     3661 agcctcagct attgtggtct ttccagcccc tggcattcca gtcaaacaaa caataagctt
     3721 tg
//
LOCUS       DASPUS010000056         3287 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_987540, whole genome shotgun sequence.
ACCESSION   DASPUS010000056 DASPUS010000000
VERSION     DASPUS010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3287)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3287
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_987540"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..76
                     /locus_tag="VEJ68_01280"
     tRNA            3..76
                     /locus_tag="VEJ68_01280"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:38..40,aa:Gly,seq:tcc)
     gene            complement(87..1229)
                     /locus_tag="VEJ68_01285"
     CDS             complement(87..1229)
                     /locus_tag="VEJ68_01285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05433.1"
                     /translation="MKYLGIITAVLLFTNCVSASAIYEPPSSQEIDLFNSLLSQFEKL
                     DVPIKDVSDVIRTFQQPLIVSFPCNANDTNNFVVTVVSTRLSKFDQTLVHQDIVTGGV
                     YTWNCQVTTEDGKITIQCNNEIRLNPELLLNGTGLDPRVHQIENLVILYHELLHGQLM
                     IDAIKSSLAWKEEVCNKPINGTIDYSFADPNHKNINPLQTLFASELVDLDGGKMITKE
                     ITPQETQNGTFSVEILNLSNYPQFGNEAEVNLRGSNIQNTKFSSTGPDVFLTGNLLNK
                     TQSGIAWFYIFGNQTSEEPLNKSIPVWAKRTTGLWASGTAYDGNFSSVLQYLIEQKIV
                     NVNNWKDQGKIPSWFKKTANWWFEGEIDDLTFVKSIQYLISAGIIS"
     gene            complement(1255..2388)
                     /locus_tag="VEJ68_01290"
     CDS             complement(1255..2388)
                     /locus_tag="VEJ68_01290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05434.1"
                     /translation="MNRKTIGIAAGVAAAVIVAVLFFVMQSQPQNPIQPPSQNQTQIQ
                     TTQNPKIGLVIWPPSERPTVNDLHDAFLQAAPTGIGRSNVYISWPSIEPQQGQYNWKI
                     YDIIMGMNREQHLDVTLYFSIINNEAFGPFPSWLGTPNLDQNLANETANTLDSILSRY
                     YIVDYVIIGGNIDSYFKDHPKDIPKYVDFFNSVYTKVKEKHPNVKLGNWFSLNNVVTK
                     YEGDLVGNLTQGDFVAYSYAPVDLTYYENNSPDVEGQNLQKMLDYAGGKKIGLVEVGW
                     ATDKAINGTKDDQVKFMKIVFDFYRKNQSQFDFLTWYRQYDRPFDTCYSGLNTNVQTG
                     FDAQILMNNTATYLCGAGLVDINKNPKPAWDEFTRQIAMTPNS"
     gene            complement(2445..>3287)
                     /locus_tag="VEJ68_01295"
     CDS             complement(2445..>3287)
                     /locus_tag="VEJ68_01295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016939417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase,
                     adenosylcobalamin-dependent"
                     /protein_id="HXX05435.1"
                     /translation="KIPIAGYYEKPKSARTYDWDALIAKIQKHGIRNVLTTTVAPTGT
                     LSMIADCSNGMEPMFALVFEKRVTVGRFFYTNKIFEAVLKEHGLYNDQILEKIANNYG
                     SVKGIAEIPEWMQKIFVTAMDIHWADHLMAQGVWQRWIGNAIAKTINMPSDVSSDDVK
                     AAYLLAHELGLKGITVFRDGSRHEQVLHMTGDKVEKTFQVTSSAYVTDYISKNITNAY
                     LKSQVERALQIKIPEAGIAQPQPKLTPEQMEELLCPTCKNNLVFAEGCNICIECGYSG
                     CTSG"
BASE COUNT          923 a          617 c          580 g         1167 t
ORIGIN      
        1 gagcggtcgt agtatagttt ggttagtaca ctggccttcc aagcccgtta cccgggttca
       61 aatcccggcg accgcattgt attgttttaa gaaattattc cagccgaaat tagatattga
      121 atggatttaa caaatgtgag atcatctatt tctccttcaa accaccaatt tgcagttttc
      181 ttaaaccaac ttggaatttt cccctgatct ttccaattgt ttacatttac aattttttgt
      241 tcaataagat attggagtac gctagaaaaa ttgccgtcgt atgcagtacc agatgcccat
      301 agaccggtag ttctcttggc ccatactgga atggatttgt ttaatggttc ttcacttgtc
      361 tgattgccaa aaatataaaa ccatgctatt cccgactgag tcttgtttag aaggtttcct
      421 gtaagaaaaa cgtcaggtcc tgtagatgaa aattttgtat tttggatatt ggaccctcgt
      481 aggtttacct cagcctcatt tccaaattgt ggataatttg aaagattgag tatttctact
      541 gaaaatgtgc cattttgtgt ttcttgaggt gttatttctt ttgtaatcat ttttcctcca
      601 tctaaatcta caagctcaga tgcaaacaga gtctgtaatg gattgatgtt tttgtggttt
      661 ggatcagcaa atgaataatc aatagttcca tttatcggtt tgttgcaaac ctcttctttc
      721 caagctagag atgattttat tgcgtcaatc ataagctgac catgtaatag ctcatgatat
      781 agaattacca agttctctat ttgatgtact cgtggatcta atccagtccc atttaacaaa
      841 agttccggat ttagtcttat ctcattatta cattgaattg ttatcttacc atcttctgtt
      901 gttacctgac aattccaagt atatacacca cctgtaacaa tatcctggtg aactaaagtt
      961 tgatcaaatt tagataatct tgtactaact actgttacga caaaattgtt tgtatcgtta
     1021 gcattgcatg gaaaactaac gattagtggt tgttgaaatg tccttattac atcagatacg
     1081 tcttttattg gaacatcaag tttttcaaat tggctaagca atgaattgaa aagatcaatc
     1141 tcttggctac taggtggctc atatattgca gaagctgaga cacagtttgt aaaaagtaga
     1201 accgcggtaa ttataccaag atatttcaaa ctatgacatt cacttttttt atactcaaga
     1261 attaggtgtc attgctatct gcctcgtaaa ttcatcccaa gcaggttttg gatttttgtt
     1321 gatatcaacc aaacctgctc cacaaagata tgttgcagta ttattcatga gtatttgcgc
     1381 atcaaatccc gtttgtacat ttgtgtttaa accggaataa caagtatcaa atggtctatc
     1441 atattgccta taccaagtta agaaatcaaa ttgtgattgg ttcttcctat aaaagtcaaa
     1501 tacaattttc ataaatttga cttggtcatc ttttgttcca ttgattgctt tgtcagtagc
     1561 ccatccaacc tccaccagac ctattttctt cccacccgca taatctaaca ttttctgaag
     1621 attctgtcct tctacatcag gactattatt ttcatagtaa gtcaagtcaa ctggagcata
     1681 agaataagcc acaaaatctc cttgggtaag atttcctacc aagtcgcctt cgtatttggt
     1741 tactacgtta tttagcgaga accaatttcc aagctttacg tttggatgtt tttctttgac
     1801 tttggtatag acactgttaa aaaagtctac atattttgga atatcttttg gatgatcttt
     1861 aaagtaagaa tcaatgtttc cgcctatgat tacataatcg acgatatagt atcgggataa
     1921 aattgaatcc aaagtatttg cagtctcgtt tgctagattt tgatcaagat ttggtgtccc
     1981 tagccaactt ggaaaaggtc caaaggcttc attgtttatt attgagaaat atagtgtaac
     2041 atcgagatgt tgttctctgt tcattcccat aataatatca taaattttcc aattgtattg
     2101 gccttgttgt ggttcaatag atggccatga aatgtagaca ttgcttctgc caatacctgt
     2161 tggtgctgct tgtaggaatg catcatgcag atcattgacc gtgggtcgtt cagatggtgg
     2221 ccatataact aggccaattt ttgggttttg agtagtttga atttgtgttt gattttgtga
     2281 tggtggttgt attggatttt gtggttgtga ctgcattaca aaaaataaaa ctgcaactat
     2341 aactgcagcc gcaacacctg ctgcaatacc aatagtcttt ctgttcaacg ctatcttgag
     2401 tatattatga tactaaaaga gttttgattt gaagaataag ttatctatcc agaagtacaa
     2461 ccactgtatc cgcattcaat acaaatattg caaccttctg caaacacaag attattcttg
     2521 catgtaggac atagtagttc ttccatttgt tccggtgtta gttttggttg tggttgcgca
     2581 ataccagctt ctgggatctt tatctgaagt gctctttcta cttgagattt tagatatgca
     2641 tttgtgatat tctttgagat gtaatcagta acatatgcac ttgatgtaac ttggaatgtc
     2701 ttttccacct tgtctcctgt catgtgaagt acttgttcat gtcttgaacc atctctgaat
     2761 acggtaattc ctttcaatcc aagctcgtgt gctaacagat atgcagcttt tacatcgtca
     2821 gaagatacat cacttggcat attgatagtc ttggcaattg catttccaat ccacctctgc
     2881 caaactcctt gagccataag atgatcagcc caatgaatat ccattgctgt tacgaatatc
     2941 ttctgcatcc attctggaat ctctgctatt ccctttacag aaccatagtt attggcaatc
     3001 ttctctagta tctggtcatt gtacagaccg tgttccttga gaactgcttc aaaaatcttg
     3061 tttgtataga agaatctgcc tactgtcact cgtttttcaa agactagtgc aaacatgggc
     3121 tccattccat tagaacaatc agcaatcata gatagtgttc cagttggagc tacagtagta
     3181 gtaagaacat ttctgatacc atgtttttgg atctttgcta taagagcatc ccagtcatat
     3241 gtacgagcac tctttggttt ttcatagtat cctgctatag ggatctt
//
LOCUS       DASPUS010000057         3145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1677540, whole genome shotgun sequence.
ACCESSION   DASPUS010000057 DASPUS010000000
VERSION     DASPUS010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3145)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3145
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1677540"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            213..785
                     /locus_tag="VEJ68_01300"
     CDS             213..785
                     /locus_tag="VEJ68_01300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05436.1"
                     /translation="MVKKKEKPHEKEQPATSGNGFKHRNKLIAIGIIAAVVAGIAFYA
                     HKADNTVVTTFSLIDGIPCETQEYGTFHIHAHLDVFVDGHAYPVPALIGIEDNTCLYW
                     LHTHNTDGIMHIEAPQTQDFTLSQFFDIWKSTGSTPPPTSGDPIIYVNGQVVSTTLST
                     TKLNAHDEVVLVYGNPPPNIPSFYQFPEGL"
     gene            885..1352
                     /locus_tag="VEJ68_01305"
     CDS             885..1352
                     /locus_tag="VEJ68_01305"
                     /inference="COORDINATES: protein motif:HMM:NF024304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HXX05437.1"
                     /translation="MKINNAIPGFGKQLSEQQVREFLEISKLNLQLGTIDEKGDPNIH
                     PIWYVYQNNKLYVVTPKKSRKAQNALRQKTVYFSIDDESFPYKGVKGKGSVRLLEDVD
                     SNVETAKKIITKYMGGIENDLGRWIINEIKQENEAVLEIEPKFYSAWSFSQIK"
     gene            complement(1689..2123)
                     /locus_tag="VEJ68_01310"
     CDS             complement(1689..2123)
                     /locus_tag="VEJ68_01310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05438.1"
                     /translation="MQALLLDRNRYSLMMNCTLKVTWSEKVEYNTKNAKSIPSYAGVY
                     EIQGRKKTDGGYTRRFIGVSSNLQEAFSKHLSEIEANDQLKQFLKDKKSFFRYVKISD
                     ELLRKDLQRGLYHKHRHSFVDNNNPPSGSGKYSKISVEENNA"
     gene            2249..2380
                     /locus_tag="VEJ68_01315"
     CDS             2249..2380
                     /locus_tag="VEJ68_01315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05439.1"
                     /translation="MKAKFKTTCSECNSPIKAGEEITKIPSGKWVHKYCAPESNELP"
     gene            complement(2437..2715)
                     /locus_tag="VEJ68_01320"
     CDS             complement(2437..2715)
                     /locus_tag="VEJ68_01320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05440.1"
                     /translation="MDQKKKKQLNKFALLVILMIAIPEIVGHLYFEGQKHPPTSSIDA
                     ALSLTNKQHSMYLNSDSRCHLILKNDTSATNVSRASGVQGQYAIYSCT"
     gene            complement(2838..>3145)
                     /locus_tag="VEJ68_01325"
     CDS             complement(2838..>3145)
                     /locus_tag="VEJ68_01325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HXX05441.1"
                     /translation="EFIKMSGCEFLQLPSNPTDTKAILEKCLKAEQGALVNWNKVCKM
                     TYDKDPATYDVAKDILREEIEHEAWFLELLYGRPSGHMRRKFPGERPHTQKHSRSLG"
BASE COUNT          997 a          555 c          551 g         1042 t
ORIGIN      
        1 aatgaaagaa aaaaaagaag agaaataaaa atcgcgatag atattgctat gtatctgtga
       61 tttgaaaaga ctatcgttag ggcctgtttt tgcaaactag gtaaattagg tagtaggaat
      121 tatttaattc cagctatcca aatacctaca aaacaatttg taagtgggtt aaaatatgga
      181 cttttgttat atccgctaga gctctctgaa atatggtcaa aaagaaagaa aagccccacg
      241 agaaagaaca gcctgcaact agtggaaatg gtttcaaaca tagaaataag ttaattgcaa
      301 tagggattat tgccgcagtc gttgcaggaa ttgcatttta tgctcataaa gctgataaca
      361 ctgtagtgac aactttttct ttaatagacg gaataccttg tgaaacacaa gaatatggta
      421 cgtttcacat acatgcccat ttggatgtct ttgttgatgg tcatgcttat ccagtgccag
      481 cattaattgg tattgaggat aacacgtgcc tgtattggtt gcacactcat aatactgacg
      541 gcataatgca tatagaagca ccccagactc aagatttcac tttgtcacaa ttcttcgata
      601 tttggaaatc cactggtagc actcctcccc ccacaagcgg cgacccaatt atatacgtaa
      661 atggtcaagt cgtctctacc acactatcta ccactaaact taatgcacat gatgaagtgg
      721 tgttggtata tggaaaccct ccgcctaaca taccgtcatt ttatcaattt ccggaaggtc
      781 tgtagttcac tatacaatca atgaatgaaa aaattagtgc acaagtacaa attcaaattt
      841 aacttatcat aaactgtttt aaactatttt atagttaact aggtgtgaaa atcaataacg
      901 caattcctgg ctttggcaaa caattgagcg aacaacaagt aagagaattt cttgaaatat
      961 cgaaactgaa cctgcaatta ggtacaattg atgagaaagg ggatcctaat atccatccaa
     1021 tctggtacgt ttatcaaaat aacaaactgt atgtggtaac tccaaaaaag tcaagaaagg
     1081 cacaaaacgc attacgacaa aaaacagtat atttttccat cgatgatgaa tcttttccat
     1141 ataaaggagt caagggtaaa ggctcagttc gactcctcga ggatgtggat tcaaacgtgg
     1201 aaacggcaaa gaagatcatc acaaaataca tgggaggaat tgaaaatgat cttgggagat
     1261 ggattatcaa tgagataaaa caagaaaacg aagctgtcct tgagattgag cccaaattct
     1321 attctgcatg gtcattttca cagattaaat aatttttgag atacaacaca acaaaaagtt
     1381 attcatcaca cgaattcatc atatggagta atgctgatct ttttgttttt tcaacttttt
     1441 gttttttatc gtgcccttta tggaaaatgg ttctccggaa tacctagctt ggattttgta
     1501 tgtctacaga taaactaggt cttgattctg tattgaactt agtctggatt agggaatgct
     1561 ttacaggctg cgaatcaaag aatcctttta ccaaacactc tgactggaca tttgtcacaa
     1621 atgttccatc aggaactacg tttacctttg cattaaaatc atttaggata ttgtatgtga
     1681 tattatactt atgcgttatt ttcttctacg cttatctttg aatatttgcc agaaccagag
     1741 ggaggattgt tattatcaac aaaactatgt ctatgtttgt gatatagtcc tctttgcaaa
     1801 tcttttctta gcaattcatc acttatcttg acatatctaa aaaatgattt tttatctttc
     1861 aaaaattgtt ttaattgatc atttgcttca atttcggaga gatgttttga gaatgcttct
     1921 tgaagattac tgctgactcc aataaatcgt ctagtatatc caccatctgt cttctttctt
     1981 ccttggatct catatacacc tgcgtaagat ggaatggatt ttgcattttt agtattgtat
     2041 tctacctttt cggaccaagt tacctttaga gtacaattca tcattaatga atatcgattt
     2101 ctatctaata aaagggcttg cattcatatg aatcaagttt gattctacag aaataatttt
     2161 tgatctactt gaaatctatt ttatcatttt attctaaaca tgttccacat atcttctagt
     2221 ttatctatgt ctgatgtttt caaagattat gaaagcaaag ttcaagacga cttgttcaga
     2281 atgcaattct ccaattaagg ctggagaaga gattacaaag attccatcag gaaaatgggt
     2341 tcacaaatat tgtgctcctg aatccaatga attgccttga tagtcgtaaa tgtaacaatg
     2401 gcatctaagt ttcatgacat tgtactgcaa ccaagtctat gtgcatgaat aaatagcata
     2461 ttgtccttgc actccggatg ccctgctcac gtttgttgcg gatgtgtcat ttttaagaat
     2521 aagatggcat cgagagtcac tattaagata catgctgtgc tgtttattgg ttaatgatag
     2581 tgcagcatca atagaagaag tgggtggatg cttttgaccc tcaaaataaa gatgaccaac
     2641 aatttctggt attgctatca tcagtattac aagaagggca aatttgttta gttgtttttt
     2701 ctttttttgg tccaagaaga tctttgattt ttatctaaga tatattaaga tacaacaaaa
     2761 tctcgatctt gatttcgggc gttattcgta atcttctata tttatcacgt tattccaaaa
     2821 ggagtgtgtc tttgtagcta acccaatgat cttgaatgtt tttgagtatg cggtctttca
     2881 cctggaaatt tccttctcat gtgaccagag ggccttccat acaataattc caaaaaccaa
     2941 gcttcatgtt ctatctcttc cctaagtatg tcttttgcta catcataggt cgcaggatct
     3001 ttgtcgtaag tcattttaca aaccttattc caatttacta gggcgccttg ctcagccttt
     3061 aggcattttt ccaagattgc cttagtatca gttggatttg atggtaactg taaaaactcg
     3121 cagcctgaca tcttgataaa ttcct
//
LOCUS       DASPUS010000058         2698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1261691, whole genome shotgun sequence.
ACCESSION   DASPUS010000058 DASPUS010000000
VERSION     DASPUS010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2698)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2698
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1261691"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..210)
                     /locus_tag="VEJ68_01330"
     CDS             complement(<1..210)
                     /locus_tag="VEJ68_01330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(56)-2'-O)-methyltransferase"
                     /protein_id="HXX05442.1"
                     /translation="MRIEVLRIGQRLVRDDRVTTHVALVSRAFGASKILMYDANPEIK
                     DTISKVNKIWGSDFRVEIIENWKEVI"
     gene            complement(220..1305)
                     /gene="hflX"
                     /locus_tag="VEJ68_01335"
     CDS             complement(220..1305)
                     /gene="hflX"
                     /locus_tag="VEJ68_01335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HXX05443.1"
                     /translation="MRDSAILIAYDKEDVVRESIALCESAGYDIRKIIRQKFLNKSKF
                     GIGEGKVDELKDLVSSIKPDVLIYDEILKPSQNYNLASTLKIKILDREMLILEIFERR
                     ARSSESTLQVKLAQLRYEMSRAKEKVRLAKMGEQPGFMGIGKFEVDVYQNDIKNRMNN
                     VKSKLLKSSKQRALHREARKRVGFKTVSLAGYTSAGKTTLFNTLTGEEKEESPKLFTT
                     LSTTTRKIILQNVEVLISDTVGFISKLPAYMIEAFKSTLEELNYADTVIVVIDISDPI
                     LELKKKFRSCITTLDGIGVNQDKIIFALNKSDLVNEEEILDKVDQLGLKENKKWLQVS
                     AVTGQNIPALKDLVYHALQNQPISIEK"
     gene            complement(1331..2374)
                     /locus_tag="VEJ68_01340"
     CDS             complement(1331..2374)
                     /locus_tag="VEJ68_01340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010192076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate uptake regulator PhoU"
                     /protein_id="HXX05444.1"
                     /translation="MGNIEEMRKIQFTGKSSYIVSLPKQWVADMGLKQGDQVSVMRQG
                     ISTLQIVPLKHHNKPVNTEDATIEIKQDDEDAVIIRKLISLYLLGFNIINVKPKLGRL
                     NPSQRNAVKEAVKGILMGTEIIADSTEGITIQVLINLFELSVDGALKRMLIIAKSMQN
                     DALLALGEANFDLGKEVINSDDEVDRFSFYIIRQLKIAIQNEHMLKEMGIENPDHCLG
                     YRLIVKNIERVGDHATELAKDLLEFKKPIKKIALEPIQEMNVFALGVLSDACLSLFKK
                     DFNEAELTVEKSSEITKYERRIFDSIKSLRDDEEIYRVRRINENIRRIAEYASDIAEI
                     VMNMTIEKTLRKQ"
     gene            2478..>2698
                     /locus_tag="VEJ68_01345"
     CDS             2478..>2698
                     /locus_tag="VEJ68_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="queuine tRNA-ribosyltransferase"
                     /protein_id="HXX05445.1"
                     /translation="MDSVLKIKYTLDVLFGIGVSKHLPKNIQFTYSKRTGRIQHVYQN
                     DSLLCTLRTDGGLAITPYFAQILMKSKKFR"
BASE COUNT          736 a          509 c          407 g         1046 t
ORIGIN      
        1 tattacttct ttccagtttt ctataatctc tactctaaaa tcgcttcccc agattttgtt
       61 tacctttgaa atggtatctt taatttcagg atttgcatca tacatcaata tctttgatgc
      121 tccaaatgct ctggatacta aagcaacatg agtagttact ctatcatctc ttaccaaccg
      181 ctgtccaatc cgtaagactt cgattctcat atcttatttt tatttttcaa ttgatatggg
      241 ttgattttgt aatgcatgat aaactagatc ctttaaggca ggaatatttt gaccggtaac
      301 tgcagagacc tgtagccatt ttttgttctc ttttaaccct aattggtcca ctttgtctag
      361 gatttcttcc tcatttacta ggtctgattt gtttaatgca aatatgatct tgtcttgatt
      421 cactccaatt ccatctaggg tagttataca actcctaaat tttttcttta gttctaaaat
      481 aggatcacta atgtcaataa caactatgac agtatcggca taattcaatt cttcaagagt
      541 agatttgaat gcctcgatca tatatgcagg taatttactt atgaaaccaa cagtatctga
      601 tatcaagacc tccacatttt gaagtatgat ttttcttgtt gttgtagaaa gagtggtaaa
      661 gagcttcggg ctttcttcct tttcttctcc agttaaggta ttgaaaagtg ttgtcttacc
      721 tgctgatgta taacccgcaa gtgatacagt tttgaatcca actcttttcc ttgcttctct
      781 gtgaagtgcg cgttgtttgg atgactttag taatttagat ttgacattat tcattcgatt
      841 tttgatatca ttttgataga catcaacttc gaattttcca atacccatga atcctggttg
      901 ttctcccatt tttgctagtc ttactttttc tttggctctt gacatctcat atctaagctg
      961 tgctagctta acctgtagag ttgattctga actccttgct cttctttcaa aaatttctaa
     1021 aatcaacatc tctctatcta aaatttttat tttaagagta gatgctagat tatagttttg
     1081 actaggtttt agaatttcgt cataaattaa gacgtcaggt tttatggagg agactagatc
     1141 tttcagttca tctaccttac cttccccaat tccaaatttg gatttattga ggaacttttg
     1201 ccttatgatt tttcttatgt catatcctgc agattcacaa agagcaattg actctcttac
     1261 tacatcttct ttatcataag ctattaaaat tgctgaatct ctcaatgtta tggttctgtc
     1321 taatagtatc ttattgcttt cgaagtgtct tctctatggt catattcatc acgatttcag
     1381 ctatatcgct agcatattct gctattctac gtatgttttc attaattctt cttacacggt
     1441 atatctcttc atcgtctcta agagacttta tactatcaaa tattcttctc tcatacttgg
     1501 taatctcaga acttttctca acggttaatt cggcctcgtt aaaatctttc ttaaagagtg
     1561 ataaacatgc atcactgagg acaccaagtg caaagacatt catttcttga atgggctcta
     1621 gagctatttt tttgataggt ttcttgaatt ctagaagatc tttagctaat tctgtggcat
     1681 gatcgcctac tcgttctatg ttctttacaa ttaatctgta gccaagacaa tgatctggat
     1741 tttctattcc catctctttt aacatgtgtt cattttgaat ggctatcttt agttgtcgta
     1801 ttatgtaaaa actaaatctg tctacctcat catcactgtt aattacttct tttcctaaat
     1861 caaaatttgc ctctcctaat gcaagtagtg cgtcattttg catcgatttt gcaattatta
     1921 acattcgttt cagtgcccca tctactgaaa gttcaaagag attgatgagc acctgtatgg
     1981 taattccttc tgtcgaatct gcaattattt ctgttcccat cagtatgcct tttactgctt
     2041 ctttgactgc atttctctgc gatggattta atcttccaag ttttggtttc acattaatga
     2101 tgttaaaacc aagcaagtaa agtgagatta acttccttat tatcacagca tcttcatcat
     2161 cttgttttat ctcgatagtt gcatcctcgg tgtttacagg tttgttatgg tgttttagag
     2221 gtactatctg taaagtagaa attccttggc gcataacaga aacctgatcc ccttgtttta
     2281 atcccatgtc ggcaacccat tgtttgggta atgaaacaat atacgaagat tttcccgtga
     2341 attgtatttt cctcatctct tcaatatttc ccatattgca atatgttgtg gattattcta
     2401 tatagttttt cggatccact atatagtatt attatatctg taaaaataat tagggtgtag
     2461 atagataata aattaaaatg gattctgttt tgaagataaa gtatactctg gatgtccttt
     2521 tcggaatcgg tgtatcaaaa catcttccaa aaaatataca atttacatac tcaaaaagaa
     2581 cgggcagaat acagcatgtg tatcaaaacg attctctcct ctgtacatta cgaacagatg
     2641 ggggattggc aattacccct tattttgctc aaattttaat gaaaagtaag aaatttcg
//
LOCUS       DASPUS010000059         2091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_34136, whole genome shotgun sequence.
ACCESSION   DASPUS010000059 DASPUS010000000
VERSION     DASPUS010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2091)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2091
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34136"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            121..1386
                     /locus_tag="VEJ68_01350"
     CDS             121..1386
                     /locus_tag="VEJ68_01350"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HXX05446.1"
                     /translation="MTKFEELGIKNPILTALTEINFNEAFPIQAAAIPILLSGQDVIG
                     QAHTGTGKTAAFSLPIIQNIIPKRGIQALILAPTRELAVQITGEIQKFSRHSNVRYVT
                     IYGGQSINVQFNELERGVEIVVATPGRLIDHIKRGSVRLENVKYVILDEADTMLDMGF
                     IEDIKFILDLVPKDHLTALFSATMPPEILMLAEKYMRNPQRVFIDADDLSGEGIEQAF
                     LVIKDREKTDYLFKFIKENKTGQTIVFCSTKERTRRVARELEKGRFNVVSIQGDMSQF
                     RRDKAMYLFRKGKADILVATDVAARGIDVPEVALVINYDVPNHDLIYFHRIGRTARAG
                     AKGRAITLVSYSSIGDFKAISNQTKVAMKDLNKELGIEVRIPDPLKREVAPRRGYARS
                     GNWGKRHDDRRRYGNGNGNRNYYGLKSRW"
     gene            1429..1761
                     /gene="trxA"
                     /locus_tag="VEJ68_01355"
     CDS             1429..1761
                     /gene="trxA"
                     /locus_tag="VEJ68_01355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HXX05447.1"
                     /translation="MEKAKPVNGKDWDKEVLNSQIPVFVDFWAEWCGPCRMVSPVVEE
                     LASEYAGKINFVKVNVDENNELASKYNVFSIPTLAIFNKGQIITQQIGAASKSSYKNM
                     IDKTLEKI"
     gene            1826..>2091
                     /locus_tag="VEJ68_01360"
     CDS             1826..>2091
                     /locus_tag="VEJ68_01360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HXX05448.1"
                     /translation="MSFGGDVDTLNLLFDKLQNLLNDTQGYYESFLDANTSYKHGKLS
                     EREFFAKLGDYVVAYSALEFLAVKVIFELKKSLDKFAGSHAPGTT"
BASE COUNT          756 a          334 c          443 g          558 t
ORIGIN      
        1 ttttttcaat aatttggaaa gagttattag agacagaagg caaagcaagc taattaaaga
       61 taatgatgga aataaccgaa aaatttctct gtcatttcga taaaaagatg atgaacaaag
      121 ttgacaaaat ttgaagaatt agggataaag aatccaatac taacagcgct aactgagata
      181 aatttcaatg aggcgtttcc tattcaagca gctgcaattc ctattctgtt gtcaggacaa
      241 gatgttatag ggcaagcaca cactgggaca ggcaagacgg cggctttctc cttgcctatt
      301 attcagaata ttattccaaa gcgcggtata caagcattga tacttgcgcc aaccagagaa
      361 ttagctgtac agataacagg agagatccaa aaattttcta ggcattcaaa tgtcagatac
      421 gtaactatct atggaggcca aagcattaat gttcagttca atgaattgga aagaggagtt
      481 gagattgtcg ttgcaactcc aggacgtttg atagaccata taaaaagagg ctcagtaagg
      541 ctggaaaatg tgaagtacgt aattttagac gaagccgata ctatgcttga tatgggattt
      601 attgaagata ttaaattcat tttagattta gttccgaaag atcatctgac agcattattc
      661 tctgcaacca tgcctccaga aattctaatg ttggcagaaa aatatatgcg aaacccacaa
      721 cgtgtattca tcgatgcgga tgacctaagt ggtgaaggaa tcgaacaagc cttcctagtg
      781 ataaaagaca gagaaaaaac ggactatctt tttaaattta tcaaagagaa taagactggt
      841 caaactatag tgttttgttc tactaaagaa agaacaagac gggttgcaag agaactggaa
      901 aagggtagat ttaacgtagt gtctatccag ggtgatatgt cacaattcag acgagataaa
      961 gccatgtatc tatttagaaa ggggaaagca gacatactag ttgcaactga cgtagccgca
     1021 agaggaattg acgttccaga ggtggcatta gtcataaact acgatgttcc aaatcacgat
     1081 ctgatatatt ttcatagaat agggagaaca gccagagcag gagcaaaagg tcgcgccatt
     1141 acattggtct cttattcatc aattggagac tttaaagcaa tatcgaatca aacgaaggtt
     1201 gcaatgaaag atctaaacaa ggaacttggt attgaggtaa ggattcctga tccattaaag
     1261 agagaagttg ctccaaggag aggctatgca agatctggaa actggggaaa acgacacgat
     1321 gacagacgaa gatatggtaa cgggaatggc aatagaaatt actacggact aaaaagtcgc
     1381 tggtaacaaa gcgttcaata tatttaggga taccactctt aataaaatat ggaaaaagca
     1441 aaacctgtaa atggaaaaga ttgggacaaa gaagtattaa attcacagat tcctgtgttc
     1501 gtagattttt gggctgaatg gtgtggtcca tgcaggatgg taagtcctgt cgtcgaagaa
     1561 cttgcaagtg aatatgcagg aaagattaac tttgtgaagg taaatgtgga tgaaaataac
     1621 gaactagcat caaaatataa cgttttcagc attcccacac tagccatctt caataaagga
     1681 cagattataa cacagcaaat aggagctgct tccaagtcat catataagaa tatgatagac
     1741 aaaactcttg aaaaaatcta gtctcaaact aaacctatct ttttttgatc taaaataatt
     1801 aataccggtc agaggaacag tccacatgtc atttggcgga gatgttgata ctcttaactt
     1861 attatttgat aaattgcaaa acctgttaaa tgacacacag ggttactatg aatcctttct
     1921 cgatgcaaat acatcataca aacatggaaa attatccgaa agggagtttt ttgcaaagtt
     1981 gggtgattat gtagttgcat attctgcttt agaatttctt gcggttaagg taatatttga
     2041 gctaaaaaaa tcattagaca agtttgcagg aagtcatgcg cctggtacaa c
//
LOCUS       DASPUS010000060         2014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_852856, whole genome shotgun sequence.
ACCESSION   DASPUS010000060 DASPUS010000000
VERSION     DASPUS010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2014)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_852856"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            146..703
                     /locus_tag="VEJ68_01365"
     CDS             146..703
                     /locus_tag="VEJ68_01365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05449.1"
                     /translation="MEPEPNDVIVLSAISQGSKKFDRIKKKTRIEEEELKSLLERLEN
                     KSFITVVEKKGFFGPKKEIILTESGKKELEERKFELQKNWDSMVTLWKNGNKQELQQY
                     MDNNRSIIPSMMFLGIMDMMMFSSMMGFMGLAMASFIPDQFMYDSGSPDTGHDAGQGG
                     DYSGGGDFGHGDGGPGNMGGFDVNF"
     gene            complement(792..1226)
                     /locus_tag="VEJ68_01370"
     CDS             complement(792..1226)
                     /locus_tag="VEJ68_01370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05450.1"
                     /translation="MSKLPIMVFVASIFVAAFVILTIPNASALIQRDYSYGYNDNHMT
                     ARFGNTLVCGDHMCAPGEWDQLQAKLTSSQLGNQGGRNATNPSYTPSTIPSTPTTTTN
                     ATSTQMPAGVTPKLCAAVKDVLSSTGVSSTVISQVMTDLGCS"
     gene            1326..1988
                     /locus_tag="VEJ68_01375"
     CDS             1326..1988
                     /locus_tag="VEJ68_01375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HXX05451.1"
                     /translation="MAAMIGSKAPNLGISKWVQGLETNVDKEKDNVILVEVFQVNCPG
                     CFMYGIPQAIEIYQKYRKEGVTVLGLATAFEDFDKNTIENLELLLSKGEVIGETLKML
                     GQYDQLVDGKKLPYKIPFPVAMDLLKKENGSINKERINEIIETNVPGFNTYNEDQKSE
                     IIERVKQYLKNKEYSAQTFDQYALKGTPSSILIDKKGILRDVVFGQDNLLEDKIKKLL
                     NE"
BASE COUNT          709 a          325 c          416 g          564 t
ORIGIN      
        1 cctattacag ctatattttt catggcatag aattgtttta tttgttcatc ggtgtgtgtg
       61 tctgtttcca tgtctttaga ttagattatt cctcttaaga gcttgtcgag aaatgattta
      121 tagccataaa taacatcaat acgatgtgga accagaacca aatgatgtaa tagtcctcag
      181 tgcaattagt caaggttcta aaaaatttga caggataaaa aagaagacta ggatcgaaga
      241 agaggaattg aaaagtttac ttgaacgcct tgaaaacaag agttttatca cagtagtaga
      301 aaaaaaagga ttttttggcc caaaaaaaga gataattcta acagaaagtg gcaaaaagga
      361 attagaggag cgaaagtttg aattacaaaa gaattgggac agcatggtaa cactttggaa
      421 gaatggcaat aaacaagaac tccagcaata catggataat aaccgcagca taatcccctc
      481 aatgatgttt cttggaataa tggacatgat gatgttttca tcaatgatgg gcttcatggg
      541 tcttgccatg gcaagtttca ttccagacca attcatgtat gattcaggtt ctccagacac
      601 tggacacgat gcagggcagg gtggagatta cagtggcggc ggagattttg gtcatggaga
      661 tggtggccct ggcaacatgg gcggctttga cgtcaacttc taaaacacca agagaaccaa
      721 aagataaaaa aattgtaaat tcacataatt tcggaaaaat tattgtttaa aaaagaagaa
      781 gacttgtatt tttaactaca accaaggtca gtcattactt ggctaattac agtagatgat
      841 acaccagtac tcgaaagtac atcctttact gcagcacata attttggtgt tactcctgct
      901 ggcatttgtg tcgaagttgc atttgtagtt gtagttggag ttgaaggtat agttgatggt
      961 gtgtatgacg gatttgttgc atttcgtcct ccttgattac ctagttgaga agacgtaagc
     1021 ttggcttgta attgatccca ttcgcctgga gcacacatgt gatctccaca tactagtgtg
     1081 ttaccaaatc ttgctgtcat atggttatca ttgtagccat aactgtagtc tctttgtatt
     1141 aatgcacttg cattagggat tgtcaaaatc acaaaggctg caacaaaaat cgaggcaaca
     1201 aataccatta ttggtaattt ggacataatc cacactatcg aagtggcata taaaagaatt
     1261 tcgacagatc atgtcaattt ttgcaaagaa atagatacca aaatattcga gataaaatga
     1321 ttgtgatggc cgcaatgatt ggttcaaaag ccccgaatct aggcatatca aaatgggttc
     1381 aaggattaga aaccaatgtt gataaggaaa aagacaatgt aatactagtg gaagtttttc
     1441 aggtcaattg ccccggatgt ttcatgtatg gcatacccca agcaattgag atttaccaaa
     1501 aataccgtaa agagggtgtc accgtactcg gacttgcaac agcgttcgag gattttgata
     1561 aaaatacaat tgaaaacttg gaactcttat tatctaaagg agaggtcata ggagagactt
     1621 tgaaaatgtt agggcaatat gatcaactag tagatgggaa aaaacttccg tataaaattc
     1681 catttccagt agctatggat ttactaaaaa aagaaaatgg ttcaattaac aaggaaagaa
     1741 taaacgagat catcgagacc aacgttcctg gttttaacac ctataacgaa gatcagaagt
     1801 cagaaatcat agaaagagtc aagcagtacc taaagaacaa agaatattct gcacaaacct
     1861 tcgatcagta tgcattaaaa ggcacgccat ccagcatttt aattgataaa aaaggaatac
     1921 tgcgtgatgt tgtatttggt caggataatt tacttgaaga taaaatcaag aaattgctta
     1981 acgaatgaga ttcttgaaaa cgactaaagc acag
//
LOCUS       DASPUS010000061         2439 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_852975, whole genome shotgun sequence.
ACCESSION   DASPUS010000061 DASPUS010000000
VERSION     DASPUS010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2439)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2439
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_852975"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            278..409
                     /locus_tag="VEJ68_01380"
     CDS             278..409
                     /locus_tag="VEJ68_01380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05452.1"
                     /translation="MENLLTSDEIDWLCKFLEGKGSNNEIITKIVTITTKLQKMKRK"
     gene            457..1455
                     /gene="ilvC"
                     /locus_tag="VEJ68_01385"
     CDS             457..1455
                     /gene="ilvC"
                     /locus_tag="VEJ68_01385"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HXX05453.1"
                     /translation="MARTWKDADVSLDPIKNQTIAVLGYGIQGSAQANNLKDSGLNVI
                     IGLQESGSSWKKATADGHQVMTIPKACEKADIIHVLIPDMVQSQVYKEQIAGNIKTGK
                     ALSFSHAAAIHWGWIVPPKDVDVIMVAPKGPGSKVRETYQQGFGTPSIVAVYQDFTKK
                     AWDRTLAIAKGIGSTRAGVIETTFKEEVETDWFGEQVDLCGGSASMVMNAFETLVEAG
                     YQPEIAYFEVLHELKLIVDMIQRYGIGGMYRRVSETARYGGLTRGPMVMDKDVKEKMK
                     KALKMIQDGTFNQEWTSDYRKNGKNAFDRYMKEIDAHQVEQVGKKMRKMMWPDSTE"
     gene            complement(1457..1879)
                     /locus_tag="VEJ68_01390"
     CDS             complement(1457..1879)
                     /locus_tag="VEJ68_01390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin B12-binding domain-containing protein"
                     /protein_id="HXX05454.1"
                     /translation="MSQKTQTTRVRILVSKLGLDGHDRGALVLCRAFRDAGMEVIYSG
                     LFATPERIAQIVEDEDVNVVALSLLNGAHLTLFPRVVKALRQKGINDVLVIGGGVIPE
                     DDKTELEKAGVLGNFGPGTPLPTIIDFIQSNLGKIKKK"
BASE COUNT          832 a          398 c          477 g          732 t
ORIGIN      
        1 actattacaa aacaatgggc aaattgatat tcttgttagc ataacataac tgtacacttg
       61 gagaagatta gagcatgccc aatttgtcct caatgcggta caaaaaaatt tgatagaata
      121 aaatctaaag aaatcattgt caagtgcatc aaatgcggta aagaactgat tatttgattt
      181 gaagaatacc gtacttattc ttgtgctgtt tgtatatgtt ttaggaaata tttcatttga
      241 aacaatcaaa taataaatag tatcgtagaa ggaaattatg gaaaatctac ttacgagtga
      301 tgaaatagac tggctttgta aatttctgga aggtaaagga agtaacaatg agatcattac
      361 aaaaatagtg actattacta ccaaattaca gaagatgaaa agaaaataaa aactggatat
      421 ctacattttt attgtgatta tttttaagtg tccagcatgg caaggacctg gaaagatgcc
      481 gatgttagtt tggatccaat aaagaatcaa actatagccg ttttaggtta cggtatacaa
      541 ggaagtgcac aggcaaataa cttgaaagat tcaggtctta atgtaataat aggactacaa
      601 gagtctggtt caagctggaa aaaagcaaca gctgatggac accaagtcat gacgatacca
      661 aaagcatgtg aaaaagctga cattatacat gtgttgattc cagacatggt ccaatcccag
      721 gtctacaaag aacaaattgc aggaaacatc aagacaggaa aggccttgtc gttttcccac
      781 gctgctgcaa ttcattgggg atggatagta cctccaaaag acgttgatgt aataatggtg
      841 gcaccaaaag gtccaggatc taaagtgcgt gaaacttacc agcaaggctt tggaactcca
      901 tccattgtag cagtttatca agattttacc aagaaagctt gggacagaac acttgccatt
      961 gcaaaaggaa ttggtagcac aagggcaggg gtaattgaaa ccacattcaa agaggaggtt
     1021 gagaccgatt ggtttggaga gcaggtggat ctttgtggtg gttcagcatc gatggtaatg
     1081 aatgcatttg aaacactagt tgaggcagga tatcaaccag agattgctta ctttgaggta
     1141 cttcatgaac tcaagctaat tgtagacatg attcagagat atggtatagg agggatgtac
     1201 agacgagtaa gtgaaaccgc aagatatggt ggtttgactc gtggcccaat ggttatggat
     1261 aaggatgtaa aagaaaagat gaaaaaagca ttgaagatga tacaagatgg aacatttaac
     1321 caagaatgga caagcgatta cagaaagaat ggcaaaaacg catttgacag gtatatgaaa
     1381 gagattgatg cgcatcaggt agaacaggtt ggaaagaaga tgcgtaaaat gatgtggccg
     1441 gactctacag aataaactat tttttcttaa tttttcccag attggattgg ataaaatcta
     1501 ttattgttgg aagaggagtt cctggtccaa agtttcctaa tacgcctgcc ttttcaagct
     1561 cagttttgtc gtcttctggg attactcctc caccaatgac taaaacatca ttgattcctt
     1621 tttgtctgag tgcttttaca actctgggaa acagcgtcaa gtgtgcaccg tttagtaaac
     1681 tcaaagctac tacgtttaca tcttcatctt cgacgatctg agctatcctt tctggtgttg
     1741 caaataaccc cgaataaatt acctccatac ctgcatctct aaatgccctg cataagacta
     1801 gggctcctct atcatgaccg tctaaaccta acttggagac caaaatccta acccgcgttg
     1861 tttgggtttt ttgggacata atcttcagag tacctttcgg ttttaaaatc tttagttaaa
     1921 ttatttttgt ttgtaaactc ttatttctaa aaacacttgg actatggaaa attataaaat
     1981 gtttgaaaaa agaatcatca ctcaaaaacg aagaatttgt atgattttcg tctcctgtat
     2041 gctatatcat tattttggta aattatgata ctgaataatt tacaaaatta agaagaattt
     2101 cattttattt ctattcaata atgtgtctta aattgtaaaa caaatgttat gtactaatcc
     2161 attctacgca atgcttatct aatgcagtca gatcgtggtt ttggaggctg tagtttgatg
     2221 ctcagacaac accaacccat ctgttcatca cctacagttg ccattgaatt attatcctaa
     2281 ctaaataata ccagttgaat caacaacggt aatcatattt ttctaagtaa ttcattatag
     2341 attcaaatag aaagttcaac cagtttgttt ggtatggatt actttaacac gaattacttg
     2401 tgtttaatca atctctttgc ttgaaaaatt cttttgaaa
//
LOCUS       DASPUS010000062         3453 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1262853, whole genome shotgun sequence.
ACCESSION   DASPUS010000062 DASPUS010000000
VERSION     DASPUS010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3453)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3453
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1262853"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..889
                     /locus_tag="VEJ68_01395"
     CDS             <1..889
                     /locus_tag="VEJ68_01395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05455.1"
                     /translation="ITASQGNDEIPLYFGVGVEPAPILTMTLNKLNYEVIDKPVLNIS
                     GPPASTLNLVIVDPSDKEKFSDTVMLGSDGLSTYSFNLTAYTPGIYSAVVTRGNDKVV
                     KNFAVGLQIGSGQINIKTIKDTYLPGDNIIILGNSNPNTIIQLTLSDPNGTPIKTEQT
                     FTDKNGIFSAFDFRIPADGSIGTWELDATSGINHKSTNLNVVSSTVMTAQVDRTPPNY
                     SVGDLVLITGSGAGKEADISIKIIGPGNSVVNTLSIQSTNAGVYSTDWSIPKTLGAGT
                     YTIQVATGKLKASTTLTVQ"
     gene            927..1439
                     /locus_tag="VEJ68_01400"
     CDS             927..1439
                     /locus_tag="VEJ68_01400"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HXX05456.1"
                     /translation="MNLKEKIAEIPDFPKKGILFRDISPLLRDPSSLALVVDEFARLI
                     HPKDIDLFAGIESRGFPLACALALRYNKGMIMIRKQGKLPGATHKITYNIEYGTATME
                     LQNNAIKKGERVLICDDLLATGGTAKAAAKLVEKIGGVVAGFAFIIELTDLKGTKEIK
                     NYRYESLVKY"
     gene            1436..2230
                     /locus_tag="VEJ68_01405"
     CDS             1436..2230
                     /locus_tag="VEJ68_01405"
                     /EC_number="2.4.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioadenosine phosphorylase"
                     /protein_id="HXX05457.1"
                     /translation="MTEQAEIGIFGGTGIYDPGLLSESKEITIETPFGKTSDSITVGV
                     YKGRKVAFMPRHGKKHTIAPHLINFRANIWAFKEMGIKRIIAPSAVGSLKENLKPGDF
                     VIPSQFIDFTKSRKYTLYEQDKVIHISVADPFCPELQNAVYDSAKKINLHLHRDATYV
                     CIEGPRFSTRAESRFYKDVINADIIGMTLVPECQLAREAQMCYVSISTVTDYDVWSTK
                     PVTAKEVLETLSKNVHTTKNILGMLFDYIPEKRGCSCAKALEEAQF"
     gene            complement(2227..2511)
                     /locus_tag="VEJ68_01410"
     CDS             complement(2227..2511)
                     /locus_tag="VEJ68_01410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010191617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05458.1"
                     /translation="MNLQVHIKDVRGSQIAAKITGTFVLDTYTFKFSAIAFGRIGGHN
                     IGAKIPKSVQKELVKLGYDVDEVINELQQKLVHGDISLPEGIKKESFADS"
     gene            complement(2519..2917)
                     /locus_tag="VEJ68_01415"
     CDS             complement(2519..2917)
                     /locus_tag="VEJ68_01415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008301529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05459.1"
                     /translation="MSADKDSCKHEIVYFGVTNLNYEKRTIGSVDTWRCVKCKKLFCE
                     EKQLGIDSIADYVGMPTIASDQQWSVLLCNLKKHKEKWKLVKIKKDDEIQHECLDEKI
                     IKLKVQDFKIQDDKHWNFLIENSINKAVEI"
     gene            complement(2940..3299)
                     /locus_tag="VEJ68_01420"
     CDS             complement(2940..3299)
                     /locus_tag="VEJ68_01420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HXX05460.1"
                     /translation="MSVNIDTIEEKLVLELRLSPLQAKVFLLVINKGKMSAKNIAQHI
                     GISESEALDVAKSLVEFGGFIDITKTEFESTHPRFAVVNMYRRMCLRENIPFKKNLLV
                     DNMSIILEKPYDDARTK"
BASE COUNT         1142 a          622 c          608 g         1081 t
ORIGIN      
        1 cattactgca tcacaaggaa atgatgaaat tcctctctac tttggagtgg gagtagaacc
       61 agctccaata ctaacgatga ctctgaacaa attaaattat gaggtaatcg ataaacccgt
      121 tcttaatatt tcaggaccac ctgcatccac attaaatctt gtaatagtag atccttcaga
      181 taaagaaaag ttttctgata cagtaatgtt gggctctgat ggactttcaa cttattcatt
      241 taatctaacg gcctatactc caggaatcta ttccgctgtt gttactagag gaaatgacaa
      301 agtcgttaag aattttgcag tagggttaca gatcggttca ggacaaatca atatcaagac
      361 cattaaagac acatatcttc ctggagataa tataatcatc ttaggtaact cgaatccaaa
      421 tactatcatt caactcacgt tgtcggaccc aaatggcaca ccgatcaaga ctgaacaaac
      481 atttacagat aaaaatggaa tattttctgc ctttgacttt agaataccgg cagatggttc
      541 aattggtact tgggaacttg atgctaccag tggcattaac cataaaagta caaatctcaa
      601 cgttgtatct tcaacagtca tgacagctca agtagataga actcctccaa attattcagt
      661 gggcgatctt gtgttaatca ctggcagtgg tgcaggaaag gaggctgata tatcaattaa
      721 aataattgga ccgggaaatt ctgttgtaaa tacacttagc atacaatcga caaatgcagg
      781 agtctattct acagattgga gcattccaaa aaccttgggt gctggtacct ataccattca
      841 agtagctacg ggaaaattga aggcatctac aaccctaaca gtacagtaac aaatattttt
      901 tatatccacc atttattgaa cgaattgtga atcttaaaga aaaaatagcc gagataccag
      961 actttccaaa aaaaggtatt ctatttagag acattagccc gttgttaaga gatccttcgt
     1021 cacttgcgct tgttgtagat gaatttgcca ggcttatcca tcccaaagat attgatctct
     1081 ttgctggaat agaatcaaga ggatttccat tggcgtgtgc attggctctt agatacaata
     1141 aagggatgat aatgataaga aaacaaggca agttaccagg tgctacacac aagataacat
     1201 acaacataga atatggaaca gctacaatgg aacttcaaaa taatgcaata aaaaaaggcg
     1261 agcgagttct catatgtgac gacttgcttg ccactggagg aacagcaaag gctgcagcca
     1321 agttagttga aaagattgga ggagttgttg caggttttgc tttcattatc gagttaacgg
     1381 atctcaaagg tactaaggaa attaagaatt acagatacga atcactggtg aaatattgac
     1441 tgaacaagca gagattggaa tctttggtgg tactgggatt tatgacccag gtttgctaag
     1501 cgagagtaaa gaaattacaa tagaaactcc gtttggcaaa acatcagatt ctataacagt
     1561 gggagtgtac aaaggtagaa aagttgcgtt tatgccaaga catggaaaaa aacacaccat
     1621 tgcacctcat ttgataaact tcagggccaa catttgggca ttcaaagaga tgggcattaa
     1681 acgaatcatt gcaccgtctg cggtaggcag tctcaaagaa aatctcaagc ctggagattt
     1741 tgtaattcct tcacagttta ttgattttac caaatcaaga aagtatacac tgtatgaaca
     1801 ggataaagta attcacatat cagtagctga ccctttctgt cctgagctac aaaatgcagt
     1861 atatgattca gcaaaaaaga tcaatttgca cctgcatcga gatgcaactt atgtttgcat
     1921 cgaaggtccg cgattttcaa ccagagcaga atcaagattt tacaaagatg ttattaatgc
     1981 tgacattata ggtatgacat tagttcctga atgtcaactt gcaagagagg ctcagatgtg
     2041 ttatgtatct atttcaaccg taacagatta tgatgtctgg tctacaaaac ctgtaactgc
     2101 aaaagaagtt ctagagacat tatcaaaaaa tgttcatact actaaaaata tcctaggtat
     2161 gctctttgat tacattcctg aaaaacgagg ttgttcctgt gcaaaagcac tggaagaagc
     2221 tcaattttag ctatctgcaa aagattcttt cttaattcct tcaggaagag atatgtctcc
     2281 gtgtacaagt ttttgttgta actcgtttat tacctcatca acatcataac ccaattttac
     2341 taattccttt tgaactgatt ttgggatctt agcaccaatg ttatgtcccc ctattcttcc
     2401 aaaagcaatt gcgctaaact tgaaggtata agtatcaagc acaaatgttc cagttatttt
     2461 ggcagcaatt tgacttccac gcacatcttt aatatgaacc tgaagattca tgaggatctt
     2521 aaatttcgac agctttgttg atagaatttt ctattaagaa attccagtgt ttgtcatcct
     2581 ggatcttaaa atcttgtacc tttaatttta ttatcttctc atccaaacat tcgtgttgaa
     2641 tttcatcatc ttttttaatt ttaaccagtt tccacttttc tttgtgtttt tttaggttac
     2701 atagtaaaac agaccattgc tgatctgaag cgattgtagg cattcccaca taatctgcaa
     2761 tgctatcaat tcctagttgt ttttcttcgc aaaataattt cttacatttt acacaacgcc
     2821 aagtgtccac ggaaccgatg gttctttttt cgtaatttag attggtaact ccaaagtaaa
     2881 caatttcatg tttgcaagaa tctttatcag cagacattgt tttttctcca tatcgggcat
     2941 tatttagttc ttgcatcgtc atatggtttt tccaaaataa ttgacatgtt atctactaaa
     3001 agattcttct taaatggaat attttctctt aaacacattc ttcgatacat gtttactact
     3061 gcaaaacgtg gatgcgttga ttcaaattct gtttttgtta tatcgataaa acctccaaac
     3121 tctacaagac tttttgctac atcaagagct tcagattcag atataccaat atgttgagca
     3181 atattttttg cagacatttt acctttgttt attaccagca agaaaacttt agcttgtaga
     3241 ggagatagtc taagttctaa gacaagtttt tcctcaattg tatcaatatt tacgctcatg
     3301 aagattgaaa caaattttgt tataattaaa gatgcataat actcgctgaa attaaatata
     3361 ctctaagaat aaccatatca tgaagttagt tataggaata actggtagtt caggaatttt
     3421 atacggaatt agaatgttag aggtactaaa acg
//
LOCUS       DASPUS010000063         2910 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_989403, whole genome shotgun sequence.
ACCESSION   DASPUS010000063 DASPUS010000000
VERSION     DASPUS010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2910)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2910
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_989403"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1183
                     /locus_tag="VEJ68_01425"
     CDS             <1..1183
                     /locus_tag="VEJ68_01425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HXX05461.1"
                     /translation="TKSIDKKLGNAIVKACDKILSGKFLDQFLVEPINSGAGTAFNMN
                     TNEVIANVAIEMLGKKKGDYKVVNPNDHVNMSQSSNDTFPTAMHVAILFNVKQVIPVL
                     DELITTLTKKAKEFTSYQKIGRTHLMDALPITLGGEFSAYTTAIAKARDAIFVAKKEL
                     EQVALGGSAVGTGANTPKGYRTIAISELAKISKLALKPQPDMQYALQSRFAVEYLSST
                     LRNLALELGRVSNDIRLMASGPVAGLSELGIPAVHAGSSIMPGKVNPSLAECMNMVCF
                     NIIGNDTTTALAAQSGQFELNVMLPVMLKAVLESTDMLKNFVPIFSRNLIAGLSANKK
                     KLHQYIENSPVIVTLLSPKLGYLVSADLYKESLKTGKTIRELVVSKGLMSEKEVNSLL
                     G"
     gene            1185..2453
                     /locus_tag="VEJ68_01430"
     CDS             1185..2453
                     /locus_tag="VEJ68_01430"
                     /EC_number="2.8.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase"
                     /protein_id="HXX05462.1"
                     /translation="MAKIWVEAYGCSASFADSEMISGLIVNGGHTLAQDASDSDLNLI
                     VTCSVKDATADKMVNRIKRLKSKPLVVAGCLPKAEKLTVEKFSPRASLLGPNSIGKTL
                     DVIESTLKGNKKIELVDSDVSKVGLPKVRLNHAVGIVEIATGCMSECTFCQTKLSKGE
                     IQSFRIGDIVRQIKQELEDGCKEVWLTSTDNGCYGFDIGTDLPSLVKAVSEIDRDFMI
                     RVGMMNPMYMSRIRDSLLESFEDNKVFKFFHIPVQSGSNKVLKDMKRGHTAEVYRKTS
                     ELFRGKFEKFTISTDIIVGFPTETEEDFEQTLKLIKETRPDIINLSRYSARPGTKASL
                     LEQIDVSEIKRRSKMVFELSNEIVLERNQEWIGWKGPVLFDERTDDSIKGRNYGYKPI
                     IVEEKVKLGERHTVEITDATKHGLYGKIVS"
     gene            2529..>2910
                     /locus_tag="VEJ68_01435"
     CDS             2529..>2910
                     /locus_tag="VEJ68_01435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HXX05463.1"
                     /translation="MEFELQDPILVVGLGGAGCRLATTVKERLGYDSLLISHDSKDLG
                     QESSKILINTSPILNPSSYLIRGRSFSARGPISEKLQSYSTVIIIANLAGKSGAALAP
                     VVSQIGKELGKNVLSFGIMPYKFEK"
BASE COUNT         1001 a          532 c          618 g          759 t
ORIGIN      
        1 aaccaaatca attgataaaa aacttggaaa cgcaattgtc aaagcctgtg acaagatact
       61 atcaggtaag tttcttgacc aatttcttgt agagccaatt aattcgggag caggtactgc
      121 atttaacatg aacacaaacg aggtcatcgc aaatgttgca atagaaatgc ttggcaaaaa
      181 gaaaggcgat tacaaagttg taaacccaaa tgatcatgta aacatgtctc aatcaagtaa
      241 tgatacattt cctactgcga tgcatgtagc gattttgttt aatgtgaagc aagtcatccc
      301 agtattagat gagttaataa cgacactgac aaaaaaagca aaagagttta caagctacca
      361 aaagattgga agaacccatt tgatggatgc actgccaatt actttgggtg gagaattttc
      421 cgcatatacc acagcaattg caaaagctcg agatgcgata tttgttgcaa aaaaagaatt
      481 ggagcaagta gcattgggtg gaagtgctgt tggcacaggt gcaaacacac caaagggata
      541 cagaactatt gcaatctctg aattggcaaa gatttcaaaa cttgcactca agccacagcc
      601 agatatgcag tatgctcttc aaagtagatt tgcagtagag tacctgtcat ctactcttag
      661 aaatcttgcc ctagaacttg gaagagtatc aaatgacatc agactgatgg catcaggtcc
      721 tgttgcgggc ctatctgagc ttggaattcc tgcagtccat gcaggttctt caattatgcc
      781 aggcaaagtc aacccgtcac ttgcagaatg catgaacatg gtttgcttta acataatagg
      841 caatgacacc accactgcac ttgcagctca atcaggtcag tttgagctta acgtaatgct
      901 tcctgtcatg ttaaaagctg ttttagaatc aacagatatg ctcaaaaatt tcgtccccat
      961 cttctcacgc aatttaattg ccggacttag tgccaacaag aaaaaactcc accagtatat
     1021 agaaaatagt ccagtcatag ttacactgct ctcaccaaaa cttggatact tggtttcagc
     1081 agacctctac aaagaatctc tcaagactgg caaaactata cgtgaacttg tagtttcaaa
     1141 aggattaatg agcgaaaaag aagtcaactc cttactgggt tagcatggca aagatctggg
     1201 tagaagcata cggctgttct gcaagctttg cagactcgga gatgatcagc ggccttattg
     1261 taaatggagg acatactctt gcgcaggatg catcagactc tgatctcaat ctaattgtaa
     1321 catgttctgt aaaagatgca actgctgata agatggtaaa taggataaag agactaaaga
     1381 gcaaacctct ggtggtagca ggttgtctcc caaaagccga aaaattaaca gttgaaaaat
     1441 tcagcccaag agcaagccta cttggaccaa attcgattgg gaagactttg gatgtaattg
     1501 aatcaacctt gaaaggcaat aaaaaaattg aacttgttga ctcggatgtt tcaaaggtag
     1561 gactgcccaa ggtcaggtta aaccatgctg taggaatagt cgagatagca actggctgta
     1621 tgagtgaatg cactttctgt cagacaaagt tatctaaagg agagattcag agcttcagaa
     1681 ttggagacat tgtacgccag ataaaacaag aactcgaaga tggctgcaag gaggtctggc
     1741 ttacgtcaac tgataatggt tgttatggat ttgacatagg aaccgattta ccaagcctag
     1801 tcaaggcggt ctctgaaata gatagagact ttatgattcg agttggaatg atgaacccca
     1861 tgtacatgtc aagaatacga gatagtcttc ttgaatcatt tgaggataac aaagtcttca
     1921 agtttttcca cattccagta cagagcggaa gcaacaaagt tctaaaagat atgaaacgcg
     1981 gccataccgc tgaggtttat agaaagacaa gtgaactttt cagagggaaa tttgaaaaat
     2041 ttaccatttc tactgacatt attgtaggat ttccaacaga gactgaggag gactttgagc
     2101 aaaccctgaa gctgataaaa gaaacccgac cagacatcat aaatctctca agatatagtg
     2161 caagacctgg aaccaaggcg tctctgctag aacaaatcga tgtgtctgag ataaagagga
     2221 gaagcaagat ggtctttgaa ttatcaaatg agatagtctt ggagagaaat caagaatgga
     2281 ttggatggaa gggaccagta ttatttgatg agaggacaga cgattccatc aagggaagaa
     2341 attatggcta caaaccaatt atcgttgaag agaaagtgaa attgggagaa agacataccg
     2401 tagaaatcac cgatgctaca aaacatggac tttatggcaa aatcgtgagc taaatttttt
     2461 agatcgaagc ttggatcaaa actaatcaac aaagtttttt aatcaatttt gtaagcaaaa
     2521 tgagagtcat ggaattcgaa ttacaagatc caatcttagt ggttggactg ggcggtgccg
     2581 gatgtagact agctacaacc gtaaaagaaa gactcggtta tgactctctc ttgataagcc
     2641 atgattcaaa agaccttggc caagaatcat ctaaaatttt gataaatacc agtccaattt
     2701 taaatccatc atcatatctt atcagaggca gatcatttag tgccagaggt cctatttcag
     2761 aaaaattgca atcatattct actgttatca taattgccaa tttggctgga aaatctggtg
     2821 ccgcattggc tccagtagta tctcagattg gaaaagaact tggaaagaat gtgctttctt
     2881 ttggcataat gccttacaaa tttgaaaagg
//
LOCUS       DASPUS010000064         2347 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_715098, whole genome shotgun sequence.
ACCESSION   DASPUS010000064 DASPUS010000000
VERSION     DASPUS010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2347)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_715098"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..257)
                     /locus_tag="VEJ68_01440"
     CDS             complement(<1..257)
                     /locus_tag="VEJ68_01440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-coenzyme A synthetase N-terminal
                     domain-containing protein"
                     /protein_id="HXX05464.1"
                     /translation="MEATYQIGLGNHDIQTRKSANNDYVRFWEEQAKNLHWFDKWNKT
                     LEWNPPFAKWFVGGTINASYNALDVIVQKYPQKKAFFWEGE"
     gene            complement(236..1156)
                     /locus_tag="VEJ68_01445"
     CDS             complement(236..1156)
                     /locus_tag="VEJ68_01445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CdvA-like protein"
                     /protein_id="HXX05465.1"
                     /translation="MSKEDVEFIGKQVKDMYGTFIGKVIGTITDIDGSVQTVGVDCGS
                     EGLKQIPFEQLVVQGQFVIFIPRWRLDAQRLLREKGLTLRRMRALIDIVSENDDMKED
                     AELIHEKYKMKLLTLDETEKQIKEKLDQRLADLDNQLKSIRMLRFDAKLQHKSNEISD
                     AKYESVKTHTVEIIEHIEHEKAEIVNIQRRINDLSVEHVERTESPKQDVHSAAISYLG
                     KVENSPTSNPAVPITPSVGASQNTPQTTSPKPVAIVADGEEETQDSDWLKRIFFLRKS
                     SGIESLPPPLSANLFFRIHTESVYWKQLIR"
     gene            1298..1579
                     /locus_tag="VEJ68_01450"
     CDS             1298..1579
                     /locus_tag="VEJ68_01450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05466.1"
                     /translation="MITKEELDEVLHFVAKRWVDMSREPNHKAFANMPTNFWMNSMGG
                     GAGEGKWVTTLMYTEDAEKAEAFKEVLLRWQSVHNAKERSPDLIQIGKK"
     gene            1979..>2347
                     /locus_tag="VEJ68_01455"
     CDS             1979..>2347
                     /locus_tag="VEJ68_01455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05467.1"
                     /translation="MGLVVAIILLATISSSAFAAADGGYKITTGKGSPSNSYGNDGDF
                     YLDSSNGNYWQKDHGKWTNQINLDGPKGDKGDKGDKGDKGTPGPQGPPGPPGPQGIQG
                     PQGPAGPAGPAGPAGPASPAG"
BASE COUNT          689 a          441 c          467 g          750 t
ORIGIN      
        1 ttctcacctt cccaaaaaaa ggcttttttt tgagggtact tttgaacaat cacgtcaagt
       61 gcattatatg aagcgtttat tgttccgcct acaaaccact ttgcgaaggg cggattccat
      121 tctaatgttt tattccactt gtcaaaccag tgaaggtttt ttgcttgttc ttcccagaat
      181 ctcacataat cattgtttgc actctttctt gtttgaatat cgtgatttcc cagacctatc
      241 tgataagttg cttccaatag acagattctg tatgtatcct aaaaaaaaga tttgctgaaa
      301 gaggaggagg aagcgattct atcccactag actttctcaa gaagaagatt ctcttaagcc
      361 aatctgagtc ttgagtttct tcttcgccat cggctacaat agcaactggt tttggagatg
      421 ttgtctgggg agtattttga ctagctccta cactaggagt tattggtacc gctgggttag
      481 aagtgggaga attttccacc ttaccaaggt aggaaatggc ggctgaatgc acatcctgtt
      541 ttggactctc tgttcgctcc acatgttcaa ctgaaagatc gttgatgcga cgttggatgt
      601 ttactatctc tgccttttcg tgttcgatgt gttcgataat ctctactgta tgagttttga
      661 ctgattcgta cttggcatca gatatttcat tgcttttatg ttgcaacttg gcatcaaatc
      721 tcagcattct gattgacttt aactgattgt caaggtcggc cagtcgttga tctagttttt
      781 ctttgatctg tttttctgtc tcatccagag ttagcaattt catcttatac ttctcatgga
      841 tcaattcagc atcctccttc atgtcatcgt tttcagatac gatatctatc agcgcacgca
      901 ttcggcgcaa tgtaagaccc ttctctcgca acaatcgctg ggcatccaat ctccatctag
      961 gaatgaagat tacgaattgt ccctggacga ccaattgctc gaatggaatt tgtttgagtc
     1021 cttcggaacc acaatcaaca cctacggttt gtacacttcc gtcaatgtcg gtgatagtac
     1081 ctatgacttt accaataaaa gtgccgtaca tgtccttaac ctgcttgccg ataaattcga
     1141 catcttcttt gctcattgcc aagaagtttt atttttgata taatcaacaa agtgttaaca
     1201 aggtttctgg ttttagtaag atcattttag ctaagttata gagttttaga agagatttta
     1261 gtaattttaa aatcatcaac ttggtaatgg tctaactatg attacaaagg aagagttaga
     1321 cgaagtcctc cattttgttg ccaaaagatg ggtggacatg agcagggagc caaaccataa
     1381 agcttttgca aatatgccga ccaatttttg gatgaattcc atgggcggcg gcgcaggaga
     1441 aggaaagtgg gtaacaacat tgatgtacac tgaagatgca gaaaaagctg aagcattcaa
     1501 agaagttcta ttacgatggc aatcagtaca caatgcaaag gaaagatcac ctgacttgat
     1561 tcagattgga aaaaagtaga ttgtagagat ttagtctggt aatattttac cgtaggctaa
     1621 ttctttatca catattcata gattttaaat cagcgatata atgaatgatg attgtttcaa
     1681 atttggaagt tcaaatttaa aaaatgaatt aatagaaaag taagacctcg tgttattcat
     1741 aaacatcaga ttatcttttt tagtttgatc attcaatttt ttgattctaa tttaacaaaa
     1801 attgaatttt attttcatac tttaatccaa attatcattt ttcaattttg gaaattgttg
     1861 aaaatatgat caattcaaga atattttgta cgttgttgga gaagtcgtaa ttaccatttt
     1921 tggtagatga tatttttata attccaaaaa tctcgaataa gtgatgaaac atcaaacgat
     1981 ggggttggtt gtagcaatta ttttattggc aacaattagc tcatccgcat ttgcagcagc
     2041 agatggcggt tacaaaatca ctacaggcaa aggctcacca tcaaactcgt atggcaatga
     2101 tggagatttt tacctagata gttcgaatgg caactactgg caaaaagatc atggcaaatg
     2161 gacaaatcag attaatcttg atggtccaaa gggtgacaag ggagacaaag gtgacaaggg
     2221 agacaaaggt acacctggtc cacaaggtcc acctggtcct ccaggcccac aaggaattca
     2281 aggtccacaa ggtccagcag gcccagcggg tccagcaggc ccagcaggtc ctgccagtcc
     2341 agctggt
//
LOCUS       DASPUS010000065         2216 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_308645, whole genome shotgun sequence.
ACCESSION   DASPUS010000065 DASPUS010000000
VERSION     DASPUS010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2216)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308645"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            266..880
                     /locus_tag="VEJ68_01460"
     CDS             266..880
                     /locus_tag="VEJ68_01460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HXX05468.1"
                     /translation="MSGLDSLLAKSLTVTIRENLGDRTMQKIEQRIFERHGINLTKAV
                     ENFTILDGVLREFFGGGAEGLEKQFMKGLIALEQESCQEKEWITIEDSNLSTIILKSL
                     GDDDKNKILNAVIGKSMIISDILFVTQIPQTSGYRKVNSLIEDGLLIAEGYDVLADGK
                     RVTKYKTLFENVQINIVQNKITIKIKVSEMSLKNSSVIQVACSR"
     gene            885..1196
                     /locus_tag="VEJ68_01465"
     CDS             885..1196
                     /locus_tag="VEJ68_01465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05469.1"
                     /translation="MTIADMQLVRKALVTLTIEQALIEIGGKALLNDVLRILYEKCQC
                     YLPDCFDHPENFRKVWNELDEGTCNLMINLVKRNLKEFAYQKSIEEFLAGINQLKCFT
                     R"
     gene            complement(1229..1894)
                     /locus_tag="VEJ68_01470"
     CDS             complement(1229..1894)
                     /locus_tag="VEJ68_01470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein ScpA"
                     /protein_id="HXX05470.1"
                     /translation="MSQGNNDIGIAQPPVNILFGPLDVSKKDVWSIDITRILDILIKI
                     LNQTDKKDLRVAGIAALSSAMIHRMKVESIFALQKAAMEKKPLSQREEMDIEMINMPY
                     RHESTYPVTLDELLSVLENLIGTIANPRSSRRQMEFEPIQAPNFDEYFISLEKIIGQY
                     EELVVNKIRATGYGSFKTIVSGLELIDVIRCFFAILFLARDMKVDLEQTEDDIIISVA
                     QKS"
     gene            2019..>2216
                     /locus_tag="VEJ68_01475"
     CDS             2019..>2216
                     /locus_tag="VEJ68_01475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05471.1"
                     /translation="MDKDLEKFELASTYLKNNQNIAAHHLFVSLAQKETKGQSFKAGL
                     YLILASQCKTNQGKDGKEELLE"
BASE COUNT          738 a          368 c          401 g          709 t
ORIGIN      
        1 gaggccttcc agcagaataa agagcagcct ctaatctagc atttgcttcg tcatcttcta
       61 cctttcccat acgtattaaa agaaagaatt gagcgtactt aaatgaaatt cctattgact
      121 attgatacac ttgtaaattt ctattttctt gtaaaattag gcatattttg aatcaatttc
      181 tgcaatctag atcccagaac aagagatgta atattatcat gttacacatt agtggatttt
      241 aagcccatag ttgtatatct ctcaaatgtc tggattagac agtctactgg caaagtcact
      301 tactgttact attagagaaa atctaggcga taggacaatg caaaaaatcg agcagagaat
      361 ttttgaacga catggtatta atcttacaaa ggctgttgaa aactttacaa tattagatgg
      421 tgtactaaga gaattctttg gtggtggtgc agaaggactt gaaaaacaat tcatgaaagg
      481 tttgattgca ttagaacaag aatcatgtca agaaaaggaa tggataacaa tagaagattc
      541 caatctttcc actattatat taaaatctct tggcgacgat gataagaata agattctaaa
      601 tgcagtcatt ggtaaatcga tgatcatctc tgatatccta tttgtaactc agattccaca
      661 aacctctggt tatagaaaag taaattcact cattgaggat ggacttttga tagctgaagg
      721 atatgatgtg ctggcagatg gaaaaagagt aactaaatac aagacattat ttgagaatgt
      781 tcagataaac attgtacaaa ataaaataac aataaagatc aaagtttcag aaatgtcatt
      841 aaagaacagt tctgtaatac aggttgcttg ttctaggtga taaaatgaca attgccgata
      901 tgcaattggt acgaaaggca cttgttactc ttacaattga gcaagctttg atagaaattg
      961 gtggaaaggc gctgttaaac gatgttcttc gaatattata tgagaaatgt caatgttatt
     1021 taccagattg ttttgatcat ccggagaatt ttagaaaggt atggaatgaa cttgatgaag
     1081 gcacatgcaa tctcatgata aatctggtta aaagaaacct caaggaattt gcctatcaaa
     1141 aatctatcga ggaatttctt gctggcataa accaactaaa atgcttcacg cgataatcga
     1201 tttcaacaaa tcaatattcg attatatttt agctcttttg tgccactgaa attattatgt
     1261 cgtcctctgt ttgttctagg tcaaccttca tgtctcttgc tagaaagaga attgcaaaga
     1321 aacatcttat gacatcgatt aattcaaggc cagaaactat tgtcttaaag gaaccatatc
     1381 cagtagctcg tattttgttt acgaccagct cttcatattg accaattatt ttctcaagcg
     1441 agatgaaata ttcatcaaaa tttggagctt ggatgggctc aaattccatc tgtctacgac
     1501 ttgaacgcgg atttgctatt gtgccaatga gattttcaag aacggacaat aattcgtcca
     1561 gtgtaactgg atatgtagat tcatgcctat atggcatgtt tatcatttca atatccattt
     1621 cttctctctg gctgagtggc tttttttcca tggctgcttt ttgtagagca aatatgcttt
     1681 ctaccttcat tctatgtatc attgcagatg acaaagcagc aattccagcc acgcgcagat
     1741 cctttttatc agtttgattg agaattttta ttaaaatatc taggatgcgt gtaatgtcta
     1801 tgctccaaac atcttttttg gatacatcaa gaggtccaaa aagtatgtta acaggaggtt
     1861 gtgctatgcc aatgtcatta tttccctggc tcactggtta caaattttct ttgtctctat
     1921 aatatctgtt agatttgttc ttttgacaat tcaagtcaag aatattgtta tgtaaaggaa
     1981 agtcaaacaa tataagatta atctgtatag tctcaacatt ggataaagat ctagagaaat
     2041 ttgagctggc ttctacatac ctaaaaaaca accaaaacat tgccgcacat catctattcg
     2101 tgtctcttgc ccaaaaggaa acaaaaggtc aaagtttcaa ggctgggtta tacctgattc
     2161 ttgcttcaca gtgcaagaca aatcaaggca aggatggaaa agaagaactg cttgag
//
LOCUS       DASPUS010000066         2857 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_583491, whole genome shotgun sequence.
ACCESSION   DASPUS010000066 DASPUS010000000
VERSION     DASPUS010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2857)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2857)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2857
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_583491"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..705
                     /locus_tag="VEJ68_01480"
     CDS             <1..705
                     /locus_tag="VEJ68_01480"
                     /inference="COORDINATES: protein motif:HMM:NF014010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate uptake regulator PhoU"
                     /protein_id="HXX05472.1"
                     /translation="VRRNMIGTEIVESTPESITIQILTSLPELSISDALKRMFLLTIT
                     MHRQAIDALKEMDAELGEEITHMDDEVDRFSLYILRNLTLAVEHEKILRDIGLQKPSD
                     CINYRIVVKSIERVADHAVSIASRVKFLKSTLEQALIQKITKLSEESLKVFEDSIAAL
                     NKRDYILADAVAQNACRIADKEKEFTDSLEESKKYSSVIKFVLEDIRRTAEYSSDIAE
                     AVINETVQDVISENGS"
     gene            783..1598
                     /locus_tag="VEJ68_01485"
     CDS             783..1598
                     /locus_tag="VEJ68_01485"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HXX05473.1"
                     /translation="MSELIRLQKKLFIKKFKKILERFTKRLDQHIMEPSEENIHDIRI
                     AIRRLESACRIMPKNLRKKRVIQDYMEETKKLFKINTQIRDIDIICEKFERQHTSKYL
                     ELSNHLKNRRENELKTAHQLALKVKGIPLPKIKGKDIIDSELNKRFHKIVNELTAQIQ
                     QNIPIVISDEKKIDELHILRKDFKKLRYSIELTSNKTISSTSIKSLKKIQDLLGEIHD
                     CDIMLDYLREVKGPNELSDVIRNEILERREKYQQFVQSMDAEKFNPENLILQF"
     gene            complement(1587..>2857)
                     /locus_tag="VEJ68_01490"
     CDS             complement(1587..>2857)
                     /locus_tag="VEJ68_01490"
                     /inference="COORDINATES: protein motif:HMM:NF014587.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05474.1"
                     /translation="AVREAENKDEFLDEVYKETGFRFKVLTEREEALYSYVGALKSLQ
                     IPDALFFDIGGGSIEIVHAERFKIKNVISLPLGALRLTQQFDSEDGTFTQKSYRNMKR
                     YVWDMLPDKKELGLGKDIKLVGVGGVLRALARYDHMITKYPLDEIHNYRITSKSVSNI
                     SKHISKMRSNEISKIPVIGSGRAETMVAGSCVINTIMEKFGFNNLWISNHGLREGALA
                     IFLENQKAYHAKNITAEQIRETIGIEKPSHSFQNSENFINALISSKLISKREYQILSF
                     AEKKILEKLSYNNPQSLFYSIMDEDMSLSHADQLVLGLSLVHTRHVKTSEWLFSRYRT
                     ILSPQDKTTIRKISSLITLLGVLDRTKSKIELKRLTEGIAELNIIQSKLLPKLLLRNA
                     LSKFGTAFDIHVICMLRSDEQSVQSSVLEL"
BASE COUNT         1023 a          480 c          459 g          895 t
ORIGIN      
        1 gtacgaagaa atatgatagg aacagagata gtagaatcaa cacctgaatc catcaccata
       61 caaatactga cgagtttgcc cgaactatcc ataagtgatg cactcaagag aatgttcctt
      121 cttacaatta ccatgcacag acaagccatt gatgctctaa aagaaatgga tgccgaactt
      181 ggcgaagaaa ttacacatat ggacgatgaa gtagatcgat ttagtttgta cattttacga
      241 aatcttactt tggcagtaga acatgaaaaa atattacgtg atattggttt gcaaaagcct
      301 tctgattgta ttaattatag aatagttgta aaatcaatcg aaagagttgc tgatcacgca
      361 gtatcaatcg caagcagagt caaattccta aaatccacct tggaacaggc tcttattcaa
      421 aagattacta aacttagcga agaatcgcta aaagtttttg aggactctat tgctgctcta
      481 aacaagagag actatatcct tgcagatgca gttgcccaaa atgcatgcag aatagccgat
      541 aaagaaaaag aatttactga tagcttggaa gaatctaaaa aatacagcag tgtcatcaag
      601 tttgttttgg aagatattcg cagaaccgct gaatactcaa gtgacattgc agaagcagta
      661 atcaatgaga cagtccaaga cgtaatttct gaaaacggta gttaaagaaa atttagagtg
      721 taaatatatc aaaatgaatc agtgtaaaca gctaaataag agaatcctca tctacagtta
      781 acatgtctga gttaattcga ctccagaaga aattatttat aaaaaaattt aaaaagattc
      841 ttgaaagatt tacaaaaaga ttagatcaac acattatgga acctagtgaa gaaaacattc
      901 acgatattag aattgcaata aggcgtctgg aatctgcttg tagaattatg ccaaaaaatt
      961 tgagaaaaaa acgagtcatc caagattata tggaagaaac taaaaagcta ttcaagatta
     1021 acactcagat tcgagatatc gatataattt gtgaaaagtt tgaaagacaa cacacctcaa
     1081 aatacttgga actttcaaat catcttaaaa atagacgaga aaatgagcta aagaccgcac
     1141 atcaactagc tttgaaagta aagggtattc ctttgccaaa gataaaaggc aaagacatta
     1201 ttgattcaga attaaacaaa agatttcata agattgttaa tgaacttact gctcagattc
     1261 aacaaaacat acctattgtt attagtgatg agaaaaaaat tgatgaactc catatattaa
     1321 gaaaagattt caagaaactt cgatattcga ttgagttaac ttcgaataag accatctctt
     1381 ccacatccat aaaaagcctt aagaaaatcc aagatctatt aggcgaaatt catgattgtg
     1441 atataatgtt agattatcta agagaagtaa aaggtcctaa tgaattatca gatgtcataa
     1501 gaaatgaaat cctagaaaga cgtgaaaagt accaacaatt tgttcaatca atggatgctg
     1561 aaaaatttaa tccagaaaat ttgatcttac aattctaata cagaactttg aacactctgt
     1621 tcatcagaac gtaacatgca aattacatgt atgtcaaacg cagttccaaa tttactaaga
     1681 gcatttctta agagcaattt tggcaataat tttgattgga tgatattaag ttccgctatt
     1741 ccttcggtaa gtcgctttaa ctcaatcttt gatttggttc tgtcaaggac tcctaatagt
     1801 gtaataagag atgaaatttt tctaattgtt gtcttatctt gtggtgataa aattgttcga
     1861 tatcttgaaa ataaccactc tgatgttttt acatgtctag tatgtaccaa agataatccc
     1921 aagacaagct gatctgcatg actcagtgac atatcttcat ccataatgga atagaacaaa
     1981 ctttgtggat tattgtacga taatttttct aaaattttct tttcagcaaa tgaaagtatt
     2041 tggtattcac gtttactaat taattttgaa gagattaatg cattaatgaa attctcagaa
     2101 ttctgaaatg agtgagaagg tttttcaatt ccaatagttt ctcgaatttg ctctgctgtg
     2161 atgttttttg catgatatgc tttttgattt tcaaggaaaa ttgcaagtgc tccttctcta
     2221 agtccatgat tacttatcca aagattgtta aaaccaaact tttccataat tgtatttata
     2281 acacaggatc ctgctaccat tgtttctgct ctgccagaac cgattactgg tatctttgaa
     2341 atttcatttg atcgcatttt agatatatgc ttggatatat tactcacaga ttttgaagta
     2401 attctataat tgtgaatctc atctaaggga tactttgtaa tcatatgatc atatcttgca
     2461 agtgcacgta atactccacc tactccaaca agtttgatat ccttaccaag accaagttct
     2521 tttttatcag gtaacatatc ccaaacatat cgtttcatat ttctgtaact cttttgtgta
     2581 aatgtaccat cctcagaatc aaattgctgg gttaatctca atgctccaag tggcaatgat
     2641 atgacgtttt ttatcttgaa tctctctgca tgtacaatct ctatacttcc acctcctatg
     2701 tcgaaaaata aggcatctgg aatttgtaga gactttagtg caccaacata cgagtaaagt
     2761 gcctcttctc tttcagttaa gaccttgaat cgaaatcctg tctctttgta aacctcatca
     2821 agaaattcat ccttattttc tgcttctctt acggcac
//
LOCUS       DASPUS010000067         2402 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_170347, whole genome shotgun sequence.
ACCESSION   DASPUS010000067 DASPUS010000000
VERSION     DASPUS010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2402)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2402
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170347"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="VEJ68_01495"
     CDS             <1..426
                     /locus_tag="VEJ68_01495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HXX05475.1"
                     /translation="RRILKELLNNSNRSYRHLATDLDVAPGTVLKRIKDMEANGIISG
                     YSIVLDHKKLGSKITAIIELTTSGGKLEEMERKISRLPNIYGVYNTTGSPDAVIIGTF
                     KDTDDLGKFTKNLLGMPFVSRTNTLVVLKKVKEDFRLQP"
     gene            complement(454..1626)
                     /locus_tag="VEJ68_01500"
     CDS             complement(454..1626)
                     /locus_tag="VEJ68_01500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008299208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HXX05476.1"
                     /translation="MVKGQDLAVSLEEFGLSKYEAQAYVTLITKGTISASELSYYSNL
                     PRTKVYPTLLKLEKKKIAIISKSKPIMCTAIAPEDAFDELIHEQINHVNAMNSLITKL
                     KQLSEDSKKARGAEEKRYFHLAPNYVFKQLQSMIDGSKTSVHALVDSWGLNLLSQCKE
                     GLIHTLRKNVDVKIIIPSTLVGTETFHSLPSEVKLKTADIAQNVIVFDDSEILMINGN
                     NGKGAIFLSTDVLGTNQVKAFEQAWKSGIKINNLAEMTKSDAQEALKTIQLINDNGLG
                     FVLNSMLNSKSKGIDMLVFLKKNGLDLESKTLDDIISLVDSTLGITCSGQLRYESQGN
                     NFVIESKANSGHSIPWALLLEGYLNRKGIKTKMIYSDRQQTGEKIHIKVDSKLVIN"
     gene            1736..2344
                     /locus_tag="VEJ68_01505"
     CDS             1736..2344
                     /locus_tag="VEJ68_01505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05477.1"
                     /translation="MAKQGFDKSKSWFLIEMVTRSKWVIDDDSKNQIVRASTIKPRID
                     YAAEIVDKTLDILGQKKLELDKANLELYKQSERDQDSVKILAKQVTLELEISYAIESL
                     RQVRRSLDSIMGLGNLPTVLSPTISIVRTIRSRLFLLMPLLDFQLGDLSLLLSGVIID
                     AAHLASSNLDFGRANETSKRLLDEAKLIADSKIYKQFPNLDF"
BASE COUNT          722 a          439 c          452 g          789 t
ORIGIN      
        1 agacgtatct taaaggaact actgaacaat tcgaatcgtt cttaccgtca tcttgcaaca
       61 gatctagatg ttgccccagg tacagttctg aagcgaataa aggatatgga ggctaatggg
      121 ataatctccg gatattcgat cgtccttgac cataagaaac ttggttctaa aattactgca
      181 ataattgagc ttaccacttc tggtggaaag ctagaagaga tggaaaggaa gatctcccgc
      241 cttccaaata tttatggtgt ttataatacc acaggttcac ctgacgcagt tattattggc
      301 accttcaaag acaccgacga tctaggtaag tttacaaaaa atctattggg aatgcctttt
      361 gttagcagga caaatactct tgtggtacta aaaaaagtaa aagaagattt taggttacaa
      421 ccgtgatgtg tctaaaactt cgtaaaaatg actctaattt atgactagtt tggaatcaac
      481 tttgatgtgt atcttttcac cagtctgctg gcgatcactg taaatcatct tggttttaat
      541 tccttttctg tttagatatc cttcaagtaa taatgcccaa ggaatagagt gaccactatt
      601 tgcctttgat tctattacaa aattatttcc ctgagattca tatctgagtt ggccagaaca
      661 tgtaatgcct agagtcgagt ctacaagaga gattatgtca tcaagtgttt tagactctaa
      721 atcaagtcca tttttcttca ggaaaacaag catgtctatg cccttacttt ttgagtttaa
      781 catagaattt agcacaaatc caagaccatt gtcatttatc agctgaattg tcttgagtgc
      841 ttcctgtgca tctgactttg tcatttctgc taaattgttt atcttgattc cacttttcca
      901 agcttgctca aaggccttta cttggtttgt acctaaaaca tccgttgaaa gaaatatcgc
      961 gcccttgccg ttattaccat ttatcataag aatttctgaa tcatcgaaga caatcacatt
     1021 ctgggcaatg tctgcggttt taagtttgac ctctgatgga agactatgaa atgtttctgt
     1081 gcccacaaga gttgatggaa taattatctt gacatcaaca ttttttcgta acgtgtgaat
     1141 taggccttcc ttacactgtg acaagagatt gagtccccat gaatctacta atgcatgtac
     1201 ggatgtcttt gatccatcga tcatagattg aagttgcttg aatacatagt ttggagcaag
     1261 atggaaatat ctcttctctt ctgcacccct tgcttttttg ctgtcttcgc tgagctgttt
     1321 tagttttgta atcaaactat tcattgcatt aacatggttt atttgttcat gaattaattc
     1381 atcaaaagca tcctctggtg caattgctgt gcacattatt ggtttacttt ttgatattat
     1441 ggcaatcttc tttttttcta gttttaataa ggtggggtat accttggttc ttggcaaatt
     1501 ggaataatat gataactcac ttgcagatat ggttcccttt gtgattagag tgacataggc
     1561 ctgcgcttcg tatttactca agccaaattc ttccaagctt actgctaaat cttgtccttt
     1621 gaccatggca gtgattatct atcttgaagg taagcccaat agctaaattc attgaacaaa
     1681 ggctaaaaaa aatactaagc tgtatctgta acccatgtta ctgtggtgac agaacttggc
     1741 aaaacaagga tttgataaat caaaatcttg gtttttgatt gaaatggtaa ctcgatcaaa
     1801 atgggtaata gatgatgata gtaaaaatca gattgtcaga gcaagcacaa taaagcctag
     1861 aattgactat gcagctgaga ttgttgataa gacactagat attcttggtc aaaaaaaatt
     1921 ggaacttgac aaggcaaact tggaattgta caaacaaagt gagagagacc aagactctgt
     1981 gaaaattctg gcaaagcagg taactttgga gcttgaaata tcatatgcca tagaatcact
     2041 cagacaagta cgacgtagtc ttgattccat tatgggactg ggaaatttac ctaccgttct
     2101 atctcctacc atatctattg taagaacaat aaggtctaga ttgttcctat tgatgccttt
     2161 gcttgatttt cagttaggtg atttatcgct tcttttaagc ggggttatca tagacgcagc
     2221 acatcttgca agctccaatc ttgattttgg aagggcaaat gagacctcga aaaggctcct
     2281 ggatgaagct aagttgattg ccgactctaa aatttacaag cagttcccta atctagattt
     2341 ctagtaaggc cttgacatgt tgaactttct aaaaaatgat accgaggagg aacctcttct
     2401 ta
//
LOCUS       DASPUS010000068         3503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1401233, whole genome shotgun sequence.
ACCESSION   DASPUS010000068 DASPUS010000000
VERSION     DASPUS010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3503)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3503
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1401233"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..809)
                     /locus_tag="VEJ68_01510"
     CDS             complement(<1..809)
                     /locus_tag="VEJ68_01510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HXX05478.1"
                     /translation="MHSDKIKNFLHKKREADQGGGEDRILAQHDKGKLTARERIDLLL
                     DEGSFTEVDAMVTHHYYEFDMQSKKFFGDAVVTGFGTINNRKVFVFAYDFTVLGGTLS
                     EMGAKKITKVMDHATRTGCPIIGIIDSGGARIQEGILSLDGFASIFYHNQLASGVVPQ
                     ITCSIGPSAGGAVYSPAMTDFVIMVDKLATMFVTGPEVVKTVLGEEVSFDELGGAMAH
                     GKLSGVAQFVAKNEYQCMDVVKTLLSYVPQNSTEEPPHVETGDDPNRLDHNL"
     gene            complement(846..1118)
                     /locus_tag="VEJ68_01515"
     CDS             complement(846..1118)
                     /locus_tag="VEJ68_01515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05479.1"
                     /translation="MTEGTTKITPLDPVYHGESNYEVGLEGLLAETREKYRKLQSDPN
                     ASKEMIRETTENLQILEGLWENYHIGMNVFRNAKGGRDGIREVKPE"
     gene            complement(1183..1500)
                     /locus_tag="VEJ68_01520"
     CDS             complement(1183..1500)
                     /locus_tag="VEJ68_01520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05480.1"
                     /translation="MSWRAIPMKFPGTCLVCKQKIEVNEVALWAKGLGVKHQKCAQVN
                     ELKCAICGTSAGCLQCEFADDCNREKVSQLCICKKCYGEKDAFVLYQKTILKRFPILN
                     IKT"
     gene            complement(1497..2654)
                     /locus_tag="VEJ68_01525"
     CDS             complement(1497..2654)
                     /locus_tag="VEJ68_01525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HXX05481.1"
                     /translation="MWSEKYRPKNLLEMIGNEEAKESFVNWIGKWVKGTKPLLLVGPP
                     GTGKTTMAILGSKLFNYDLISLNASDVRTKQKIQDVLNPVMGNTTVLGKPMIFVDEVD
                     GIHGRSDYGGVEALVDILKEPTVPIVLAANSETSDKMKSIKKVTTTVRMRPIPPRLMR
                     FYLEEILRREGASLQIGALIKLILNSRGDIRSMLNSVQALVWGFQPQTDRSFETTDIE
                     SAVNAFFKAKSIDEATGILYSLRIDPQEKINAFYSSVITSPISKTEMQEMLDVISEAD
                     MLYGKIVRKQEWRLLRYLDSILLRLYKEGTAVRYSQYNLSWPLLNRLRWDGRAIKELA
                     SVFAKKMHVSRSTFSTYYLPCILLCMKNKTLMMELSESQNEIIQKEMTLTK"
     gene            complement(2664..>3503)
                     /locus_tag="VEJ68_01530"
     CDS             complement(2664..>3503)
                     /locus_tag="VEJ68_01530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008301045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05482.1"
                     /translation="AVKKRLENYETLQDRVSRILNSNFVKMTFPVFSALYDSASEHFG
                     DTNDMQKKTDIVDGHIIAIDLSEPMDRIMDRDEDVDYLDDYKLMNPYILQLARKKIKS
                     GGEEVLEEFERGFKDARVGQYVDFKLKTKPKSITEESMIECYKKYRAVMGTAGKNMAL
                     TRLPLGEIFYLGMAKAAESVGCGNEIEDSIKNKFVKIPSWPLYYGLLTNDIRKGFEFT
                     LKKSELYLSEARLALELLPQNFSHKDFLEFLFITVEHYNSYWFNQLDKQKLWSEFTSK
                     FPK"
BASE COUNT          976 a          727 c          560 g         1240 t
ORIGIN      
        1 agattgtgat caagtctatt tggatcatcg cctgtttcta catgtggtgg ttcttcagtg
       61 ctgttttgtg gcacatatga taagagtgtc tttactacat ccatgcattg atattcattt
      121 tttgcaacaa attgagctac accacttaat tttccatgag ccatagcgcc accaagttca
      181 tcaaatgaaa cttcttctcc aagaactgtt ttaactactt ctggtcctgt tacaaacatg
      241 gtagcaagtt tgtctaccat tattacaaaa tctgtcatgg ctggagaata aactgcacca
      301 cctgctgatg gaccaatact acaagtgatt tgaggaacta caccagatgc aagttgatta
      361 tgataaaaga tactcgcaaa accatcaagg cttaaaattc cctcctgaat tctggcgcca
      421 cccgagtcta ttataccaat tattggacat cctgttctag ttgcatgatc cattactttt
      481 gtaattttct tagcacccat ctcacttagt gttccaccaa gaacggtaaa atcataagca
      541 aaaacgaaaa cttttctatt atttattgta ccaaagcctg ttactacagc atcaccaaaa
      601 aatttcttgc tttgcatatc aaattcgtag tagtgatgag taaccatggc gtccacttct
      661 gtaaaacttc cttcatccag tagaaggtca atcctttctc gagcagtcag cttcccttta
      721 tcatgctgag ctagaattct atcttcgcca ccgccttgat cagcctctcg ttttttgtgc
      781 aaaaaatttt taatcttatc agaatgcatg agtcgaaata gaagcgactt acaacctata
      841 ttaatttact caggtttgac ttctcgaatt ccatcgcgac caccctttgc gtttctaaag
      901 acattcatgc cgatgtgata attttcccac aagccttcta gtatctgtag gttttctgtt
      961 gtttcacgga tcatttcctt acttgcatta ggatcagatt gtagtttgcg atatttttct
     1021 ctagtttcag ctagaagacc ctcaaggcct acctcgtagt ttgattctcc gtggtatact
     1081 ggatctagtg gggttatctt tgtggtccct tctgtcatca tttcttctct aggtagggca
     1141 aattttaagt ttttacttga gtacaataag gctttaacaa gattaggttt tgatatttag
     1201 tattggaaat cgctttaaga tagttttttg ataaagtacg aaagcatctt tttcgccata
     1261 acatttctta caaatgcata actgtgaaac tttttcgcga ttacaatcat cagcaaattc
     1321 gcattgtaga caacctgcag atgtaccaca aattgcacat tttaattcat ttacttgagc
     1381 acatttttga tgttttactc ccaaaccttt agcccagaga gctacttcgt ttacttctat
     1441 tttctgttta cagactagac aggttccagg aaatttcatt ggaatagcac gccagctcat
     1501 tttgttaaag tcatctcttt ttgtatgatc tcgttttgag attcgctgag ttccatcatt
     1561 agtgttttgt ttttcataca caacaaaata caaggcaaat aataagttga aaaagtacta
     1621 cgtgaaacat gcattttttt tgcaaaaacc gaagccaact cctttattgc tctaccatcc
     1681 caacgcaatc tattcaatag tggccaagat aaattatatt gagaatacct caccgcagtt
     1741 ccttctttgt ataatcgtag cagtattgaa tcaagatatc gtaatagtct ccattcttgt
     1801 tttcttacta tctttccata caacatatct gcttcagata taacatccaa catctcttgc
     1861 atttctgttt tggaaattgg acttgttata acgctggaat aaaatgcatt gattttttct
     1921 tgtggatcaa ttcttaacga atacaaaatt ccagtagctt catcgattga ctttgctttg
     1981 aaaaaagcat tgacagcaga ttcaatgtct gtcgtttcaa aagatctatc tgtctgcggt
     2041 tgaaatcccc agacaagtgc ttgtactgaa tttaacattg atctgatatc ccccctagaa
     2101 ttaagaatta attttattaa agcgccaatt tgaagggaag ctccctctcg acgtagaatc
     2161 tcctccagat agaatctcat tagtcttggt ggtatcggac gcatccttac tgttgtagtg
     2221 acttttttta tggacttcat cttgtcagaa gtctcagaat ttgctgccaa aactattggt
     2281 acagttggtt cttttagaat atcgacaagt gcctcgactc ctccatagtc agatcttcca
     2341 tgtattccgt ccacctcatc tacaaaaatc atgggttttc ccagcacagt agtatttccc
     2401 attacaggat ttaggacatc ttgtatcttt tgtttagttc gcacatcact tgcgttaaga
     2461 cttatgaggt cgtaattgaa taattttgaa ccaagaattg ccattgtagt ctttccagtt
     2521 ccaggcggtc caacaagtaa tagtggcttt gttcctttaa cccactttcc aatccaattt
     2581 acaaatgact cttttgcttc ctcgtttcca atcatctcaa ggaggttttt gggtctatat
     2641 ttttcggacc acatcatact ttatcacttt ggaaactttg atgtaaattc tgaccaaagt
     2701 ttctgtttgt caagttggtt aaaccagtaa gaattgtaat gctctactgt gatgaataga
     2761 aattctaaaa agtctttatg agaaaaattt tgcggtaata gttctaaggc tagtcttgcc
     2821 tcactcaagt acaattcgct tttcttcaga gtaaactcaa atccttttcg aatatcattt
     2881 gtaagtagac cataataaag cggccaagaa ggtatcttga caaatttgtt cttaatggag
     2941 tcttcaatct cattgccaca tcccacggat tctgctgctt ttgccatacc aagataaaat
     3001 atttcgccga gaggcaatct tgttagagcc atattttttc cagcagttcc cataactgct
     3061 ctgtattttt tgtagcattc aatcatagat tcttctgtga tgctctttgg ttttgttttt
     3121 agtttaaagt ctacatattg acccactcgg gcatctttga agccacgttc aaattcttct
     3181 aatacctcct cgcctccact tttaattttt tttcttgcaa gttgcaaaat gtatggattc
     3241 attagcttgt aatcatcaag atagtctaca tcttcatctc tatccattat cctgtccatt
     3301 ggttcgctga ggtctattgc tattatatga ccatcaacaa tgtcggtctt cttttgcatg
     3361 tcatttgtat caccaaaatg ttccgatgca gaatcatata gagcactaaa aactggaaat
     3421 gtcattttga caaagttgga attaagaatt ctagatactc tatcttgtaa agtttcataa
     3481 ttttcaagcc ttttttttac agc
//
LOCUS       DASPUS010000069         2409 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_36359, whole genome shotgun sequence.
ACCESSION   DASPUS010000069 DASPUS010000000
VERSION     DASPUS010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36359"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1046
                     /gene="wecB"
                     /locus_tag="VEJ68_01535"
     CDS             <1..1046
                     /gene="wecB"
                     /locus_tag="VEJ68_01535"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: protein motif:HMM:TIGR00236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HXX05483.1"
                     /translation="GTRPEIIKLYPIVNQLKDSFLILTGQHYDYNLSLQFIEDLGIRK
                     PDFSLNLKNRNPAIQTGELIMKLSQIFSKVKMDTVIVQGDTNTALAASMASLKTGIPV
                     SHVESGLRSFDWRMPEEHNRIAIDHISELLFAPTHATKKNLTIENVHGKIFVTGNTVI
                     DSINKFATLSTKKTNLSINHKTFVLMTLHRSENVDNKGILAGIVKAVLNSKENFVFPV
                     HPRTFKRLHEFNLYKKLEESKNVQMLKAVGYFDIMELMKKCLFILTDSGGIQEEATSP
                     KIRKKVLVVRRTTDRPEAVLAGLSDLVGTNSRRILSAIRRASKNPSIGKKKTPYGKGD
                     AGRKIVDIIQRTF"
     gene            complement(1069..>2409)
                     /locus_tag="VEJ68_01540"
     CDS             complement(1069..>2409)
                     /locus_tag="VEJ68_01540"
                     /inference="COORDINATES: protein motif:HMM:NF026018.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis C-terminal
                     domain-containing protein"
                     /protein_id="HXX05484.1"
                     /translation="TIFSVIATIGVPTGVQRFLGKLFAEQKIQDANVFIKSSLVLVTI
                     GLFACLILIIITKDFFHNIFNYHHSLMLVFFVLIISLSMYNLFRSIIISSLKTRMLPI
                     ITLVSTSLKIVLGIILVLTGMGVLGMTIGFILFPILASILFFITLKSILRSTENRSDI
                     KIKNSIKETLSSSLANWIPTLVTTIGSQLGTIIVFGSQGASHAGIYFIAFSIFTAIAA
                     ITSVLLSISYPALSAMKDGRKTFAWRVTKMSLIATLPISTSIIFYSRDIMHLFGQEYV
                     DGAISLQLLLVSSLPAVVTSGINSLIYSRGNYKQVLVMGLASSIPRVLLYFILVPVYG
                     STGAAISYTAGSFFGFVISVLFARTVGLKIFWKELFLILIVPTGLGFVLSYAGINYVV
                     GIVITCIVSCILYVKMQIITRNDIHDSISGLPSKIANPTLRILNNIAKKLNEHF"
BASE COUNT          856 a          403 c          436 g          714 t
ORIGIN      
        1 tgggaacaag accagaaatt atcaagttat atcccattgt aaatcaactc aaggattctt
       61 tcttaatttt aactggtcaa cattatgatt acaacttgag ccttcaattt atagaagacc
      121 ttggtattcg caagcctgat ttttctttga atttgaaaaa tagaaatcct gcaatacaaa
      181 ctggtgagtt aatcatgaag ctctcacaaa ttttttcaaa agtgaagatg gacaccgtta
      241 tagttcaggg agatacaaat actgcccttg ctgcatctat ggcatctctt aaaacaggca
      301 tacctgtaag tcatgttgaa tctggtctac gaagttttga ttggcgtatg ccagaagagc
      361 ataacagaat tgcaatagat cacatttcag agcttctttt tgcacccacc cacgcaacta
      421 aaaaaaattt aacaattgag aatgttcatg gaaaaatttt tgtgactgga aacactgtaa
      481 tagattcgat aaacaaattt gcgactttgt ctactaaaaa aaccaatctt tcaattaatc
      541 ataaaacctt tgttttgatg acattgcata gatctgaaaa cgtggacaac aaaggaattc
      601 ttgctggcat tgtaaaagca gttttgaatt ccaaggaaaa ttttgttttt ccggtacacc
      661 ctcgcacgtt taaacgtctt catgaattta atttgtataa aaaactagag gaatcgaaaa
      721 atgtgcaaat gctaaaggcc gtaggttatt ttgatattat ggagttaatg aaaaaatgtc
      781 tcttcatact tactgactcg ggtggaattc aagaagaggc aacatctcct aagataagaa
      841 agaaagtact tgtggttcgt agaacaactg acagaccaga ggcggtgctt gctggtttgt
      901 cagatttagt gggaacaaat tctcgaagaa tactttcagc catcagaaga gcttcgaaaa
      961 atcccagtat cggcaagaaa aaaacacctt atggaaaagg tgatgctggt agaaagattg
     1021 tcgatatcat tcaaagaacc ttctaaaatt tatttgtcct aatttttttt aaaaatgttc
     1081 gtttagtttc tttgcaatat tgtttaagat acgaagggtg ggatttgcaa tttttgaagg
     1141 aaggccgctt atcgagtcat gtatgtcatt tctagttatt atctgcattt ttacatacaa
     1201 tatgcatgat actatgcatg taataacaat ccctactaca taattaatcc ctgcatagct
     1261 tagaacaaat cctaatcctg tcggtactat taaaattaag aaaagttcct tccagaatat
     1321 ctttaatcca accgttcttg caaataaaac agaaataacg aatccaaaaa atgaacccgc
     1381 agtgtagctt attgctgcac cggtacttcc atagacaggg actagtataa aataaagtaa
     1441 tactcgggga atacttgatg caaggcccat tactaagact tgtttgtaat taccacgcga
     1501 ataaattaag gaattaatcc cgctagttac cacagctggc aaagaagata cgagtaatag
     1561 ttgcaaggaa atagccccgt ccacatattc ctgtccaaat aaatgcatga tgtctcttga
     1621 ataaaaaata atagatgttg aaatgggaag agttgcgatc aaactcattt ttgttaccct
     1681 ccaagcaaat gttttccgac cgtccttcat ggcacttagt gcaggatagg agatggataa
     1741 caagacagat gtaatggcag ctattgcagt gaaaatggaa aatgcaataa agtaaattcc
     1801 ggcatggctt gctccttggg agccaaaaac aatgatggtt cctaattggg aaccaatagt
     1861 tgttactaat gtgggaatcc agtttgcaag actagaggat agggtttctt taatagagtt
     1921 tttaatttta atatcggatc tattctcagt tgatctaaga atagacttta atgtaataaa
     1981 gaaaagaatc gatgcaagaa tagggaataa tatgaagcct atagtcattc ccaaaactcc
     2041 cattccggta agtactaaaa taattccaag aacaatcttt aatgaagtgg agactagtgt
     2101 tataattggc aacattcttg ttttcaaaga tgaaataatt attgaacgga acaaattgta
     2161 catggacaaa gaaattatca atacaaaaaa tacaagcatc aaactatgat gataattgaa
     2221 tatattgtga aagaaatcct tggtaattat aatcagtata aggcaggcaa ataaaccaat
     2281 agttactaaa accaatgacg attttatgaa tacattagcg tcctgaattt tctgttctgc
     2341 aaataacttg cccaaaaacc gttgaactcc tgtggggaca ccaatggtag caataactga
     2401 gaaaattgt
//
LOCUS       DASPUS010000070         3191 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_856270, whole genome shotgun sequence.
ACCESSION   DASPUS010000070 DASPUS010000000
VERSION     DASPUS010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3191)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3191
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_856270"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..509
                     /locus_tag="VEJ68_01545"
     CDS             <1..509
                     /locus_tag="VEJ68_01545"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HXX05485.1"
                     /translation="YGLGCDPRNPQAVKSIYRIKGRNESKNLPILGFSVDEISKIVIF
                     DEMSKKIAAKFWPGPVTLILKIKDNEIAKSLNLTNKVAVRVPNHPCTLALLEECRIII
                     GTSANRSGHPPSGDPIEIANNLEGYDLLLDGGKIVEPVESTIVEVNDNQLKILRSGKI
                     SEKELLAL"
     gene            536..1027
                     /locus_tag="VEJ68_01550"
     CDS             536..1027
                     /locus_tag="VEJ68_01550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="THUMP domain-containing protein"
                     /protein_id="HXX05486.1"
                     /translation="MEEEAVNEISEFLQDVGDADPKVEISEFSGIVTACTSLNPFDVI
                     IEIRKKILDEPWSVRYCHRFIPIQETIMTDLDDIVKAVQKHINKMKSTDSYRITIEKR
                     GSDLSSKDMIDSIAKIIHNKVSLEKFDWNIIIEVLGKISGISILKESDIVSTLKIKRD
                     SME"
     gene            complement(1016..1792)
                     /gene="cgi121"
                     /locus_tag="VEJ68_01555"
     CDS             complement(1016..1792)
                     /gene="cgi121"
                     /locus_tag="VEJ68_01555"
                     /inference="COORDINATES: protein motif:HMM:NF011465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KEOPS complex subunit Cgi121"
                     /protein_id="HXX05487.1"
                     /translation="MITIKFLGGAKKSFLTDELKIEKNIKTIADLLEYLQKLIPTSTL
                     LDIKNILVAVNGVDSSALGGICTDLKDGDVISIIPVVHGGSPRRIIFKIGGNFAELIG
                     LGKINYDPINFLETLRKKYPDLFIQGVQSKHIVSVRYAKKIISISLAARSANVLLSNK
                     IETDILMRFAFTRQINDAINKIGLQEGHDSILIVIGTKSSINRLYKEIKHLIKSLELQ
                     SSNSNFMKKEYLITNKQLKCIMSKNPLEDLLSEKSAVLFH"
     gene            complement(1855..2112)
                     /locus_tag="VEJ68_01560"
     CDS             complement(1855..2112)
                     /locus_tag="VEJ68_01560"
                     /inference="COORDINATES: protein motif:HMM:NF013029.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05488.1"
                     /translation="MNRVRRISTELLTAYKEKFGTDFIQNKKVLNEIAIVRSKGLKNE
                     IAGFITAHLRRELEEQNEESQAVAQTQSEDSSVEMEEQILS"
     gene            complement(2144..2905)
                     /locus_tag="VEJ68_01565"
     CDS             complement(2144..2905)
                     /locus_tag="VEJ68_01565"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HXX05489.1"
                     /translation="MTTNWLTDVHIHLSDSEFKPDLQSIITAMNKMKIKACCVSVDYS
                     SSKATLDLCKESPLILPFIGIHPEKANDDLQPMVDLIEENSKQISGIGEIGLDKTYVS
                     NESDFNKQIQIFQKMLSLAEKLQKPVSVHSRKTLDEIFSILPSYHINGILLHWFAGSK
                     KQLTKAMDLGCFVSYGPAMVYSQDKQVLLSQTEHDKILFETDGPVKFSRCFGFKTAQV
                     TFLPSVLFCASNILHKTYDEMLSISEKNTNSYLGV"
     gene            3002..>3191
                     /locus_tag="VEJ68_01570"
     CDS             3002..>3191
                     /locus_tag="VEJ68_01570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histone"
                     /protein_id="HXX05490.1"
                     /translation="MTTSEFGLSVMYRILKKAGAERVSDESASELRRILEEIGTSIAK
                     SAVEMSVHAGRKTIKAEDV"
BASE COUNT         1046 a          502 c          567 g         1076 t
ORIGIN      
        1 tctatggttt aggatgcgat ccacgaaatc ctcaagcagt aaaatcaatt tatagaatta
       61 agggaagaaa tgaatcaaaa aatcttccta ttttgggctt ttctgtagat gagatttcca
      121 agatagtgat ttttgatgag atgtcaaaga agattgcagc caaattttgg cctgggcctg
      181 taactctaat actcaaaatt aaagacaacg aaattgcaaa atcactcaat ctaacaaaca
      241 aagtagcagt acgtgttccc aatcatcctt gtacgctagc attactggag gaatgtagaa
      301 ttattattgg cacaagtgct aataggtctg gacatccacc atctggagac ccaatagaga
      361 ttgcaaacaa tttagaagga tacgatttac ttttagacgg tgggaaaatt gttgagcctg
      421 ttgaatctac tattgttgag gtcaatgata accaattgaa aatattacga tctggaaaaa
      481 ttagtgaaaa agaattgctt gcgttatgaa tctaatagtt acttgcagta gacatatgga
      541 agaagaagca gtaaatgaaa tttcagaatt tcttcaagac gttggagatg ctgatccaaa
      601 ggtagagatc tctgaatttt caggcatagt taccgcatgt acttcactga atccttttga
      661 tgttattatt gaaatacgaa agaaaattct tgatgaaccg tggagtgtga gatactgtca
      721 caggtttata ccaattcagg aaactatcat gactgatttg gatgatatag taaaagcagt
      781 tcaaaagcac atcaataaaa tgaagtctac tgattcatac agaataacta tagaaaaaag
      841 gggttcagat ttatcttcta aagacatgat tgacagtatt gctaaaataa ttcataacaa
      901 agtgtctctt gagaaatttg attggaatat aattattgaa gtcttgggca aaatatcagg
      961 tatttcgatt ctaaaagaat ctgatatcgt aagtacgttg aagataaagc gagattcaat
     1021 ggaataaaac tgcagatttt tctgacagca aatcttcaag aggatttttt gacattatac
     1081 atttgagttg tttgttagtt atcagatatt cttttttcat aaagtttgaa ttacttgatt
     1141 gtaactcaag tgactttata agatgtttaa tttctttgta aagtctgtta attgatgatt
     1201 ttgtaccaat tacgataaga atagaatcgt gtccctcttg aagtcctatt ttgtttatgg
     1261 catcattgat ttgtcttgta aacgcaaatc tcatcaaaat atctgtctct attttattag
     1321 aaagtaacac atttgcactt cttgcagcaa gggaaattga gatgattttt tttgcatatc
     1381 ttacgcttac aatatgctta gactggacac cttgaatgaa tagatctgga tatttttttc
     1441 gtaatgtttc aagaaaatta atgggatcat aattgatctt gcctagtcct attaattctg
     1501 cgaaattacc gccaatttta aatatgattc ttcgtggact gccgccatga actactggaa
     1561 ttatacttat gacatcgcca tctttaagat ctgtacaaat tcctccaagt gctgatgaat
     1621 caacaccatt aactgcaacc aagatatttt tgatatctaa taatgtactt gttggaatta
     1681 atttctgaag atattctaat aaatctgcta tagtttttat atttttttca attttgagtt
     1741 catcggttag aaaggacttt ttagccccgc ccagaaattt tatagttatc atacaatgtg
     1801 aaattaccta gttcaatatg gaatttttga ttagagaatc ctaataatga ataattaact
     1861 cagaatttgt tcttccattt ctacagaact atcttcagat tgggtttgag ctactgcttg
     1921 tgactcttca ttctgctctt caagttctct tctcaaatga gctgttatga aacctgcaat
     1981 ttcatttttt aatccctttg atcttactat ggcaatttca ttaagcactt tcttgttctg
     2041 tataaaatca gttccgaatt tctctttata agcagtcaac agttctgttg agattcgtct
     2101 gactctattc acgacatcga atggcaatag gggtatttta tacctataca ccaagatatg
     2161 aatttgtatt tttttcactg atggaaagca tctcatcgta tgttttatga agaatatttg
     2221 atgcacagaa aagaacgctt ggaagaaagg tcacctgtgc tgttttaaat ccaaaacatc
     2281 gtgaaaattt tactggacca tcggtctcaa ataaaatttt atcatgttca gtttgagaca
     2341 aaagtacttg tttatcttgc gaatatacca tagcaggacc gtatgaaaca aagcaaccaa
     2401 gatccattgc ttttgttaat tgcttcttac ttcctgcaaa ccaatgaagt aaaattccat
     2461 taatatgata ggatggcagt atagaaaaaa tttcatctag tgtctttcgc gaatgaacag
     2521 acactggttt ctgtagtttt tcagccaaag ataacatctt ttgaaaaatc tgaatttgtt
     2581 tattgaaatc agattcattg gaaacatagg ttttatcaag accaatttca cctataccag
     2641 aaatttgttt agagttctct tcgatgagat caaccattgg ctgtaaatcg tcatttgctt
     2701 tttctggatg tatgccaatg aaaggcaaaa tcaatgggct ttctttacat aagtctaaag
     2761 tggcctttga acttgaataa tcaactgata cacagcatgc ctttatcttc atcttgttca
     2821 tggctgtgat tattgactgt agatcaggtt tgaattcgct atctgacaag tgaatatgaa
     2881 catcggtaag ccaattcgtt gtcaaacaga gatataacca taaaatagtg tgtataaatc
     2941 gatccatgcg tagtcttttt tctacttgaa atcttttatc atcgagtctt aaagttagga
     3001 tatgacaaca tctgagtttg gcctatctgt aatgtacaga attttgaaaa aggcaggcgc
     3061 tgaaagggta agtgacgagt cggcaagcga actgagaaga atattggaag aaattggcac
     3121 atctattgct aaaagtgctg tagaaatgtc ggttcatgcg ggcagaaaaa caatcaaagc
     3181 agaagacgtt a
//
LOCUS       DASPUS010000071         2569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_36789, whole genome shotgun sequence.
ACCESSION   DASPUS010000071 DASPUS010000000
VERSION     DASPUS010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2569)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2569
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36789"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..829
                     /locus_tag="VEJ68_01575"
     CDS             <1..829
                     /locus_tag="VEJ68_01575"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HXX05491.1"
                     /translation="AYRKYFEVIRKDLRNQYPFEATLLSKERILLNSRDKTALFALLA
                     VNKDIQYDITNDMALIKYSSTKSQEKQIKLYGITQNLDAILVFGKDGTYDNLPMNRKT
                     VVDIGACTADTSIFFTLHGANQVIAVEPYPKNFEMAKKNVKENNLENKIEVILGACGS
                     TQSSITVDPNYSSSMRSSLVKSKDGISIPVVTLEQILEKCDSDNPVLKMDCEGCEYEV
                     ILSASQNILRKFSHIQIEYHSGYRNLKKKLENSGFSVSKILSDNALRGHISAIRHDI"
     gene            899..1936
                     /locus_tag="VEJ68_01580"
     CDS             899..1936
                     /locus_tag="VEJ68_01580"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010192793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HXX05492.1"
                     /translation="MNPKSVLMIVARYPATHGHTTVIDNLCICLNKMGIRTDVGAFEF
                     DRDPPSNTGKILLNKKKSFFAGVNNLDYDIIHIHQPRVNYYLLSVKPAKTIILHYHGA
                     STIIHEINFKLSMMLHKKRISKIIAVSNAAVSQIKRIAGDLDPEVVYNGVDINFFKPG
                     LSHPYQKGVPQLLFVSALRKYKNTQTIIKAMPLLLKKYPKAHLQIVGDGEEFQNLSKL
                     IEQKGLRESVELIGNISDQKELCLRYSSCDLYLSASKIEACPVPPFEAMACGKPVVLY
                     DIEAHREIINSSSAGIIFHSEDEVEICNKISEAYENRVQLGKMARKFAEEHDWSITCN
                     KIVNIYKKFMK"
     gene            2009..>2569
                     /locus_tag="VEJ68_01585"
     CDS             2009..>2569
                     /locus_tag="VEJ68_01585"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HXX05493.1"
                     /translation="MKIMITGGFGFIGSHLCDELLKENHELTVITRNDSKKENVKHII
                     DKIKVEHADVTDFSLIEQIIEKQKPEIIFHLAGETSHKKSFENPLYDVDVNSKSTLCI
                     LEKIRKLNLECKFILGSTFIVIGKPTQLPIDEDTPTNPTTIYGANRLASENYCKIYHN
                     VYGLDTVTFRITNSFGPREQYLTPTKN"
BASE COUNT          968 a          404 c          433 g          764 t
ORIGIN      
        1 ggcatatcgt aaatattttg aggtgataag aaaagattta cgaaatcaat atccttttga
       61 agccactctg ttaagtaagg aacgaatttt gttaaattct cgtgataaaa cagcactctt
      121 tgcactgtta gctgtgaata aggatatcca atatgatatt acaaatgaca tggctttaat
      181 aaaatacagt tcgacaaaat ctcaagaaaa acaaatcaaa ttgtatggaa taactcaaaa
      241 tcttgacgca attctagtat ttggcaagga tggaacatat gataatcttc caatgaaccg
      301 aaagacagta gtggacatcg gcgcatgtac tgccgataca tcaatatttt ttacccttca
      361 tggtgcaaat caagtaattg ctgttgagcc atatccaaag aactttgaaa tggcaaagaa
      421 aaatgtaaaa gaaaacaatt tggagaacaa aattgaggtc atattgggag catgtggatc
      481 tacacagagc tcaatcaccg ttgatccaaa ttacagtagc agtatgagat catctctggt
      541 aaagtcaaaa gatggaattt ctattccagt tgtaactttg gaacaaatct tagaaaaatg
      601 tgattccgat aatcctgttc taaaaatgga ctgcgaaggc tgtgaatacg aagtaatact
      661 atcagcttcc cagaatatct tgagaaaatt tagtcatatt caaattgaat accattctgg
      721 ttacagaaat ttaaagaaaa aacttgaaaa ttcaggtttt tctgtatcta aaattttgag
      781 tgacaatgct ctccgaggtc atatctccgc aattcgacat gatatctagt attcaatttt
      841 aacaacgata attgacttct ctagattaat atgcgctaga taattgtgaa gttgaataat
      901 gaatccaaaa tcagttttga tgatagtggc aagatatcct gctacgcatg gacatactac
      961 agtaattgat aacctctgta tttgtcttaa taaaatgggt atcagaactg atgtaggcgc
     1021 atttgaattt gaccgtgatc caccttcgaa cacaggaaaa atattgttaa ataaaaaaaa
     1081 atcatttttt gctggtgtaa ataatttaga ttatgatatt attcacattc accagccaag
     1141 agttaattat tatctactct cagttaaacc tgcaaaaact ataattcttc attatcatgg
     1201 cgcctctacc ataatacatg agattaactt caaattatca atgatgcttc ataaaaaaag
     1261 aatttcaaag ataattgcag tttctaatgc ggctgtttcc cagatcaaga gaattgcagg
     1321 ggatcttgat ccagaagtcg tatacaatgg agttgatatc aatttcttta aaccaggttt
     1381 gtcccatcca tatcaaaagg gagttccaca attacttttt gtcagtgctc ttaggaagta
     1441 taaaaatact caaacaataa taaaggcaat gccattattg ttgaaaaaat atcctaaggc
     1501 gcatttgcag atagttggag atggagaaga attccaaaat ctaagtaaat taatcgaaca
     1561 aaaaggatta agagaaagcg tagaattaat tggaaatatt agcgatcaga aagaattatg
     1621 ccttcgatat tcatcatgtg atttgtatct ttctgcaagt aaaatagagg catgtcccgt
     1681 accacccttt gaggccatgg catgtggaaa acctgttgta ctttacgata tagaggcaca
     1741 tagagaaatt ataaactcgt cgtcagcagg aatcatattt cattcagaag atgaagtaga
     1801 aatttgcaat aaaatttctg aagcatatga aaacagagta cagttgggta aaatggcccg
     1861 aaagtttgct gaagaacacg attggagtat tacctgtaac aaaatcgtaa atatttacaa
     1921 aaaatttatg aaataatagt ttagcttcta tgctcattta atgtaagaag aacgaacttt
     1981 taactaactc cacatataaa caccactcat gaaaattatg attactggag gttttggctt
     2041 tattggtagt catttatgtg atgaactatt aaaagaaaac catgaactca ctgtaataac
     2101 aagaaatgat tcaaaaaaag aaaatgtcaa acacataatt gataagataa aagtagaaca
     2161 tgcagatgta accgatttta gtcttattga acaaattata gaaaaacaaa agcctgaaat
     2221 aatatttcac cttgcaggag aaacatctca taaaaaatca tttgaaaatc cattatacga
     2281 tgtagatgta aattccaagt ctactctttg tattcttgaa aaaatacgaa aattaaattt
     2341 agagtgtaaa tttatactgg gaagtacttt catagtgatc ggcaaaccaa ctcaacttcc
     2401 aatagatgaa gatactccaa ctaatcctac cacaatctat ggagcaaaca gacttgcaag
     2461 tgagaattat tgcaaaattt atcataatgt ttacggttta gacactgtaa catttaggat
     2521 tacaaactct tttggaccta gggagcagta cttgactcca actaaaaac
//
LOCUS       DASPUS010000072         2220 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1403631, whole genome shotgun sequence.
ACCESSION   DASPUS010000072 DASPUS010000000
VERSION     DASPUS010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2220)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2220
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1403631"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..748)
                     /locus_tag="VEJ68_01590"
     CDS             complement(<1..748)
                     /locus_tag="VEJ68_01590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-binding protein"
                     /protein_id="HXX05494.1"
                     /translation="MSSVLKGFILFAILIGVTGIVPAFALNPVLLQNYTNPTTTGIAS
                     TSIPQITVTTDKSSYNDGDKVTIYGTTSDYISGTPVTVQIRNPIGNVVGLNQVEVGTD
                     KTYSITLTAGGSLWQAAGTYSIFVEFGSQDRTAQTTFQFSGSSISKVPNTISVDGTNL
                     SVLYTITNGKVLDIKADTQSKSLIVSIQTTADGLLTITLPRALIDAQTNGQDDQYFVL
                     NDGQEASFQEINKTSTDRTLSIPFTDGTQQI"
     gene            920..1171
                     /locus_tag="VEJ68_01595"
     CDS             920..1171
                     /locus_tag="VEJ68_01595"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011012711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit H"
                     /protein_id="HXX05495.1"
                     /translation="MIGKKEKLLIPDHIYVPKHEIMTKEDAEKVLEKYHTKPTEMPLI
                     YISDPAIRHLGVKPGDMIKITRKSPTAGESIYYRYVVEE"
     gene            1171..>2220
                     /locus_tag="VEJ68_01600"
     CDS             1171..>2220
                     /locus_tag="VEJ68_01600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010189656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit B''"
                     /protein_id="HXX05496.1"
                     /translation="MAHISHKRWPIVQDILKREGIARQHLNSYDEFLERGLQSIIDEV
                     GQIEIESAEYPYKIQLGKVKLQQPRMMELDGSITHIAPMEARLRNVTYASPIMLEASV
                     VEDGKILESRYVHIGDMPVMVRSNACILHNLSDQKLVEYGEDPNDPGGYFIINGSERV
                     IVGLEDLSYNKIIVDKETVGGNTVFKAKVYSSIVGYRAKLELVMKNDGLIVAKIPGSP
                     VDIPVVTLMRALGLESDREIAAAVSLVDEIQDDLEASFEKSGDVPTAKDAIVYISKRI
                     APGMLEEFQIKRAETLLDWGLLPHLGKHPDNRKEKALFLGEATCKLIELKLGWIIPDD
                     KDHYGNKVIKFAGQML"
BASE COUNT          736 a          356 c          454 g          674 t
ORIGIN      
        1 ctatttgctg cgttccatct gtgaatggaa tggacaatgt cctgtcagtg cttgtcttat
       61 tgatctcttg gaaagatgcc tcttgaccat catttaatac aaagtattga tcatcttgtc
      121 cattagtctg tgcatcaatt aatgcccgtg gcagtgttat tgttaataat ccatcagcag
      181 tagtttgtat ggaaacaatc aaagatttag actgggtatc tgccttgatg tctagtactt
      241 tgccatttgt aattgtatac agcacagaaa ggtttgtacc atctactgaa atggtgtttg
      301 ggactttgga tattgaagaa ccagagaatt ggaatgtagt ttgcgcggtt ctatcttggc
      361 taccaaactc tacgaatatg ctataagtcc cagctgcttg ccacaaactg ccaccagctg
      421 tcaatgttat tgaatatgtt ttgtcagtac caacctccac ctgattcaag cctacaacat
      481 ttccaattgg gtttctaatt tgtacagtta ctggtgtacc agaaatataa tcactagttg
      541 ttccatagat agttacctta tctccatcat tgtatgatga tttatctgtt gtaactgtta
      601 tctgtggaat cgaagtacta gcgattccag ttgttgtagg atttgtataa ttctggagca
      661 gtactggatt taaagcaaaa gcaggaacta ttcccgttac accaattaaa attgcaaata
      721 aaataaatcc tttcaggaca gaactcatct ggttggtgag tgattttttt tgctatttaa
      781 ggttgtggaa aaaataattt ctaagcaatg taataattca cgcggtgcag attagatata
      841 tattaacctc tcggtagagc cttcatagtt tgtggattaa ttgtgtaatt acagctaatg
      901 ttcaaaggag atttttgtat tgataggaaa aaaagaaaaa ttgctaattc cagatcatat
      961 ctatgttcca aaacatgaaa taatgactaa agaagatgca gaaaaagtgt tggaaaaata
     1021 tcatacaaaa ccaactgaga tgccgctgat ctacattagt gatccagcaa ttagacatct
     1081 tggagtaaaa ccgggtgaca tgataaagat aacaagaaaa agtccaacag ctggtgaaag
     1141 tatctactat agatacgtgg tggaagaata atggcacaca tttcacataa acgctggcca
     1201 atagtacagg acattttaaa gagagaagga attgctaggc agcacttgaa ttcttatgat
     1261 gaatttcttg aaagaggact tcaaagtatt attgatgaag ttgggcagat agaaattgag
     1321 agtgcagaat atccgtataa aatccagctt ggcaaagtaa aacttcaaca acctcgtatg
     1381 atggaactag atggatcaat aacacatatt gctccaatgg aagctcgatt aagaaatgta
     1441 acatatgctt ctcctataat gcttgaagca agtgtagtag aagatgggaa aattcttgaa
     1501 tcaagatatg ttcatatcgg agacatgccc gtgatggtaa gatctaatgc atgtatcttg
     1561 cataaccttt cagatcaaaa acttgtagaa tatggtgagg atccaaatga ccctggtggc
     1621 tattttatta tcaatggttc agaacgtgta attgtaggac tggaagatct ttcctataat
     1681 aaaatcatcg tcgacaaaga gactgtggga ggtaacactg tctttaaagc gaaagtttat
     1741 tcatcaatag ttggctatcg tgcaaaacta gaacttgtaa tgaaaaatga cggcctgata
     1801 gtagcgaaga ttcctggttc tccagtagat attcctgtag ttactttgat gagagcatta
     1861 ggattagaat ctgatcgaga aattgcagca gctgtttcac tagttgatga aatccaagac
     1921 gacttggaag cttcctttga aaaatcaggt gatgtaccaa cagcaaaaga tgctatagtg
     1981 tatatcagta aaagaattgc acctggaatg ttagaggaat tccaaataaa aagagcagag
     2041 actttacttg attggggtct gttaccacat cttggtaagc atcctgataa tagaaaagaa
     2101 aaagcactat ttcttggtga agccacttgt aagttaattg aactcaagtt agggtggatt
     2161 attcctgatg acaaagatca ttatggaaac aaagtaatca agtttgcagg tcaaatgctt
//
LOCUS       DASPUS010000073         2473 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1814557, whole genome shotgun sequence.
ACCESSION   DASPUS010000073 DASPUS010000000
VERSION     DASPUS010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2473)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2473
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1814557"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            144..1067
                     /locus_tag="VEJ68_01605"
     CDS             144..1067
                     /locus_tag="VEJ68_01605"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HXX05497.1"
                     /translation="MTCYLNHFNRKKYHQRKYLVMKVGIIGTGLMGRSIATRIIRSGH
                     KLVAYNRTKNKTKSLKKLGVRIVDSPKKVAENSDLVMIIVKDAKAVELVSFGRNGIIH
                     GKHKNLIIADVSTISPISSRKIAARFQKYGIPMIDSPIMGGPALAESGKLVMMIGGKK
                     SIYTKCKPVFDAIGEKTFYLGNNGSGDAMKLAMNLQIAILALAISEGIILAKKSGLDP
                     LTFLNVLNSTYFKTGMSINKGPNMARGKFKPSFFLSMMQKDLDEINYTAKKFGANLPT
                     TNLANKIYQEAMKKGYGALDYTGILEFLEKM"
     gene            complement(1077..2303)
                     /locus_tag="VEJ68_01610"
     CDS             complement(1077..2303)
                     /locus_tag="VEJ68_01610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008300810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HXX05498.1"
                     /translation="MSLEWISRDGKLILSARIVRTFSYGFLSVILAIYLQLVGFNEIL
                     IGFVLTATLVNSVIFNIVSSVYADKIGRRKFLILYAILMIISSIIFFMTTNYVALIIA
                     ALIGTINVTGSEVGAFLSLEQAILPQTVSDVKKRTSIFAIYNTAGTFAMAGGVLLSGL
                     PHVFSQQFGFNQISSIKILFLAYAVCAIGALAIYLMLSSKIEIHSKNHVDNSLRDLSP
                     KSRGIITKMSSLFAIDSFAGGFVIQSIVSFWFYTKFGADLTTLSYIFTIAGVLTALSY
                     MFATKIASKIGLVSTMVYTHIPSNILLILVPFAPTFPLAIGLYLARMSLSQMDVPTRQ
                     SYLMAVVKENERVAAAGITNTSRNIAQAISPSVTGVILSSVALSFPFVIGGVLKIAYD
                     IGIFLSFRKIKPPEEA"
BASE COUNT          888 a          422 c          445 g          718 t
ORIGIN      
        1 aaagcatcaa gcatgtccct acaaaacaat actgaagaag cactaacact gcttgagcag
       61 gcaataattt ctgactctca atttgctgaa aaagcagctc atgataaaga ctttgaatca
      121 ttacagaata atgaaaaatt caaatcactt gttacctaaa tcatttcaat agaaagaaat
      181 accatcaaag aaaatatctt gtaatgaaag taggaataat tggcactgga ttaatgggaa
      241 gatcaatagc aactcggatt attagatcag gacacaaatt agttgcctac aacagaacta
      301 aaaataaaac aaaatcttta aaaaaactcg gtgtacgaat agttgattct cccaaaaaag
      361 tagcagaaaa ttctgatctc gtaatgataa tagtaaagga cgccaaagca gtggaactgg
      421 tttcctttgg aagaaacggc atcatacatg gtaaacataa aaatctcata atagccgatg
      481 taagtacaat aagtcctatt tcatcacgaa aaatagcagc aagatttcaa aaatatggaa
      541 tccccatgat tgacagtcca atcatgggag gtcctgctct tgcagaaagt ggcaaattag
      601 taatgatgat aggcggaaag aaatcaattt acacaaaatg taaaccagtt tttgatgcca
      661 ttggtgagaa aacattctat cttggcaata acggttcagg agatgcaatg aaactagcaa
      721 tgaatttgca gattgcaatt ttggcactag caatatctga aggaattata cttgcaaaaa
      781 aatcaggttt agatcctcta acttttttaa atgtcctgaa ttcaacctat tttaaaactg
      841 ggatgagtat caacaaaggc ccaaacatgg caagaggaaa gttcaagcca agtttctttt
      901 tatccatgat gcagaaggat ttggatgaga taaattatac agcaaagaaa tttggagcaa
      961 atttacctac tacgaatctt gctaataaaa tatatcaaga ggcaatgaag aaaggatatg
     1021 gtgcactaga ttatactgga attcttgaat ttttagaaaa gatgtaacag aatccgttaa
     1081 gcctcttctg gcggtttaat tttcctaaag cttagaaata taccaatatc atatgcaatc
     1141 tttagcacac caccaattac aaaaggaaat gacagcgcta ccgagcttaa gataacacca
     1201 gtaacagaag gactgattgc ttgagctatg tttctggatg tgtttgtaat gcctgcagct
     1261 gctacacgtt cattttcttt tactactgcc atcaagtaag attgtcgtgt tggaacatcc
     1321 atctgggata aactcattct tgctagatac aatcctattg caagtggaaa ggttggtgca
     1381 aatggaacca aaattaagag tatgttagac ggaatatgag tatagaccat tgtactgaca
     1441 agcccaattt ttgaagcaat ctttgttgcg aacatatacg ataacgcagt aagtacacct
     1501 gcgattgtaa agatgtaaga caaggtggtc agatcagcac caaattttgt atagaaccaa
     1561 aatgatacta tactttgtat cacaaatcct cctgcaaaag agtctatagc aaatagtgat
     1621 gacatttttg ttattatacc acgagatttt ggcgagagat cccgaagtga gttgtcaacg
     1681 tgatttttag aatggatctc tatcttggaa gataacataa gatagatggc taaagcacct
     1741 atggcacaca ctgcatatgc aagaaaaaga atctttatgg aactaatttg gttaaaacca
     1801 aattgttgtg aaaacacatg tggaagtcca gaaagaagca ctccaccagc catagcaaac
     1861 gttcctgcgg tattatatat ggcaaaaatt gaagttcttt tctttacgtc acttactgtt
     1921 tggggcaaga ttgcttgttc aagtgatagg aatgccccca cttctgaacc tgtcacatta
     1981 attgtaccaa taagtgcggc gataattaga gccacataat ttgtcgtcat gaagaatatt
     2041 attgaagaga ttatcatcag gattgcatac aggatcaaaa attttcttcg tcctatttta
     2101 tcagcatata cgcttgatac aatattgaag atcacgctat ttaccaatgt agcagtaagt
     2161 acaaatccaa tcagaatctc gttgaatcca actaattgaa gataaattgc caaaataacg
     2221 cttagaaatc catatgagaa tgttctgact attcttgcac taagaattag tttaccgtct
     2281 cttgagatcc attctaatga cattacttac caagtcttga tttgtatgat tcaatatcag
     2341 aagattcaac ttttttgaaa agtggagaaa taactcctaa cttatgtcct gattttattg
     2401 caatatttga tattgaatcc catctttgat ttgatattat atccggcatg ttgagttgag
     2461 accaaatttt ctg
//
LOCUS       DASPUS010000074         2873 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1404347, whole genome shotgun sequence.
ACCESSION   DASPUS010000074 DASPUS010000000
VERSION     DASPUS010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2873)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2873
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1404347"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1070)
                     /locus_tag="VEJ68_01615"
     CDS             complement(<1..1070)
                     /locus_tag="VEJ68_01615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05499.1"
                     /translation="MTENQNNPLGLFTYALKSSETRSKYIRKIQNFFDFLGLEGTIQE
                     QAEILLSDIKKNQEGWITSKMMDYIQFHKARAEKGEIAFSTVRNYYKPVKLFLEMNDI
                     QVVWKKIIRGLPRGRKFADDRAPTLAEIQKLVEYPDRRIRAIVFTMCSGGIRLGAWDY
                     LRWSDITPIERDGKVIAAKMTVYSGEPDHYITFISPEAYSELKKWMDIRKEAGENVSG
                     NSWLMRDLWDMEKFSRGLVTVPKKLQSAGIKRLMERALKGQGLRKNLPEGKRRYEFQA
                     DHGFRKFFKTQAEQVMKPINVEILMGHSTGISDSYYRPNEGNLLEDYIKAIPEFTISK
                     ENRMNNDIEKLKTSSSDNEKTK"
     gene            complement(1121..1194)
                     /locus_tag="VEJ68_01620"
     tRNA            complement(1121..1194)
                     /locus_tag="VEJ68_01620"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1158..1160),aa:Lys,seq:ttt)
     gene            1292..1399
                     /locus_tag="VEJ68_01625"
     tRNA            join(1292..1306,1340..1399)
                     /locus_tag="VEJ68_01625"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1361..1363,aa:Asp,seq:gtc)
     gene            complement(1448..2251)
                     /locus_tag="VEJ68_01630"
     CDS             complement(1448..2251)
                     /locus_tag="VEJ68_01630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010194121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HXX05500.1"
                     /translation="MEPIQVLEKAARRVYDNVKHLPGTRESAGDFGRGAGGDISRGID
                     ILAEKTVLDYLKEINFSCTVLGEECGRIEILDKSRGYIVMDAVDGSTNAVRGIPFSCC
                     SLAFATGDKLSSVTDAVIIDLYTGDLYSASKGKGAFMNGKRIQVHKEQPLYFVVGLDI
                     SGITSESLQRLSPIISASNHIRHFGAVALELAIFARGLVDLFVDIREKLRVTDVAAGC
                     LIATEAGGIIVGKNGKPVESNLSYDARISFIAASSKEILNETMKKLELQ"
     gene            2338..>2873
                     /locus_tag="VEJ68_01635"
     CDS             2338..>2873
                     /locus_tag="VEJ68_01635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008301045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05501.1"
                     /translation="MSSKDESVFSKEALISTKQGKDIVKQALFKSKGYRQFDKYKKEA
                     EEEFPKFTKRFTEDLLREIKSDANPSESQDEFAAEVGSKEIVLEKSQIETVKKRLENY
                     ETLQDRVSRILNSNFVKMTFPVFSALYDAASQHFGDTNDMKKKTEIVDGHIIAIDLSE
                     PMDRIMDRDEDVDYLDDY"
BASE COUNT          853 a          606 c          501 g          913 t
ORIGIN      
        1 ctcttggtct tctcgttgtc agatgaactg gtttttaatt tttcaatatc attattcatc
       61 ctattctcct ttgaaattgt aaattctggt attgctttga tataatcctc aagaagattg
      121 ccttcatttg gtctgtaata gctgtcagat attcctgtag aatgacccat caggatctca
      181 acgtttatcg gtttcattac ctgctcagct tgggtcttga agaactttct aaatccgtgg
      241 tctgcctgaa attcatacct cctcttcccc tctggaagat tcttcctcaa cccctgtccc
      301 ttgagtgcac gctccatcaa tcgctttatc ccagctgact ggagtttttt tggaaccgtc
      361 accaatcccc ttgaaaactt ttccatatcc cacagatccc tcatcaacca cgaatttcca
      421 gaaacgttct caccagcttc ctttcggata tccatccatt ttttcaactc ggaatatgcc
      481 tcaggtgaga tgaatgtgat ataatgatca ggttcgccag aataaacagt catttttgca
      541 gctatgactt tgccatcacg ttcaatcggg gtgatatctg accacctgag gtaatcccat
      601 gcaccaagtc tgattccccc agagcacatg gtaaagacaa tagccctgat tctcctgtct
      661 ggatactcta ccagtttttg gatctccgcc aaggttggag ccctatcatc tgcaaatttt
      721 cttccccttg ggagaccccg aataattttc ttccagacta cctgtatgtc attcatttct
      781 aggaagagct ttacaggctt gtagtaattc cgaactgtcg aaaaggcgat ctcccctttt
      841 tcagcccgtg ccttgtggaa ttgaatataa tccatcattt tcgatgtaat ccagccctct
      901 tggtttttct tgatatctga aaggaggatt tcagcctgtt cttgaattgt gccttctagt
      961 cctagaaaat caaaaaaatt ctgaatcttt ctaatgtatt ttgatcgagt ctcactactt
     1021 ttgagggcat aagtgaagag tcccaatgga ttgttttgat tttctgtcat ttttattacc
     1081 atggttatgt tggtatccaa ttttaagacc gttaaagaga cgggttcgcg gggattcgga
     1141 ccccggacag ccggattaaa agtccggtac tctacctggc tgagctacga acccatagcg
     1201 aagggtgtca ggtgtgtata atttagtctt ttacaaaatt tttagatgaa aagaaagctt
     1261 taaactcata tttttgtcca caatatttca cgcccttgta gtatagaggg gatgtggaaa
     1321 aattccaatc cttgtataac ccggtctaga atggggccct gtcacggcct cgacgcgagt
     1381 tcaaatcccg ccaagggcgc tacatctttt taaaaatttg aaaccacaaa atttctatta
     1441 tttaatttta ttgcaattct aattttttca tcgtttcatt tagaatttct ttgcttgatg
     1501 cagcaataaa tgatattctt gcatcgtagc tcaaatttga ttcaacaggt tttccatttt
     1561 tacctactat tataccgcct gcttctgttg caattaaaca acctgcagca acatcagtca
     1621 ctctaagttt ttccctaata tctacaaaca aatctactaa cccacgagca aatattgcta
     1681 gttctagtgc tacagcccca aaatgtctaa tgtgatttga tgcagaaatt attggtgaca
     1741 gtctttgtag agactcggat gttattccag atatatcgag acctacaaca aagtaaagtg
     1801 gttgttcctt gtgtacctga atcctttttc cattcatgaa tgcacctttt ccttttgatg
     1861 cagaatatag atctccagtg tacagatcaa ttatcacagc atcagtaaca gaactcaact
     1921 tatctccggt agcaaaggct agtgaacagc aagaaaatgg aattcccctt actgcattag
     1981 ttgaaccatc cacagcatcc attacgatgt atcctcgtga tttatctaaa atttcaatac
     2041 ggccacattc ttctccaaga acagtacacg aaaaattgat ctctttgaga taatcaagaa
     2101 ctgtcttctc cgctaaaata tctattcctc ttgagatgtc tccccctgcg cctctaccaa
     2161 aatctcctgc agattctctt gttcctggca aatgttttac attgtcataa actcttcttg
     2221 ctgctttttc aagaacttga attggttcca caaattttct aatgcaggtc ctaatttatt
     2281 tcaaataata aaaaattcag ctcaatgcat aaatagcaaa agaagatgtg ccaatgtgtg
     2341 agtagtaaag acgagtccgt ttttagcaag gaagcattaa tatcaacaaa acaaggtaaa
     2401 gatattgtaa agcaagcgct gtttaagagt aaaggctaca gacaatttga caagtacaaa
     2461 aaggaagctg aagaagaatt tcccaaattt acaaaacgat ttacagaaga tttgttacga
     2521 gagataaaat ctgacgctaa tccttcagaa tcacaagatg aattcgctgc tgaggtaggc
     2581 tcaaaggaga ttgtattaga aaaatctcag atagaaacag taaaaaaaag acttgaaaac
     2641 tatgaaacat tacaagacag agtatctaga attcttaatt ccaactttgt caaaatgaca
     2701 tttccagttt ttagtgcctt gtatgatgct gcatcacaac attttggtga tacaaatgat
     2761 atgaaaaaga agactgagat agtggatggt catataatcg caatagatct cagcgaacca
     2821 atggatagga taatggatag agatgaagat gtagactatc ttgatgatta caa
//
LOCUS       DASPUS010000075         2382 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1541846, whole genome shotgun sequence.
ACCESSION   DASPUS010000075 DASPUS010000000
VERSION     DASPUS010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2382)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2382
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1541846"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /locus_tag="VEJ68_01640"
     CDS             <1..603
                     /locus_tag="VEJ68_01640"
                     /inference="COORDINATES: protein motif:HMM:NF017013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOFRL family protein"
                     /protein_id="HXX05502.1"
                     /translation="DAKRILIKHGLKNKIPKNVWDRIDLGVNKLIQETPKKAKMKNYV
                     ISSNKNSLDAMSKIAKKSGLAPKIVSQISGNVESTASKLAKILPSTTNTCLIFGGEPT
                     VKVKGRGKGGRNQELVLRLLNKLLKEKSNFIISSIGTDGIDGNTDAAGAMVISDNASK
                     GIKKYLDNNDSYSYFKKYGGLIFTGPTHTNLMDIGLILRV"
     gene            complement(592..978)
                     /locus_tag="VEJ68_01645"
     CDS             complement(592..978)
                     /locus_tag="VEJ68_01645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010190411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05503.1"
                     /translation="MDHTYYFDGNMKKISWMITTNETKVEQVRTHTENYYDKVSAEQS
                     KYVSLHVGIFWSIGRFIIRNGDAVKVMVDQKLMFDHLTKNKKSDDPFIESRISFINQL
                     IDQRGLDVQYQLIEPKNNLATKLLDS"
     gene            1055..1261
                     /locus_tag="VEJ68_01650"
     CDS             1055..1261
                     /locus_tag="VEJ68_01650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008299161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05504.1"
                     /translation="MLEANSFFTSMVDELVEFSEYDPELAEGLKWIDGEAQKRGITFY
                     EMVFDVLHRYDVDSRAKNWLANRN"
     gene            complement(1258..1437)
                     /locus_tag="VEJ68_01655"
     CDS             complement(1258..1437)
                     /locus_tag="VEJ68_01655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05505.1"
                     /translation="MKIPFGIIILIGCLLIGVYVMADYIIPKVICKIVPRGSVKLYAG
                     QYNPNVFGDICSAIT"
     gene            complement(1490..>2382)
                     /locus_tag="VEJ68_01660"
     CDS             complement(1490..>2382)
                     /locus_tag="VEJ68_01660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HXX05506.1"
                     /translation="QSRVAELGMYDKEKGDSREANYNRAIDLISKIPIIVAYWDRIRS
                     GKDIIRPSKKLNHAANFLYMLTGKEPDSEIARIFDICLILHAEHSFNASTFAAREVAS
                     TRAHIYNAVSAAVGALSGELHGGANFQVMKMLLEIGTEERVESWVKAKLVEGQRVMGM
                     GHAVYKTFDPRAEVLRELSRRLAEKTGQPWYKITKRVEEITEQEMKKVKGSDIFPNVD
                     LYSASAYYMLDIPMDLNTPIFAIARVAGWTAHVIEEKFAEAQPKPMLYRPKAVYVGKY
                     CGPSGCEYVPIEKRIQQIQT"
BASE COUNT          730 a          461 c          412 g          779 t
ORIGIN      
        1 gacgccaagc gaattctgat aaaacatggt ctaaaaaata agatcccaaa gaatgtttgg
       61 gaccgaattg atcttggtgt taacaaatta atccaagaga cacctaagaa ggcaaaaatg
      121 aaaaactatg ttatttcgtc aaacaaaaat agccttgacg caatgtcaaa gattgcaaaa
      181 aaatccggtc ttgctccaaa aattgtgtcg caaatttcag gaaacgtaga aagtaccgca
      241 tcaaaactcg caaaaatact tccatccaca accaacacat gccttatttt tggcggcgaa
      301 cctactgtca aagtaaaagg cagaggaaaa ggtggaagaa atcaagaatt ggtattgcgt
      361 ttgctaaata aattgttaaa agaaaaatct aattttatta tatcatctat cggaactgat
      421 ggaatagatg gcaatactga cgcagcagga gcaatggtaa tttctgataa tgcttcaaaa
      481 gggatcaaaa aatatctaga taataacgac tcttattcat attttaaaaa atacggtggg
      541 ttaattttca caggaccaac ccataccaat cttatggata ttggattgat tttacgagtc
      601 taatagttta gttgcaagat tattttttgg ctcgatcaat tgatactgaa catccaagcc
      661 tctttgatct attaactggt tgataaaact gattctggat tctatgaatg gatcatcact
      721 ttttttattt tttgttagat gatcaaacat taatttttga tcaaccatca ccttaacagc
      781 atcaccattt cttattatga atctgccaat actccagaat attcctacat gaaggctaac
      841 gtattttgat tgttctgctg agactttatc ataataattt tctgtatgtg ttcttacttg
      901 ttctactttt gtctcattgg tagtaatcat ccatgagatc tttttcatgt ttccatcaaa
      961 atagtatgta tgatccatat gtcaatcaaa aaggcgttga ttgtctatat attttgaata
     1021 tatgactgaa taacaaaaat aaaaatctgg tatcgtgctg gaagctaatt ccttctttac
     1081 aagtatggtg gatgaactgg tagaattttc agaatacgat cctgaacttg cagaaggatt
     1141 aaagtggata gacggcgagg cacaaaaacg tggaataaca ttttatgaga tggtatttga
     1201 tgtgcttcat agatatgacg tagattctcg cgcaaagaat tggttagcta acagaaacta
     1261 agttattgca gaacaaatat ctccaaagac atttggattg tattgccctg catacagttt
     1321 gacacttcca cgcggaacaa ttttacaaat cacttttggt atgatgtagt cagccattac
     1381 atacacacct attagcagac atccaattaa aataataatt ccaaacggta ttttcattga
     1441 atcacaggat aaagatctca tataagaatc atagaactag ttgtcagatc taggtttgaa
     1501 tttgttgaat tcttttttct atcggaacat attcgcagcc tgaaggccca cagtattttc
     1561 ctacgtatac tgcttttggg cgataaagca ttggctttgg ctgggcttct gcaaactttt
     1621 cttcaatcac atgtgcagtc catcctgcaa ctcgtgcaat tgcaaaaatt ggtgtattca
     1681 gatccattgg tatgtctagc atatagtagg cggatgcact gtaaagatct acattaggaa
     1741 atatgtccga gccctttact ttcttcatct cctgctcagt tatctcttcg actctttttg
     1801 ttattttata ccatggctgt cctgtcttct ctgcaagtct tcttgaaagc tctcttaata
     1861 cctctgctct tggatcaaac gttttgtata ctgcatggcc cattcccatt accctttgtc
     1921 cttctacaag ttttgcttta acccaacttt caactcgctc ttcagtacct atttctaaca
     1981 gcatcttcat tacttggaaa tttgcgccac catgtaattc tccgcttagt gctcccactg
     2041 cagcactgac ggcattgtaa atgtgagcac gtgtggatgc aacctctctt gctgcaaaag
     2101 ttgatgcgtt aaaactgtgc tcagcatgca aaataaggca aatatcaaag atcctagcaa
     2161 tctcagaatc aggttctttt cctgttagca tataaagaaa gttcgctgcg tggttgagct
     2221 tctttgatgg tctgatgatg tctttcccac ttcgtatcct atcccaataa gcaactatga
     2281 ttggaatctt ggagatgaga tctattgctc tattgtaatt tgcctccctg ctatctcctt
     2341 tctctttgtc atacattcca agctctgcaa cccgtgattg aa
//
LOCUS       DASPUS010000076         2969 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1138522, whole genome shotgun sequence.
ACCESSION   DASPUS010000076 DASPUS010000000
VERSION     DASPUS010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2969)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2969
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1138522"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VEJ68_01665"
     CDS             complement(<1..280)
                     /locus_tag="VEJ68_01665"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2 family
                     protein"
                     /protein_id="HXX05507.1"
                     /translation="MAVPDGIGFLRKDPVLCDIINVVGEFSLKRRNHHFAVLVESIIS
                     QQLATKAAEAIFDRFKSLYPKFPTASQILATKKSKLRSVGLSGMKVEYI"
     gene            complement(282..1640)
                     /locus_tag="VEJ68_01670"
     CDS             complement(282..1640)
                     /locus_tag="VEJ68_01670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HXX05508.1"
                     /translation="MSLQNIKTNALRISLVMILSAFVVELFTGIFSNSLALITDSAHA
                     VLDSIVTAILLVAARWATKPPDREHTYGHGKIETMGSFAGGIIILIIACFFIFESISR
                     FYEPRPAILPGIFAVGAAVYTLFSDVVRVAILRRALRKSDGSLLRVDFYHAFMDMSAT
                     SVALVGIALVIWGFYQADYIAALILGVFLAALSFKVIHKAGMELTDAIPESMLRKVHD
                     IVDSTEGVMKTESLQMRRAGSDIFAEVTISLSGTSSFEQAHKISANVEKNIKDSIANS
                     NVTVHFEPIWKDTPLDYVINNSASSVKGVAGIHNINYSTTDEGIFISLHVMVERNMSL
                     EDAHKVSDEIEEKIKKSVDNVNHITIHLEPYVSIPKSIPVEDLTIEEQVASIIKDYPS
                     VKKIGRVITFQLQDIYKVDIDCSFAGDLTIEQVHDIVSEIEYKIKNQIKNAIVTIHPE
                     PS"
     gene            complement(1637..2404)
                     /locus_tag="VEJ68_01675"
     CDS             complement(1637..2404)
                     /locus_tag="VEJ68_01675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010194815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIO1 family regulatory kinase/ATPase"
                     /protein_id="HXX05509.1"
                     /translation="MDSFLVPISKLAKEPYSFILGYPEATKSEISGRASELRKLGIKN
                     VSFQGPTLLNNIPVLGKGYVGVVVLSRQGKKDVALKIRRTDSSRNEMRSEAKFLKLAN
                     KVNVGPKVIKSSKNFIIMEYIDGRKIIDWVRELKGRGSAAKLKTVIRKVLEDCFSLDR
                     INLDHGELSYIHKHVIVGKSPCIIDFESASANRRTSNVTSATQGIFIGSGLANIVKKT
                     IKTPARDDLIKSLKKYKHDQSRENFDGVLRVLGLNKI"
     gene            complement(2376..>2969)
                     /locus_tag="VEJ68_01680"
     CDS             complement(2376..>2969)
                     /locus_tag="VEJ68_01680"
                     /inference="COORDINATES: protein motif:HMM:NF045300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HXX05510.1"
                     /translation="AFLKKPSIAFFNGKSRSPNAKNLRNAIVVRFRYKWRSPDIIWGQ
                     VKRGTTALAGQLELGGFQVLRKAAITDEKSEAAMIFLLRSPHIENFMVKNGPDIYRKA
                     DSEIFIEKNSKNMLIWVDETGRVLSMQQRDLDDAKKFLEFHLKKNLSKSGVPSGIIPD
                     VKRGFKVLRGDQPVSKSIKKALSELTSTDGLVFGTNK"
BASE COUNT          813 a          628 c          531 g          997 t
ORIGIN      
        1 tgatatactc tactttcata cctgacagac caactgaacg aagctttgat tttttggtgg
       61 caagtatttg ggaagcagtc ggaaattttg gataaaggct cttgaatcta tcaaagattg
      121 cctctgctgc ctttgttgca agctgttgag atattatgga ttctactagt actgcaaaat
      181 gatggtttcg tctttttaat gaaaactctc ctacaacatt aatgatatca cataatacgg
      241 ggtcttttct aagaaaacca ataccgtctg gtaccgccat atcagctcgg ctctggatgt
      301 atggttacga tggcattttt aatttgattt ttaattttgt attctatttc tgatacaata
      361 tcatgaactt gttcgattgt aagatcacca gcaaatgaac agtcaatgtc taccttgtaa
      421 atgtcctgca actggaaggt aatgacacgg ccaatcttct taacggaagg ataatctttg
      481 ataatgcttg caacttgttc ttctattgta agatcttcta cgggaatact ttttggaatg
      541 gaaacatagg gttcaaggtg gattgtgatg tgattcacat tatcaactga tttttttatc
      601 ttctcttcta tttcatctga tactttgtgt gcatcctcaa gggacatgtt tctctcaacc
      661 atcacatgca agcttatgaa aataccctca tcagttgtcg aatagttaat gttgtgaatt
      721 ccagctactc ctttgacaga agaagctgaa ttattaatta catagtcaag tggcgtgtct
      781 ttccagattg gctcaaagtg aactgttaca ttgctatttg caattgaatc cttgatattt
      841 ttttcaacgt ttgcacttat tttgtgagcc tgctcaaaac ttgatgtacc actaagagat
      901 attgtgacct cggcaaaaat atcactgcct gctcttcgca tctgtaaaga ctctgtcttc
      961 ataacaccct ctgtgctatc aacaatgtca tgcacctttc tgagcatgct ctcaggtata
     1021 gcatctgtga gctccatccc agctttgtga atcaccttga agcttagtgc tgcaaggaaa
     1081 actcctagga ttaatgctgc aatatagtct gcctgataga atccccagat tacaagtgct
     1141 attccaacaa gagcaactga ggtggcactc atgtccataa acgcatggta aaaatcaact
     1201 cttagcaagg aaccatctga ctttctcaag gccctgcgca aaattgctac tctgactacg
     1261 tctgagaaga gagtgtagac agctgctcct actgcaaaaa ttccaggtag gattgctggg
     1321 cgtggttcgt agaaccttga gattgattca aatataaaaa agcaagctat gatgagaatt
     1381 ataattccgc ctgcaaaact tcccatggtt tctatcttac catgtccata ggtgtgctct
     1441 ctgtcaggtg gctttgtagc ccatcttgcc gcaacaagca aaattgcagt aactattgaa
     1501 tcaagtactg catgagcact atctgtaatt agtgctagac tgtttgaaaa aatccctgtg
     1561 aaaagctcta ctacaaaagc agatagtatc atgacaagtg agatccttaa tgcatttgtt
     1621 ttgatatttt gtaaactcaa atcttgttca accccaatac tcttagcacc ccatcaaagt
     1681 tttctcgtga ttgatcatgt ttgtattttt ttaaagattt gatcaagtca tctctggctg
     1741 gtgtctttat ggttttttta acaatgtttg caagacctga accaatgaag attccttggg
     1801 ttgccgatgt tacatttgag gttcttctgt ttgcactagc gctttcaaaa tcaataatgc
     1861 aaggagattt acctacaatg acatgtttgt ggatgtaact taattcccca tgatcaagat
     1921 ttatcctatc caaactaaaa caatcttcta ggacttttct aattacagtc ttaagttttg
     1981 cagcactgcc tcttcctttg agctctctta cccaatcaat tattttcctt ccgtcgatat
     2041 actccattat tatgaaattt ttgctactct tgattacctt tggacctaca tttactttgt
     2101 ttgccagctt tagaaatttt gcttcgcttc tcatctcatt cctacttgaa tctgttcgac
     2161 gaatcttcaa agctacgtcc tttttgccct gccttgagag taccaccacc ccaacatacc
     2221 ctttgcctag aactggaata ttgtttaaca aggtcggacc ttgaaatgag acgtttttga
     2281 tgccaagctt tctcaactcg gatgcccggc cactaatttc cgactttgta gcttcgggat
     2341 atcctagaat aaaagaatac ggctcttttg caagtttact tattggtacc aaaaacgagt
     2401 ccatcggtag aggtaagctc tgacagtgcc tttttaatgg atttgcttac aggttggtct
     2461 ccacgaagaa ctttgaagcc acgtttaacg tctggaatta tgccgcttgg tacacctgac
     2521 tttgacaggt tcttcttcaa atgaaactct aggaactttt ttgcatcatc aagatctctt
     2581 tgttgcatag acaaaactct tccagtttca tctacccaaa ttagcatgtt ttttgaattt
     2641 ttttcaataa agatctccga gtcagctttt ctgtaaatgt caggaccatt ctttaccatg
     2701 aaattttcaa tatggggaga acgcaaaagg aagatcattg cagcttcaga cttttcatca
     2761 gtaattgctg ctttacgcaa cacttggaac ccgccaagct caagctgtcc tgccaaagcg
     2821 gttgttcctc ttttgacctg tccccaaatt atatcggggc tgcgccactt gtacctgaat
     2881 cttacaacta ttgcatttct caaattcttg gcattaggtg acctactctt gccattgaaa
     2941 aatgcaattg atggtttttt tagaaatgc
//
LOCUS       DASPUS010000077         6429 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1685815, whole genome shotgun sequence.
ACCESSION   DASPUS010000077 DASPUS010000000
VERSION     DASPUS010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 6429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6429)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6429
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1685815"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..425)
                     /locus_tag="VEJ68_01685"
     CDS             complement(<1..425)
                     /locus_tag="VEJ68_01685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YHS domain-containing protein"
                     /protein_id="HXX05511.1"
                     /translation="MARDPICGMFVEEKNDTINCELEGRKYYFCCKSCLDEFAMPEKE
                     LKKLKRHVGLSIILTIPIILLTYLTLFPHQLNSYILFALATPVQFWLGWRFYQGTFDA
                     FKHKMTNMDVLIAIGTSTAWSYSTIVTFVHNIFPMADVY"
     gene            complement(785..910)
                     /locus_tag="VEJ68_01690"
     CDS             complement(785..910)
                     /locus_tag="VEJ68_01690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05512.1"
                     /translation="MQNTKHIVNVKQLESVTVGVTVNVLIVEIPNINTDSLIFLF"
     gene            1039..2235
                     /locus_tag="VEJ68_01695"
     CDS             1039..2235
                     /locus_tag="VEJ68_01695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016939534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HXX05513.1"
                     /translation="MQNLGSNEGKKALVYVCFILFSIIFVGIVFALTSKFSMAVSDQS
                     YSSWLIISYLAGLSMIILPCTLPFAFVIVPMSMNNGYKKGLATALLFGAGMTVTLTLY
                     GTTLGYLGKATGLNQIYNILMLIAGIISYVYGLHRLKIVNIHMPSYSGIPKFVEKGGD
                     YSKPYLMGMLVGNAGVGCTNPLFYMMLIYIMGTGSAQIGASLGFVHGVGRAIPLILIA
                     ILAMLGFNPLTGLAAKRDKLERVSGVLLVIIGSFLIINGIPEGQQWYMQYISHGLWND
                     VVNMLHLPKELSLGMMPGETMQGMSGMTGMSGMDNMSTEAQNTSIPMESIPIIIAILI
                     GSPFAWYFIHGRKKTELYVMKDLVCGMEVKEKKYSTKHNGKEYLFCCAHCKTTFENNP
                     KQFVKE"
     gene            complement(2247..2723)
                     /locus_tag="VEJ68_01700"
     CDS             complement(2247..2723)
                     /locus_tag="VEJ68_01700"
                     /inference="COORDINATES: protein motif:HMM:NF013209.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR family transcriptional regulator"
                     /protein_id="HXX05514.1"
                     /translation="MKYQENRFQKIVLVIQNNPGIRFRELMRKSGTPNGTLIHYMDKL
                     ERLDTVEIKRSPKECRFFPNSLSDMEQKIIVVLRKKSQRNILILLQKEITSFSDICKA
                     TGLAPSTVSPKLKALVEMNMVEYRYKDRLKKFKIKHPEKISEIVKKYQDIIKIAEP"
     gene            3524..6103
                     /locus_tag="VEJ68_01705"
     CDS             3524..6103
                     /locus_tag="VEJ68_01705"
                     /inference="COORDINATES: protein motif:HMM:NF013955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IPT/TIG domain-containing protein"
                     /protein_id="HXX05515.1"
                     /translation="MFKKILAITFAVILLSTVALSNITIPAEAVPQTSIMVNAISANN
                     ETLHMGVTITSGGATVQNGNTPLTFMGTKGKTYSITISNQLQTTNTNYNQTIFNHWQN
                     DNTTLPTQTITLEQNTDLTAIYNKGETIPLVDIGILQLAAHDLYNHINPNNPPTFRGD
                     NLEDERLNLSTLLDYGQQNIATGGEPRNTENIITFTVASQLGQEYLNYIKHGKTPQEA
                     RELTVQTFMTELKSAYSDTFHEPFPISAVDSDHGAGNNPQFPNDADGDLALRTLHSFV
                     PGHIVVNGTIYSILDPFLYGKTTDTKSLKGISKPLDGTYDPALLNITEPISPTQSIQI
                     NLQDRDTTFGQQFQTDFTFPQLLNEIRDGSFGQYSNSWSAFRTALENSQTAMSLSTYA
                     APPGTPVTISGVNFDSNHDNIVIQMNDVRHAPHLDTLKTSPNVITTTMGSFGNATFTV
                     PKVHPGVYTIYASNGNESASVPFTVLGLNSPHAPHMVGNVTDNNGPDLFVVNENTNTI
                     YDVGSVFNSDFTSENSTISIIDGNTDKITSVIPIDYSQIQGLAIDEKTNKFYIANVTN
                     FQYSSFMVMDGKTHKITNVIPIGDGSNGFAVNLAFDPNTNKVFVPMWDGPVLVINPST
                     LKVIDTIHTLPGDNSSYNIAINEKTDRVYVGNIFDGSVSVIDAKTDKVIGVIQEGTPD
                     SPNQCWLNDTCDTNGSHVHGVTVNEATNTIYAANELDGTFVTIDGKTDKVTKILKVVD
                     NELYGSAVDEKRNTIFQTVPYDGLVDVIDGKTNKVVDRIPMGTLPAPTGCSDFNSQVA
                     CTDYGASPQAIAINEKTGKVYVAVYPDLFNLFSGDGSIVVLDANTHHVISKTQIDFGH
                     HHK"
     gene            6319..>6429
                     /locus_tag="VEJ68_01710"
     CDS             6319..>6429
                     /locus_tag="VEJ68_01710"
                     /inference="COORDINATES: protein motif:HMM:NF041551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlcI/YnfO family protein"
                     /protein_id="HXX05516.1"
                     /translation="MSRTVSARIPTDLHEDLRERCNQLGESINDFIEAAIE"
BASE COUNT         2099 a         1181 c         1106 g         2043 t
ORIGIN      
        1 aagtagacat ctgccatcgg gaaaatgttg tgtacaaaag ttacaatagt gctataactc
       61 catgctgtgg atgttcctat tgcgatcaag acatccatgt tggtcatttt gtgcttgaat
      121 gcatcaaacg tgccttggta aaatctccac cctaaccaga actgtactgg tgttgccaga
      181 gcaaaaagta tgtacgaatt taactggtga ggaaaaaggg tgagataagt gagcaaaatt
      241 ataggtattg ttaaaattat actcaatcca acatggcgtt ttagtttttt taattctttt
      301 tctggcattg caaattcatc aaggcagctt ttgcaacaaa agtagtattt cctaccttcc
      361 agttcacaat ttattgtatc gtttttttct tcaacaaaca ttccacatat tggatcacgt
      421 gccatttaga tcatctcaaa aaaatgaaat aagtacgaaa ctaatgtcgc ttcccatgag
      481 ttccgcagct cggatccctg caatctacac aaacacaatc gcttccgcag ttgcattttc
      541 cagtcgaatc acatttgcat atagatccat gttttgcacc gcatccacat gtagccataa
      601 atgaaaatgg aaaaaatcat taataattac agtggagcat tcgacgaatg ctctattgat
      661 tttctgacta atgtgaaagt aatttagttg agagtgtaat atcaaattcg tgaataaaac
      721 tagtaattga tctttttcct ctgtaaatgc tccgcataaa ggatctcttg ccattcttaa
      781 tcaactaaaa aaggaatatg agactatctg tgtttatgtt tgggatctct acaatcaaca
      841 catttacagt tactcccaca gtcacacttt ccagttgttt cacatttaca atgtgcttgg
      901 tgttttgcac cacaaccgca ttttaccata cctttcctta ccgatgaaat aattaagttg
      961 atttctgatt atcagctttg ataataactt tgatagttgt accattgatt ttattctcta
     1021 gaatgatgaa ttagtactat gcagaattta ggctcaaacg aaggaaaaaa ggcattagtt
     1081 tacgtatgtt ttatcctttt ttccataatt ttcgttggaa ttgtctttgc actaacttca
     1141 aaattcagca tggcagtttc tgatcaatct tattcatcat ggttgataat ttcatatctt
     1201 gcagggcttt ctatgattat cctcccttgt acgttaccat ttgcctttgt aattgttcca
     1261 atgagtatga ataatggata caaaaaagga cttgcaacgg ctcttttatt tggagctgga
     1321 atgactgtta cgcttacttt gtatggtacc acacttggat atctcggaaa agctacagga
     1381 ttgaatcaaa tctacaacat actgatgttg attgcaggaa taatctccta tgtttacggc
     1441 cttcatcgcc taaagatcgt caacatacac atgccatcat attcgggaat accaaaattt
     1501 gtagagaagg gtggcgatta ttcaaagcca tacttgatgg gaatgttggt aggcaatgca
     1561 ggtgttggat gcacgaatcc attattttac atgatgttaa tttacataat gggaactgga
     1621 agtgcccaaa taggtgcttc attagggttt gttcacggtg ttggaagagc tattcctctt
     1681 atacttattg caattcttgc aatgttagga tttaatccac taactggatt ggctgcaaaa
     1741 agagacaaat tggaaagggt aagcggtgtt ttgcttgtga taataggttc attcttgatt
     1801 atcaatggga ttcctgaagg acaacaatgg tatatgcaat acatctcaca cggactgtgg
     1861 aatgatgtag taaacatgct acatttgccc aaagaacttt cgcttgggat gatgccagga
     1921 gaaacaatgc aaggaatgag tggaatgact ggaatgtctg gaatggataa catgtcaact
     1981 gaggctcaaa atacatctat acccatggaa tcaattccga taatcatcgc tattttaata
     2041 ggatctcctt ttgcttggta ttttattcat ggaagaaaga aaacggagtt gtatgtaatg
     2101 aaagatctag tgtgcggtat ggaagtcaaa gaaaagaaat actccacgaa acataatgga
     2161 aaagaatatc tattttgttg tgctcactgc aaaacaactt tcgaaaataa ccctaaacaa
     2221 tttgtcaaag aatagactat tgtgttttac ggttctgcta tttttataat atcttgatac
     2281 tttttgacaa tttctgatat tttctcagga tgtttgatct taaatttttt taatctatct
     2341 ttatatctat attcaaccat gttcatctcc acaagagctt ttaattttgg tgaaacagtt
     2401 gatggggcaa gtcctgtagc tttacagata tcagaaaacg acgtaatttc tttttgaagc
     2461 aaaatcagga tatttctctg tgattttttt cgaaggacga cgataatttt ttgttccata
     2521 tcagagagtg agttaggaaa aaatctacat tcctttggcg atcttttgat ctctacagta
     2581 tccagtcttt ctagtttgtc catgtagtgt atcaatgttc cattgggcgt accagatttc
     2641 cgcattaatt ctctaaatcg tatgcctgga ttgttctgta ttactaaaac tattttctgg
     2701 aatctatttt cttggtattt cattgaacaa caaatcgttt atctctgttt ttcaaacttc
     2761 tatgttgttg tggtaaattt cactgttaaa ttatctggta catttgacga atgtctataa
     2821 aatattataa gagaaaatta taattagaat atctttagtt tgatataatt tagaaatttt
     2881 ctacaaaatc aaaattcaaa aaagattaaa aaatccttaa atttttaaca aacaaaatga
     2941 tttctgggtt tgttctaata caattgacga ttgtaccaat tttgttaaaa ccttctcttt
     3001 ctcaaagaaa ttgagaacgc gggttggtgt atgcagacct ttacatgtca tggcgttctc
     3061 attatttttc taatttattc atgatacgag ctatgttttt tgcattggtt acaggtaaca
     3121 ccatgtttgt ctattatagt gttagaactt ccacattcta agcatatcag gattctttta
     3181 ttcaatgttc tcatacttaa ggtacctttg ttagctttgg tgaaaatatc ctttattcag
     3241 ctacttgttc ttccttggct ttcctcttga aaatagaaaa ccaatcaaat ttttgtttta
     3301 tcttttgaga attatttttt gtttttctca tgatagaaag agttcagtta tttattataa
     3361 aacgtaattg gtacatttga cgaatccctt aattttatga tataaactga taaaccaaat
     3421 aagataaaaa tgttaaaaag taaaatggtt tctgagtttg ttctagtgta atttacgaat
     3481 gtaccagcct cattaaatat aattccaaaa ttattacact tgcatgttca aaaaaattct
     3541 tgcaatcaca tttgcagtta ttttattgtc aactgttgct ttatcaaata ttacaatacc
     3601 agcagaggca gtaccacaaa cctcaatcat ggtaaacgca atctctgcaa ataacgaaac
     3661 acttcacatg ggagttacaa taacatctgg tggagcaact gtgcaaaatg gcaatactcc
     3721 gctaactttt atgggaacaa aaggcaagac ttattctatc actatatcta accaattaca
     3781 aacaacaaat actaactaca accagacaat ctttaaccac tggcaaaatg acaatactac
     3841 attaccaact caaacaataa cacttgaaca aaatactgac ctgactgcaa tatacaacaa
     3901 gggagagaca ataccgctag tagacattgg tatacttcaa ctggctgcac atgatctata
     3961 caaccatatc aatcctaaca accctccaac ttttcgtgga gataacttgg aggatgagcg
     4021 actcaatcta agcactctac tagattacgg tcagcaaaat atagcaactg gtggagaacc
     4081 aagaaacacc gaaaacatta tcacctttac agttgcatca caactaggac aagagtacct
     4141 caattacata aaacacggaa aaactccaca agaggcacgg gaacttactg tgcagacatt
     4201 tatgactgag ctaaaatctg catattctga tacattccac gagccattcc caatatctgc
     4261 agttgatagt gatcatggag caggtaataa tcctcaattt ccaaatgatg ctgatgggga
     4321 tttagcatta agaactttac attcatttgt tccaggtcat attgtagtca acggtacaat
     4381 ctattcaatc cttgatccat tcttgtatgg caaaacaact gatacaaaat ctctaaaagg
     4441 aatatcaaaa ccactagatg gcacatacga cccagcactg ttaaacatta ccgaaccaat
     4501 atcacctact caatctatcc agattaatct gcaagaccgc gatactacat ttggacagca
     4561 atttcaaacc gactttacat tcccacaact tctcaacgag ataagggatg gaagctttgg
     4621 tcaatacagt aattcatgga gtgcgtttag gacagccctt gaaaactccc agactgccat
     4681 gtctctgagt acatatgccg ctcctcctgg aacaccagtt acaatatcag gtgttaactt
     4741 tgattcaaac catgataata ttgtaataca aatgaatgat gtacgtcatg caccacacct
     4801 tgacacgctg aaaacatctc caaatgtaat tactacaaca atgggcagct ttggaaatgc
     4861 aacatttaca gtaccgaaag ttcatcctgg tgtttataca atttacgcat caaacggaaa
     4921 cgagtctgca tctgttccat ttactgtact tggcttgaat agccctcatg ctccacatat
     4981 ggttggaaac gtaactgaca ataacggacc agatcttttt gtagtaaatg aaaatacaaa
     5041 caccatatac gatgttggta gtgtttttaa ttctgatttt actagtgaaa atagtaccat
     5101 atccataata gacggaaata cagataaaat cactagtgtc ataccaattg attactcaca
     5161 aatccagggt ttagctattg atgaaaagac aaacaaattc tatattgcta atgttaccaa
     5221 cttccaatac tcctcattta tggtaatgga tggcaagact cacaaaatta ccaatgtaat
     5281 cccaataggt gatggcagca atggctttgc tgttaattta gcatttgatc ctaataccaa
     5341 caaagtcttt gtgcccatgt gggacggtcc agtactagta atcaatccaa gcactcttaa
     5401 agtcattgat accattcata cccttccagg agacaattcg tcatacaata ttgcaataaa
     5461 cgaaaagaca gacagagtct acgtgggaaa tatttttgat ggttcagtat cagtaattga
     5521 tgcaaagacg gataaagtga ttggtgttat acaagaaggt acgcctgaca gccccaatca
     5581 atgctggcta aatgatacat gtgatacaaa tggttcccat gtgcacggtg ttacagtaaa
     5641 tgaagcgaca aacactatct atgctgccaa tgaacttgac gggacatttg taacaattga
     5701 tggtaaaacg gacaaggtca ctaagatact aaaagttgta gataatgagt tgtatggtag
     5761 tgctgtagat gaaaagagaa acaccatttt ccagacagtt ccttatgacg gcttggtaga
     5821 tgtgattgac ggcaagacaa acaaggttgt ggatagaatt ccaatgggta ctctgcctgc
     5881 ccctacagga tgcagtgatt tcaacagtca agtcgcatgt actgattatg gggcgagtcc
     5941 acaagcaatt gcaataaacg aaaagacagg caaggtctat gtcgctgtct accctgacct
     6001 tttcaacctc ttctctggtg atggctctat agtcgtactc gatgcaaata cccatcatgt
     6061 gatatctaaa acgcagatag atttcggtca tcatcacaaa taagaagata actgaattaa
     6121 ttttacaaaa ttaatttttt atatatcgaa atatgatgtt attaatcatg ttaaacctca
     6181 tcatcttacc agaagtataa atcagaatat ttacaatcca aataatgaga tcttgggttc
     6241 gaatcttttt ggattcacat tcttatatcg tcttaaattg caatgatctc ttactttgta
     6301 gtatacaggt gtaaacaaat gtcaagaact gtttctgcga gaataccaac cgacttgcat
     6361 gaggatttaa gggaacgatg caatcagtta ggagaatcta tcaatgattt cattgaggcg
     6421 gcaatagaa
//
LOCUS       DASPUS010000078         2079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1269625, whole genome shotgun sequence.
ACCESSION   DASPUS010000078 DASPUS010000000
VERSION     DASPUS010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2079)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2079
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1269625"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            257..538
                     /locus_tag="VEJ68_01715"
     CDS             257..538
                     /locus_tag="VEJ68_01715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05517.1"
                     /translation="MSEDVKPNREAMWQPVEKMWTEWQNASTATGLELMKQFFAIWDN
                     ALKSYGVEPKYNFVENWKKVMDASGMEQFKAFSELMKQYSDSWLNLWAK"
     gene            complement(590..663)
                     /locus_tag="VEJ68_01720"
     tRNA            complement(590..663)
                     /locus_tag="VEJ68_01720"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(627..629),aa:Val,seq:tac)
     gene            748..1761
                     /locus_tag="VEJ68_01725"
     CDS             748..1761
                     /locus_tag="VEJ68_01725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010192211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HXX05518.1"
                     /translation="MIDLLFFSSPIGLGHATRDIAVSQYLGSFSKRFVSGEGASKLLS
                     QNGFEVEDLLRPPSFQVENGKLQNPLKWLFKYYSYYNECKTISSKVLEKEKPRILVSD
                     EDFASLVIAQKMRIRTILLTDILKTRFAKGIGSLVEKKMNQVMQKIIKKCDLVIIPEN
                     GKNHGNIIRVDPIVRELSQSRIELRKKFAFTRKTIVVSVGGTSSGKFLLEIVIETFKK
                     IHLDADLIIVSGPAIQLPQTVIRNFGFVNNLHEIIFASDLVISLAGKSTIDESKHYGT
                     PGIFIPIKGHFEQEENAKGLGFTYDDIFRLDDLILEKINEERNPQQYQGAKQAAELIR
                     KFL"
     gene            complement(1762..1902)
                     /locus_tag="VEJ68_01730"
     CDS             complement(1762..1902)
                     /locus_tag="VEJ68_01730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05519.1"
                     /translation="MSIQEGELFRDKNTNHILQYRHDFGLVHNEPLCKEITGCIDFQQ
                     NN"
BASE COUNT          728 a          344 c          397 g          610 t
ORIGIN      
        1 tgagatacaa aatactgtta acgtttaaaa attgtcagtt tttgttcccg tggattttca
       61 tagattcgga ctctcacagg tctgaaccca ctaaagattt ggatccttta agaccaaata
      121 tccaaaacga atgtcacaga ttgacaagtc tattgaagat tctaatgtac aagagttaac
      181 cccaagaatt tccaagtgtt aacctacaac atcttacaga attatcattt aatagaaggc
      241 aggttgttat acctgcatgt cagaagatgt aaaaccaaat cgggaagcaa tgtggcaacc
      301 ggtggagaaa atgtggacgg agtggcaaaa tgcatcaacc gcaacaggtt tggaactaat
      361 gaaacaattc tttgcaatat gggataatgc attgaaatca tatggagtag aaccgaaata
      421 caattttgtc gaaaattgga aaaaggtgat ggatgcatca ggaatggagc aattcaaagc
      481 cttcagcgaa ttaatgaagc agtatagtga ctcatggcta aatctgtggg ctaaatagta
      541 cgcaacaaaa ttgagaattt cttcggagga tccataccct atgaaggaat gggtccacag
      601 ggattcgaac cctggatctt cgccgtgtaa gggcgacgtc ataaccaact ggactatgaa
      661 cccatgcaag ctccaattta aaatgcattt aaactttgag gatttacaaa ggaaaaatga
      721 aaattgttct ttagatgatt tgtatacatg atagatctac ttttcttttc aagcccaatt
      781 ggattaggac atgcgacaag agatatcgca gtttcacaat atcttggcag tttttcaaag
      841 aggtttgtga gtggagaggg cgcttctaaa ttattatctc agaatggctt tgaagtagaa
      901 gatcttttga gaccaccatc tttccaagtt gagaacggaa agctacaaaa tcctcttaaa
      961 tggcttttca agtattattc gtattataat gaatgcaaaa caatctcttc caaagtatta
     1021 gaaaaagaaa aaccccgaat actagtaagt gatgaggatt ttgcctcgct tgtaattgcg
     1081 cagaaaatga gaattagaac aattctgcta accgacattc ttaaaacaag atttgcaaaa
     1141 gggattggtt cacttgtaga aaaaaagatg aaccaagtaa tgcaaaaaat cataaagaaa
     1201 tgtgatctcg taattatacc agaaaatggt aaaaatcatg gcaatattat cagagttgat
     1261 ccaatagtca gggaactttc tcaatcacgt atagaactac gaaaaaaatt tgcttttacc
     1321 agaaaaacaa ttgttgtcag tgtaggtgga acatcctctg gtaagtttct cttagaaata
     1381 gtgattgaaa cttttaaaaa aatacatctg gatgcagatt tgataatagt ttctggacca
     1441 gccattcaac taccccaaac agtgatcaga aattttggtt ttgttaacaa cctacatgag
     1501 ataatatttg cctctgattt ggtgatctca cttgccggaa aatccaccat tgatgagtca
     1561 aaacattatg gaacacctgg aatcttcata ccgataaaag ggcattttga acaggaggaa
     1621 aatgcaaagg gattaggttt tacttacgac gatatattta gattggatga tttgatctta
     1681 gaaaaaatta acgaagaacg aaatcctcaa caatatcagg gcgccaaaca agctgctgaa
     1741 ttgataagaa aattcctgta atcaattatt ttgttgaaaa tctatacatc cggtaatttc
     1801 cttgcataac ggttcattat gcactaatcc aaagtcatga cgatattgca ggatatggtt
     1861 tgtgttctta tctctaaata gttccccttc ttgaatactc atgacacttc accaaaattt
     1921 tgaagcatga aattagttat ccaatttact tttaaggaat gcgtacaaat gatctgcgtt
     1981 tatcttattt gagagatttt gagatacagt ttgaaccttg gctagccaaa ctttatagaa
     2041 ggttcaggtt gatgtaatca agttttgcag aatcttgta
//
LOCUS       DASPUS010000079         2435 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1270203, whole genome shotgun sequence.
ACCESSION   DASPUS010000079 DASPUS010000000
VERSION     DASPUS010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1270203"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..741
                     /locus_tag="VEJ68_01735"
     CDS             <1..741
                     /locus_tag="VEJ68_01735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HXX05520.1"
                     /translation="ILLDNKSILEISEEQFAKTLRWKEIAMIFQGAMNSLDPVFTVKQ
                     QFEEILKTHKFKGDAKKAMSEILNSVGLSISILDKFPHELSGGMKQRLVIAMALILKP
                     KFVIADEPTTALDVLVQAQIVSLLKKLKEAGMSLMIISHDLGIISEIADKVGIMYAGK
                     IVEFGSLAEILSNPKHPYTQALLKSVPKIKGDVNLISLKGDPPSLSDIPSGCRFYQRC
                     DKAMDKCKKDPPKIKTESGYTLCWLYDE"
     gene            complement(775..1710)
                     /locus_tag="VEJ68_01740"
     CDS             complement(775..1710)
                     /locus_tag="VEJ68_01740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05521.1"
                     /translation="MKVTPLAIVIIAGLLIVAGSAYLNKVVFADDSWSSIVQRQQASI
                     EKASMVYDNKYQFNNVPQSTRNWTGLGFVTTDSSTTGRDIPAQSQMSMENALATFDQI
                     HAQLLNYTQGNGYSGLTSVTTDESGRNRNTMIAQGMDQIDQQVAGLISQLGQISQAYA
                     SMGPVATTTGYWSNVQGNIDSTSIAQEAQASDLIKQIWQIDQQYMNLQSGGTTNSVTQ
                     GRQIAAAQLSSLEKAIQTFNIIHAHLLQRSYGSQYAGLSSTSTDEQIPGQGYRTYGDR
                     HSSIDFATQMALQNAINFYNSYYPETPLSVPNYSH"
     gene            1882..>2435
                     /locus_tag="VEJ68_01745"
     CDS             1882..>2435
                     /locus_tag="VEJ68_01745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/oligopeptide/nickel ABC transporter
                     ATP-binding protein"
                     /protein_id="HXX05522.1"
                     /translation="MEEILVVRNLKKNFVSGGFTRHKDIVRAVDDISFSIKNRETLVL
                     AGESGSGKTTLARLILGAIEHDSGEIIFDGTTITKDNLKKIRKECQMIYQDPYSSIDP
                     RMKVFDIIKEPLDIHHIGNKNERGELVFNALREVRLEPVEEISVKNPHMLSGGQRQRV
                     VIARAIVTKPKLVIADEPVSMLDVS"
BASE COUNT          773 a          424 c          500 g          738 t
ORIGIN      
        1 attctcttag ataataaatc cattcttgaa atttcagaag aacaatttgc aaaaacctta
       61 cgttggaaag aaattgcaat gatatttcaa ggtgcaatga attcactaga tcctgtcttt
      121 acagtaaaac aacagtttga ggagatattg aagacacata aattcaaagg agatgctaag
      181 aaagcaatgt cggaaatact gaattctgtt gggctttcaa tctcaatact tgacaagttt
      241 cctcatgagc ttagcggcgg tatgaaacaa agattggtga ttgcaatggc attaattctt
      301 aaaccaaaat ttgttatagc cgacgaacct actaccgcac ttgatgtatt ggtacaagca
      361 cagattgtaa gccttcttaa gaaactcaaa gaggctggaa tgtcactcat gataatttcg
      421 catgatcttg gcataatatc tgaaattgca gacaaagttg gaattatgta tgctggaaaa
      481 attgtagagt ttggaagtct tgcagaaata ctttccaatc ccaagcaccc atatactcaa
      541 gcactgctca aatcagtgcc taaaataaaa ggtgatgtaa atttaatttc cttaaaaggt
      601 gacccgccta gtttatcaga tattccatca ggctgcaggt tttatcaaag atgtgacaag
      661 gcaatggaca aatgtaaaaa ggatccgcca aagatcaaaa ctgaatctgg atacacgctt
      721 tgttggcttt atgatgaata attaaaaaga ttcgggcaaa aaatcgctgt agagttagtg
      781 agagtaatta ggtacagaca gtggagtttc cggatagtat gaattgtaga agttaattgc
      841 attttgtaat gccatctgtg ttgcaaagtc tatggaacta tgtctgtcgc cataagtacg
      901 atatccttga cctggaattt gctcatctgt cgaagtactt gaaagtcctg catattgact
      961 tccatatgat ctttgcaaga gatgtgcgtg aatgatattg aatgtctgta tagctttttc
     1021 tagggaagac aattgtgccg cagctatctg tctaccttga gtaacggaat tagttgtacc
     1081 acctgattga agattcatat attgttggtc tatttgccag atctgtttta tcaaatctga
     1141 tgcttgtgct tcttgtgcaa tcgaagtact atcgatatta ccttgtacgt tagaccaata
     1201 tccagtggta gttgcaactg gtcccatact ggcatatgct tgtgaaatct ggccaagttg
     1261 tgagataagg cctgcaactt gttgatcaat ttgatccatt ccttgggcaa tcatagtatt
     1321 tctgtttctg cccgattcgt ctgttgtaac acttgtcagg cctgaatagc cattaccttg
     1381 tgtgtaattg agaagttgtg catgaatttg atcaaatgta gccaatgcat tttccattga
     1441 catttgtgat tgagctggaa tgtcacgacc ggtggttgac gagtctgtag taacaaaccc
     1501 aagaccagtc caatttcttg tggactgtgg aacattattg aattgatatt tgttatcgta
     1561 aaccatcgat gctttttcaa ttgatgcttg ttgtcgttga actatgctag accaagagtc
     1621 gtctgcaaat acgaccttat ttagataagc agaacctgca acaataagca aacctgcaat
     1681 tataacgatt gctagggggg ttactttcac gtttttttat catatatcat ggcttttaaa
     1741 actttgcgat aataggagtt tgacaaagtg atcgcctatc taatgatttt tcagttctct
     1801 gaaagcaaac ttgagtcata atacgccctg acaaaataca gcacagttct cttgaaatag
     1861 ttgtcaagag acttagaact agtggaagag atccttgtag taaggaactt gaagaaaaat
     1921 tttgtaagcg gaggttttac acgtcataaa gacatagtca gagccgtcga tgacatttct
     1981 ttttccataa aaaacagaga aacacttgtg cttgctggcg agtctggatc gggcaaaaca
     2041 acactagcac gtttgattct aggagcaata gaacatgaca gtggcgagat tatttttgat
     2101 ggaaccacca taactaaaga taatctaaaa aagattcgaa aagaatgcca gatgatatac
     2161 caggatcctt attcgtcaat agatcctcgt atgaaagttt ttgacataat caaggaaccg
     2221 cttgacatac atcacattgg caataaaaat gagagagggg aacttgtttt taatgcatta
     2281 cgcgaggtaa gattagaacc tgttgaggaa atatctgtaa agaatcccca tatgttatca
     2341 ggaggacaaa gacagcgagt cgtcattgca cgggccattg ttacaaaacc aaagcttgta
     2401 atcgcagacg aaccagtttc aatgcttgat gtttc
//
LOCUS       DASPUS010000080         3185 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1000028, whole genome shotgun sequence.
ACCESSION   DASPUS010000080 DASPUS010000000
VERSION     DASPUS010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3185)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3185)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3185
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1000028"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1271)
                     /gene="tgtA"
                     /locus_tag="VEJ68_01750"
     CDS             complement(<1..1271)
                     /gene="tgtA"
                     /locus_tag="VEJ68_01750"
                     /EC_number="2.4.2.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016763 - pentosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(15) transglycosylase TgtA"
                     /protein_id="HXX05523.1"
                     /translation="MFEIKRSDLAGRIGILHTNHAKVETPAYVPVIHPVRQSIPAKKI
                     REMGFDLVITNAFITLKHYGNDAIKNGIHKIIDYDGAVMTDSGGYQVLEYGNIDVDYK
                     SMADFEKQIKTDIAIPLDRPTGFGLPKKRAKDYVAHTLKVSKETLENSDKNGQIWVGP
                     IQGSEYSDLVKQSTRSLVKYGYQMLALGSPVEFMESYEYQKLAKMIITAKKEMPDGIP
                     LHLFGAGHPLTIPLAVALGCDTFDSASYMLYAKHDRYIMEDGTSHLDEMSYFSCTCEV
                     CRNFKPKEMQSLPKEDRINKIALHNLYSIKAEVDRVKEAIHEGRLWEYTLKKARSHPK
                     LFETIPVYTNNTSFFKESTPRFKENAIFLFSKEDQFRPEVSRFHGMVRKFKTKKETLV
                     IVPDGGIRPFYLSNEYTKLKRKFASDIDSVQ"
     gene            complement(1305..1853)
                     /locus_tag="VEJ68_01755"
     CDS             complement(1305..1853)
                     /locus_tag="VEJ68_01755"
                     /inference="COORDINATES: protein motif:HMM:NF024635.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HXX05524.1"
                     /translation="MKIITGNPGTGKHTLSQILSKKMGLEIIDINKIAIKNKTFKRKK
                     GTLEVDVQKLKRIVNKMPKNSLLVGHLAPYIISKNKVEMAVVLRRSPYELEKVYKKRK
                     YPHEKMIENLGSEILGITYYDTIRNIGKEKTIQINTTGKSVTNISKKIKSLFLKGNAK
                     GDKVDWLALVSKNRDLQRFFSY"
     gene            1928..3121
                     /locus_tag="VEJ68_01760"
     CDS             1928..3121
                     /locus_tag="VEJ68_01760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HXX05525.1"
                     /translation="MQIGLLGKTNVGKSTFFSAATQTTAQMGNYPFTTIEPNVGIAYV
                     KTNCACKHFEIDHSHQLCINGIRYIPIKLIDVAGLVPGAHEGKGLGNKFLDDARQAQV
                     LIHVVDASGSTDIQGQSVPVGTHDPLEDVKFVEEEFDQWMVQILQREWHKLTRELESK
                     SGKIIHAITQRFSGLGIDEYDVETVLHHLNLQTKKPLDWSNEDILIFVKELRKKTRPI
                     IIAANKADLCHDLKILDEFKKIHNAIACSAETELLLRKAAKSGLIDYLPGEITFKIKE
                     GINLNPQQQKALDLAQKVLSKLGGTGVQQILDAACFDLLKLITVFPVEDETKLCNKDG
                     EVLPDAKLLPIGSTAKDLARVIHEDLAKGFLHAVDVKTKQRVGAEHQLKNGDVLKIVS
                     TLSRG"
BASE COUNT          978 a          576 c          567 g         1064 t
ORIGIN      
        1 aattgaaccg agtcaatatc agatgcaaac tttcttttta gcttggtata ttcattagac
       61 aagtaaaatg gtcgtattcc accgtctgga acaataacaa gtgtttcttt ttttgttttg
      121 aattttcgta ccattccatg aaatcttgaa acctctggtc taaactgatc ctcttttgag
      181 aataggaaga ttgcattttc tttaaagcgt ggagtagatt ctttaaaaaa agaagtgtta
      241 ttggtataaa ctggtatagt ctcaaagagt ttaggatgtg aacgtgcttt ctttaacgtg
      301 tattcccaca gacgcccttc gtggattgcc tcttttaccc tatctacctc tgcttttata
      361 gagtaaagat tgtgtaatgc aatcttgttt atcctgtctt cctttggaag agattgcatt
      421 tcttttggct tgaagtttct gcagacttca catgtacagg aaaagtatga catttcatcg
      481 aggtggctag taccatcttc catgatgtat ctatcatgct ttgcatatag catgtatgag
      541 gcagaatcaa aagtatcaca accaagggct actgccagcg ggatggtaag aggatgacct
      601 gctccaaaaa ggtgtagcgg aataccatct ggcatctctt tctttgcagt aattatcatt
      661 tttgctaatt tttgatattc atatgattcc ataaattcta ctggacttcc taatgcgagc
      721 atttgataac catatttaac aagagatctt gtagattgtt tcactagatc tgaatattca
      781 cttccttgta ttggcccaac ccatatctgt ccatttttat cgctattttc taaggtctct
      841 tttgaaactt tcaaagtatg tgcaacatag tctttagctc tcttttttgg taaaccaaat
      901 cctgtaggtc tatctaatgg aattgcaatg tctgtcttga tttgtttttc aaaatctgcc
      961 atacttttgt agtctacatc aatgttgcca tactctagaa cttggtatcc accagaatct
     1021 gtcatgacag ctccatcata atcaattatt ttatgaattc cattttttat tgcgtcatta
     1081 ccatagtgtt ttagtgtaat gaaagcatta gttataacaa gatcaaaacc catctctcga
     1141 atttttttag caggtattga ttgccttaca gggtgtatta ctggcacata tgctggagtc
     1201 tcaacctttg catgatttgt gtgtagaatt cctatgcgtc ctgcaaggtc tgatctttta
     1261 atctcaaaca tttgtactaa ggtttgaaat aacgtaattt gaatctagta tgagaaaaat
     1321 ctctgaagat ctctattttt tgaaaccaat gctagccaat caactttatc tcctttggca
     1381 ttgcccttca gaaacagtga ttttattttt tttgagatgt ttgttaccga tttccctgtg
     1441 gtgttaattt gaattgtttt ttctttacca atgtttctga tagtatcata atatgtaatt
     1501 ccaagtatct cgctacctag attttcaatc atcttttcat gtggatattt tctttttttg
     1561 tacacttttt caagctcata aggacttctt ctcaatacca ctgccatctc caccttattt
     1621 tttgagatga tatacggagc caaatgtcct accaacaatg aattctttgg cattttattc
     1681 acaattctct ttaatttttg tacgtccacc tccaatgttc cttttttcct cttaaacgtc
     1741 ttatttttga tagcaatctt gtttatgtca atgatctcaa gtcccatttt ctttgatagg
     1801 atttgtgata aagtgtgttt tccagtacct gggtttcctg ttattatctt caatgaatag
     1861 gttgaaaatt gatttcaatt aaacactttt ggaatactaa taagagcaaa caatcagcat
     1921 gattttcatg caaatcggtt tacttggcaa gactaatgta ggaaaatcca cgttcttctc
     1981 tgcagcaacc cagactactg cccagatggg aaattatcca tttactacaa ttgaaccaaa
     2041 tgtcggcatt gcatacgtta aaacaaattg tgcctgtaaa catttcgaga tagatcattc
     2101 tcaccaatta tgcataaacg gaattaggta tattccaata aaactaatcg atgttgcagg
     2161 acttgttcca ggagctcatg aaggaaaagg ccttggtaac aaatttcttg atgatgcaag
     2221 acaagctcaa gtgttgattc atgttgtaga tgcatccggg tccactgaca tccaaggaca
     2281 atcagttcca gttgggactc acgatcctct agaggatgtc aaatttgttg aggaagaatt
     2341 tgatcaatgg atggtacaaa tacttcagcg tgaatggcac aaattaacac gtgagttaga
     2401 aagtaaaagt ggaaaaatca ttcatgctat aacacaacga tttagcggac tgggcattga
     2461 cgaatatgac gttgaaacag tactgcatca tttgaacttg caaacaaaaa aaccgttaga
     2521 ttggagcaat gaagatattc tcatatttgt caaagaattg aggaaaaaaa caaggccaat
     2581 aataatagct gcaaacaaag cagatctttg ccatgatctc aaaatattag atgaatttaa
     2641 aaaaatacat aatgcaattg cttgtagtgc agaaaccgaa ctactactaa gaaaggctgc
     2701 aaaaagtggt cttattgact atctcccggg agaaatcacc ttcaaaataa aggaaggtat
     2761 caatctaaat ccacagcaac aaaaggcact ggatcttgca caaaaagtac tttcaaaact
     2821 tggaggcaca ggtgtccaac aaatattgga tgctgcatgc tttgatcttc taaaactgat
     2881 tactgtattt cctgtagaag atgaaacaaa actgtgtaac aaagacgggg aagtgttacc
     2941 tgatgcaaaa ttattgccca ttggttctac cgctaaagac ttggcaaggg taatccatga
     3001 ggatcttgca aagggattcc tccatgcagt agatgttaaa acaaagcaaa gggtaggagc
     3061 agagcatcaa ttaaaaaatg gtgatgtgtt gaagatagta tcaacactaa gtaggggata
     3121 agatgctaag tctaggaatt gaaagtactg ctcacacctt ttcatgtgca attatcgaaa
     3181 agaat
//
LOCUS       DASPUS010000081         2390 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_866180, whole genome shotgun sequence.
ACCESSION   DASPUS010000081 DASPUS010000000
VERSION     DASPUS010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2390)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2390
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_866180"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..289
                     /locus_tag="VEJ68_01765"
     CDS             <1..289
                     /locus_tag="VEJ68_01765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HXX05526.1"
                     /translation="PEEIELQIVKKYVTGPHEKEIQQAIKLANILRQAAAVEELYYSP
                     SLRETIAFGKILDTGMKARQAADIVFSNVYSQWGNVEYQKVNDIVTSLFGN"
     gene            289..1854
                     /locus_tag="VEJ68_01770"
     CDS             289..1854
                     /locus_tag="VEJ68_01770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013481368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vWA domain-containing protein"
                     /protein_id="HXX05527.1"
                     /translation="MQSLNLRSDTLIEIGTFLVRRWSGNENITVGIADQKEVQTKLKE
                     NKVVMFPIERYQGIDFQKYRQFRTALWYESMRIRHSTKILSNDHAFGFILNTLETRRI
                     ETIGRKFWQGMDEELIFNYGFSWLYRPLLNTLYGPSRLVEGFSQYFLLGDIKGELPPS
                     AFEKIQKANILASEAVKESVEKQYGTDWLEKKVSEIIKILEIDPLLTIPISMPKLSSG
                     IAMSEQEFMRTINKIAKHKESDFGEIDPKKVMEGKQVFEEFKVLLEEAKKSENKGLRT
                     EVVGISIPTATNVDETRIYDMDLINNLKAKFKEWRSGWKEQHVLSGDEFDQEMYLEAH
                     KPFITDKKIAIKTRIVILLDHSSSIAEQEVEYKKATLALCEVLDFLKVKFSVYVFNTE
                     QKKVTCWLIKPENLQWNNTTAKRLAQVKANGSTPLAEVYDLLLPTLRSKKPDIFLTLT
                     DGEPSDPDAVRFMIRDFKLVGIKMVAIGVGPDTTDATTIANNLKRLGYERTLAVSRLN
                     EIPKRVLNVLDTD"
     gene            1856..2311
                     /locus_tag="VEJ68_01775"
     CDS             1856..2311
                     /locus_tag="VEJ68_01775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010194869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HXX05528.1"
                     /translation="MKCLSVSQPYADFIIEGKKTIELRRWNTMYRGEFLIHAPLKVNK
                     EACKRLKIKEDDLRTGVIIGKVEIYDVKVYTTIAELKSDYTKHFAGKEYLHHKYGFLL
                     RNAQSLKVPIPCKGSLGFFEFKPHNAISDNAIRSELFDEEYRYQWIGKH"
BASE COUNT          879 a          366 c          476 g          669 t
ORIGIN      
        1 tcctgaagaa attgaattgc aaatagtaaa aaaatatgtc acaggtcctc atgaaaagga
       61 aattcaacaa gccataaaac ttgcaaatat tttacgacaa gcagctgcag ttgaagagct
      121 gtattattct cctagtcttc gtgaaacaat agcttttgga aagatacttg atacaggtat
      181 gaaagcaagg caagctgctg atattgtctt ttcaaatgtc tattctcaat ggggtaatgt
      241 tgaatatcaa aaagtaaatg atattgtcac gtcgttgttt gggaattgat gcaatcacta
      301 aacctgagaa gtgatacttt aatcgaaata ggtacattct tagtaagaag atggtctggc
      361 aatgaaaata tcaccgtagg tattgcggat caaaaagaag ttcaaaccaa gctaaaagaa
      421 aataaagtcg taatgttccc tatagaacga taccaaggga tagattttca gaagtacaga
      481 cagtttagaa ctgctctttg gtatgaatca atgcgaataa gacattcaac taaaattttg
      541 agtaatgatc atgcatttgg attcattcta aacacgttgg agaccagaag aatagagact
      601 attggaagaa agttctggca aggaatggat gaggaattaa tattcaatta tggattttca
      661 tggctatatc gaccattatt aaatacacta tatggcccat ctagacttgt agaagggttt
      721 tctcaatatt ttcttcttgg agacataaaa ggagagcttc ctccaagtgc attcgagaag
      781 attcaaaaag caaatatact agccagcgaa gcggtaaagg aatcagtaga aaaacaatat
      841 ggaactgact ggcttgaaaa gaaagtttct gaaattatca agattttaga aattgatccg
      901 cttctaacta ttcctatttc catgccaaaa ttaagttctg gaattgccat gagtgaacag
      961 gagtttatga gaacaataaa caagattgca aaacacaaag aaagtgactt tggagaaata
     1021 gatccaaaaa aagtaatgga gggcaagcaa gtattcgagg aattcaaagt attgcttgaa
     1081 gaagcaaaaa aaagtgagaa caagggttta agaactgaag ttgtcggtat cagtatccca
     1141 acagctacta acgtagatga gactagaatc tatgatatgg atctgataaa taatctaaaa
     1201 gcaaaattca aggaatggag atcaggctgg aaagaacagc atgtactttc aggagatgag
     1261 tttgatcaag aaatgtacct ggaagctcat aaaccattta ttactgacaa gaaaattgca
     1321 attaaaacaa gaatagtaat actgcttgat cattcttcta gcatagcaga acaagaagta
     1381 gaatacaaga aagctacact tgctctctgt gaagttctgg attttttgaa ggtaaaattt
     1441 tcggtctatg tatttaacac ggaacaaaaa aaagttactt gttggctaat taaacctgag
     1501 aacttacaat ggaataacac tacagcaaaa agacttgcgc aagtaaaagc aaatgggagt
     1561 acgccattag ctgaggtcta tgatctttta cttcccacct tacgatcaaa aaaaccggat
     1621 atctttctta ctttaactga tggagaacca tcagatcctg atgctgtacg ttttatgata
     1681 agagatttca aacttgttgg gataaagatg gtcgcaatag gtgttggtcc tgatactact
     1741 gatgctacaa caattgcaaa taatttgaaa cgattaggat acgaacgtac acttgctgta
     1801 agtaggctaa atgaaattcc aaaacgggtg ttgaatgttc tagatactga ttaaaatgaa
     1861 atgcttatcg gtctctcagc cttatgcgga tttcataata gaaggtaaaa aaacaattga
     1921 attgagaagg tggaatacta tgtatagagg tgaatttcta atccatgctc ctctaaaggt
     1981 aaacaaagag gcctgcaaaa ggctcaaaat aaaagaggat gaccttagaa ctggagtcat
     2041 cattggaaaa gttgagatct atgatgttaa ggtttacaca acaattgcag agttaaaatc
     2101 tgattacacg aaacattttg caggtaaaga ataccttcac cacaagtatg gcttccttct
     2161 aagaaatgct caatcattaa aagtacccat tccatgcaag ggaagtcttg ggttcttcga
     2221 attcaaaccc cataatgcga taagtgataa tgccataaga tctgagttat ttgacgaaga
     2281 gtacagatat caatggattg gaaaacatta gtctttgcag attagcgaga ttagattctg
     2341 atgcttggat tctctttctt gagtttttcc cagtctgcta aaaagttttt
//
LOCUS       DASPUS010000082         3148 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_181773, whole genome shotgun sequence.
ACCESSION   DASPUS010000082 DASPUS010000000
VERSION     DASPUS010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3148)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3148
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_181773"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..133)
                     /locus_tag="VEJ68_01780"
     CDS             complement(<1..133)
                     /locus_tag="VEJ68_01780"
                     /inference="COORDINATES: protein motif:HMM:NF017806.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase A"
                     /protein_id="HXX05529.1"
                     /translation="MVAIPTSLQIKMEAEKGGIPIIESDQIDHIDLVFDGADQIDANG
                     "
     gene            complement(281..1255)
                     /locus_tag="VEJ68_01785"
     CDS             complement(281..1255)
                     /locus_tag="VEJ68_01785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05530.1"
                     /translation="MEEIVLVFSSLAGACTAVALDKIPRHKHSKQTTVNSAIENQLQS
                     LKTEKEILAKTISRLHQEDSNITKVQRDKLLIRYQHQLGTIIAKMEKLETANKYPDLG
                     PIGDSLITLMDNKLSKFDQRLHEISSKLSIDTIQQVTQPTIPVQSTQIIRQQEQVKQI
                     IQEKPRSEKIEIRSEVQEEKKEIQKEKVEIPTPLIEIPVPERRRSVELSTLTEIPSKM
                     PEFPPEFIKPVQTQIEQTKIIVESIESLEVPQQIIPVEPTPLMPKENSVSIELPKPVV
                     EQVEKKIQLPTPIKIPEEEKIEDDDKDLDKIKSEIMRALSKLEQVEVE"
     gene            complement(1256..1423)
                     /locus_tag="VEJ68_01790"
     CDS             complement(1256..1423)
                     /locus_tag="VEJ68_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L37e"
                     /protein_id="HXX05531.1"
                     /translation="MTKGTTSMGGYTKKHVHIRCRRCGKNSFHARHKRCASCGYPDSR
                     IRKYNWIKWYT"
     gene            complement(1431..1661)
                     /locus_tag="VEJ68_01795"
     CDS             complement(1431..1661)
                     /locus_tag="VEJ68_01795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LSm family protein"
                     /protein_id="HXX05532.1"
                     /translation="MSVDMAIKVLDESLNKVVLIKLKGGKMIRGNLHGFDQHMNLLLD
                     SSEEIPSEGETKSLGTIVVRGDNVVIISPPPK"
     gene            complement(1707..2435)
                     /locus_tag="VEJ68_01800"
     CDS             complement(1707..2435)
                     /locus_tag="VEJ68_01800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HXX05533.1"
                     /translation="MIIRDLSNPLIFKEIRKKPIAVIPVGSIEQHGPHLPVSTDSDII
                     SYIAKKVSEKTGFLLLPTIEYGVSFEHHPFFNMSVSHSTLEKVLLDLCISLWKNKISG
                     ILILNGHHGNHKTIKKIPNKLSKVGGFKAKVLVLSYWNFMKKKMDHAGFVETSIMRAI
                     SKKVEMNKAVKGLIPSDLSKKKLDNLSKLASKSFIAATKNGVWGDPTNASAKVGRAIL
                     KEVITSIVKESQTCLTGKTRKLHQ"
     gene            complement(2432..>3148)
                     /locus_tag="VEJ68_01805"
     CDS             complement(2432..>3148)
                     /locus_tag="VEJ68_01805"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HXX05534.1"
                     /translation="YLEASFTKKFDVQKFNATAKRLANNLKMEVNIHYEATKRKRAAI
                     LVTKEPHCLQAMLEARHKNQLKGEIAVIVGTENTLTKMAKKARIPFVLISENDQTKAE
                     DKIITIMKKYNVDLIVLARYMRVLSPNFVWRYPNRIINIHPSILPAFPGAYAYVQAYE
                     RGAKIVGCTSHYVTEDLDQGPIIFQDAFAIDEKETLESLKRKGQKLEAKTLLEAVKMH
                     LEGRLEVYWGKVHVKPKRSK"
BASE COUNT          802 a          578 c          530 g         1238 t
ORIGIN      
        1 tcccatttgc atcaatttga tcagctccat cgaatactaa atcaatatga tcaatctgat
       61 ctgattctat tattggtatg cctccttttt cagcttccat tttaatttgc agcgatgttg
      121 gaattgctac tatggataaa tgatttttct ttagatgtga ttataatgat ctaactattg
      181 atgttgcagc tctaccacta cctaatccaa tgacaaagtt attctttatc atcttcaatg
      241 cttggggtga taatgccttg atggcatcat ctaatgtcaa ttattctacc tctacttgtt
      301 ctagtttgga taatgctcgc attatttcgc ttttaatttt atccagatcc ttatcatcgt
      361 cctcgatttt ttcttcttct ggtattttga taggagtagg tagttgtatt ttcttttcaa
      421 cttgttcaac tacaggcttt ggcaattcta ttgaaacaga attttcttta ggcattagtg
      481 gagtaggttc tactggaatg atttgttgtg gtacttctag tgactctatt gattcaacga
      541 taatctttgt ctgttctatt tgagtttgaa caggtttgat aaactctgga gggaattcag
      601 gcattttgct tggtatctca gttagagtac ttaattcgac tgacctgcgt ctctctggaa
      661 caggaatctc aatcaatggc gttggtatct ctaccttttc tttttgaatc tctttctttt
      721 cttcctgaac ttcgcttcta atttctatct tttcagatct aggtttctct tgtatgattt
      781 gcttgacttg ttcttgttgt ctaatgattt gtgttgattg tactggtata gttggttgcg
      841 taacttgttg tatcgtatct attgatagtt ttgaagaaat ttcatgtaat ctttgatcaa
      901 actttgaaag tttgttatcc attaaagtga ttaggctatc tcctataggt ccaagatcag
      961 gatatttgtt ggcagtctcc aacttctcca tcttagcaat gatggttcca agttggtgtt
     1021 gatatctgat taaaagtttg tcacgctgta cctttgtaat gtttgaatct tcttgatgaa
     1081 gccttgaaat tgtctttgct aaaatttctt tttcagtttt taatgattgt aattgatttt
     1141 ctattgcaga attcacagtg gtttgcttgc tgtgtttgtg tcttggaatc ttatctaatg
     1201 caactgcagt gcaggcgccg gctagagaac taaaaactag tacgatctct tccatttacg
     1261 tataccattt gatccagttg tactttctta ttctagaatc tggataacca caacttgcac
     1321 atcttttgtg tcttgcatga aaagagttct ttccacatct tctacatctg atatgaacat
     1381 gtttctttgt gtatcctccc atggaggttg tgcctttagt cattgtactt tcactttggt
     1441 ggaggagata tgataactac attatctcct cttacaacta tggttcctag actctttgtc
     1501 tctccctcag aagggatctc ttctgatgag tcgagtagca aattcatgtg ctgatcaaag
     1561 ccgtgaagat tacctcttat catcttgcct cctttcagct tgatgagaac aactttgttc
     1621 aagctttcat ccaacacttt tattgccatg tcaactgaca tttatttcac ttattaccca
     1681 ctctatcgag ggtatatatt aaaatttcat tggtgtaatt ttcgggtttt accggtgagg
     1741 caagtttgac tctctttgac tatggaagta attacctcct tcagaattgc tcttccaact
     1801 ttagcagaag cattggtggg atccccccac actccattct ttgtagccgc tatgaatgat
     1861 ttacttgcaa gtttgcttaa attatctagt tttttctttg ataaatcact tggaattaga
     1921 ccttttaccg ctttattcat ctcaactttc ttagatattg cacgcattat tgaagtctct
     1981 acaaatccag catgatccat cttttttttc ataaaattcc aataagaaag gactaagact
     2041 ttggccttaa aaccacccac ttttgaaagt ttattcggta ttttttttat tgttttgtgg
     2101 tttccatgat gaccattgag gattaaaatt ccactaatct tatttttcca gagtgatatg
     2161 cacaaatcta acaagacctt ctccaaagtt gagtgactaa cactcatgtt aaagaaagga
     2221 tgatgttcaa atgagacacc atattcaatt gtcggaagaa gaagaaaacc agttttttca
     2281 gataccttct ttgcaatgta agagattatg tcagaatctg tggagacagg caagtgtgga
     2341 ccgtgttgct ctatagaacc tacgggtatt acggcaatag gttttttcct tatttccttg
     2401 aaaattaaag gatttgagag atctcttatt atcatttaga tcgttttggt ttgacatgga
     2461 ctttccccca ataaacctcc aaccttcctt ctaaatgcat ttttactgct tcaagaagag
     2521 tttttgcctc tagtttttgt ccttttcttt tgagagattc aagagtctct ttttcatcaa
     2581 ttgcaaaagc atcttgaaaa attattggtc cttggtccaa atcttcagtt acataatgtg
     2641 atgtacaccc aacaatttta gcaccacgtt cataggcctg aacatatgcg taagctccgg
     2701 gaaaagctgg taaaatggat ggatggatgt taattattct attagggtat ctccaaacaa
     2761 aatttggaga aagcactctc atgtatcttg caagaactat taaatctaca ttgtattttt
     2821 tcataattgt aattatttta tcttctgcct ttgtctgatc gttttcacta attaatacaa
     2881 atggaattct tgcttttttt gccatttttg ttaatgtgtt ttctgttcct acaattaccg
     2941 caatttcacc ttttagctga tttttgtgtc tagcttctaa catggcttgc agacaatgcg
     3001 gttctttagt aacaagtatt gctgctctct ttctttttgt agcttcataa tgtatgttaa
     3061 cttccatctt gagattattt gctaatcttt ttgctgttgc attgaatttc tgaacatcaa
     3121 atttttttgt aaaagacgct tcgagata
//
LOCUS       DASPUS010000083         7179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1545254, whole genome shotgun sequence.
ACCESSION   DASPUS010000083 DASPUS010000000
VERSION     DASPUS010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 7179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7179)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7179
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1545254"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1118)
                     /locus_tag="VEJ68_01810"
     CDS             complement(<1..1118)
                     /locus_tag="VEJ68_01810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HXX05535.1"
                     /translation="MRVEELEISKTAIEFLQDNGFVTLYPPQEMSIKSGLLDGKNILI
                     SAPTASGKTLIAILAIIKQLLDKKGKIVYLSPLKALASEKFSEFKKLERIDFGKKIKI
                     QISTGDYDQNDKNLGLNDIIILTNEKMDSVIRQGADWLNEISLVVVDEVHLLGDDDRG
                     PTLEIILTKIMLLPQKPQILALSATVTNADEISNWLDCKLVESNWRPVPLWEGVYDQG
                     VVTMQDRKNFEIETSIRGAPVDLGLDSLKNGGQAILFAETRARSVSLATKASDAVSKD
                     LNEKDKKILANISTKILEDNEHTELIKNLATLVKKGVAFHHAGLNQNCRNVVESEFRS
                     GRIKLLASTPTLAAGVNLPARRVVIANISRYDGKFGTN"
     gene            complement(1115..3196)
                     /locus_tag="VEJ68_01815"
     CDS             complement(1115..3196)
                     /locus_tag="VEJ68_01815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minichromosome maintenance protein MCM"
                     /protein_id="HXX05536.1"
                     /translation="MTTRSESISSNKLQDQVKEFLSQFKDKSGSYKYVDEIDQMMAKK
                     IQYIVVDYNDLVSFPEIESVFNSDPDDILRAFGGAIKDILKERFPQYAEKIRLDIRVR
                     IANYPVQRSLREINAEVIGKMLSVSGMVVRASEIKPLAKELVYHCPEGHSTKRIQEKG
                     LEFKEPLKCDDAKCTHRDLELNPDQSKFIDFQMVRLQELPEDLPPGQLPHYLDVTVLQ
                     DLVDNARPGDRVILTGIVRIEQEHIPSMKGKSGIYRLRIQGNNIEFLGGRGTKTSRST
                     EREEISQDEEKIIKSLGKNADIYERLVSSFAPHVHGHDIIKESILLLIVGSTQKLLAD
                     GAKIRGDINIFLVGDPGTAKSEMLKFCSRIAPRGLYTSGRGSTAAGLTAAVVRDKIGI
                     MMLEAGAVVLGDQGLVCIDEFDKMKPEDRSALHEVMEQQSVSIAKGGIVATLNARTSI
                     LAAANPMFGKYDPFKNITENVNLPVPLLTRFDLIFVVRDIPSKERDTRIAQHILNLHK
                     TSGIDAKSLIDVDILTKYLSFAKRFDPNLTAEAEEKILDYYMKMRNVESEGMITVTPR
                     QLEGLVRLATARARLLMKTQVDGEDAERAIFLMQSMLEDAGVDVNTGKVDLGVLQGRP
                     HSEVSKMQLFMDVMKSLEGDEKRPVEEKTFVKELVKTSKFTEEEARKYIKKLQRESAI
                     YESKPGHYNRV"
     gene            complement(3193..3705)
                     /locus_tag="VEJ68_01820"
     CDS             complement(3193..3705)
                     /locus_tag="VEJ68_01820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05537.1"
                     /translation="MNISEIIRIHAIGYSLQDVKVHFNHDLKMNTEAVIEAKRGEILS
                     IPRWIANVLGAEKLVDIQDTDMVVALKQAVVRENVQGDFDLSTLESDFYIKANSYIQR
                     LPQEDRDKVESMLNSLVRKRQGKIIRLADSSKMTSELAKKLTIEEQTLFDYIHINSSQ
                     FKKQILGENK"
     gene            4003..4956
                     /locus_tag="VEJ68_01825"
     CDS             4003..4956
                     /locus_tag="VEJ68_01825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication factor C small subunit"
                     /protein_id="HXX05538.1"
                     /translation="MTESTMWVEKYRPAKLTAVVNQKEIIGSLKSLLKNTLEMPHLLF
                     SGSAGVGKTTTALCLAREILSDGWREYTLELNASDERGINMVRERVKKFARFSGLDTT
                     IPFKLVILDEADEMTSDAQTALRRIIEDTSTHCRFIIIANNISKIIEPLQSRCAVFKF
                     TRISQEDVINHLEEICKKEKIKYNKNGLNAIYENSEGDMRHSINTLQAAASLGSINEE
                     NVKTSAGLAKTNDVGIILKLALDGNLSDARNKMIELIKVYGMSESDFLKYLNEECYKL
                     KTNHLSEIVGSLAKYDYRLIIGANPEIQLSALLAELGKIGK"
     gene            complement(4960..5043)
                     /locus_tag="VEJ68_01830"
     tRNA            complement(4960..5043)
                     /locus_tag="VEJ68_01830"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5007..5009),aa:Ser,seq:tga)
     gene            complement(5161..5688)
                     /locus_tag="VEJ68_01835"
     CDS             complement(5161..5688)
                     /locus_tag="VEJ68_01835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HXX05539.1"
                     /translation="MPIPEDFPKGYKPIGKISNGEHFHFRWGPGRLAEASKDENCITS
                     FKARGEKIEPVGVSGTMVAVDWDACVADGACIEACPVQVFQWYRTEKDVPAKKAVDIE
                     MAGTGSSVKEERKDYTDKADPIREHDCIWCMACVSVCPPQAIKVDQSNLEHHEKAAGT
                     FTKMETGSVNPHAHH"
     gene            complement(5740..6186)
                     /locus_tag="VEJ68_01840"
     CDS             complement(5740..6186)
                     /locus_tag="VEJ68_01840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013482964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HXX05540.1"
                     /translation="MPIDPNFPKNHKVMEKFKDPLSDNYHLVWGPGRLAEAAVDKKVV
                     DDYKALGEAIKPLGVHGTYVAVDWDSCIADGICLLSCPVKVFEWYKNPGETGRNDKKD
                     YTDKANPVKEPHCIWCMACVEVCPTKAIKVDQSNQEIHEKEIANIP"
     gene            6264..6935
                     /locus_tag="VEJ68_01845"
     CDS             6264..6935
                     /locus_tag="VEJ68_01845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-6"
                     /protein_id="HXX05541.1"
                     /translation="MGIFKYDVYRSPNVGIYAKCNDSFVFIPNGFATTKAENLKEFLK
                     TEYVFTSVANTRLLGVLMIANNNGILLPRNSLEEEVIHLKKSTGLNVDILDTNHTALG
                     NLICVNDKGGIMSPLISNEYVKKVEDVLGIEVVRKKIAGYHQAGAMAVANSHGGIIHP
                     SAEEEDIKTISQVLGVELEPATINGGTPYVASGILANNKSLVVGSLTNGPELVMLTKA
                     FRVED"
     gene            complement(6919..>7179)
                     /locus_tag="VEJ68_01850"
     CDS             complement(6919..>7179)
                     /locus_tag="VEJ68_01850"
                     /inference="COORDINATES: protein motif:HMM:NF015113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HXX05542.1"
                     /translation="VNNDMKKIATNIAASLRLKGIATEIDLLGKPLKKQMEVASHSKY
                     VIIVAPKEHATNSVVVRNMRDGSEKQVKLESILNDPKTNLQP"
BASE COUNT         2107 a         1372 c         1234 g         2466 t
ORIGIN      
        1 ttgttagttc caaatttacc atcatacctg cttatattag caatgactac acgccttgcg
       61 ggaagattta ctcctgctgc aagtgttggt gtagaagcca gtagttttat tcttccactt
      121 cgaaattcag attctacaac attcctacaa ttttggttaa gaccagcatg atgaaatgca
      181 acacctttct ttactaatgt tgcaagattt ttaatcagtt cagtgtgttc gttatcttca
      241 agaatttttg ttgaaatatt tgctagtatt tttttatctt tttcattaag atcttttgag
      301 acagcatccg aagcttttgt tgctagagaa accgatcgtg ctctagtttc agcaaacaga
      361 atggcctgtc caccattttt tagtgagtca agtcccaaat caactggtgc cccacgaata
      421 cttgtttcga tctcaaaatt tttcctgtct tgcatagtta caactccttg atcataaact
      481 ccttcccaga gaggaacagg tctccagtta ctttccacga gtttacaatc taaccaattc
      541 gatatttcat ctgcattagt gactgtagca ctgagagcaa gaatctgtgg tttttgtgga
      601 agtaacatta tttttgtaag tataatctca agtgttggcc ctcggtcatc atcacccaat
      661 aagtgaacct catccacaac aacaaggcta atctcattta gccaatctgc accttgccta
      721 ataacagaat ccatcttttc attggtaaga attatgatat catttaatcc cagattcttg
      781 tcgttttgat cgtaatctcc agttgatatc tgaattttta tttttttacc aaaatctatt
      841 ctctctagtt ttttgaattc agagaatttt tcagatgcta aggctttcaa tgggctaaga
      901 tacactatct ttcccttttt gtccaaaagt tgctttatga tggcaaggat tgcgattaat
      961 gttttcccgc ttgctgtagg ggcagagatt agaatatttt taccatccaa taatccagat
     1021 tttatactca tttcttgtgg cggataaaga gtaacaaaac cattatcctg aagaaattcg
     1081 atagctgttt tagaaatttc tagttcttct actctcatac ccggttatag tgaccaggtt
     1141 ttgattcata aatagctgac tctcgttgca actttttgat atattttcta gcttcctctt
     1201 ctgtgaattt acttgttttg accaattctt tgacaaaggt cttctcctca acaggtcttt
     1261 tttcatctcc ttctaatgat ttcattacgt ccatgaataa ttgcatcttt gaaacctcgc
     1321 tatgaggtcg tccttggaga acaccaagat ctacttttcc agtattgacg tcaaccccag
     1381 cgtcttctag catactctgc attagaaata ttgctctctc tgcatcttca ccatcaactt
     1441 gagttttcat caaaagtctt gctctagcag ttgccaatct tactagtccc tctaactgtc
     1501 ttggagttac ggtaatcatt ccttcagatt ccacatttct cattttcatg taatagtcta
     1561 gaattttttc ttctgcctct gcagtaaggt ttggatcaaa tctctttgcg aatgaaagat
     1621 attttgtaag aatgtccaca tcaattagtg atttggcatc aattccagaa gttttatgta
     1681 aattcaaaat gtgttgagct atccttgtat ctctttcttt agatggtata tctcttacaa
     1741 caaagataag atcaaaacgt gttagaagtg gaactggcag attaacattt tctgtaatat
     1801 ttttaaaagg atcgtatttt ccaaacattg ggtttgcagc agctaaaatt gatgtcctag
     1861 cattcaacgt agctacaatt cctccttttg caatacttac cgattgttgc tccattactt
     1921 cgtgtaatgc gcttctatct tctggtttca ttttgtcaaa ctcatctatg cagactagtc
     1981 cctgatctcc aagtaccacg gcacctgctt caagcatcat tataccaatc ttatccctta
     2041 caaccgctgc tgtcaatcct gccgctgtag agcctcgtcc agatgtataa agtcctcttg
     2101 gcgctattct tgaacagaac ttgagcatct cactttttgc tgtaccagga tcaccaacaa
     2161 ggaaaatgtt aatgtctcca cgaatttttg caccatctgc aagaagtttt tgagtcgaac
     2221 ctacaataag caatagaatg gattccttaa tgatatcatg accatggacg tgaggtgcaa
     2281 acgaagatac taatctttca tatatgtcag catttttgcc aagtgatttg attatttttt
     2341 cttcatcttg ggagatttct tctctttctg tacttcggga tgttttagtt ccacgtcctc
     2401 ctaaaaattc tatattattt ccctgaattc ttaatctgta aatcccactt tttcctttca
     2461 tggatggaat atgctcttgt tctattctta caattccagt tagtataaca cgatcacctg
     2521 gccttgcgtt gtccaccaaa tcttgtagta ctgtaacatc tagataatga ggcaattgac
     2581 caggaggtag atcttcagga agttcttgca atcgaaccat ttgaaaatca atgaatttac
     2641 tttgatctgg atttaattca aggtctctat gagtacattt tgcatcatcg catttgagcg
     2701 gttctttgaa ctctaagcct ttctcttgaa ttcttttagt tgaatggcct tcaggacaat
     2761 gatacacaag ttcttttgca agtggtttta tttctgaggc tcgtactacc ataccggaaa
     2821 cacttaacat ttttccaatt acttccgcat taatttctcg taaactacgt tgaacaggat
     2881 aatttgcaat tcttactcta atatctagtc gaattttttc tgcatattgt ggaaatcttt
     2941 cttttagtat gtctttaatt gctccaccaa aggctcgtag aatatcatct ggatcagaat
     3001 taaaaacaga ttcaatttct ggaaatgaaa ctagatcatt ataatcaact actatgtact
     3061 gaattttttt tgccatcatt tgatctattt catcaacgta cttgtaagaa ccagatttgt
     3121 ctttgaattg actaagaaat tcctttactt gatcttgaag cttatttgag gagatggatt
     3181 cagagcgtgt agtcatttat tttcaccgag aatttgtttt ttaaattgac tgctgtttat
     3241 gtgaatataa tcaaataatg tttgttcttc aatggttaat ttttttgcta gctctgaagt
     3301 cattttagac gagtctgcaa gtctaattat ttttccctgt ctttttcgga ctagagagtt
     3361 taacatgctt tctactttgt cacgatcttc ttgtgggagt ctttgaatgt atgaattagc
     3421 ttttatgtaa aaatctgatt ctagagtgga aagatcaaaa tctccctgta cgttctctcg
     3481 tactactgct tgttttaatg caacaaccat atctgtatct tgaatatcta caagtttttc
     3541 tgcacccaaa acattagcaa tccaacgagg aatactgaga atttctcctc tttttgcttc
     3601 aattacagct tctgtattca tcttaagatc gtgattaaag tggactttaa catcctgcaa
     3661 gctgtatcct atggcatgta tgcgtattat ctcagagata ttcattttac gttgatcctc
     3721 cctcatgcca taattgtaat ggatcgatca attttgttaa ccaactgctg agatcatttg
     3781 atcttgattt caatgtctca ttgaatatat tgtaatatat cactcaatca ccttcatagc
     3841 gatcaattca atgagaataa taatcatcta aatcacacaa attctgatta cagaagttaa
     3901 gaacgattgg ttatagatca attaccaaca tctatcatag aacaacatag tcatctatcc
     3961 tttagactta attttattag taggtcaggg aggtaggagc gtatgactga atctaccatg
     4021 tgggtagaaa aataccgccc agcaaaatta acagcagtag ttaatcagaa ggagataata
     4081 ggaagtctaa agtctctttt aaaaaatact ttagaaatgc cacatttgct tttttcgggt
     4141 tctgctggag taggtaagac aacaacagca ttatgtcttg caagagagat tctaagtgat
     4201 ggatggagag aatatacact tgaattaaac gcatctgatg aaaggggaat aaatatggta
     4261 agagaaaggg taaaaaaatt tgctcggttt tctggtttag ataccacgat tccattcaag
     4321 cttgttattt tagatgaagc tgatgaaatg acatctgatg ctcaaacagc tcttaggcga
     4381 atcatcgaag acacttcaac acattgtaga ttcataataa ttgcaaataa tatatcaaaa
     4441 attatcgagc cacttcaaag cagatgtgcg gtattcaagt ttacgagaat ctcccaagaa
     4501 gatgttataa atcacttgga agaaatatgc aagaaggaga aaatcaaata caataagaat
     4561 ggcctaaatg cgatttatga gaattcagaa ggtgatatgc gtcactccat caatacgctt
     4621 caagcagcag caagtctggg atcaattaat gaagagaatg taaaaacatc agcaggactt
     4681 gcaaaaacaa atgatgttgg aataatcttg aaacttgccc ttgatggtaa tttgtctgat
     4741 gcacgaaaca agatgataga attaatcaag gtttatggaa tgtcagaatc ggatttccta
     4801 aaatatctta atgaggaatg ctacaaacta aaaaccaatc atctctcaga aattgtcggt
     4861 tcattagcaa agtatgatta tcgtctcata ataggtgcca atccagagat tcagctctct
     4921 gcattacttg cagaacttgg aaagatagga aaataaaaac gcagagagag ggatttgaac
     4981 ccccgcgtgc ttgcgcacat aggctctcaa ggcccacgcc atgccgggct aggcgacctc
     5041 tgcaaatctt ttttgcaaga cgttgttaaa atttgtttaa tattctgaga ttatcatata
     5101 agaaagaata tcgataatac tcattagaaa acatagaaaa ataaaaagga cgaataagtt
     5161 ttagtggtgt gcgtgtggat taacagaacc ggtttccatt tttgtgaatg ttccagctgc
     5221 cttttcatgg tgttcgagat tagactgatc taccttgatt gcttgtggag gacaaactga
     5281 aacgcatgcc atacaccata tacaatcatg ttctcgtatt ggatcagcct tgtctgtgta
     5341 gtcttttctt tcctctttta ctgaactacc ggttccagcc atttcaatat ctactgcttt
     5401 ttttgctggg acatctttct ctgttctata ccactggaag acttgtactg gacaagcttc
     5461 gatgcatgca ccgtcagcaa cacatgcatc ccaatcaact gctaccatgg taccactgac
     5521 acctactggt tctatttttt cacctctggc cttgaatgaa gttatgcagt tctcatcttt
     5581 tgaagcctct gcgagtctac caggccccca tctgaagtga aaatgttcac catttgatat
     5641 ttttccaatt ggtttgtatc cttttgggaa atcttctggt atcggcatgg ttttttgtca
     5701 caggatatgt tatttaaacc tagacaatgt tagtttaaac taaggtatat ttgcgatctc
     5761 tttttcgtga atttcttgat tagactgatc taccttgatt gcttttgtag gacacacttc
     5821 tacacaggcc atacaccaaa tgcaatgggg ttcttttacg gggtttgctt tatcggtata
     5881 atctttttta tcatttctac ccgtctcacc tggatttttg taccactcaa atactttcac
     5941 tgggcaactt aatagacaga taccatcagc tatacatgaa tcccaatcaa ctgcaacata
     6001 ggttccatgt acccctagcg gtttgattgc ctcaccaagt gccttgtaat catcaactac
     6061 tttcttatct accgctgctt ctgccagacg tccaggaccc caaactaaat ggtaattatc
     6121 gcttaatgga tctttgaatt tttccatcac tttatggttc ttaggaaagt ttggatcgat
     6181 tggcacaata ctgcagaaat attgttactt atttaaagtg tgtacaagat aaattcatat
     6241 ctttcaaaaa tgcgctgtaa tcattgggaa ttttcaagta tgacgtatat cgtagtccta
     6301 acgtaggtat ttacgcaaag tgtaacgata gttttgtttt tattcctaat ggttttgcaa
     6361 caaccaaagc tgagaatctt aaagaatttt tgaaaacaga atatgtcttt acttcagtag
     6421 caaatactag attgcttgga gttcttatga ttgcaaacaa taatggcata cttttaccac
     6481 gcaattcgtt agaagaagaa gtaattcatc ttaagaaatc aactggtctt aatgtggata
     6541 tacttgatac aaatcatacg gcacttggca atctcatctg tgtaaatgat aaaggtggaa
     6601 taatgtctcc tcttatttct aatgaatatg tgaaaaaagt tgaagatgta ttaggtatag
     6661 aggtagtaag aaaaaaaatt gcaggatatc atcaagctgg tgccatggca gtagcaaatt
     6721 ctcacggtgg aataatacat ccttctgcag aagaagaaga tatcaaaact atatctcaag
     6781 tactcggcgt agaacttgaa ccggctacca tcaatggagg aacaccttat gtggcttcag
     6841 gaatacttgc aaataacaaa tctttggtag taggtagtct tactaatgga cctgagctgg
     6901 taatgcttac aaaagcattc agggttgaag attagtttta ggatcgttta gaatagattc
     6961 tagtttaact tgtttttccg aaccatctct catgttacga actacaacag aattagtagc
     7021 atgttctttt ggggctacaa ttattacata tttggaatgt gatgcgactt ccatctgttt
     7081 ttttagcggt ttccctaaaa gatcaatttc agttgcaata ccctttaaac gaagtgaggc
     7141 agcaatattt gttgcaattt ttttcatgtc attattgac
//
LOCUS       DASPUS010000084         2277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1957473, whole genome shotgun sequence.
ACCESSION   DASPUS010000084 DASPUS010000000
VERSION     DASPUS010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1957473"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..341)
                     /locus_tag="VEJ68_01855"
     CDS             complement(<1..341)
                     /locus_tag="VEJ68_01855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05543.1"
                     /translation="MRIPLSVFRMGIVLVLIGSVWTGIVFSSTIKESKSIILDRLDSA
                     RISIDLNGNGLGFYIISANGYDNILLAKILDSQGNYIDMKRITNKLTVNYFQFEKTGE
                     YTLEITNFVDKP"
     gene            complement(382..456)
                     /locus_tag="VEJ68_01860"
     tRNA            complement(382..456)
                     /locus_tag="VEJ68_01860"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(419..421),aa:Arg,seq:tcg)
     gene            500..1672
                     /locus_tag="VEJ68_01865"
     CDS             500..1672
                     /locus_tag="VEJ68_01865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HXX05544.1"
                     /translation="MKISQRVAGVEYAIRDIALEARKLQKQGRKITYLNIGDPLQYGF
                     QPPQNVKDALIKAVKEDQNYYAASEGLQELREAIAKKENNKGLRVQEDDILVTNGVSE
                     GLEMIMASIVEPGDEVLIPGPYYPPYASYVRLFGGKPVEFSVDLQNSTPDLDDIKRKI
                     SSKTVAICLISPNNPTGAVFNEKSLKDLIDVANEHDLYIVCDEIYDQIIFDEKFVGIG
                     KVSSDSPVILLNGFSKVHLMSGLRIGYIAFNQSKKLELLRENVPKLARVRIATNLPVQ
                     YAALESLRGPQDYIPKFVSELKKRRDYTIKRLNGMHGISCSNPKGAFYAFPKIENNKY
                     KSDKEFVLDLLKETGVLTVHGSGFGTQYGSGHFRMVFLPEIPILEQALDKIEQFMA"
     gene            complement(1669..2064)
                     /locus_tag="VEJ68_01870"
     CDS             complement(1669..2064)
                     /locus_tag="VEJ68_01870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HXX05545.1"
                     /translation="MNKEFIKSQKILRLATIDPKGNPHIVPVWYDYINGKFYIGTNSR
                     TTKAKNVKKNPRVSFCIDVGIKSPDIFGIMGVGRAMLILENRRVQLVAKKILLRYFKS
                     IKNKSAQQLLNDTDCIIKITPTKLASWKY"
     gene            complement(2057..>2277)
                     /locus_tag="VEJ68_01875"
     CDS             complement(2057..>2277)
                     /locus_tag="VEJ68_01875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05546.1"
                     /translation="VTQRKNWFTAMGILFIVVAAIAVLRDLAIWGPDFMVDFLTSQEI
                     TSEKISVGMFGIGGFLIILGLRGTTYDE"
BASE COUNT          762 a          428 c          389 g          698 t
ORIGIN      
        1 ggcttgtcaa caaaattggt tatctcaaga gtatattctc ctgttttctc aaattgaaag
       61 taattcaccg taagtttgtt tgttattctc ttcatatcga tatagtttcc ttgcgaatct
      121 agaatcttgg caagaagaat attgtcatat ccgtttgcag aaataatgta aaaaccaagg
      181 ccatttccat tgagatctat tgatattctt gctgaatcaa gcctgtctaa aattatactt
      241 ttagattctt ttatggtact agaaaataca atccctgtcc ataccgaacc tatgaggaca
      301 agtacaattc ccatcctaaa tacggaaagg ggtattctca tatccataac ataaatcata
      361 ttcattatct aactattact aagggcccgg tgggattcga acccacgacc tggtggtccg
      421 aagccacccg cactatccgg gctgtgcaac gggtccaatc aagtaagaat ttaacggggc
      481 taaatatctg tctagttaat tgaagatatc acaaagagtc gccggagtag aatatgccat
      541 acgggatatt gcacttgagg cacgcaaact gcagaagcaa ggaagaaaga taacctatct
      601 taacatcgga gatccattac aatatggttt tcaacctcca caaaacgtca aagacgcact
      661 gattaaagca gtaaaagaag atcaaaatta ttatgctgca tctgaaggat tacaagaact
      721 tagagaggca atcgcaaaaa aagagaacaa caaaggccta agagttcaag aagatgacat
      781 tctagtaaca aacggtgttt cagaaggact tgaaatgatt atggcgtcaa tagtggaacc
      841 aggtgatgaa gttctaatcc caggtccata ctatccacca tatgcatctt acgtcagatt
      901 atttggagga aaaccagtag aattttctgt tgatttacaa aattctactc cagatcttga
      961 tgatattaaa agaaagattt cttccaaaac tgttgctatc tgtctaataa gtcccaacaa
     1021 tcctaccgga gctgtcttta atgaaaaatc attaaaggac ttgattgatg ttgcaaatga
     1081 acatgacctc tacatagttt gcgatgaaat ttatgatcaa ataatttttg acgaaaaatt
     1141 tgtaggaata ggcaaggtta gctctgactc tccagttata cttctaaatg gattctccaa
     1201 agttcatctc atgtcgggat tgcgaattgg ctatattgca tttaaccaat caaagaaact
     1261 ggaattactt cgtgaaaatg ttccaaagct tgctagagtc agaattgcaa caaatttacc
     1321 tgttcaatat gctgccttag aatctcttag gggtcctcaa gactacattc ctaaattcgt
     1381 ctcagaacta aaaaagagac gagattatac cataaaacga ctaaacggga tgcatggtat
     1441 tagttgttcc aatccaaaag gagcattcta tgcatttcca aagattgaga ataataaata
     1501 caaatctgat aaagaatttg tattagatct tctgaaagaa acaggcgttc ttacagtaca
     1561 tggttctggt tttggaactc aatatggtag tggccatttt aggatggtct tcttaccaga
     1621 gataccaatt ttagaacaag cacttgacaa aatagaacaa ttcatggctt aatacttcca
     1681 acttgcaagt tttgtaggcg ttatcttgat gatacaatca gtatcattca aaagctgttg
     1741 tgctgattta ttttttatac ttttaaaata tctaagaaga atctttttgg caactagctg
     1801 aacacgtctg ttctctaaaa ttagcattgc tctcccaacc cccattattc caaaaatatc
     1861 tggagattta attccaacgt caatacaaaa tgatactctt ggattttttt taacattttt
     1921 tgcttttgta gttcttgaat ttgtgccaat gtaaaatttt ccgtttatgt aatcatacca
     1981 gacagggaca atatggggat ttcccttagg atctattgtt gcaagcctta aaatcttttg
     2041 agattttatg aattccttat tcatcatatg ttgttcccct aaggccaaga atgatcaaga
     2101 atccgccaat accaaacata cctaccgata tcttttcact tgtaatttct tgtgaggtta
     2161 aaaaatcaac cataaaatca ggtccccaga ttgccaaatc tcgaagaacc gcaatagctg
     2221 ccactacaat gaataaaatg cccattgcag taaaccaatt ttttctttga gttacca
//
LOCUS       DASPUS010000085         2061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1957651, whole genome shotgun sequence.
ACCESSION   DASPUS010000085 DASPUS010000000
VERSION     DASPUS010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1957651"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..762
                     /locus_tag="VEJ68_01880"
     CDS             <1..762
                     /locus_tag="VEJ68_01880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HXX05547.1"
                     /translation="VVGDAGRYGKLENNPTGEPDDTGVILQLVPPGPYYAMGIRNSFG
                     LTVDPVTGKLWDTENGPWYGDEINIVPPKFNSGWDAIMGPANKTQLANLPKYKDYVYH
                     DPQFTWEKTVAPTAISFVNSDKFEKYKNSVFVGDCNNGNLYKFELNQNRDGFVFQSPQ
                     LQDNVANIGDSQDEIIFGSGFGCITDIKIGPDGLMYIVSLPFGTIYRIVPKEMITEGE
                     PLGIEQQYIIISALTIGAVSTAVYFKKFRKKTIQA"
     gene            complement(799..1059)
                     /locus_tag="VEJ68_01885"
     CDS             complement(799..1059)
                     /locus_tag="VEJ68_01885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05548.1"
                     /translation="MRTIGHFIRYDDVLETVMNIYDKKSVRCSRCDKFIGEIDYDAIV
                     TLPKCGRCANPLPEGDDKIMYVVSKFNKNPQILTKPLDPTLA"
     gene            1518..2042
                     /locus_tag="VEJ68_01890"
     CDS             1518..2042
                     /locus_tag="VEJ68_01890"
                     /inference="COORDINATES: protein motif:HMM:NF025865.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HXX05549.1"
                     /translation="MNEKSFFDLVKKRRSIRTFKTEKANESKLNKILLACNMAPSAGG
                     LQSFEIYQVKNKEIKKKLVSAARDQVFISEAPLLLVFCANQKRSIEQYGERSILFSVQ
                     DATIAAVYAQLATQALGLSSVWIGAFDENKVSEILHLPEGQRPISMLPIGYPNEKPKA
                     KSTREISDILHVID"
BASE COUNT          720 a          358 c          378 g          605 t
ORIGIN      
        1 gtggtcggag acgcaggtag atatggaaaa cttgaaaaca atcccactgg agaacctgat
       61 gatactggtg tgattcttca acttgttccg cctgggccat actatgccat ggggataaga
      121 aacagctttg gactaacagt agatccggta actggcaagc tatgggatac tgaaaatggg
      181 ccatggtatg gcgatgaaat caacattgta cccccaaaat ttaacagtgg ctgggatgcc
      241 ataatgggtc ctgcaaacaa gacacaactt gcaaaccttc caaagtataa agactatgtg
      301 tatcatgatc ctcaattcac ctgggaaaaa actgtggctc ccactgcaat atcgtttgta
      361 aattctgaca aatttgaaaa atacaaaaac agtgtgtttg ttggagattg taataacggt
      421 aacttgtaca aatttgaatt aaatcagaac cgagatggtt ttgttttcca atctccacaa
      481 ctccaagata atgttgcaaa cattggtgat tcccaagacg aaataatatt tggtagcgga
      541 ttcggttgta taacagatat aaaaattggg cccgacggct tgatgtacat tgtatctctg
      601 ccttttggga ccatatacag gatagttcca aaagaaatga taacagaagg agaaccatta
      661 ggaattgaac aacaatacat cataatttca gcattgacta ttggggctgt atctacagct
      721 gtttatttta agaaattcag gaaaaaaaca attcaagcat agcctactcc taaattattt
      781 taccgttagg taatagagtc aggccaaagt tggatccagc ggttttgtta aaatttgtgg
      841 gttcttgttg aatttgctaa caacatacat gattttgtcg tcgccttctg gcaagggatt
      901 agcacatcta ccacattttg gcaaagtaac tattgcatca taatcaatct cacctatgaa
      961 tttgtcacac ctagaacaac ggactgattt tttatcataa atgttcatta ctgtttctaa
     1021 tacgtcatcg tatctaataa agtgtccaat ggttctcaaa tgttgataat attactagat
     1081 agaaagagaa tactgttctc atccatcttg atcagtaaca attaggatgg aatcttcgtt
     1141 taattgtgga gaattaaaat atgagaggat aaatcaattc tcacaactaa ataatccaaa
     1201 accacagctc tgagtacaac agatgtcttt gaaaaataca tacatgtatt tttgttaaat
     1261 gaagatcaat aacataaaat gagttgttat ccaataagac tgaaaatgcg tataacagaa
     1321 gaagaaaaca aggaactagc ttctgaaaaa attatattag aataattaag cttatttctg
     1381 agagtccttc agtactttca aaacgtattc atcttttgaa atcattttgt atttgtttga
     1441 acatattcta cacccattat caattttgat attcgactca aatactataa tagaaaaaga
     1501 tcaagcaaga tgacatcatg aatgaaaaat cgttctttga tcttgttaaa aaaagacgct
     1561 cgattaggac atttaagaca gaaaaagcaa atgaatcaaa attaaacaaa attcttcttg
     1621 cttgcaacat ggctccttca gcgggaggtt tacagtcatt tgagatttac caagttaaaa
     1681 ataaagaaat aaaaaagaag ctggtgagtg cagcccgaga tcaagtcttt atctccgaag
     1741 ccccactttt actagtcttt tgtgcaaacc aaaaacgttc tattgaacaa tacggtgaaa
     1801 gatcaattct attttctgtt caagatgcta ctatagctgc tgtctatgcc caacttgcaa
     1861 cgcaggcact tggattatca tccgtgtgga ttggggcatt tgatgaaaac aaagtctctg
     1921 aaattctgca tttgccagaa ggacaaagac cgatttccat gttgccaatt ggttatccaa
     1981 atgaaaaacc aaaagcgaaa tcgacacggg aaatcagtga tatcctgcat gtaattgact
     2041 gagttttgaa aagagatagt a
//
LOCUS       DASPUS010000086         2633 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1688594, whole genome shotgun sequence.
ACCESSION   DASPUS010000086 DASPUS010000000
VERSION     DASPUS010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2633)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2633)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1688594"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..695
                     /locus_tag="VEJ68_01895"
     CDS             <1..695
                     /locus_tag="VEJ68_01895"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF012630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031012 - extracellular matrix [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HXX05550.1"
                     /translation="LTLYMGDHLVIQHNDKLLDTGGFLIEPLSENIVGVNLPWNLQKS
                     GVMTVDIENSDVATQHQIAIIRDAILSSAITDKDGNIIHTSSQYGVYYKGWTGALAQT
                     HDDQVKTFMPTKFNVMTSNTDQGDIVIKLINEKNDEGYMGYTKLTTDNDHITKATIMV
                     FEIGTISDKDLSTVIRHEFGHALGLGHSTDSGDLMHDTIDTKYGYISSCDIHALSKLY
                     EGQESSVVICDA"
     gene            780..>2633
                     /locus_tag="VEJ68_01900"
     CDS             780..>2633
                     /locus_tag="VEJ68_01900"
                     /inference="COORDINATES: protein motif:HMM:NF024573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HXX05551.1"
                     /translation="MVFIRKLEIFGFKSFGYKNTIINLEPGLVAISGANGSGKSNILD
                     AISFALGENTPKVMRVDKLRSLLHDVDNAHHGAKIARVSCHLDNSDRKIPIDSNTVTV
                     TREMDEAGENIYYLNQKKILRSQVLDLLEIANCGIHKLNIVQQGTITRISEFNAEERR
                     RIIEDIIGLAYFDEKKTEALKQLDEADRRLEIALARMDEIKKRIDELEVERNSQLRYD
                     CLDRELKRLYAIQASNKLRDIETQKISKERNLNAIQSESKKFEEQRSTLRDEIKKLED
                     EKQKFMEEVNAYNIAKASIDSELSAAMHQSEAANSKMATNARRLSQIESRLPEIHAEL
                     TLYHDKRLTLETQIAELKNSISVINESRKNTNAELATVDSEINQILRQQSQIISGKLK
                     IDEKVRNLASTLNDAQLSKSKLEQERTDLQNKIEQNSLKIKSLSDEKEKLLDLEQKLK
                     QVRSGHEANINELKSRVSDLRDKRTKIEKDVEDTSIIFEKANKAAAQYEAKIKVVKEV
                     MHEDYSIAKLKEDSKRLGIRGLVYELLSWDKQYERAILASSSDWLKALVVNDFATLLG
                     ISEFAQQKKLPKIRIIPLDAVSNSKTSVPQEDGVLGMLSDFVRCDESLISLK"
BASE COUNT          976 a          458 c          521 g          678 t
ORIGIN      
        1 tgctgacttt gtatatggga gatcatcttg tgatacaaca taatgataaa ctgctagata
       61 ctggcgggtt tctaattgaa cctctaagtg agaacattgt aggagttaat ttgccttgga
      121 atttgcaaaa aagtggcgta atgacagtag atattgaaaa ctctgatgtt gcaacccagc
      181 accaaatagc cataattcga gatgctatac tttctagtgc gattactgat aaagatggaa
      241 atatcattca tacaagttcg cagtacggtg tatactacaa aggatggaca ggtgcattgg
      301 ctcaaacaca tgatgaccaa gtaaaaacat tcatgccgac aaaatttaac gtgatgacat
      361 ctaacaccga tcaaggcgac atagtgataa aactaatcaa cgaaaaaaat gatgaaggat
      421 acatgggcta taccaaattg acaacagata acgatcacat aacaaaggca accattatgg
      481 tctttgaaat tggtactata tcagacaaag atctctccac tgttattagg cacgagttcg
      541 ggcatgcgct aggacttggg cattctactg atagtggaga cctaatgcat gatacaattg
      601 acacaaaata tggctatatc tcaagctgtg atattcatgc actatccaaa ttgtatgagg
      661 gccaggaatc aagcgtagta atttgcgatg cctagctttt cagcgtgtta attgttgtta
      721 gcatagtcaa gtaaacttgt caataatctg ttattttaca tgtcccacta ccaatcacat
      781 tggtctttat ccgcaagcta gagatttttg ggttcaagtc atttggatat aaaaatacga
      841 taatcaacct cgagcctggc ctagtagcaa tctcgggggc caacggatct ggcaagagta
      901 acattttaga tgcgatttct tttgccttgg gggaaaatac gcctaaagta atgagagtag
      961 acaaactccg ctccttgtta catgacgtag ataatgctca tcatggtgca aagatcgcaa
     1021 gagtaagttg tcatcttgat aattcagata ggaaaattcc aatagattct aacactgtta
     1081 ctgtaacccg cgagatggat gaggcaggcg agaatatcta ttacttgaac caaaaaaaga
     1141 tcttacgaag tcaggttctt gatcttttag agatcgcaaa ctgtggaatt cataaactga
     1201 atatcgttca gcagggaact atcactagga tatccgaatt taatgcagaa gaaagaagga
     1261 gaataataga agatattatc ggccttgcat attttgatga aaaaaagaca gaggcactaa
     1321 aacaactcga cgaggcagat cgacgccttg agattgcgct agcaagaatg gatgagataa
     1381 agaaacgtat tgatgagtta gaagttgaaa gaaacagcca gctcaggtat gattgtttag
     1441 atcgagaact aaagagacta tatgccatac aggcatcaaa caaactccgg gacattgaaa
     1501 cacaaaaaat ttcaaaagaa agaaatctta acgcaatcca atcagagtcc aaaaagtttg
     1561 aagaacagag atctacacta agagacgaga taaagaaact ggaagatgaa aaacaaaagt
     1621 tcatggaaga agtcaatgca tataatatcg caaaggcctc tatagactca gaactttctg
     1681 cagcaatgca ccaatccgaa gcagccaaca gtaagatggc tactaacgca agaagacttt
     1741 cccagattga atcccgactg ccagagatcc atgctgaatt gactttgtat catgataaac
     1801 gtttaacact tgaaacacaa attgctgagc tgaaaaattc tatatctgta ataaatgaat
     1861 caagaaagaa taccaatgcc gaacttgcaa cagttgattc agaaatcaat caaattctaa
     1921 ggcagcaatc acaaataatt agtggcaagc tcaaaatcga tgagaaagta cgtaatctcg
     1981 ctagtacatt aaatgatgca caattatcaa aatcaaaact agaacaagag cgtactgatc
     2041 ttcaaaataa aatagaacaa aactccctta aaattaaatc tctttcagat gaaaaagaaa
     2101 aactcttaga tcttgaacaa aaactaaaac aagtaaggtc tggtcatgaa gcaaatatca
     2161 atgaattaaa atctagagtt tctgatctgc gtgacaagcg cacaaaaata gaaaaagatg
     2221 ttgaggacac tagcataatt tttgaaaagg caaacaaagc cgctgctcaa tatgaagcta
     2281 aaattaaagt agtcaaagaa gtgatgcatg aggattattc aattgcaaaa ctaaaggaag
     2341 actctaagcg actaggaata cgtggtcttg tatatgagtt actttcatgg gacaaacagt
     2401 acgagagggc gatacttgct tcatcttcag attggctcaa agctttagtt gttaatgatt
     2461 tcgcgactct ccttggaata tcagaatttg cacaacagaa aaaacttcca aaaattagga
     2521 taataccatt ggatgctgta tccaattcaa aaacatcggt tccacaagag gatggtgttc
     2581 ttggaatgtt atcagatttt gttaggtgtg atgaaagtct gatatcattg aaa
//
LOCUS       DASPUS010000087         2910 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1688739, whole genome shotgun sequence.
ACCESSION   DASPUS010000087 DASPUS010000000
VERSION     DASPUS010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2910)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2910
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1688739"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..978)
                     /locus_tag="VEJ68_01905"
     CDS             complement(<1..978)
                     /locus_tag="VEJ68_01905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HXX05552.1"
                     /translation="MCSIIGYLGFSPAAPILVKGLKRMEYRGYDSVGVATFADKGISV
                     RKGVGKVLEVNKAAKLDELSGTVGIGHTRWATHGMVTDINAHPHPSSTGEVAIVHNGI
                     IENHEELKKDLEQKGYTFKSQTDSEVIANLLQYHFDKTREIKNSMIDTVMQLKGNYAF
                     VAVFEDGTLAAARFHEPLIIGIAKEGYFISSDVLGFVEHTDEVIYLDNREFVIIGKSG
                     IKIFDFDANPVQHQITKVSKEFADVYKGEYAHFTLKEISEQPTTILNAGGNTKLELDL
                     ATDFVKHAKTVYITGSGTSYNAALIAKFLFSKYAKIKIEPIISSEVQFSP"
     gene            complement(1023..1562)
                     /locus_tag="VEJ68_01910"
     CDS             complement(1023..1562)
                     /locus_tag="VEJ68_01910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HXX05553.1"
                     /translation="MGDYPKNSHKMWRRPKRPLNYDLLNEELYVLGTYGLKNKRELWK
                     AHTELSRIRNQARSLLALTQDVRNKKEPTLMKSLSRIGLVKEDSTLDDVLNLKVTDLL
                     ARRLQTVIQKKANIKSPYLARQVVVHGHVMIGERIVTIPSYTVAVGEENEVHLSPDVD
                     LGKVKQEKPVAVEAEQSSE"
     gene            complement(1573..2214)
                     /locus_tag="VEJ68_01915"
     CDS             complement(1573..2214)
                     /locus_tag="VEJ68_01915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HXX05554.1"
                     /translation="MSSQEFRHIVRIAGKDIPGTKKTIIGISQIKGMGYNFAKAILDV
                     LKINPNSNVGFLTESQVVEIEKAMRSPSSVNIPPWFLNRRKDMDSGDNLHLITSDIDF
                     NVRNDIEREKNMNSWRGFRHTYGLKVRGQRTRTTGRKGGAVGVRKGGKILPAGATPEG
                     AAAPGAAAPGAAAAPGAAAAPAEKGAAAPKAAAPAKDTKTPPPAKPAAEKKTK"
     gene            2298..>2910
                     /locus_tag="VEJ68_01920"
     CDS             2298..>2910
                     /locus_tag="VEJ68_01920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05555.1"
                     /translation="MTQDFENLVTRSYTSAPKYSEVMAGVPEDYKQIKTLGDLLEINY
                     KIVGAKEQLRRNLISKIRTNQTKYPGIIGFENDVIPAIDRAILSSHDIILVGQIGQAK
                     TRIAQTIAENLLSPMPVIRGSVTNDCPMDLPANELILLLQDKENPMSVPKFSVEAESL
                     EKIRNNKLDTSIEWVEGKDRFKYILATPDISVKDLVGQIDAIKI"
BASE COUNT          812 a          610 c          505 g          983 t
ORIGIN      
        1 tggtgagaac tgtacctcac tagatattat tggctcaatc ttaattttcg catattttga
       61 aaagaggaac ttggctatga gtgcagcgtt ataactagta ccacttcctg ttatgtaaac
      121 tgtttttgca tgtttgacaa agtcagttgc caaatcaagc tctaatttag tattgcctcc
      181 ggcatttaga attgtagtag gctgctctga tatttccttg agtgtaaaat gtgcatattc
      241 tcctttatac acgtcagcaa attctttgga tactttggtg atctgatgct gtactggatt
      301 tgcatcaaaa tcaaaaatct tgatcccaga tttgccgatg atgacaaact ctctattgtc
      361 taaataaatt acttcgtctg tatgttcgac aaatcctaaa acatcacttg aaatgaaata
      421 tccttccttt gcaattccta ttattagtgg ttcgtggaat cttgctgcgg ccagtgttcc
      481 gtcctcaaaa actgctacaa aagcatagtt accttttagt tgcatgacag tatctatcat
      541 ggaatttttt atttccctag ttttgtcaaa gtggtattgg agtagatttg caattacttc
      601 actatctgtc tggcttttga aggtgtaacc tttttgttcc agatcttttt tcaactcctc
      661 gtggttttct attatgccat tgtgtacaat ggctacctcc cctgtgcttg aaggatgagg
      721 atgtgcattt atgtcagtca ccatgccatg agtagcccat cttgtatgac ctattccgac
      781 tgttccagac agctcgtcaa gttttgcagc tttatttact tcgagaactt ttcctactcc
      841 ttttctaact gaaattcctt tatcagcaaa tgtggcaacc cccacactat cataaccacg
      901 atattccata cgttttagtc ccttgaccaa tattggcgct gctggactaa accccagata
      961 acctattatc gaacacatac tgatatctta tgtttcctag atacataata attacgtata
     1021 ttttactcac ttgattgttc agcttctact gcaacaggct tttcctgctt tactttacca
     1081 aggtctacat cgggtgaaag atgtacttcg ttttcttctc ctacagctac tgtgtaggat
     1141 ggaatagtta ctatcctttc tcctatcatt acatgaccat gcacgactac ttgccttgca
     1201 agataaggac ttttgatatt tgctttcttt tgaataaccg tttgcaatct acgagctaac
     1261 agatcagtta ctttcaaatt caaaacgtca tctaaagtag aatcttcttt aaccaatcca
     1321 attctggaaa gtgatttcat cagagttggt tcctttttgt ttcttacatc ctgggttagt
     1381 gctaaaagag atcttgcctg atttctaatt cgtgagagtt ctgtatgagc tttccaaagt
     1441 tctcttttat tcttaagacc atatgtacca agcacataaa gctcttcatt tagcagatca
     1501 taatttagcg gtctctttgg tcttctccac attttgtgtg aattctttgg ataatctccc
     1561 atcacttttc acctattttg tcttcttctc cgcggctggt tttgctggag gaggagtctt
     1621 ggtgtctttt gcaggagctg ccgcttttgg agctgctgcg cctttctcag cgggtgctgc
     1681 tgctgcacct ggagcagctg ctgcacccgg agctgctgca cccggagctg ctgcaccctc
     1741 tggtgtggca ccagctggaa gaatctttcc acctttgcgg actcctactg caccaccctt
     1801 tctaccagta gtgcgagttc tttgtcctcg aacttttaat ccataagtat gacgaaaacc
     1861 tctccaacta ttcatgttct tttctctttc aatgtcgttt ctaacattaa agtcaatatc
     1921 tgaagtaatc aaatgtaaat tatcaccaga atccatatct tttcgtctat tcagaaacca
     1981 cggtggtatg ttcacggatg acgggcttct cattgctttt tcaatttcca ccacttgaga
     2041 ttctgtaaga aaacccacat tgctatttgg atttattttc aatacgtcca agatagcttt
     2101 tgcaaaattg tagcccattc cttttatctg gcttattcca atgattgtct tcttagtacc
     2161 aggaatatct tttcccgcaa tccttacaat gtgtctaaat tcttgtgaag acaagtattg
     2221 gaaaatccta cttttccccg ataaaaacca tgctaaataa taatacttta aatcggaatt
     2281 agacagtaat tactatattg actcaggatt ttgaaaatct tgttactcga agctacactt
     2341 cagcacctaa atattccgag gtaatggcag gtgtgccaga agattataaa caaattaaga
     2401 cattaggtga tcttctagaa ataaattaca agatagttgg cgcaaaagaa caactacgac
     2461 gtaacttgat ttcaaagatc agaacaaacc aaacaaaata tcctggcata attgggtttg
     2521 aaaatgatgt tataccagct attgataggg ccatactatc ttctcatgac ataattctag
     2581 ttggacaaat aggtcaagct aaaacaagaa ttgcacagac aattgcagaa aacttactct
     2641 cacctatgcc ggtgataaga ggaagtgtaa caaatgactg tcccatggat ctcccagcaa
     2701 atgagttaat tctattgttg caagataaag aaaatccaat gtctgttcca aaattctctg
     2761 ttgaagcaga aagcttagaa aagattcgta ataacaaact tgatacctca attgaatggg
     2821 tggaaggtaa ggacagattc aaatacattt tggcaacacc tgacatttct gtaaaagatc
     2881 tagttggtca gattgatgca ataaagataa
//
LOCUS       DASPUS010000088         2376 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1821758, whole genome shotgun sequence.
ACCESSION   DASPUS010000088 DASPUS010000000
VERSION     DASPUS010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2376)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2376)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2376
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1821758"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1006
                     /gene="thiC"
                     /locus_tag="VEJ68_01925"
     CDS             <1..1006
                     /gene="thiC"
                     /locus_tag="VEJ68_01925"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HXX05556.1"
                     /translation="RTLLEAAPITFGTVPVYEAYSYGVEKHKNPLDITEDDFLNAFEN
                     NIKDGVDYTTIHSGITKDIAKRILSVKRHAGIVSKGGTITAAWMLKYDKENPYFEHFD
                     YLIELARQYDVTFSLGDALRPGSILDSHDELQVQEMINVSRLTKRAHEKDVQVMVEGP
                     GHVPLNEVAANVRLAKSLIGDVPYYVLGPLVTDVASGHDHIASAIGAAISASEGVDLL
                     CYLTPAEHLALPTAEEVKAGLIAYRIAAHAADLVKLREKAIIWDMEMTEARRTLNWEK
                     QISLSIDPEEAARIHARAGQLKGNTVPCTMCGGACVYIMLPQQRYNTPEEIEKLQQTN
                     "
     gene            complement(989..1393)
                     /locus_tag="VEJ68_01930"
     CDS             complement(989..1393)
                     /locus_tag="VEJ68_01930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HXX05557.1"
                     /translation="MHSTRIVTVFLTQDDKYLILKRSEKVKTMKNLWAGISGIIEGNE
                     EPLYRAKREIFEETGIPENKITLLKSAPAIRIDSPQYVNHEWLIFSFLFSVQNPTITL
                     NWENKEYRWISPSEIKRYETVPNLDKVLVSLL"
     gene            complement(1394..2248)
                     /locus_tag="VEJ68_01935"
     CDS             complement(1394..2248)
                     /locus_tag="VEJ68_01935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018039383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004665 - prephenate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase/arogenate dehydrogenase
                     family protein"
                     /protein_id="HXX05558.1"
                     /translation="MKKKIAIIGSEGQMGKFFTRYFLEKGFEVIGYDSEREILNKSIT
                     KAQSLVGAILPADYVILCIPVKRTPETIRLIAKEMKRESHLIDISSLKLKTAAALSKI
                     PDKINPICIHPMFGPGTKKLKGQNIISIPIRDAKKEIAVAKSLFSEANFVQIDATEHD
                     KKIAIILGMTHLSNLVLANILAKEENFALVEKMGGTTFKAQKLLTAGIMTESQELIGT
                     IISNPEIRKYAEEFWKDIGRMLILIQENRTEEILKYISSVKERLAKNINLDDAYKKLV
                     TMVNSVEK"
BASE COUNT          692 a          451 c          451 g          782 t
ORIGIN      
        1 aagaaccctt ctagaagcag ctcccataac atttggtacg gtacctgtat atgaggcata
       61 tagttatgga gtggaaaaac acaagaaccc acttgatatc actgaagatg attttcttaa
      121 tgcatttgaa aataacataa aagatggtgt agattatact acaatacatt ctggtattac
      181 aaaagatatt gcaaaaagaa ttctttccgt aaaaagacac gccggtatag taagcaaagg
      241 aggaactata actgccgcat ggatgctaaa atatgataaa gaaaatcctt actttgagca
      301 ctttgattat ctaattgaac tcgctagaca atatgatgta acttttagtt taggtgatgc
      361 tctaagacca gggtccatac ttgactcgca tgatgagtta caggttcaag aaatgataaa
      421 cgtctcaaga ttgacaaaac gtgctcatga gaaagatgtc caagtaatgg tagaaggacc
      481 tggacatgtt ccattaaatg aagtagcggc aaatgtaaga ctggcaaaat cactgattgg
      541 cgatgtccca tattatgtac tgggcccact tgtaacagat gttgcttcag ggcatgatca
      601 tatcgcaagt gctattggtg cggcaatatc tgcaagtgag ggagtagact tgttatgtta
      661 tcttactcct gcagaacact tggctctgcc gacagctgag gaggtaaagg ctggtctaat
      721 agcttacaga attgcagcac atgcagcaga tcttgtcaag ctcagagaaa aggccatcat
      781 ttgggatatg gagatgacgg aggcacgaag aactcttaac tgggaaaaac aaatttcatt
      841 atcgatagac cccgaggagg ctgctcgtat acatgcaaga gcaggtcaac taaagggaaa
      901 cacggtacca tgtacaatgt gtggtggagc atgtgtctac attatgttgc cccaacaacg
      961 ctataacact ccggaagaaa tagaaaaact acaacaaact aactaagacc ttatcaagat
     1021 ttggaactgt ttcatacctt ttaatttctg aaggacttat ccatcggtac tctttatttt
     1081 cccaatttag tgtaattgta ggattttgta ctgaaaataa aaaagaaaaa atcaaccatt
     1141 cgtgatttac atactggggt gaatcaattc gaattgcagg tgcactcttg agaagtgtta
     1201 tcttgttctc tggaatacca gtctcctcaa agatctctct ttttgccctg taaagaggtt
     1261 cctcatttcc ttctatgatt ccacttatac ctgcccagag attcttcatg gtctttactt
     1321 tttcacttcg ttttaaaatt agatatttgt catcttgagt taaaaagaca gttactattc
     1381 ttgtggagtg caattatttt tcaacagaat ttaccattgt aactaatttc ttgtatgcat
     1441 catctaggtt tatgtttttt gcaagtcttt ctttgacact tgagatgtat tttaaaatct
     1501 cttctgtcct attttcctga atcaaaatga gcatcctgcc tatgtccttc cagaactctt
     1561 ctgcatattt tcttatttct ggatttgaga ttatagtccc aattagctct tgtgattcgg
     1621 tcattatgcc agctgtgaga agtttttgtg ctttgaaggt ggtaccaccc attttttcta
     1681 ctaatgcaaa gttttcttct tttgccagaa tatttgctag taccaaattc gaaagatgtg
     1741 tcattcctaa aattattgca atttttttgt catgttctgt ggcatctatc tgaacaaaat
     1801 ttgcttcact gaatagagat ttcgcaactg ctatctcttt ttttgcatct cgaattggaa
     1861 ttgaaatgat gttttgtccc tttagtttct tggttcctgg tccaaacatt gggtgaatac
     1921 aaattggatt gattttgtct ggtatctttg acagggccgc ggcagtcttt agcttaagag
     1981 atgaaatatc aataaggtgg gattcccttt tcatttcctt tgcaattagt ctgattgttt
     2041 caggagtgcg tttcacagga atacaaagta ttacataatc agcaggtaag attgcaccta
     2101 caagtgactg ggcctttgta attgacttgt ttaaaatctc tctttcagaa tcatacccaa
     2161 ttacctcgaa gcccttctca agaaagtatc ttgtgaaaaa cttgcccatc tggccttctg
     2221 aacctattat ggcaatcttt tttttcattt ctgttctctc atggtctctt ctattatctg
     2281 caatccttga ttaagtgtat cttctggttg acacgcagat atcctgataa atccttgata
     2341 gttgccaaat ccttcgcctg gggcaaccgc cactcc
//
LOCUS       DASPUS010000089         2145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1548825, whole genome shotgun sequence.
ACCESSION   DASPUS010000089 DASPUS010000000
VERSION     DASPUS010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2145)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1548825"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..844)
                     /gene="asd"
                     /locus_tag="VEJ68_01940"
     CDS             complement(<1..844)
                     /gene="asd"
                     /locus_tag="VEJ68_01940"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HXX05559.1"
                     /translation="MKKRVAIIGVTGAVGQEFVVTLNNHPWFEVKQIAASERSATKKF
                     VDAIRDPTSGILKWHIRDPIPEYVKEMVVESVDDIRPENLDLIFSSVESDAAKEIESR
                     FAKDIPVISTSAAYRYESDVPILIPGINDDHVALLDTQRKNRGWKGFIAPLPNCTTTG
                     LAITMRPLLDKFGVQKIIMTSMQSMSGAGRSPGVSALDITDNIIPYIPKEEEKVRIET
                     GKILGKLVDGKIDPAKMKVSCTCTRVPVIDGHTETVFVETTDHTDPEHAKKAMQDFSS
                     KISVT"
     gene            933..2012
                     /gene="cobD"
                     /locus_tag="VEJ68_01945"
     CDS             933..2012
                     /gene="cobD"
                     /locus_tag="VEJ68_01945"
                     /EC_number="4.1.1.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0048472 - threonine-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine-phosphate decarboxylase CobD"
                     /protein_id="HXX05560.1"
                     /translation="MKLGIERKIANHKPIAHGGIYYAGLGYDSKIIDFSSNVNPLGYP
                     PSILKDLKKEYPFFSVYPDPDSTRLRNYLEKYTGVSKDHIIVGNGATEIIYNFCRAFV
                     NGRKVLIPIPTFGEYESAAKLHGASVYFLKTMKLDKEISKLLDIIPKHDCVFICNPNN
                     PIGSLIKHKDMLKIVQLAHERSVLLFVDECFIEFVSNAKESIISRLKEFDNLFVLRSL
                     TKSFGLAGLRVGYGLGSSQMIKVLQKIKIPWNVSGFAQNVAVRVLSDRLHLEKTRIVI
                     ARERKFLKESISKINGFSCYDSDVNFLLIKSRRDSKYIQKKLLKKHILIRDCSTFRGL
                     NSKFIRVAVRTRHKNLKLVKALQKL"
     gene            2009..>2145
                     /locus_tag="VEJ68_01950"
     CDS             2009..>2145
                     /locus_tag="VEJ68_01950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobyric acid synthase"
                     /protein_id="HXX05561.1"
                     /translation="MTKVLMVQGTSSGAGKTTLVTALCRIFADDGYRVAPFKSQNMSS
                     YS"
BASE COUNT          682 a          397 c          392 g          674 t
ORIGIN      
        1 ctgttacact tatcttactt gaaaaatctt gcattgcttt ctttgcgtgc tcaggatcag
       61 tgtgatcggt tgtttcaaca aaaactgttt cagtatgtcc atcaattact ggaactcttg
      121 tacatgtaca actcactttc attttggcag gatctatttt accatctacc agctttccaa
      181 gaatttttcc tgtttcaatt cttaccttct cttcttcttt tggaatgtat ggaattatgt
      241 tgtcagtaat atctaaagca gagacaccag gagatcttcc agcacctgac attgattgca
      301 tcgaagtcat gattatcttt tgaactccaa acttgtcaag tagtggtctc attgttattg
      361 caagtcctgt tgtagtacag tttggcaatg gcgcaataaa ccctttccaa ccgcgattct
      421 ttctctgtgt atctagtaat gcaacatgat catcatttat ccctggaatc aaaattggta
      481 cgtcagattc atatctataa gcagcagagg tacttataac tgggatgtct tttgcaaatc
      541 ttgattcaat ctcctttgcc gcatcgcttt caacagaact aaaaatcaag tctagattct
      601 caggtcttat gtcgtcaacg gattccacga ccatctcttt gacatactca ggaatagggt
      661 ctctgatatg ccattttaga atgccgctgg tggggtctct gatggcgtcc acaaactttt
      721 ttgtggccga tctttccgag gcagctatct gttttacttc aaaccatgga tgattgttca
      781 gagtaacaac aaactcttgt cctactgcgc cagtaacacc tatgattgct actcgtttct
      841 tcatatatgg aaaaatgctg cctaaacaat taatattcct ttagaaggca agaccaaaac
      901 acaactaaat accattatga tgtcacgaga ttgtgaaact tggaatagag agaaagattg
      961 caaatcacaa acctatagcc catggaggaa tttattacgc aggccttgga tatgactcta
     1021 agataataga ctttagttca aacgtaaatc ctcttggtta tccaccatca atattaaaag
     1081 acttgaaaaa agaatatccc ttcttttcag tatatcctga tcctgattcc actagattgc
     1141 gaaattatct agaaaagtat acaggtgtat ccaaagacca tattattgtt ggaaacgggg
     1201 caactgagat aatctataat ttttgtaggg catttgtgaa tgggcgcaaa gtactgatac
     1261 caataccaac atttggtgaa tacgagtcag ctgcaaagtt acatggtgct tcagtttatt
     1321 tcttaaagac catgaaactt gacaaagaga tctcaaaact ccttgatatc ataccaaaac
     1381 atgactgtgt gtttatttgc aacccaaata atccgattgg ttctctaata aaacacaaag
     1441 acatgctcaa gatagtccag ttagctcatg aaagatctgt actgcttttt gttgatgaat
     1501 gctttattga atttgtttct aatgcaaagg agagcatcat atctcgattg aaggaatttg
     1561 ataatctctt tgtcctgaga tctcttacaa agtcatttgg tttagcaggt ctgagagttg
     1621 gttatgggct tggaagttca cagatgatca aagtcttgca aaaaataaaa attccgtgga
     1681 atgtaagtgg ctttgctcaa aatgtagcag ttagggttct atcagataga ctacatcttg
     1741 aaaagacaag aatcgtaatc gcaagagaaa gaaaattttt gaaagaatct atatcgaaaa
     1801 ttaatggatt tagttgttat gactctgatg taaattttct tttaataaaa tccaggagag
     1861 attcgaaata catacaaaag aaactgctga aaaaacatat tctgataaga gactgtagta
     1921 cgttcagggg attgaatagc aaattcataa gagtggcagt acgaaccaga cacaaaaatc
     1981 tgaaattagt aaaggctttg caaaagttat gacaaaagta ttgatggtac aaggaacatc
     2041 atctggagct gggaaaacaa ctcttgttac agctctgtgc agaatttttg cagatgatgg
     2101 ttacagagta gccccattca aatcccaaaa catgtcatca tattc
//
LOCUS       DASPUS010000090         3753 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_872087, whole genome shotgun sequence.
ACCESSION   DASPUS010000090 DASPUS010000000
VERSION     DASPUS010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3753)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3753
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_872087"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..271
                     /locus_tag="VEJ68_01955"
     CDS             <1..271
                     /locus_tag="VEJ68_01955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010191014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05562.1"
                     /translation="NVRKALVSLAIEKSLLDIGKPTYDKVVNLLKKEYNSYLPECYEH
                     PEYLSEILKMLYGDASRQIIKSINIELEEFSNIGQVEKFLQVIAQ"
     gene            493..633
                     /locus_tag="VEJ68_01960"
     CDS             493..633
                     /locus_tag="VEJ68_01960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05563.1"
                     /translation="MNALQYLVSGYSVKQNGKKILKGIRIAIKTLALDLDGLETSKKQ
                     PE"
     gene            complement(682..1065)
                     /locus_tag="VEJ68_01965"
     CDS             complement(682..1065)
                     /locus_tag="VEJ68_01965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015021025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HXX05564.1"
                     /translation="METKRKLIPMIKENCSFEGYDVSSLMSETSKLRKIITKRGTLEI
                     LIPLCCTTEPVRHKQFKQSLKGISSKTLATRLKELEKSGILERLSYNEIPPRVEYKLT
                     HKGQELVKSVIDLLQWMKKWSALNR"
     gene            1133..1558
                     /locus_tag="VEJ68_01970"
     CDS             1133..1558
                     /locus_tag="VEJ68_01970"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010191530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030612 - arsenate reductase (thioredoxin)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HXX05565.1"
                     /translation="MGLFGKKPKKMVLFACIENSARSQMAEGFFRKYAPKDWDAMSGG
                     TNPKSYINPIAIEVMKEVGVDISKHSAKMLSEEQIRKADLKVNMGCMDTKDCPTLVLG
                     GYEDWGIEDPKDKPIEKVREIRDQIESKVKKLASEVGQK"
     gene            1655..2413
                     /gene="arsM"
                     /locus_tag="VEJ68_01975"
     CDS             1655..2413
                     /gene="arsM"
                     /locus_tag="VEJ68_01975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite methyltransferase"
                     /protein_id="HXX05566.1"
                     /translation="MNESIKEKVKERYSKIALTGNSDCCCMPGECTTADSPIDATKII
                     GYDKEDLQSIPQASILGVGCGAPIQYADMKEGETILDLGSGAGIDVFLSANKVTKSGR
                     VIGIDMTDEMLEKARKNARDGNYTNVEFRKGDIEKNIPVDDNTVDAVISNCVINLTTD
                     KTNAFKEVHRILKKGGRMVISDLVTDRELAIDQVNLEQWCSCIDGALTQEHYLECIKN
                     AGFSNIRILNEQVYMEGEKVNGRKITSLVIKAVK"
     gene            2419..2829
                     /locus_tag="VEJ68_01980"
     CDS             2419..2829
                     /locus_tag="VEJ68_01980"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030612 - arsenate reductase (thioredoxin)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HXX05567.1"
                     /translation="MDLDQSKKILFVCVENAGRSQMAEGFFRKYAPAGYEPISAGTKP
                     TLEINPIAVEAMREIGIDLTKQKPKILTNDLINGSVLSVNMGCMDKAECPALFMKGAV
                     DWGIEDPKGKPLDQVRKIRDSIEQKVIEICKTLE"
     gene            2811..3497
                     /locus_tag="VEJ68_01985"
     CDS             2811..3497
                     /locus_tag="VEJ68_01985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015021028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HXX05568.1"
                     /translation="MQNSRITSKLTSNQKRFIAELIGTFVVVVFATGSVVLDAKYVGT
                     YGLWFVALAPAVAVAGMVYAFGKISMAHFNPAVTVGFLITKHTPKKLFPLYLGAEIIG
                     AILGSLFVKYVIGTQAHLGANAPDYNFPLPLIFGVEILTTALLMGVILVVVHTKGLRG
                     FSGIAIGGMVGLDIFFLAFISGASMNPARSLAPALISWYLNDLWLYWTATFVGSSIVG
                     IIYRKKFLPS"
BASE COUNT         1260 a          604 c          769 g         1120 t
ORIGIN      
        1 caatgtaaga aaggcattag tatcattggc tattgaaaaa tcacttttag atattggaaa
       61 accaacctat gataaagttg taaatcttct aaaaaaggaa tacaactctt atctgccaga
      121 atgctatgag catcctgaat atctgtctga gatactcaag atgctatacg gggatgcaag
      181 tagacagata ataaaatcaa tcaatattga actagaagaa ttttctaata taggtcaagt
      241 agaaaagttc cttcaagtaa tagctcagta gtaaaccctc agattggctt tctttaatcg
      301 gtaaatatga taaaagagta gtatcccttt tatttcagat cgacgatatt acaattacac
      361 tgagctagga acatagccaa tccaacccta ttgtacttat cctagttcag cataccatta
      421 tgcacttgct aattactaaa gattatcttt ctaattttat gaaaagttga atcgtgatca
      481 aacttttatg cgatgaatgc actacaatat ttagtgtctg gttattccgt aaaacaaaat
      541 ggtaagaaga tactaaaagg tattaggata gcgatcaaaa cacttgcctt ggatttagac
      601 ggattagaaa cctccaaaaa acaaccagaa taagacatat tcgttatgtt tgggtagttt
      661 ggtatgctaa aaaatagaaa tttatctatt gagggcagac catttcttca tccattgtaa
      721 gaggtctatc acagacttga caagctcctg acctttgtgt gtaagcttgt attccactcg
      781 tggcgggatt tcattgtatg acaatctctc caatattccg cttttttcaa gttcctttaa
      841 tcttgtagcc aatgtcttac tacttattcc cttcaaggat tgcttgaatt gtttgtgtct
      901 tactggctct gttgtacaac ataggggtat cagaatctca agtgttcccc tctttgtgat
      961 tatttttcta agctttgatg tttcagacat caaggatgag acatcatagc cttcaaaact
     1021 gcaattttcc ttaatcattg gaattaattt tcttttggtt tccatgttta cactaactgt
     1081 aattgattat ccttgacaat ttaaatggtt tactaactaa actatagtag aaatgggatt
     1141 atttggaaaa aaaccaaaaa agatggttct ttttgcatgt atagaaaatt cggcacgaag
     1201 tcaaatggca gaagggttct ttagaaaata tgcaccaaag gattgggatg caatgagtgg
     1261 aggaactaat cctaaatcat atataaatcc aattgcaatt gaggtaatga aggaggtagg
     1321 ggttgacatt agcaagcaca gtgcaaagat gctgtcagaa gagcagatca gaaaagcaga
     1381 tttgaaagta aacatgggtt gtatggatac taaagattgt cctactcttg tgcttggagg
     1441 atatgaagat tggggaattg aagatcctaa agacaaacca atagaaaaag tcagagagat
     1501 aagagaccag atagaatcca aagtaaagaa gctagcatct gaagtgggac aaaagtaaac
     1561 aggggttgtc tttattttca ttagtttcca taattacacc aattgtactt atttctcctc
     1621 gacaacttaa atgacgttat gagaaaattt tggcatgaat gaatcgatca aagaaaaagt
     1681 aaaagaaaga tatagcaaga ttgcacttac tggaaattct gattgttgtt gcatgccagg
     1741 tgaatgtacc accgctgatt ctcctattga tgcaacaaag attataggat atgataagga
     1801 agatttgcaa tcaattcctc aggcatccat tttgggtgtt ggatgcggtg ctccaataca
     1861 atatgcagat atgaaggaag gtgagacaat tctggatctt ggatctggtg ctggaattga
     1921 tgttttctta tctgcaaaca aggtcacaaa atctggcagg gtaataggta ttgatatgac
     1981 agacgagatg ttagagaaag ccagaaagaa tgcaagagat ggaaattata ccaacgtaga
     2041 atttagaaaa ggagatattg aaaagaacat cccagttgat gacaatactg ttgatgcggt
     2101 tattagcaat tgtgtgataa atcttactac cgacaagaca aatgcgttta aggaagttca
     2161 cagaatattg aaaaaaggtg ggaggatggt aatatctgac cttgtaacag acagagaact
     2221 tgccattgac caagtaaacc tagaacaatg gtgtagttgc atagatggag ccttgacaca
     2281 agaacattat cttgaatgca taaagaatgc aggtttttcc aatatccgca ttttaaacga
     2341 gcaagtttac atggaaggtg aaaaggttaa cggaagaaaa atcaccagtc ttgtaatcaa
     2401 agcagtaaag tgattgtcat ggatttggac cagtcaaaga aaattctttt tgtatgtgtg
     2461 gaaaatgctg gaagaagtca gatggcggag ggatttttca gaaaatacgc accagcaggt
     2521 tatgagccaa taagtgctgg tacaaaaccc acgctggaga taaatccaat tgcagtagaa
     2581 gcaatgagag aaattggtat tgacctcacc aaacaaaaac caaagattct gactaatgat
     2641 ctaatcaacg gttcagttct aagtgtaaac atgggttgca tggacaaagc agagtgtcct
     2701 gcgctcttta tgaaaggagc tgttgattgg ggaatcgagg atccaaaagg caaaccactt
     2761 gatcaagtcc gcaagattcg agattccatc gaacaaaagg taattgaaat ttgcaaaact
     2821 ctagaataac aagcaaatta acttcaaacc aaaagaggtt cattgctgaa ttaattggca
     2881 catttgtcgt tgtagtattt gcaactggtt cagttgtatt agatgcaaag tatgtaggaa
     2941 catatggtct ttggtttgtc gcattggctc cagctgttgc tgtagctgga atggtttatg
     3001 catttggaaa gatatcgatg gcacacttta acccagcagt aactgtggga tttcttatta
     3061 caaaacacac accaaagaaa ttatttccgt tatatcttgg cgcagaaata attggcgcaa
     3121 tacttggaag cttatttgta aaatacgtga taggcacaca ggcacatctc ggagcaaatg
     3181 cacctgatta taattttcct ctgccgttga tatttggtgt tgagatttta actacggcat
     3241 tattgatggg agtaattcta gttgtagttc atactaaagg attgagaggt tttagcggaa
     3301 ttgcaatagg aggaatggtt ggattagata ttttcttttt agcatttatc tcaggggctt
     3361 caatgaatcc tgcaagatct ttggcaccag cactaatatc gtggtatctt aatgacctgt
     3421 ggttgtattg gacagcaact tttgtcggct ctagtattgt tggtattatt tacagaaaga
     3481 aatttttacc ttcttaagac caactcattt tcagcatcca caacgtctta ttcttctacc
     3541 gtttcacaac gcagtgttaa ttctcaaatc tgacattctt gtttctgata taataaactg
     3601 aaaaaacaat cgataacgta acagttccac aaacaagaat ctttattagg tacccgtacc
     3661 gtaccatacg gtaagatgga cgatttaaga ttagaaagtc ttgagggtgt aggccctgta
     3721 acttccaaga agcttagtga tgcaggcgtg cat
//
LOCUS       DASPUS010000091        12333 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1690825, whole genome shotgun sequence.
ACCESSION   DASPUS010000091 DASPUS010000000
VERSION     DASPUS010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 12333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12333)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12333
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1690825"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..257
                     /locus_tag="VEJ68_01990"
     CDS             <1..257
                     /locus_tag="VEJ68_01990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05569.1"
                     /translation="AEGSVSIPVQFQDATTYQVIVEVDGILFQPIPPETATFTLNVGS
                     STPVTNQTVPEFGPIASLVLVFAIVGVVITGARTKVFQKF"
     gene            267..812
                     /locus_tag="VEJ68_01995"
     CDS             267..812
                     /locus_tag="VEJ68_01995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05570.1"
                     /translation="MPDNNPDLRERVVENRGFLKKLQLKVPALKEYRKLEDIRAADQL
                     LRKQVFDRLNEAKSKLELIRKAISDKGDFSNLTAIGTTISQIQQVAGQVVHAQQGSAG
                     ISPNIRIDENALNKLYEYDYNFVNSAEQIFSTASDSLTEYTSGTSSVQAISTKIASIL
                     EDFKHVWKQRLDSVENILVTK"
     gene            847..1926
                     /locus_tag="VEJ68_02000"
     CDS             847..1926
                     /locus_tag="VEJ68_02000"
                     /inference="COORDINATES: protein motif:HMM:NF024813.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HXX05571.1"
                     /translation="MFGRKKEPDFDKGSVVGSTTIEWDSQYKEGNIMWKVPRLIRLND
                     NIVVREDEIAVFFRDGKVLTYFDKPNRYALTDFNAPIVGPLLKFFTGVKQAAEVYYLQ
                     NRYLDGKFGSAEPYQFVDPVFGIVNLRIFGEYRWKITSPENFVNQFVGTFAIQTSDEI
                     ESRLKQQMVLLVFNAIGKMKDSGLKITDIATNLQNIEQLVLANSPANFGQYGVEINKI
                     SGLTISLPEEVQKAIDTRSEMSVLGVNYMQYQAGQAMVDAAKNPSGVAGAGVGLGVGF
                     GAGAGIGSAMAGQMGQGMYQPPMKQCPKCSMMMPVYNNFCPNCGSNQQQVQQPKPQGV
                     ICSKCGTHVAADSKFCSNCGNVLKS"
     gene            1989..2942
                     /locus_tag="VEJ68_02005"
     CDS             1989..2942
                     /locus_tag="VEJ68_02005"
                     /inference="COORDINATES: protein motif:HMM:NF024183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05572.1"
                     /translation="MKCGAKQQPSVQEPPAEKVQSQDGAKEIKCPSCGAPISPKFGEM
                     VITCEYCGSSVTLENSGWKNIAKHTMLPINIQDKDDITENLRKMMDKGLLHRHLQESS
                     SLEQLELTMVPYWIIPATARTNLVATDIAASVGNIATTAALFGVMGGAMGGGFGSRRG
                     GFGPGMMDGMLMGTMLGGGGMMSPANTKKAYTIDASYNCPVIALKALTSYQPHNYEFV
                     LDGRIDFDSKKIPKSVKILNGDINEDAAKNQAKIIVDQLQSERAHSQYHMIQQIDTQI
                     EVSSGELLHVPIWFSRYDHKGKKIILIIDANSGVAINSIGL"
     gene            2992..3936
                     /locus_tag="VEJ68_02010"
     CDS             2992..3936
                     /locus_tag="VEJ68_02010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HXX05573.1"
                     /translation="MNTVRIPKIINFGKNALSETQYPKNALVITTAPPEVSTKWLTKM
                     KITDYLLFDKVEPEPSIETVNKVIAEYKSKNPSMFIGLGGGSSLDVAKYASAELKIPK
                     MLIPTTFGTGAEMTTYCVLKFEGKKKLLQDERFLADVAVIDPYFLEGTPEAIVKNSVC
                     DACAQATEGFDSKRGNEFTKTMCKSAFDVLYDAIINNKPENYPYGSMLSGIGFGNAST
                     TLGHALSYVFSNEGVPHGYSLSSCTTVAHRFNKSIFYEKFKEVIEKLKFDKLTLKAPF
                     DQAADVVMTDKGHLDPNPIPVSKDDVVHLLQDIVNGRL"
     gene            4073..5398
                     /locus_tag="VEJ68_02015"
     CDS             4073..5398
                     /locus_tag="VEJ68_02015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HXX05574.1"
                     /translation="MQELYSTNHLKDRILEILHQSELDSPCYSKILDYTIDLFHQKGL
                     GIDYYGYHNIIHELEVTYVTLIAAQWESLQGHITKDDIKYLFVAALFHDYDPQKRVDK
                     PHEPDAVNFVKTDKTLELLLKDANIDSNIIAAMILRTTYPWTGEQKEKADLLIDNFYS
                     LSDITRNDPTKVEYYKHLGWFLSVADRIGGYALGDFTYALEMAKKNAHSLAWHPNLIA
                     IRAVTYFEDLLNNESEICNRILAALPRKMRKLFMDNVLGFMKLRETEIQNQAVIIYDK
                     VNLVPTIEPMKTRQTEEFTNAVFSIFEELPHPLQFDRVRFAESIHDSQVIINTLRLGN
                     ENGPIVGYAKGSSLENYKIREGINDPHFGKGDTVFLEPIALKMGYWGLKGGREIRLLF
                     LMQAQSKGYKYLSSFALRDVIEERMRRNEKIEFVKQFDPERWDYYRVRL"
     gene            5483..6568
                     /locus_tag="VEJ68_02020"
     CDS             5483..6568
                     /locus_tag="VEJ68_02020"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HXX05575.1"
                     /translation="MIKFGIQQGLNVARLGLTEDQILTVAMLADKTGYDSIWYMDHSN
                     VPQWNHAIVNDPWVMLSAIASVTQKLELGTCVTDAVRRHPSNIALATITLDRVSHGRG
                     TLGIGAGEAQNIKEFKILWDKPVGRFEEQLQVIKLLFGSSPEKRVSFKGEFYELDNAC
                     LQAKPIRKPHPPIYMAAGAPRTLALCGKYGDGWIPIGYTPELYEEHVKAIKQSMKENG
                     RDGSDFQFAVDIDVYFADDAEVAWAKMKNAVKVSLFKPEVLKVHNIKDIAGFDFKKYF
                     TEYSMSNQEWIVKMREAAQTIPDNVARSSIGIGTPDDIIPVFEKFIKAGVNHFIVRFW
                     GSGYFGSIDKFGSTVLPYFKDQNNPRR"
     gene            complement(6575..7012)
                     /locus_tag="VEJ68_02025"
     CDS             complement(6575..7012)
                     /locus_tag="VEJ68_02025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05576.1"
                     /translation="MGAGVLSNMLKLDEIEANIRAFALIGTSVATFSSFVYHLFGDTI
                     PSFCWDYLKEIGAALIMFAVFVFAISWLLRAKPHKKPAQYFIKVFDVFGQETKIDGIR
                     NDFKTHDVAWSFMKQYKKSYPLYNFALVSDIPNSSRMTIFRYL"
     gene            7064..7696
                     /locus_tag="VEJ68_02030"
     CDS             7064..7696
                     /locus_tag="VEJ68_02030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HXX05577.1"
                     /translation="MQLLGRLEIKSKEKMVEFLNKQEAGRICSIDKDGYPQIIPMNFV
                     YAKDAIYMHSHIKGEKLENIARNQKVGFEVDQSLEFLPSYFTHPTDASQADTLYISVV
                     IKGTGSIVTDRKEKTFALNALMEKYQPEGGYEKLLPDLEVIDAVAIIKVVPITMRGKY
                     KIGQHLEKRSRLELARLILKRNSSSAKNTVKTMGIIETKDGLFVSEEPNW"
     gene            7712..9718
                     /gene="uvrB"
                     /locus_tag="VEJ68_02035"
     CDS             7712..9718
                     /gene="uvrB"
                     /locus_tag="VEJ68_02035"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008299372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HXX05578.1"
                     /translation="MQTLGQNAKDLKVFVRNSTKYYSLLQNPTFELVSDFVPTGDQPQ
                     AIEMLTEGIRKKKIQTLLGVTGSGKTFTIANTIKKTGKNTLVISHNKTLAAQLYSELK
                     QFFPKNNVGYFVSYYDYYQPESYIAQTDTYIEKDTAINEKIERMRLEATAMLLSGEPT
                     VIVATVSCIYSLGSPREWEEMAIIIEKGKKIGRNSLIKKLVNARYDRNDTELVPGRFR
                     IKGDTIDIIPAYSDAVVRISMFGDDVEKISICDPVSLKEKKQISQIKIFPAKHYLVAS
                     DVRKKAVESIKNELKERLSQLRELERQRLEMRTKYDLEMIEELGYCSGIENYSRHFDG
                     RHPGEPPFCLLDFFGDDFLLVIDESHVTLPQLHGMHNGDHTRKKSLIDYGFRLPSAFD
                     NRPLKFEEFEKYVKNTIFVSATPGEYERKKSFQIAEQLIRPTGLVDPTVEVRKTENQM
                     DDLVSEIQKRVDKNQRVLVTTLTKRMAEDLAEYLPKRQVKVRYLHSEIENLQRTEIIR
                     QLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRNNTSLIQTFGRAARNSDG
                     AVIMYADTLTQSMKLAMLETERRRKKQFEYNKKMGITPTTIVKAIPQQTIELDEVKHM
                     SRHDLQTFAIELEATMKKYAEELDFERAIESRDKLTKIQKELAK"
     gene            9715..>12333
                     /gene="uvrA"
                     /locus_tag="VEJ68_02040"
     CDS             9715..>12333
                     /gene="uvrA"
                     /locus_tag="VEJ68_02040"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HXX05579.1"
                     /translation="MNDKLIIRGARHHNLKNINVDIPKNKSVVITGLSGSGKSTLAFD
                     TIYAEGQRRYVESLSAYARQFLEMMDKPDVDSIEGLSPAISIQQKTTSKNPRSTVGTI
                     TEIYDYLRLLYARIGIPHCPRCGRKISNQSVESICESILKESEGKKILILAPLIRRKK
                     GTYEKLFEQVKKSGYSRIRIDGDIVELNGEAPTLDKQKWHNIEIVVDRLKASWEEKSR
                     LFESIQTATKAGKGTVMILNGEERVFSQSNACPHCGITVGELEPRTFSFNSPFGACKT
                     CHGLGVKMEFDPELLIPDKTRSILDGAIIPWSGRFSSFRRQTLRDVGKKFGFDLMTPI
                     NKMTPKQLSVILYGTQELVRFSYEAQTTDSRWQYTNTFSGVIPSLQKNFAETDSESKR
                     EELAKFMRETPCTTCKGLRLKDEALSVLINSMSIMNVCDLSIDSCYEFFHNLQLTDTE
                     KYIAKSVLKEILSRLEFLKNVGLNYLTLNRVSATLSGGESQRIRLATQIGSNLTGVLY
                     VLDEPTIGLHQRDNAKLIKTLVKLRDLGNTILVVEHDEEVMRNSDWILDLGPGAGVHG
                     GNVVYTGTIDGILKNRESRTGLYLRNHNAIKLIKKTRNQKGKLVVKGAAENNLKNIDV
                     EFPLGLMIAVTGVSGSGKSTLVNDILFKALAAHFYNSVDRPGKHKAILGQDDLDKVIG
                     IDQSPIGRTPRSNPATYIGAFTPIRELFASTELSKERGYTPGQFSFNVADGRCFACEG
                     DGVKKIEMQFLSDVYVVCDECKGKRYNSETLSVLYKSKNISDILSMTVDEALEFFTNI
                     PSIQRKLQTIADVGLGYIKLGQPATTLSGGEAQRVKLASELSKRDTGQTVYILDEPTT
                     GLHFADVEKLLEVLNRL"
BASE COUNT         4414 a         2207 c         2458 g         3254 t
ORIGIN      
        1 ccgcagaagg ttcagttagc attccagttc aatttcaaga tgctacaact tatcaggtga
       61 tcgtggaagt tgatggaatt cttttccagc caataccacc agagactgca acgtttactc
      121 taaatgttgg tagttcaaca ccagtaacaa atcaaactgt tcccgaattt ggtccaattg
      181 catcacttgt tctagtcttt gcaatagttg gtgttgtaat aaccggggca cgaactaaag
      241 tatttcaaaa attctagatg gtatagatgc cagataacaa cccagatttg agagagagag
      301 tagttgaaaa tcgcggattt ttgaaaaagc tacagttgaa agtgcccgcg ttaaaggaat
      361 atcgaaaact tgaagatatc agagcggcag atcagttact tcgaaaacaa gtattcgata
      421 gactcaatga agcaaagtct aaactagaat taattagaaa ggcaatatcg gacaagggag
      481 actttagcaa cttgaccgca ataggcacca caatttctca gattcaacaa gtagcaggac
      541 aagtggttca tgcccaacaa ggctcagctg gaatttcccc aaatattaga atagacgaaa
      601 atgcactcaa caagttgtat gaatatgact acaattttgt taatagtgca gaacaaatct
      661 tttctactgc ttcagattca ttaacagaat atacctcagg cacgtcttct gtacaggcca
      721 tctcaacaaa aattgcctcc atactcgagg atttcaaaca cgtatggaaa caaagattag
      781 attcggttga aaacatactg gtgacaaaat aagatatgac aataaaaatc gaaggtgaac
      841 aaatagatgt ttggtcgtaa aaaagaacct gattttgata aaggtagtgt tgtaggatct
      901 accactattg aatgggattc acaatacaaa gaaggcaaca tcatgtggaa agtacctcga
      961 ctcataagat taaatgataa cattgtagta cgagaagatg agattgccgt atttttcaga
     1021 gacggaaaag tactaacata ttttgataaa ccaaacaggt atgcccttac tgattttaat
     1081 gcacctatag ttggaccact cttaaaattt tttactggag tcaaacaggc ggcagaagta
     1141 tattatttac aaaatagata tcttgatgga aaatttggtt cagcagagcc atatcaattt
     1201 gtagatcctg tatttggaat agtgaatctg agaatttttg gagaatacag atggaagata
     1261 acttcacccg agaattttgt taatcaattt gtaggaacct ttgccataca aacatctgat
     1321 gaaatagaat caagactcaa gcaacagatg gttcttctag tctttaatgc cataggaaaa
     1381 atgaaagaca gtggtctgaa aattacagat attgcaacca atttacaaaa catagaacag
     1441 ttggttttag ctaattcacc tgcaaacttt ggccagtacg gtgttgaaat taataaaata
     1501 tcagggctta caataagcct tccagaagag gttcaaaagg caatagacac aagatctgag
     1561 atgtctgtcc ttggagtcaa ctacatgcaa tatcaagcag gacaggcaat ggttgatgcg
     1621 gcaaaaaacc cctcaggtgt tgcaggagct ggagttgggc taggagtagg attcggtgca
     1681 ggggcaggaa tcggtagcgc aatggcagga cagatgggac aaggcatgta tcagcctccg
     1741 atgaagcagt gtccaaaatg tagcatgatg atgccagttt acaataattt ctgtccaaat
     1801 tgtggttcta atcaacaaca agtacaacaa ccaaaaccac agggtgtcat atgttctaaa
     1861 tgtggaactc atgttgcagc agattcaaag ttctgttcta actgtggcaa cgtattgaaa
     1921 tcataggaga gattcaaatg ttttgtatca aatgtggttt acaacttcca gacaatgcat
     1981 ccttttgcat gaaatgtgga gccaaacaac aaccatccgt tcaagaacca cctgcagaga
     2041 aagtccaatc acaagacggt gcaaaagaaa tcaaatgtcc tagttgtgga gcacccatat
     2101 caccaaaatt tggcgagatg gtcataactt gtgaatattg tggaagtagc gttacattag
     2161 aaaattcagg atggaaaaat attgcaaagc atactatgct tccaatcaat attcaagaca
     2221 aagatgacat cactgaaaat ttacgaaaga tgatggacaa aggccttctg catagacatt
     2281 tacaagaaag ctcaagcttg gaacaacttg aattgacgat ggtaccgtat tggataattc
     2341 ctgcaactgc aagaacaaat ttggtagcaa ctgacattgc agcaagtgta ggcaatattg
     2401 caacaacggc cgctttattt ggagtgatgg gtggagcaat gggcggtggt tttggatcta
     2461 gaagaggagg atttggccct ggcatgatgg acggaatgct gatgggtacc atgttaggag
     2521 gcggtggaat gatgagtcct gcaaatacca aaaaagccta tacaattgat gctagttaca
     2581 actgtcctgt aattgccctc aaggcattaa cttcatacca gcctcataac tatgaatttg
     2641 ttttggatgg acgaatagat tttgattcca aaaagattcc aaagtcagtc aagattctca
     2701 atggagatat caacgaggat gcggcaaaaa atcaggcaaa aataattgta gaccaattac
     2761 agtcagaaag ggcacattct cagtatcaca tgattcagca aattgatacc cagatagagg
     2821 tctcaagcgg cgaactgtta catgtcccaa tctggttctc cagatacgat cacaagggca
     2881 aaaaaataat tttaattatt gatgccaata gtggtgtcgc gataaacagt ataggattgt
     2941 aaaaatcgca ccaaagaaga gtataataat aattaaaaat cttgttttat tatgaacaca
     3001 gtaagaattc caaaaataat aaactttgga aaaaatgctc tatctgaaac tcagtatcca
     3061 aaaaatgcac ttgtgataac aactgcacct ccagaagtat caacaaaatg gcttacaaaa
     3121 atgaaaatca ccgattattt gctatttgac aaagtagaac cagaaccgtc tatcgaaacg
     3181 gtaaacaaag taattgcaga gtacaagtca aaaaatccat ccatgtttat cggtttgggc
     3241 ggaggaagtt cgttagatgt agcaaagtac gcaagtgctg aacttaaaat accaaagatg
     3301 ttaattccga caacctttgg aactggagca gaaatgacta cttattgtgt actcaagttt
     3361 gaaggaaaaa agaaactttt gcaagatgag agatttcttg ctgatgtagc tgtgattgat
     3421 ccttattttt tagaaggcac accagaagca atagttaaaa attctgtttg cgatgcatgt
     3481 gcgcaagcaa cagaggggtt cgatagtaag agaggaaatg aatttacaaa aacaatgtgc
     3541 aagtcagcgt ttgatgtatt gtatgatgca ataatcaaca acaaacctga aaattatcca
     3601 tatggttcaa tgttatcagg cattggtttt ggaaatgcat ccacaacact gggtcatgca
     3661 ttatcatatg tgttctcaaa tgaaggagtc cctcatggat actcactttc atcatgtacc
     3721 accgttgcac ataggtttaa caaatccatt ttctatgaaa aattcaaaga agtaatagaa
     3781 aagttaaagt ttgataaatt aactctcaag gcaccttttg atcaggctgc ggatgtggtc
     3841 atgaccgaca aaggacacct agacccaaac ccaattcctg tttcaaaaga tgacgtagta
     3901 catctcttgc aagatattgt aaacggaaga ctctagaaaa ccaaaaactt cattttttta
     3961 tcataatctt cttctaaatg gcgatgaagt ttttgcaaga aaattttgaa tttctataaa
     4021 ttttttatta atctatttat gatactggtt gcatagagat agagaagcca caatgcaaga
     4081 gctatactct actaaccatc taaaagacag gatattggag attttgcatc aaagtgagct
     4141 tgactctccc tgctattcca agatattgga ttatacgata gacctatttc atcaaaaagg
     4201 attaggaatc gactattatg gatatcataa catcatacac gagctagaag tcacatatgt
     4261 tactcttatt gccgcacaat gggagagcct tcaaggacac attacaaaag atgatataaa
     4321 atatcttttt gttgcagctt tatttcatga ttatgatcca caaaaaagag tagacaaacc
     4381 acatgaacct gatgcagtaa attttgtaaa aaccgacaag acgttagagt tgctgctaaa
     4441 ggatgccaac atagattcaa acataattgc tgccatgatt ttacgaacta cttatccgtg
     4501 gacaggagaa caaaaagaaa aagcagattt actaatagat aatttctatt cattatcaga
     4561 cataacaaga aacgatccta caaaagttga gtattacaaa catttaggct ggtttctttc
     4621 tgttgcagac agaataggcg gttatgccct gggcgatttt acatatgccc ttgagatggc
     4681 aaaaaagaat gcgcattctt tagcatggca tcccaatctg atagctatta gagcagtaac
     4741 atattttgaa gaccttttaa acaacgaatc cgagatttgt aacagaattt tagctgctct
     4801 tccaagaaag atgcgaaaat tgtttatgga taacgtatta ggatttatga aactccgtga
     4861 aactgagatt caaaatcaag cagtcatcat ttatgacaag gtaaatctag ttccaacaat
     4921 tgaaccgatg aaaacaaggc aaaccgaaga atttacaaat gcagtatttt ccatttttga
     4981 ggaactaccg catcctctac aatttgatag agtacgattt gcagaatcta ttcatgattc
     5041 acaagtaata attaacacat taagacttgg caatgaaaac ggacccatcg taggatatgc
     5101 aaagggcagt tcactcgaaa attacaaaat tcgtgaaggt atcaacgatc cccattttgg
     5161 caaaggggac actgtgtttt tggagccaat agcactcaag atgggctatt ggggcctaaa
     5221 gggaggacgt gaaattcgtc tgttattttt gatgcaagca cagtctaaag gatacaagta
     5281 tttgtcaagt tttgcattaa gggacgtaat tgaagaaaga atgcgacgaa atgaaaagat
     5341 agagtttgta aagcagtttg accctgaaag atgggactat tatagagtca gactgtaata
     5401 ttgataaaat taatcaattt tttaacgaat cttacaaact taaataatgc ttttgtaacc
     5461 tacatgcaat aggatttcga ttatgattaa atttggaatt cagcaggggt tgaacgttgc
     5521 aagacttgga ctgaccgagg accaaatctt aaccgttgcc atgcttgcag acaaaacagg
     5581 atatgactct atttggtaca tggatcacag caacgtgccc caatggaatc atgccatagt
     5641 aaatgaccca tgggttatgc tttctgcaat tgcttcagta acacaaaaac ttgaacttgg
     5701 aacttgtgta acagacgcag tcagacgaca tccatcaaat atcgcattag caactattac
     5761 tcttgacaga gtctcacatg gtagaggaac tcttggaatt ggtgcaggcg aggcacaaaa
     5821 tatcaaagag tttaagatat tatgggacaa accagtagga agatttgaag aacagcttca
     5881 agtaattaaa ttactttttg gctcatcacc tgaaaaaaga gtcagcttca aaggagagtt
     5941 ttatgagctt gacaatgcat gcttgcaagc aaagccaata agaaaaccgc atcctccaat
     6001 ttacatggca gcgggagcac caagaactct tgcactctgc ggcaaatatg gagatggttg
     6061 gattccgata ggatacactc ctgaacttta tgaagaacac gtcaaggcaa taaaacaatc
     6121 catgaaggaa aatggcagag atggttctga ctttcagttt gcagtagaca ttgatgttta
     6181 ctttgctgat gatgcagaag tagcatgggc caagatgaaa aatgctgtaa aggttagtct
     6241 gttcaagccc gaggttctca aagttcacaa tattaaagac attgcaggtt ttgattttaa
     6301 gaaatacttt accgaatatt caatgtcaaa tcaagaatgg atagtcaaga tgagggaagc
     6361 tgcacagaca attcccgata atgtggctcg ctcctcaatt ggaattggta ctccagatga
     6421 tatcattcca gtatttgaga aatttatcaa ggcaggagtc aatcacttta ttgtcagatt
     6481 ctggggatca ggatactttg gatctataga caagtttggc tcaaccgtac taccttactt
     6541 taaggaccaa aacaacccaa gacgataata atttctagag atatctaaaa atcgtcattc
     6601 tagacgagtt aggtatgtcc gagactagag caaaattata caacggatat gattttttgt
     6661 attgtttcat aaaactccat gccacatcat gagtcttgaa atcatttcga ataccatcaa
     6721 tctttgtttc ttgcccaaat acgtcaaaga ctttgatgaa atattgtgcg ggctttttgt
     6781 gtggctttgc cctgaggagc cacgaaatcg caaatacaaa aactgcaaac ataatcagcg
     6841 cagccccaat ctctttaaga taatcccagc aaaaggatgg aattgtatca ccaaacaaat
     6901 gatagacaaa gcttgaaaat gtggcaaccg atgtgcctat caaagcaaac gccctaatgt
     6961 tagcctcgat ttcatccagt ttcagcatat tagacagtac acctgccccc atttaaccat
     7021 taaaaccata tacaaaaata ttcaacctaa ataatctaga gatgtgcagc tattaggaag
     7081 actagagatc aaatcaaagg aaaaaatggt tgagtttcta aacaaacaag aagctggacg
     7141 catttgcagt attgacaaag acggataccc acagataatt ccaatgaatt ttgtttatgc
     7201 aaaagatgcc atttacatgc attctcatat aaaaggagaa aaattagaaa acattgcaag
     7261 aaatcagaaa gtaggatttg aggtagatca aagtttggaa ttcttgccat catattttac
     7321 ccatccaact gatgcgtcac aagctgatac actatacatc agtgttgtaa tcaagggaac
     7381 tggaagtata gtgacagaca gaaaagagaa gacttttgct ctaaatgcac taatggaaaa
     7441 atatcagcca gaaggaggat atgaaaaact cttgccagat ctggaagtta ttgacgccgt
     7501 agcaatcatc aaggttgtcc ctataacaat gcgtggcaaa tacaaaatag gacaacatct
     7561 agaaaaaaga tcaagactgg agcttgccag attaattctt aagagaaatt cctcctctgc
     7621 aaaaaatact gtaaagacaa tgggaataat agagacaaag gatggccttt ttgtatcaga
     7681 agaacccaat tggtagcact acaatagtcc aatgcaaaca ttaggtcaga acgctaaaga
     7741 tctcaaggta tttgttagga attcaacaaa atactatagt ttgcttcaaa atccaacctt
     7801 tgaactagtc tcagactttg tccctacagg tgatcagcct caagcaatag agatgttaac
     7861 tgaggggata agaaagaaaa aaatacaaac tttacttggt gtcacaggaa gcggtaaaac
     7921 cttcactatt gcaaatacca tcaaaaaaac aggcaaaaat acactggtaa tctcacacaa
     7981 caaaaccctt gctgcgcagc tatattctga acttaaacag ttcttcccaa aaaacaatgt
     8041 aggatatttt gttagctatt atgattatta tcaaccagaa agttacattg cacagactga
     8101 cacatacata gaaaaagaca ctgcgataaa cgagaagata gaaagaatgc gtcttgaagc
     8161 aacagccatg ctgctatcag gagaacctac agtcattgtt gcaacagttt cgtgcatata
     8221 ttcactagga tcaccacgcg aatgggaaga gatggcaatt ataattgaga agggaaaaaa
     8281 gattgggaga aattcattaa tcaagaaact cgttaatgca cgatatgaca gaaatgatac
     8341 cgaacttgtt cctggtagat ttagaatcaa aggcgataca atagacatca taccagcata
     8401 ttcggatgca gtagtacgaa tatccatgtt tggtgatgac gtggaaaaga tatctatttg
     8461 tgatcccgtt tctctcaaag agaaaaaaca aatttcccaa atcaagatat ttcctgcaaa
     8521 gcattatctt gtagcttcag atgtacgaaa aaaagcagtt gaatcaataa aaaatgaact
     8581 caaagaaaga ctttcgcaac tccgtgagct tgaaagacag agactagaga tgaggacaaa
     8641 atatgatttg gaaatgattg aagagcttgg atactgctct ggaattgaaa actattcaag
     8701 gcattttgat ggaagacacc caggggaacc gccgttttgt ctgcttgatt tttttggtga
     8761 cgacttttta cttgtcatag atgaatctca tgtaacatta ccacaattac atggaatgca
     8821 taatggagat catacacgta aaaaatctct catagattat ggatttaggc ttccaagcgc
     8881 ttttgataac agaccattaa aatttgaaga atttgaaaaa tacgtaaaaa atacaatatt
     8941 tgtatctgca acacctggag aatatgaacg aaagaagagc tttcagatag cagaacagct
     9001 aatcagaccg acaggtcttg tagaccctac cgtagaagtg cgaaagactg agaatcaaat
     9061 ggacgatctt gtttctgaaa ttcaaaaacg tgtagacaaa aatcagcggg ttctggttac
     9121 cacacttaca aaaagaatgg cagaagatct agcagaatat ctcccaaaac gtcaagttaa
     9181 ggtaagatac ttacattctg agatagaaaa ccttcaaaga actgagatta tcagacagtt
     9241 gagattagga gaatttgatg tactagtagg aattaacctt ctaagagagg gcctcgatat
     9301 tccagaagtt tcccttgtcg caatccttga tgcagataag gaagggtttc ttagaaataa
     9361 caccagttta atccaaactt ttggcagagc cgcaagaaac tcagatggtg ccgtcataat
     9421 gtacgcagac acattaacac aatcaatgaa gctagccatg cttgaaacag aaagaagaag
     9481 aaagaaacag tttgaatata ataaaaagat gggaattact ccaacaacca ttgtcaaggc
     9541 aatacctcaa caaacgattg aacttgatga ggtaaaacac atgtcacgcc atgatctgca
     9601 aacatttgcc attgaattag aagctaccat gaagaaatac gcagaagaac ttgactttga
     9661 gcgcgccatt gaatcccgtg acaagcttac aaagatacaa aaagaattgg caaaatgaac
     9721 gacaaattga tcattcgtgg tgcaaggcat cacaacttaa aaaacatcaa tgtagatata
     9781 ccaaaaaaca agtcagtagt aattactggg ctttctggtt ccggaaaatc aacacttgcc
     9841 tttgatacca tctatgcaga aggacaaaga agatatgttg aatcactttc tgcatacgcc
     9901 agacagtttt tggagatgat ggataaacct gatgttgatt ctatcgaagg cctctctcct
     9961 gcaatctcaa ttcaacaaaa gaccacgagt aaaaacccca gatcaacagt tgggactata
    10021 acagagattt atgattatct gcgtttgctt tatgcaagaa ttggcatccc acattgtcca
    10081 agatgtggaa gaaaaatatc aaatcaatcg gtagaatcca tttgcgaatc aattctcaag
    10141 gaatcagaag gaaaaaagat tttaatttta gcgccattga ttcgcagaaa aaaaggaaca
    10201 tatgaaaaat tatttgaaca agtaaagaaa tcaggatatt ccagaatcag aatagacgga
    10261 gatattgtgg aactaaatgg tgaagctcca actcttgaca aacaaaaatg gcacaatatc
    10321 gagattgtgg tagataggct caaggcatca tgggaagaaa aaagcaggct ctttgaatca
    10381 atccaaactg caacaaaagc tggaaagggt actgtcatga ttttaaatgg agaagagaga
    10441 gtcttctcac aaagtaatgc ttgtccacac tgtggaatta ctgtaggaga gcttgagcca
    10501 agaacctttt cgtttaactc tccatttggg gcgtgtaaaa cttgtcacgg gctaggtgtg
    10561 aagatggagt ttgacccaga acttttgatt ccagacaaga ctagatccat tcttgatgga
    10621 gcaataattc cgtggtcagg tagattctcg tcatttagaa gacagactct gcgtgatgtt
    10681 ggaaagaaat ttggttttga tctaatgaca cctataaaca aaatgacgcc aaaacaacta
    10741 agtgtgattt tatacggcac ccaagagctg gtccgatttt catatgaggc tcaaactaca
    10801 gactcgcgtt ggcaatatac taatactttt agtggcgtaa ttccaagtct ccagaaaaat
    10861 tttgcagaaa cagattctga atcaaaaaga gaagaactag ccaaattcat gcgagagaca
    10921 ccgtgtacca catgcaaagg attgagacta aaagacgagg cgctatcggt tttgataaat
    10981 tccatgtcga ttatgaatgt ctgcgacctt tcaattgatt catgctatga atttttccac
    11041 aatcttcaac taacagacac tgagaaatac attgcaaaat cagttctaaa agagatctta
    11101 tcaagactag aatttctaaa aaatgttgga ctgaactatc ttacactgaa tagagtaagt
    11161 gcgacattat ctggaggcga atcacaaaga ataaggctgg ccactcagat tgggtcaaat
    11221 ctaacagggg tactctatgt cctcgatgaa cccaccattg gtctgcatca aagagacaat
    11281 gcaaaattaa tcaagacact ggtcaagcta cgagatcttg gaaatacaat acttgtagtc
    11341 gagcatgatg aagaagtcat gcgaaactca gactggatac ttgatttggg cccaggcgca
    11401 ggagttcatg gtggtaatgt agtatacaca ggtacgattg atggcatctt aaagaataga
    11461 gaatctcgta ctggtctgta tcttcgtaac cataatgcaa taaaactaat taaaaaaacc
    11521 cgcaaccaaa aaggcaaact agtcgtaaaa ggggctgcag aaaacaatct caaaaacatc
    11581 gatgtggaat ttcccctagg tttaatgatt gcagtaactg gcgtttctgg ttctggaaaa
    11641 tctactctag taaatgacat attattcaaa gcacttgcag cacactttta caattcagtt
    11701 gataggccag gaaaacacaa agcaattttg ggccaagatg acttggataa ggttatagga
    11761 atagaccaat ctccaatagg aagaactcct cgctcaaacc ctgcaacata cataggcgct
    11821 tttactccca ttcgtgagtt atttgcaagt acagaattat caaaagagcg agggtacacg
    11881 cctggacagt tctcattcaa tgtagcagac ggtagatgtt ttgcatgcga aggagatggc
    11941 gtaaaaaaaa tagagatgca gtttttgtcc gatgtgtatg tagtatgcga tgaatgcaag
    12001 ggaaaaagat acaactctga aacattatca gtgctataca aaagcaaaaa catctcagat
    12061 attctttcca tgacagttga tgaagcactg gaatttttta caaatattcc ttcaattcaa
    12121 cgaaaacttc aaaccatagc agatgttggt cttggataca tcaagttagg gcaacctgca
    12181 actacacttt caggtggaga agcacaacgt gtcaagctgg catcggaatt atcaaagcgt
    12241 gacacgggac aaactgtcta catattagat gaacctacca cgggtctgca ttttgcagat
    12301 gtagagaaac tattagaggt actaaacagg ttg
//
LOCUS       DASPUS010000092         2486 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_47319, whole genome shotgun sequence.
ACCESSION   DASPUS010000092 DASPUS010000000
VERSION     DASPUS010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2486)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2486
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47319"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..921
                     /gene="cofG"
                     /locus_tag="VEJ68_02045"
     CDS             <1..921
                     /gene="cofG"
                     /locus_tag="VEJ68_02045"
                     /EC_number="4.3.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010194458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7,8-didemethyl-8-hydroxy-5-deazariboflavin
                     synthase CofG"
                     /protein_id="HXX05580.1"
                     /translation="QAKISMLTRQEIENLATMGKKHKCTEALFVTGEKPEQRYQEAKA
                     WLKENGFRTTTEYIIHASETALRLGLFPHTNAGNLTKSEMNELKKTNVSLGLMLENSS
                     ERLAEKNMPHEFAPSKNPKVRIHILENAGELSIPMTTGILIGIGETPFELIDSIYTIK
                     ELNKRYGHIQEIILQNFQPKFDTKMRNSPRPSEKYFRTIIALTRIIMPEMNIQIPPNL
                     SPNSYSDYLSAGINDWGGISPVTPDFVNPEYSWPTIENVRNNCLKAGFELRARFPIYP
                     EFFSMMHQDLQSKVLELSDSNGLVREEYMN"
     gene            918..2183
                     /gene="cofH"
                     /locus_tag="VEJ68_02050"
     CDS             918..2183
                     /gene="cofH"
                     /locus_tag="VEJ68_02050"
                     /EC_number="2.5.1.147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010194456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(D-ribitylamino)uracil--L-tyrosine
                     4-hydroxyphenyl transferase CofH"
                     /protein_id="HXX05581.1"
                     /translation="MKIQTSLFDSLLRQAEPLIAETLERALSEKEITVIEATRLFEAK
                     GIDFHLIGMVADELRRRRVGDVVSYVVNRNINFTNVCIKQCGFCAFSRDFREEEGYFL
                     PLEEITRRAKEAQILGATEVCVQAGLPPDMDGETYEKICRAIKNEIGDIHIHGFSPEE
                     VLYGANRSNLSIQEYLLRLKSAGVNSIPGTAAEILDQTLRDKISPGRISVKKWIEIIK
                     TAHKLGIPSTSTMMFGHLETPEDRAKHIAIIRDIQKETGGFTEFVPLNFIHTEAPMYR
                     ENLHDGLRNGADGRDVLLTHAVSRIMLNNYINNIQMSWVKEGPNFAQLLLCWGANDFG
                     GTLINESISTAAGAKHGQILKPKEIRQLIKNIGRIPAQRTTFYKIIKFFNEEQDEGML
                     DKIDDFSQFGSYQELIKLDKYRFKNKRRN"
     gene            2186..>2486
                     /locus_tag="VEJ68_02055"
     CDS             2186..>2486
                     /locus_tag="VEJ68_02055"
                     /inference="COORDINATES: protein motif:HMM:NF013673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase modulator"
                     /protein_id="HXX05582.1"
                     /translation="MSVCEQVLREAKGLHVDECEVVAIHKKIITVRITDSEIAEIKQN
                     REQSLAVRIIHEKRILSVRMNDFSTGNILDKILQTKNYVKPKMFWKSLPHPSTFTK"
BASE COUNT          896 a          441 c          498 g          651 t
ORIGIN      
        1 caagcaaaaa tttcaatgtt gacaagacag gaaatagaaa accttgcaac tatgggaaag
       61 aaacacaaat gtactgaagc cttgtttgtt accggtgaaa aacccgaaca gagatatcaa
      121 gaagccaagg catggctaaa agaaaacggt tttcgaacta caacggaata catcatacat
      181 gcttctgaga ctgctttgcg cctaggttta ttcccacata caaatgcagg aaatcttaca
      241 aaatctgaaa tgaatgagtt aaagaagaca aatgtaagtc taggattaat gcttgaaaat
      301 tcaagcgaga gattagctga aaaaaatatg ccacatgaat ttgcaccaag caagaatcca
      361 aaagtaagaa ttcacatatt agagaatgca ggagaactgt ctattcccat gactactgga
      421 attcttattg gtattggtga gactccattt gaattgattg actcgattta taccataaag
      481 gagcttaaca aaagatatgg tcacattcaa gaaattattt tgcaaaattt tcaacccaag
      541 tttgatacaa aaatgcgtaa ttctccaaga ccaagtgaga aatatttcag aactataatt
      601 gcactgacaa gaataattat gccagaaatg aacatccaga ttccgccaaa tctatctccg
      661 aattcatatt ctgattatct ttcagccgga ataaatgatt ggggtggaat atctccagtg
      721 actccggact ttgtcaatcc agaatattct tggcctacta ttgaaaacgt tagaaataat
      781 tgtttaaagg cgggctttga gttaagagct aggtttccaa tatatccaga attcttttct
      841 atgatgcatc aagatctaca atccaaggta ttggaactct cagattccaa cggattggta
      901 agagaggagt acatgaattg aagattcaaa cttctctctt tgattcatta ctaagacaag
      961 ctgagccctt gattgcagag actctagaaa gggcattatc tgagaaagaa attaccgtaa
     1021 tagaagcaac gcggttgttt gaggctaaag gaatagattt tcatctcatt ggcatggtcg
     1081 cagacgaact acgtaggaga cgtgtcggag atgttgttag ttacgtagta aataggaaca
     1141 tcaattttac caatgtctgc attaaacaat gcggcttttg cgcatttagc agagattttc
     1201 gtgaagagga aggatatttt ttgcctctgg aagagataac acggagagca aaagaggcac
     1261 aaattctggg agccacagag gtatgcgttc aagctggtct tcccccagac atggatggag
     1321 aaacatacga gaaaatttgt cgagctatca aaaatgaaat tggcgatatt cacattcatg
     1381 gtttttcacc tgaagaggtt ctctatggag caaatagatc aaatctttcc attcaggaat
     1441 acctcttgcg attaaagagt gccggagtta actccatccc aggtactgca gctgaaattt
     1501 tggaccagac tttgcgcgat aaaatttccc ctggcagaat cagtgtcaaa aaatggattg
     1561 agataataaa gaccgctcac aagttgggca ttccttccac atctacaatg atgtttggac
     1621 accttgaaac tccagaggat agagcaaaac acattgcaat tatcagagac atacaaaaag
     1681 aaacaggcgg ttttacagaa tttgtgccac taaacttcat ccatactgag gctccgatgt
     1741 acagagaaaa cttgcatgac ggattaagaa atggtgcgga cggaagagat gttttgttaa
     1801 ctcatgctgt ttcgcgcatt atgttaaaca attacatcaa caacattcag atgtcatggg
     1861 taaaggaggg accaaatttt gcacaacttc tgctttgttg gggagcaaat gattttggtg
     1921 gaactctcat caatgagagc atctcgacag cagcaggagc aaaacatgga cagatactca
     1981 agcctaaaga aataagacaa ctaataaaaa acataggaag gattcctgcc caaagaacaa
     2041 cattctacaa aataatcaag ttcttcaatg aggaacaaga tgaaggaatg cttgataaaa
     2101 tagacgattt ttcccaattt gggtcgtatc aagaattaat caaattagat aagtatagat
     2161 tcaaaaacaa aaggcgaaat tagcgttgtc cgtttgtgaa caggttcttc gcgaagccaa
     2221 gggcttgcat gttgacgaat gtgaagtagt agccattcat aaaaaaataa ttaccgtgag
     2281 aattaccgac tcggaaatag cagaaataaa acaaaacaga gagcaatccc ttgcagtacg
     2341 cataattcat gaaaaaagga ttttgtctgt tagaatgaac gattttagta cgggaaatat
     2401 cctagacaaa atattacaaa ccaagaacta tgtaaaacca aaaatgtttt ggaagtcatt
     2461 accacatcca tcaacattta caaaat
//
LOCUS       DASPUS010000093         3058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_596874, whole genome shotgun sequence.
ACCESSION   DASPUS010000093 DASPUS010000000
VERSION     DASPUS010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3058)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3058
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_596874"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..387
                     /locus_tag="VEJ68_02060"
     CDS             <1..387
                     /locus_tag="VEJ68_02060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="5,10-methenyltetrahydrofolate synthetase"
                     /protein_id="HXX05583.1"
                     /translation="SEVVKQFNEQGFNKKIDLYLSIPSNPDFEKIHKKIEAQPKGFVT
                     QVVSSIDQVTKIVDRLKPQGFKIIPCILLSSELNEKSAKMLNLDWSNYGKDLVGFIKE
                     VNKIAGNVLLSSPNDFKKALEILKKF"
     gene            complement(390..1466)
                     /locus_tag="VEJ68_02065"
     CDS             complement(390..1466)
                     /locus_tag="VEJ68_02065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HXX05584.1"
                     /translation="MNPIAKFGIAAAIIAIVIVLSLDSSFFTTPSESHTLTESSNVTK
                     TDTIRIGYFPNISHAQAVIGLGNGDYQKELGSIKIETQVFNAGPSAIEALFANRVDVT
                     YVGPNPAINGYLKSDGQGLRVIAGAASGGAVFVVRNDDGINSVNDLGGKKFASPQLGN
                     TQDVALRSYLLKNGYKTSDNGGTVQVIPASNPDIFTMMLKKNIDGAWVPEPWGTKLEK
                     EANGTILVDERDLWPNGKFVSALIVVRTDYLQNHPDIIKKLLEAHVDETTWINNNKDD
                     AIAAFNVQLVKLTGKSLPADELKEAFSRMDLTYDPVKDSLYTSADNAFNLGFLGKQKP
                     DLTNIFDLKILNEVLQEKNLSTIP"
     gene            complement(1550..2536)
                     /locus_tag="VEJ68_02070"
     CDS             complement(1550..2536)
                     /locus_tag="VEJ68_02070"
                     /EC_number="4.4.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphosulfolactate synthase"
                     /protein_id="HXX05585.1"
                     /translation="MLDDLVKNRVDSKKPRKEGLTYVVDRLENYNKENWELISAFVDV
                     VKINGALALLASESNLIKKINFYHDLGIRVSTGIISTEYAIAQNSFERYIKDAKKMGF
                     DVVEIAENIVDLNMERKKKINDTITSLDLEAQWKVGKRDPRHQLGIEDTLVKIEELVS
                     LGSTKVIMEANQGFGVGIYDENGNVKWGNVAILTNKYPPSTFIFEAPQETQQFALIAE
                     FGERVNMSEVSVDSIISVESERRGILSKSAFTTVNVRDEPEGGPASKFIYYIIKTKFP
                     IEQSDLINLSYLPRRTVQSAIEELKNQGLIIERTSLNDARKRVYYPIRSEWL"
     gene            complement(2557..3051)
                     /locus_tag="VEJ68_02075"
     CDS             complement(2557..3051)
                     /locus_tag="VEJ68_02075"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HXX05586.1"
                     /translation="MNSFSAGLLSFPSIAWVPFSILLIGFNEFGILFVVIMSSVFSVM
                     ISTYSSIRNIPTIYLDAARNMGARGFGLFRYVTLPAATPSLIIGLRQAWSFAWHAIIG
                     AEILMSIVGLGHILSVGRDFLDMSEVIASMITIFAIGLIVDRFLLNKIEERIRKKWGL
                     DHHR"
BASE COUNT          916 a          600 c          498 g         1044 t
ORIGIN      
        1 agtgaagttg tcaagcaatt caacgagcag ggatttaaca aaaagattga tctttatctc
       61 tcaattccct ccaatccaga ttttgaaaaa attcacaaaa aaattgaagc gcaaccaaaa
      121 gggtttgtta cccaagttgt cagttccatt gatcaagtga caaaaatagt agacagattg
      181 aaacctcagg gtttcaagat tattccgtgc atattgttgt catctgaact caatgaaaaa
      241 tctgcaaaga tgctcaatct tgattggtca aactatggca aggatcttgt tggatttata
      301 aaagaagtca acaagattgc gggcaatgta ttgttaagct cacccaatga tttcaaaaaa
      361 gcacttgaga ttctaaagaa attctaaatt caaggtattg tagacagatt tttttcttga
      421 agtacctcat ttagtatttt aagatcaaag atgttagtca aatcaggttt ttgttttcca
      481 agaaatccca aattgaaagc attatcagct gaggtataga gtgagtcttt tacaggatca
      541 tatgtcaagt ccatccttga aaaggcctct tttagttcgt cagcaggaag tgacttgcct
      601 gtaagtttaa cgagttgaac gttgaaagca gctattgcat cgtctttatt gttattaatc
      661 caggtagttt cgtctacatg agcttctaac aattttttga ttatatcagg gtgattttgt
      721 aaatagtctg tccgtaccac tatgagagca ctgacaaatt ttccgtttgg ccacaagtct
      781 ctttcatcta ctaagatcgt tccgtttgct tccttctcta gtttagtacc ccaaggttct
      841 ggcacccagg ctccgtcaat gtttttcttt aacatcatag taaaaatatc aggattggaa
      901 gcaggaatta cttgaacggt tccaccgtta tcagatgttt tgtatccgtt ttttaacaaa
      961 tatgatctta gtgctacatc ttgtgtgtta cctagttgag gtgatgcaaa ttttttccca
     1021 cccagatcat ttaccgaatt tatgccatca tcgtttctta ccacaaaaac agctccgcca
     1081 cttgctgcac ctgcaattac tctcaatcct tgtccatctg attttagata tccgttaatt
     1141 gcagggtttg gaccaacata tgttacatca accctatttg caaaaagcgc ctctatagca
     1201 gatggtcctg cgttgaatac ttgggtttca atcttaatac ttccaagttc cttttgataa
     1261 tcaccattac ccagtcctat tactgcttgt gcgtgcgata tatttggaaa atatcctatg
     1321 cgtatagtgt cagtctttgt cacgttagag ctttctgtga gcgtatggga ttctgatggt
     1381 gtagtaaaaa atgaagaatc taaacttaag actatgacta ttgctattat tgcagctgca
     1441 attccaaatt ttgctatcgg attcatttta caaacacgtt tgaatctgtt ctaatataac
     1501 cgattcaaat atgcaaatta ttagttgcta gtttattttt caaatctagt tacagccatt
     1561 cggaccgaat aggatagtaa actcgttttc tggcatcatt tagactggtt ctttctatta
     1621 taagaccttg atttttgagt tcttcaattg cactttgtac agttcttcta ggaagataac
     1681 ttaagttgat caagtcactt tgttctatcg gaaactttgt cttaattata taataaatga
     1741 attttgaagc tggtcctcct tctggttcgt cacgtacatt tacagttgta aaagctgatt
     1801 ttgataatat tccccgtcgt tctgattcga cagaaataat tgaatctaca gagacttcag
     1861 acatgttgac tctctcacca aattctgcta tcaatgcaaa ttgttgagtt tcttgtggag
     1921 cttcaaagat gaatgtgctt ggaggatact tgttggtaag aattgccaca tttccccatt
     1981 tcacattccc gttctcatcg tagataccaa ctccaaatcc ctgattggct tccattatca
     2041 cttttgtaga ccccaaactt accaactcct ctatcttgac caatgtatct tcaataccta
     2101 actgatgtcg tggatctctt ttaccaactt tccattgagc ttcaagatct aatgatgtta
     2161 ttgtatcgtt gattttcttt tttctttcca tattcaaatc tacaatgttt tctgcaatct
     2221 cgactacatc aaaccccatt tttttagcgt ctttgatata tcgttcaaat gaattttgtg
     2281 caattgcata ttcagtactt atgattccag tcgaaacacg gattccaaga tcatggtaaa
     2341 aattaatttt tttgattaaa tttgactctg atgctaacag tgctaatgca ccattaatct
     2401 ttacaacatc tacaaatgca gatattaatt cccagttttc tttgttatag ttttctagtc
     2461 tatcaacaac ataagttaat ccctcttttc gtggtttttt agaatcaacc ctatttttta
     2521 caagatcatc aagcaattac ctaaacacca attcaatcaa cggtgatgat ctaatcccca
     2581 ttttttgcga attctctcct caatcttgtt taacagaaat ctgtcaacga ttaagcctat
     2641 tgcaaaaatt gtgatcatac tggcaatgac ttcactcata tcaagaaagt ctctaccaac
     2701 agaaagaatg tgacccagtc ctacaattga cattaggatc tcagctccga taatagcatg
     2761 ccaagcaaaa gaccaagctt gtcttaatcc aattatcagt gatggagttg cagcaggtag
     2821 tgtaacatac ctaaatagtc caaatcctct tgcacccatg tttcttgcgg catcaagata
     2881 gattgtagga atatttctaa tactgctata agttgagatc atgacagaga aaactgagct
     2941 cattataaca acaaacagga taccaaattc attaaatcca atcaagagaa tcgagaaagg
     3001 cacccatgca atacttggaa atgataagag tcctgctgag aatgaattca gtgttttt
//
LOCUS       DASPUS010000094         2171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1827566, whole genome shotgun sequence.
ACCESSION   DASPUS010000094 DASPUS010000000
VERSION     DASPUS010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2171)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1827566"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            235..1539
                     /locus_tag="VEJ68_02080"
     CDS             235..1539
                     /locus_tag="VEJ68_02080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011033147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HXX05587.1"
                     /translation="MVTVNSTFNNFSEVPILIDLLGQFSNDYEYTTKGVFRRKTPPIC
                     PVCNNSMVHNGYNLYTKQGLGEVIIGKYKCSHCGNTQEETRSFWEDLKTLLLDSFNDF
                     FQLLRYHNVSYDGISAIMDFIYPRSKSTILREFNKQMDQEIIPNLENVRIVHYDEQHP
                     KEGRCQKYRLTLLDAITQRSLADELFDDKSSETIKKFLQENLDTSEPVFIVTDFDPRY
                     PEILKEVFGEKLVHQYCLMHLDKLIVSDFSRNTTIEQELLKYRLLNIFYNRETEIQFL
                     EKLRSEELNVIKNEKEYKDWIKIAKKDFYKLLNKLKLQRRRNKENLSFHSLDKSKSNF
                     EELMIQIRTYEEVIQKRLRMINKHWLNLTLFHYLPVAPATNNPIESYYSKSLKTDRKK
                     QFRTDWGIENQIKLTEMKRSNLFQKPEKSLIELFKLFTPFKF"
     gene            complement(1754..>2171)
                     /locus_tag="VEJ68_02085"
     CDS             complement(1754..>2171)
                     /locus_tag="VEJ68_02085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011021263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HXX05588.1"
                     /translation="CRDLKLIGNKIWIWDRRFFKCNCSGLKKKETEMLSDPDAGHYVK
                     KTGKYSVLSGTGYTDTCIVDSWFGLPIYWDAVNASKNDNTIFQETVNQCTKSTSEKPL
                     FLIADAGPDSHPSNEAVIEKGIIPIIAARANSDSIP"
BASE COUNT          804 a          335 c          366 g          666 t
ORIGIN      
        1 ccgatctgag gaactaaatg taattaaaaa cgagaaagag tacaaagatt ggattaagat
       61 cgcaaaaaaa gatttttata agcttttaca caaattaaag ctacaaagaa gacgaaataa
      121 agagaatctt tcatttcata ggactcagtc ccaaagtcta gtgatagaag tagtgtaaca
      181 tcactacata agatttataa ttttgcaaat atgtaatgat gttacggcga aacaatggta
      241 actgtaaatt caacctttaa taacttttct gaagtaccta ttctcataga ccttttaggt
      301 caatttagca acgattatga atacactaca aaaggagttt ttcgaagaaa aactcctccg
      361 atatgtcctg tatgcaataa ttctatggtc cataatggtt acaatctata caccaaacaa
      421 ggtcttggag aagtcattat tggtaaatac aaatgttcac attgtggaaa tacacaggaa
      481 gaaacccgaa gtttttggga ggatctgaag actttacttt tagactcgtt caatgatttt
      541 ttccaattac tcagatatca caatgtttcc tatgatggaa tttctgctat aatggacttt
      601 atatatccaa gatcaaaaag taccatttta agagaattca acaaacaaat ggatcaagag
      661 attattccaa atttagagaa tgtacgtata gtacactatg acgaacagca tccaaaggaa
      721 ggacgttgtc agaaataccg tttgacttta ctagatgcaa taactcaacg atcactagcg
      781 gatgaacttt ttgatgataa aagttcggaa accatcaaaa aattcctaca agaaaatctc
      841 gatacatcag aacctgtgtt tatagttacg gactttgatc caagatatcc agaaatatta
      901 aaagaagttt ttggagaaaa attagttcat caatattgtc tgatgcatct tgacaagctt
      961 atagtaagtg atttctcaag gaatacgacc attgaacagg agctattgaa atacagattg
     1021 ttaaatatat tttacaatcg tgaaactgag atacaattct tggaaaagct cagatctgag
     1081 gaactaaatg taattaaaaa cgagaaagag tacaaagatt ggattaagat cgcaaaaaaa
     1141 gatttttata agcttttaaa caaattaaag ctacaaagaa gacgaaataa agagaatctt
     1201 tcatttcata gccttgataa atcaaagagc aactttgaag aattaatgat tcaaatcaga
     1261 acatatgaag aagtaattca aaaacggctg aggatgatta ataaacactg gttgaatctt
     1321 actttgtttc attatctacc agttgctcca gcgacaaata atcctattga aagttattat
     1381 tcaaaaagtc taaaaactga tagaaagaag cagtttagga cggattgggg aattgagaat
     1441 cagattaaac ttactgaaat gaaaagatca aatttgttcc agaaaccgga aaagtcactt
     1501 atagagttgt tcaaattatt tactccattt aagttttagt gagtaaatta gtagaaatat
     1561 cattaatcta gtagcgaagc gtatcgattt ttgtctataa ctgaagtgaa aaaaatcaag
     1621 tatgtaacaa tatgtaacaa attctttggc tttacttcaa aagaacgtgt ttcacaagga
     1681 tcttttgagt ttatttagat agtcaatagt gaaaattgcg gttttgagaa ggaaaaaaac
     1741 gaaaatcact agattacgga attgagtcac tattagctct tgcagctata attggaataa
     1801 tccctttttc gattacagct tcatttgagg gatgactgtc tggaccagca tcagctatca
     1861 gaaaaagtgg tttttctgat gttgattttg tgcactggtt tactgtttcc tgaaaaatag
     1921 tgttgtcatt tttgctagcg ttgactgcat cccaataaat aggtagccca aaccaactat
     1981 caacaataca tgtatcagtg tatcctgttc ccgataatac actgtattta ccagttttct
     2041 tgacgtagtg tccagcatca ggatcagaaa gcatttctgt ttcttttttc ttcaaaccac
     2101 tgcaattaca tttaaaaaat cttcgatccc aaatccagat tttgttgccg ataagcttaa
     2161 gatctctaca t
//
LOCUS       DASPUS010000095         2181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_876507, whole genome shotgun sequence.
ACCESSION   DASPUS010000095 DASPUS010000000
VERSION     DASPUS010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_876507"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..707)
                     /gene="aroD"
                     /locus_tag="VEJ68_02090"
     CDS             complement(30..707)
                     /gene="aroD"
                     /locus_tag="VEJ68_02090"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HXX05589.1"
                     /translation="MTDKTCVSIGASSPAKLKSDLKKALNKSDYVELRLDFLDPSQIP
                     NLLNSIKKQLQRCICTLRPKSEGGKFSGTEKERISILKLIAEFDPYLLDVEYNTLKNK
                     ELYKFLKASKVNLLVSWHDFSKTPSKDCLKNMAKKMARFSKNIKIVTTARTIDDTLRI
                     LALYRLKSTSTRLIAFAMGDYGRMSRIICTRLGSPFTYVSLGKPIAPGQFSLDEMQSI
                     FSLKKHN"
     gene            complement(731..1039)
                     /locus_tag="VEJ68_02095"
     CDS             complement(731..1039)
                     /locus_tag="VEJ68_02095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05590.1"
                     /translation="MVNQKLHIGLIAVALSSIVVLAVALPAANALTPRNFQYFNDNHV
                     TATYQGGGPYVCGDKVCSADEWSKMKQDLRAAQRDPTSCAQLKSWVSCGTPVNTKSGQ
                     "
     gene            1186..1479
                     /locus_tag="VEJ68_02100"
     CDS             1186..1479
                     /locus_tag="VEJ68_02100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HXX05591.1"
                     /translation="MSTETSAAKDTVFIGKKPLMAYVTSALIQLANRPKVSIKARGLS
                     IGRAVDVAQIIVRRTDNSGYSIGEIKIGSENLQSMDGRARNVSTIEIEVKKNA"
     gene            1625..>2181
                     /locus_tag="VEJ68_02105"
     CDS             1625..>2181
                     /locus_tag="VEJ68_02105"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HXX05592.1"
                     /translation="MVGDSRDLTSIGKNKVALTVTSPPYHNAINYNEHQTSQKWYRGT
                     VGISVESWLEEMKDVFSQVYHVTKPGGYCCIVIGNELVEGRVKLPLPAMLLIELTKNN
                     IGWKFFEEIIWNKVTGGKKRFRVTVQHPYPTYYYPNIMHEQIIILRKPPFYNIKDKKS
                     KIVVNGVMKKEVANSVWHIAPVPPS"
BASE COUNT          684 a          380 c          431 g          686 t
ORIGIN      
        1 ttaatgcaac ggtatgtcaa ggacgatttt taattgtgtt tttttaggct gaagatggac
       61 tgcatttcat caagactaaa ttgaccaggt gctattggct ttccaagaga aacataggtg
      121 aatgggcttc caagtcttgt acagattatt cttgacatcc ttccataatc gcccatcgca
      181 aatgcaatca atcttgtaga ggttgatttc agtctataca acgcaagaat tcttagagtg
      241 tcatcaattg ttctagctgt tgtaactatc ttgatatttt ttgaaaatct tgccatcttc
      301 tttgccatgt ttttcaagca atctttgctt ggggtttttg aaaagtcatg ccatgataca
      361 agtagattga ctttactggc cttaagaaat ttgtacaatt ctttattttt caaagtattg
      421 tattccacat cgagaaggta tggatcaaat tctgctatca gttttaaaat tgagattctt
      481 tccttctcag ttcctgaaaa ctttcctcct tctgactttg gcctaagagt acagatgcat
      541 ctttgcaatt gttttttaat tgaatttaac aaatttggaa tttgagaagg atctaaaaaa
      601 tctaatctca actctacata atctgattta ttgagtgcct ttttcaaatc actcttcagt
      661 tttgcagggc tagatgctcc aatcgatacg caggttttat cggtcattgc aataacttgt
      721 tgttattttt ttattgacct gacttggtat tgacaggtgt tccgcaagat acccaactct
      781 tcaattgtgc gcaagatgtt ggatctcgtt gtgctgctcg caagtcctgt ttcatctttg
      841 accactcatc tgctgagcat accttgtcgc cgcagacata tggtccgccg ccttggtatg
      901 ttgctgtgac atggttgtcg ttaaagtatt ggaagtttct tggggtcaat gcatttgcag
      961 ctggtaaagc tacagcaagg accactatgg atgacaatgc tactgcaatc aatccaatgt
     1021 gtagtttttg atttaccatc gaggagcagt acattacact agtatattta cattagcata
     1081 caattatcaa tgataagtgg atctaaaatt atcgagttat actagtaatt ccatgcgtga
     1141 gtttcaagga aacttttatg aaacgatcat acgttcagga aagtcatgag cacggagact
     1201 tcagcagcaa aagacacagt attcatcggg aaaaagccat tgatggcata tgtgacatct
     1261 gcactcatcc aacttgcaaa tcgtccaaaa gtatcgataa aagcaagagg acttagcatc
     1321 ggcagagcgg tagatgttgc acaaataatt gtgcgaagaa ccgataattc aggatactct
     1381 ataggggaga taaaaattgg ttccgagaat cttcagtcaa tggacggtag agctaggaac
     1441 gtgtcaacta tagaaatcga agtaaagaaa aacgcatagc acggcctaaa acatgtttta
     1501 aaacatgttt tagtcacttt tcttttaatt ttcattcatt tgattagata atgatctgga
     1561 cagagcttac aaataataaa catcaaaata ctttaggata gtaatgtgga aaacaaattc
     1621 tattgtggtt ggtgactcga gagatcttac aagtattggc aagaataaag ttgcattgac
     1681 agtgacctcg ccaccatatc ataatgcaat aaactacaac gaacatcaaa ctagtcaaaa
     1741 atggtatcgt gggacagttg gaatctccgt tgagagttgg cttgaagaga tgaaggatgt
     1801 attttcgcag gtttatcacg taaccaagcc gggaggatac tgttgtattg taattggaaa
     1861 cgaactagtt gaaggaagag tgaagcttcc attgcctgct atgttactta tagaattgac
     1921 caagaataat ataggatgga aattttttga agaaataatt tggaataagg taacgggtgg
     1981 aaaaaaacga tttagagtta ctgtgcaaca tccgtatccc acttactact atcctaatat
     2041 catgcatgaa cagataatca tactaagaaa acctccgttt tacaacatca aagacaaaaa
     2101 aagtaaaatt gtggtcaatg gcgtgatgaa aaaagaagtg gcaaattctg tttggcatat
     2161 agctccagtt cctcctagct a
//
LOCUS       DASPUS010000096         2881 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1694338, whole genome shotgun sequence.
ACCESSION   DASPUS010000096 DASPUS010000000
VERSION     DASPUS010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2881)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2881
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1694338"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..525
                     /locus_tag="VEJ68_02110"
     CDS             133..525
                     /locus_tag="VEJ68_02110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05593.1"
                     /translation="MGHPSVTNMWDYLHSKRILDMYNQSLDMINSPFAFPRLPPRANP
                     PLGLSNTGKIKDAIVNDKNAMMGKLFGYHEMFQLYASGLFNLSHNGYIPGHPLNTKVQ
                     TVDSLQEENNRLRKENATFKNEKTKEKK"
     gene            651..1043
                     /locus_tag="VEJ68_02115"
     CDS             651..1043
                     /locus_tag="VEJ68_02115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05594.1"
                     /translation="MQKTPNQKWNEEIAHYRKKCQQIMTISSSIRYVGLVNPYGRTLT
                     GVIKPGTSILLKSDAARNEFFLVSTLFNMRNKISSSIGNMEYAILKHNKITLIVFQSK
                     EGIYYISISKSMTADSIANLISKIKKIV"
     gene            complement(1040..1447)
                     /locus_tag="VEJ68_02120"
     CDS             complement(1040..1447)
                     /locus_tag="VEJ68_02120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HXX05595.1"
                     /translation="MQIKHLGSVIIAVSNLEKSTKFYHEIIGLPVKNTRENWVELGRD
                     VGTVILHPATKPIITGTSLENGIVIGLVVGDIASAVQELKSKGVTIYRDVTSHKAGKN
                     CIALDPDKYMISLFEPSSEGAQQARGFHGFAPV"
     gene            complement(1484..1684)
                     /locus_tag="VEJ68_02125"
     CDS             complement(1484..1684)
                     /locus_tag="VEJ68_02125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HXX05596.1"
                     /translation="MVKSPKKLIAARLRMVKSVYDSFAVSGQFDAVALIDVKELSAIK
                     DVTTEIQNIKGVERTETLVQVV"
     gene            complement(1687..1935)
                     /locus_tag="VEJ68_02130"
     CDS             complement(1687..1935)
                     /locus_tag="VEJ68_02130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05597.1"
                     /translation="MRALCLITVKAGKVDNVVKTLQGIRKIVKEVMVVTGRADIAVVL
                     QGTMDEINNMVIDFKKIKEIVSTETLIEVEVDLGWSKP"
     gene            complement(2001..2231)
                     /locus_tag="VEJ68_02135"
     CDS             complement(2001..2231)
                     /locus_tag="VEJ68_02135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05598.1"
                     /translation="MAKVKKDSKKPSKKEAKKKDTTKAKGKEKSKLKQDVVEEDTGII
                     VVEDDSEMDKEAELEARKAYLEEARSQEASDD"
     gene            2429..2803
                     /locus_tag="VEJ68_02140"
     CDS             2429..2803
                     /locus_tag="VEJ68_02140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05599.1"
                     /translation="MYKFQKYVVIVLGTISIVGVFGIPLGDPKFIVQALVLEGCFIAL
                     TILSIQNYSKACIPNFIIAGIVIIGNSAFYKHIEIMTTLHPIYNAIILITGGYILQVL
                     LLITNTLAYKRQKQLPMDKNSS"
BASE COUNT          928 a          549 c          456 g          948 t
ORIGIN      
        1 tgttttttgc atcaatttga tctcgatcta gccattctat aaggatctgc gatcaaagca
       61 atttgataaa aaatgactag tacttgacat aattgattat ctaatgaata aattcgtacg
      121 taaacatgaa atatgggcca cccaagtgtt accaatatgt gggattattt acacagtaaa
      181 agaatactgg atatgtacaa tcagtcatta gatatgataa attccccatt tgcatttcca
      241 cgactcccac ctagggcaaa tcctccactt ggtttgtcaa atactgggaa aataaaggat
      301 gcaattgtta atgataaaaa tgcaatgatg ggaaagttat ttggatatca tgaaatgttt
      361 cagctttatg cttctggtct gtttaatctt tcacacaatg gatacattcc aggacatcca
      421 ttgaacacga aagtacagac tgtagatagc ctacaagaag aaaataacag attaagaaaa
      481 gaaaacgcta ccttcaagaa tgaaaaaacc aaagaaaaga aatagtctta caaactaaaa
      541 tcgtaaaata tcatttcatt aacagtgtag tacctgttca atactttaat cacactaaac
      601 ttgctaaaaa acagcccaaa cttataaagg cacaattcct tatctttttc atgcaaaaaa
      661 caccaaacca gaaatggaac gaagaaatcg cccattacag aaagaagtgt caacagatca
      721 tgacgatttc atcatcaata agatatgtcg gattagtaaa tccatatgga agaacactta
      781 ctggagtcat aaaacctggt acaagtattc ttttaaaatc tgatgctgct agaaatgagt
      841 tctttttggt ttcaacattg ttcaatatga gaaacaagat tagttcttca attggaaata
      901 tggagtatgc catattgaaa cataataaaa ttactttgat agtttttcaa agtaaagaag
      961 gtatttacta tatttctata agtaaaagta tgactgcaga cagtattgca aatcttatat
     1021 caaaaattaa gaaaatagtc tagacgggtg caaacccatg aaagcctcgt gcttgttgag
     1081 caccttcaga agatggctca aacaatgaaa tcatgtactt gtctggatca agtgctatac
     1141 agttttttcc agccttgtgc gatgttacat ctcgatatat tgtaacacct tttgatttga
     1201 gttcttgtac agcagaggct atatctccaa caaccagtcc aattacaata ccattttcaa
     1261 gagatgttcc agtaataatc ggttttgtag caggatgaag tattaccgtt cctacatctc
     1321 tgcccaattc tacccagttt tccctcgtgt ttttaacagg cagaccaatt atctcatgat
     1381 aaaattttgt agatttctct aggtttgata cagcaataat tacgcttcca aggtgcttta
     1441 tttgcatatt gagtgtaaaa actccaatgt taaaaccgtt atgctatacg acttggacaa
     1501 gggtttcagt cctttctacg ccttttatat tctgaatctc agtcgttaca tcttttatcg
     1561 cagatagctc ttttacatcg attaatgcaa cagcatcgaa ttgaccactt acagcaaagg
     1621 agtcataaac agattttacc atacgtagcc ttgctgctat aagcttcttg ggggatttta
     1681 ccaatactac ggctttgacc agcccaaatc aacctccact tcaatcaggg tttcggtaga
     1741 aacaatctct tttatcttct taaagtcaat taccatgttg ttaatttcat ccattgtgcc
     1801 ctgcaagacc actgcaatat ctgccctacc tgtgacaacc attacttctt ttacaatctt
     1861 tcttattcct tgaagagttt ttaccacatt atcgacttta cctgctttta ctgttataag
     1921 acaaagcgca cgcataaagg tttgatcgca ttgagacgga taagtgttat taatctagac
     1981 atggtagacg tggttgtaat ttaatcgtca ctagcttctt gtgatcgagc ttcttcaagg
     2041 tatgcctttc ttgcctcaag ttctgcctct ttatccatct cagagtcatc ctcaacgaca
     2101 attattccag tatcttcttc tacaacatct tgttttagct tacttttctc ttttcccttg
     2161 gcttttgtag tgtctttctt tttagcctct tttttcgatg gtttttttga atctttttta
     2221 actttggcca ttacgacgat taaccatcaa tgtgtctcat ccttttaaac ttgtcttaac
     2281 attatattaa aggcaaatca tatacttatg aatagtaata gctaatccat gcaacttttt
     2341 acaatatttg cctaatttct ttttctggtt cgctgcgatc tgaaaacaag aagtattttt
     2401 attaagaata attgaatttc aagaacaagt gtataagttc caaaaatacg tagtaatagt
     2461 tcttgggaca atttctatag tgggagtctt tggaatacct cttggagatc ctaaatttat
     2521 tgtacaagca ttagtactgg aaggatgttt tattgcactt acaatattat cgatacaaaa
     2581 ttacagcaaa gcatgcatcc caaatttcat catagcagga attgtcatta ttggaaacag
     2641 tgcgttttac aaacacatcg agataatgac tacattgcat ccaatttaca atgcaataat
     2701 actcatcacc ggtggatata ttctacaggt tttacttttg attactaata ctctagcgta
     2761 taaaagacaa aaacaattgc ccatggacaa aaactccagt taatttgcga ttttaaatta
     2821 aaattggtgc caccggcggg acttgaacgc gcgacagctc ggtcttcagc cgagtgctct
     2881 c
//
LOCUS       DASPUS010000097         3331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_457737, whole genome shotgun sequence.
ACCESSION   DASPUS010000097 DASPUS010000000
VERSION     DASPUS010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3331)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3331
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_457737"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..221
                     /locus_tag="VEJ68_02145"
     CDS             <1..221
                     /locus_tag="VEJ68_02145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HXX05600.1"
                     /translation="VSISDYEYELKNIRIDLFDNSAVATFTVKQTGMIVDNYSFRGQH
                     MSMESRGTFVLLKSTKWKIVHIHLSKIS"
     gene            complement(218..1096)
                     /gene="lsrF"
                     /locus_tag="VEJ68_02150"
     CDS             complement(218..1096)
                     /gene="lsrF"
                     /locus_tag="VEJ68_02150"
                     /EC_number="2.3.1.245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxy-5-phosphonooxypentane-2,4-dione
                     thiolase"
                     /protein_id="HXX05601.1"
                     /translation="MDWGLKNRLSRIIKSYDKRGVMLAVDHGYFLGPTERLEDPQKTI
                     APLLPHADSLMLTRGVLRTSVDANYPIPVVLRVSGGASIISKDLSNEKITTSIKDAIR
                     VNATALALSIFVGAPYEHESLVSLGNLVNEGEEYGIPILAVTAVGKELEKRDARYLGL
                     ACRIAAEFGAHLVKTYYCENFEKVVDSCPVPVIIAGGPKLATELDALKLTYDAIQAGA
                     AGVDMGRNIWQSDHPVAMIKAVKAIVHQNLTVKEAQELFIKLKTEPKSDKSTKPVKSI
                     KSSKTKSKATKAVSPA"
     gene            complement(1119..2162)
                     /locus_tag="VEJ68_02155"
     CDS             complement(1119..2162)
                     /locus_tag="VEJ68_02155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent dehydrogenase"
                     /protein_id="HXX05602.1"
                     /translation="MKSAYVKGPSNVEIHSVERPHVGSGDIVVQMRACGVCGSDLEKI
                     YGQYSQPSMRLGHEPSGVVSEVGTDIKEFKKGDRVFVHHHVPCYSCHFCLHGNETMCQ
                     KYSETNLNPCGLAEEFSVPAWNVAHGGVMKLPDNISFEEASMIEPLACCIRAWNKIKY
                     KSGDSVAVLGAGPTGMMHVMLSKIFDMKEIFCFDVNDFRLNFARQLGITESFHSTDSN
                     AYPKILSKTENRGVDVAIIATGNLNAFTQSIDLVRKGGTIMLFGVPSKDAKIFLDVSK
                     IYSKEITIIPSYAASENDTRSAFELIKEKKIDIKKLITHRFDLSESAKALEYAHQGND
                     SMKIIVTNSETLN"
     gene            complement(2227..2901)
                     /locus_tag="VEJ68_02160"
     CDS             complement(2227..2901)
                     /locus_tag="VEJ68_02160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05603.1"
                     /translation="MEKDKPILALIILSIFLICPYLKPIQADNANSVAILNPQVQPGI
                     VKVGTTFDINATLFNNSTDTINVKNGCGGSFSASFDNHAVVFLKKICNWMSIQIILKP
                     GENITATSLFSNLGYNATSVGVTNATITFSYFIVNQTNSNMPLNAQTMNVSKSFLFTI
                     TNQSSQTTIISSPLAQFKSGISANDVKCQNDLQLVIKAEDNSPACVTPDTASKLMARG
                     WAKTSS"
     gene            3053..>3331
                     /locus_tag="VEJ68_02165"
     CDS             3053..>3331
                     /locus_tag="VEJ68_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HXX05604.1"
                     /translation="MIMDLWHDIETGPKVPSIINVIVEIPKGSQNKYEYDKKNNIIKL
                     DRVLFSPLYYPGDYGIIPQTYAEDGDPLDALVLVTNPTYPGVLIEARPV"
BASE COUNT          956 a          600 c          592 g         1183 t
ORIGIN      
        1 ttgttagtat ctctgattat gaatatgaac ttaagaacat cagaattgac ttgtttgaca
       61 actctgcagt cgcgacattt actgtcaaac aaactggcat gatagttgat aactacagct
      121 ttagaggcca gcacatgtcg atggaaagta gaggaacgtt tgttctatta aaatctacaa
      181 aatggaaaat tgtacacatt cacttgtcta aaatatctta agcaggagat accgctttag
      241 ttgcttttga tttggtttta gaagatttaa tggattttac tggttttgta gatttgtctg
      301 attttggttc tgtttttagt ttgataaata attcttgagc ttctttgacc gttagattct
      361 gatgaactat tgctttgact gcttttatca tggcaacagg atgatctgat tgccagatgt
      421 ttcttcccat gtctactcct gcggcgcctg cttgaatcgc atcataagta agttttagtg
      481 catcaagttc agtggccagt ttcgggccgc ctgcaattat gacgggaacg gggcaagaat
      541 ccacaacttt ttcaaagttt tcgcagtagt atgtctttac taaatgtgca ccaaactcag
      601 ctgctattct gcatgcaagt cctagatatc ttgcatccct tttctctaat tcctttccta
      661 ctgcagtaac tgcaagtatt ggtattccat attcttcgcc ttcattaact aaattaccca
      721 aactaacaag tgattcatgt tcatatggtg caccaacgaa aatcgataat gcaagagctg
      781 ttgcatttac ccttattgca tctttaatcg atgtagtgat tttttcattt gagaggtctt
      841 tgcttatgat gctggctccg cctgaaactc ggagtactac aggtatggga taatttgcat
      901 ctactgatgt tctcaaaact ccacgagtta gcattaatga atcagcatga ggtaaaagtg
      961 gcgcgatagt tttttgtggg tcttccagtc tttctgtggg acctaaaaag taaccatgat
     1021 ctacagctaa catgacgcct cgtttatcat atgatttgat tattcttgaa agacgatttt
     1081 ttaatcccca gtccatatga ttcaccaaaa aatttgcctt agttaagcgt ttctgaattt
     1141 gttactatta tcttcataga atcatttccc tgatgagcgt attctagcgc ttttgcagat
     1201 tcggaaagat caaaacggtg tgtgatcaac tttttaatgt caattttttt ctcctttatg
     1261 agctcaaatg ccgatctggt gtcattttcc gaagctgcat aacttggtat tattgtaatt
     1321 tcttttgaat atattttact tacatccagg aaaatttttg cgtcttttga cgggacgcca
     1381 aataacatta ttgtgccgcc ttttcgtaca agatctattg attgagtaaa tgcatttaga
     1441 tttccagttg caattattgc cacatctact cccctgttct cggtttttga aagaattttt
     1501 gggtacgcat tagaatcagt agaatgaaaa gattcggtta ttcctaactg tcttgcaaag
     1561 tttaacctaa aatcgtttac atcaaaacaa aaaatttcct tcatgtcaaa aatcttgctt
     1621 agcataacat gcatcatgcc cgttggtcct gctcctaaaa cggctacaga gtctccactc
     1681 ttgtatttga tcttattcca tgctcttatg cagcaggcaa gtggctctat catggatgct
     1741 tcttcgaaac ttatgttatc aggcaatttc attactcctc catgggcaac attccatgca
     1801 ggaaccgaaa attcttcagc aagaccacat ggattcaaat tggtttctga atatttttga
     1861 cacattgttt cgtttccatg taaacaaaaa tgacatgaat aacaaggaac atgatgatga
     1921 acaaacactc tatcgccttt tttgaattct ttgatatccg ttccaacttc agataccact
     1981 cctgaaggtt catgacctaa tctcatggat ggctgactat attgaccgta aatcttctcc
     2041 aaatctgagc cgcatactcc acatgctctc atttgcacta ctatgtcgcc tgaacctaca
     2101 tgcggtctct ctacactgtg tatttctaca tttgatggcc cttttacgta tgcagatttc
     2161 atgttgtgat tttgaatatt tgcatatttg tattctctga ttttttaatt tgtgtatgtg
     2221 tgtaaattaa cttgaagttt ttgcccagcc tctagccatc aatttagatg cagtatctgg
     2281 cgttacacaa gctggagagt tgtcttctgc cttaattact agttgaagat cgttttgaca
     2341 ttttacatca tttgctgaaa ttcctgattt gaattgtgca agtggtgatg atatgatagt
     2401 tgtttgtgaa gattgatttg ttattgtaaa caagaatgac tttgaaacat tcatagtttg
     2461 agcatttaat ggcatgttgg aatttgtttg atttacaata aaatacgaaa aggttatggt
     2521 tgcatttgtc actccgacag atgttgcatt atatcccaga tttgaaaata agcttgttgc
     2581 tgttatgttt tcacctggtt ttagtattat ctgaatagac atccagttac aaattttttt
     2641 taggaatact acggcgtgat tgtcaaaaga tgctgaaaat gatccaccgc aaccattttt
     2701 tacatttatg gtgtcggtcg aattgttaaa cagtgttgcg tttatatcaa aagttgttcc
     2761 aactttaact atgcctggtt ggacctgtgg attcaaaatt gctacactat ttgcattgtc
     2821 tgcttgaatt ggtttaagat aagggcatat caaaaatatg ctcaatatta ttagagcaag
     2881 aatcggttta tctttctcca caaatttatc taaattaata ataatataag tgatctaggt
     2941 caattacttg attctgataa atagataatt gcaactttta atcatgaaca catttaatga
     3001 ttgactagat cattttatgt tccaaataaa ttaggctgat ttttcataaa tgataattat
     3061 ggatttatgg catgatatag aaactggacc taaagtacct tcaattatta atgtaatagt
     3121 ggaaattcca aaaggttctc aaaataaata tgaatatgat aaaaaaaaca acataataaa
     3181 attagataga gtactttttt caccacttta ttatcctgga gactatggga taatacccca
     3241 aacctatgct gaagatggag atcctctgga tgctctagtg ctggtgacta acccaacata
     3301 tccgggggta ttgatagagg ctcgtccggt t
//
LOCUS       DASPUS010000098         2139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1966636, whole genome shotgun sequence.
ACCESSION   DASPUS010000098 DASPUS010000000
VERSION     DASPUS010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2139)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2139
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1966636"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(54..1340)
                     /locus_tag="VEJ68_02170"
     CDS             complement(54..1340)
                     /locus_tag="VEJ68_02170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008300810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HXX05605.1"
                     /translation="MRALLDSFRWISKDGELLLIARILRTFAYGFLSIILSIYLKLLG
                     FDGFLIGLILTSTLINSVIFTLVTSFYADRIGRRKMLCIYASLMAISGIVFFVTSNYI
                     ALIAACLIGTINVTGTETGAFLSIEQSMLPQTVKDAKKRNTLFAFYNMVGTFAMSAGV
                     LVSGLPGIIQHQLGLSEIASITPLFLLYSILGVAVLSTYLLLSKKVELTERDDEETKD
                     LESDEKKKPRSKPLTQTLSPMSKKIVGKLSGLFAIDSFGGGFVIQSIVSLWFFTKFGA
                     DLTLLSYIFSIAGVLTAFSFLASAKIADRIGLINTMVFTHIPSNILLILVAFSPTLPI
                     AVALYLARMALSQMDVPTRQSYIVAVVKEDERTAAAGITNISRNISQAISPSIAGSIL
                     QSVSLLSAPFLLGGLIKIVYDAMLYLQFKRYDIKTN"
     gene            complement(1601..1990)
                     /locus_tag="VEJ68_02175"
     CDS             complement(1601..1990)
                     /locus_tag="VEJ68_02175"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002646072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-R-sulfoxide reductase"
                     /protein_id="HXX05606.1"
                     /translation="MNYNNLNSQEERVIVGKATEPPFSGEYDNFYEDGTFICRRCNAP
                     LFSSKSKFDARCGWPSFDETLPNAIKPIPDPDGIRTEIECINCGAHLGHEFLGEHLTN
                     KNTRECVNSLSIRFIPKGTELPKTINE"
BASE COUNT          684 a          411 c          364 g          680 t
ORIGIN      
        1 tccgacgtgt ccaaaataat agcgctacaa actaaatcac ttcatataat cacttaatta
       61 gttttaatgt cataccgctt aaactgcaag tacaacattg cgtcgtatac aatttttatt
      121 aatcccccca agagaaatgg agcagacaat aacgatacag attgcaatat tgaaccggct
      181 attgacgggg atatggcttg actgatattt ctagagatgt tagttattcc agcagctgca
      241 gtcctttcat cctctttaac aactgcaaca atatatgatt gtcttgtagg aacatccatt
      301 tgtgataaag ccattcttgc gagatagagc gctactgcta tcggaagagt aggagaaaat
      361 gcaacaagta ttaatagaat attagatggt atgtgggtga agaccattgt attgatcaaa
      421 cctattctat ctgcaatttt agctgaagca agaaatgaaa atgcagtaag aactcccgca
      481 atcgagaata tataagataa taaagtcaaa tctgctccaa attttgtaaa aaaccaaagt
      541 gatacaatgc tttgtataac aaagccgccg ccaaaagaat caatagcaaa aagaccggat
      601 aatttaccaa caattttttt tgacatagga gatagggttt gtgttaaagg ttttgatctt
      661 ggttttttct tttcatcact ttctaaatct tttgtctctt catcatctct ttctgttaat
      721 tctactttct tggataataa aagataagta gataaaacag ctactcctaa aatgctgtat
      781 agaagaaaga ggggtgtgat agatgcaatt tcgcttaacc ctaattggtg ttgaataatt
      841 cccggtaagc ctgaaactag aacgcctgcc gacatcgcaa atgttccgac catattgtaa
      901 aaggcaaaga gtgtatttct tttctttgca tccttcactg tttgaggcag catggattgt
      961 tctatagaaa gaaaagcccc tgtttcagtt ccagtaacat taattgtacc aattaaacag
     1021 gcagcaatta acgcaatata attagatgtc acaaaaaata cgatgcctga aatagccata
     1081 agtgaagcat atatgcatag cattttcctt ctgcctattc tatcagcata aaagcttgta
     1141 acaagcgtaa aaattacact atttattaat gtggaagtaa gtattagacc aattaaaaat
     1201 ccatcaaatc ctagtaattt tagatagatc gaaaggataa tactcagaaa cccataagca
     1261 aatgttctga gtattcgtgc aattaataac agctctccat cctttgaaat ccatcgaaat
     1321 gaatccagca atgctctcac tctatctcct agctacttca atcataactg ctgccaactt
     1381 gcctccaagg taatttttga aagcgtctcc gaatttaaaa tttaataaat cgaattggtt
     1441 ccctgttggc aaaaatattg atgcattaaa acgggcccta ttgtaccttg ttaggactac
     1501 taatgtactt tgaatactca aaagtgattt tacctgtacc gatagtacca tagtgacgcg
     1561 gcctccgagc tgtttttaca gtgttgtaat ttcagacacg ttattcattt attgtttttg
     1621 gtaactctgt tccctttggg ataaagcgta tagataacga atttacacat tcccgagtat
     1681 ttttatttgt caaatgttct ccaagaaatt catgtcccaa atgcgcacca cagtttatac
     1741 attctatttc tgttcttatt ccgtcaggat caggtatagg ctttatcgca ttcggcaagg
     1801 tttcatcaaa gctcggccat ccacatcgtg catcaaactt gctcttcgat gaaaagagag
     1861 gcgcattaca tcttctacag ataaatgttc cgtcttcata aaaattgtca tactcgccag
     1921 agaaaggagg ttccgtggct ttacctacaa tcactctttc ttcttgggag tttagattat
     1981 tgtagttcat agcataatca acaacaaaat tactacgagg caggtttgta tgccttgtcg
     2041 tagatctttt tttctattgg tacgatgttc atttgaatca tcgtggagag cgacaaattc
     2101 acattgagct tctaatctcg ccctttcata ttcactatg
//
LOCUS       DASPUS010000099         2558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_879885, whole genome shotgun sequence.
ACCESSION   DASPUS010000099 DASPUS010000000
VERSION     DASPUS010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2558)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2558
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_879885"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..456
                     /locus_tag="VEJ68_02180"
     CDS             <1..456
                     /locus_tag="VEJ68_02180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HXX05607.1"
                     /translation="LGDDAEKVSVGDTIELDDRTGIIRFIGSGRVQVDFNHRFAGRTI
                     LYDVNVIKSLDTDQDKIMGLLKRRFPLDESKLKFEIKGTELDVIIPEEAMMMEGLQVV
                     KRAIANEILKFVTKLEKINFIEAYNRAKPQEKPAEQKAVEAKPAQPKAA"
     gene            complement(458..1522)
                     /locus_tag="VEJ68_02185"
     CDS             complement(458..1522)
                     /locus_tag="VEJ68_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012216111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-1-phosphate dehydrogenase"
                     /protein_id="HXX05608.1"
                     /translation="MTRFEEKFMPSHVMELPRQIVVGEKNIGNIGSFLVGLSKPKKVS
                     LVSGEQVRKVTYNKVGKSLSKSKIKNIWHLSTSNDVDSVKKILSDIKKDKSDLIIGIG
                     GGRSVDIAKMIAFTLKKPFVSVPTSASHDGIASPFVSLRGDKPYSIIATAPLGVFVDV
                     EILKKAPRRLIASGCGDLMAKVTAVRDWELARDKVKEYFGTYAANLASMSAKIVIDNS
                     KNFKKKPDVRMIVEALISSGVAACIAGSSRPCSGAEHLFSHAVDYLEPGIGLHGEKCG
                     IGAILIAKLQGQDWKKIIKMLKNVGAPTTAKEIGLEPRILAKALSIAQSLRPERYTIL
                     SQVKMTEEKAIALAKSTGVL"
     gene            1604..2236
                     /locus_tag="VEJ68_02190"
     CDS             1604..2236
                     /locus_tag="VEJ68_02190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome subunit beta"
                     /protein_id="HXX05609.1"
                     /translation="MSDYIEQHTLHGTTTVGIQCTDGVVLCADMRASAGYFIANNNTM
                     KIQKIDFHAGMTMAGGVADAQNITDILRYHSNIHRMEKQEYMQIKSLARLASLVLFQN
                     RYYGVIADILVGGYDKNGPSLYNIDPFGSLDKKNYVTTGSGSPVAYGLLESEYRDNLT
                     VDEAKVVALRAVKGAITRNIGTGDGINVAIIDKQGFRLLTKEQKKAIITL"
     gene            2244..>2558
                     /locus_tag="VEJ68_02195"
     CDS             2244..>2558
                     /locus_tag="VEJ68_02195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-CASP ribonuclease aCPSF1"
                     /protein_id="HXX05610.1"
                     /translation="MQRNKQQREISPIPNVMGTILQSIPKEAEVTKIEYEGPRIAIYT
                     KNPRFLMEHNDVISNMVNVIKKRIVVRTEESIRKNEEEARQILTQMLPKDTDLRGTFF
                     DTA"
BASE COUNT          864 a          494 c          460 g          740 t
ORIGIN      
        1 ttaggcgatg atgcagagaa agtctctgtt ggagatacaa tcgagcttga tgacagaact
       61 ggaattatca gattcattgg ttctggacga gttcaagttg attttaatca tagatttgca
      121 ggaagaacaa tcctatatga tgtaaatgtc atcaaatcgc ttgatacaga tcaagacaag
      181 attatgggct tacttaagag aagatttcca ctagatgaat ctaaactcaa atttgagata
      241 aaaggaacag agcttgatgt tatcatccca gaagaagcca tgatgatgga aggacttcag
      301 gtagtaaaac gagcaattgc taatgagatc ttaaaatttg tgacaaaact tgaaaaaatt
      361 aatttcatcg aggcatacaa cagagcaaaa cctcaagaaa aaccagcaga acaaaaagcc
      421 gtagaggcca aacctgcaca gccaaaagct gcttaaacta tagtacacca gtactttttg
      481 ctaaagcaat agccttctct tctgtcattt ttacctgact tagaattgtg tatctttctg
      541 gacgtaaaga ttgagcaata gataatgctt ttgcaaggat tcttggctca agaccaattt
      601 cttttgcagt tgtaggcgca ccaacatttt ttagcatttt aattatcttt ttccaatcct
      661 gaccttgaag ttttgcaatc aagattgctc ctattccaca cttttcgcca tgcaatccaa
      721 tacctggttc gagataatct actgcatgag aaaacaaatg ctcagcacca gaacatggtc
      781 tactgctacc agcaatacac gctgcaacgc cggagcttat cagagcttct actatcattc
      841 taacatcggg tttcttttta aaattctttg aattatcgat gacaatcttg gcactcattg
      901 aagccaaatt tgctgcgtag gttccaaaat attcttttac cttatctctt gcaagttccc
      961 aatctcttac agctgttact ttggccatca aatcaccaca tccactagca attagtcttc
     1021 ttggggcttt ttttaaaatc tcgacatcta caaatactcc aagtggtgct gtcgctatga
     1081 ttgaataagg cttgtctcct cgtaatgaaa caaatgggct ggcaattcca tcatgtgatg
     1141 ctgaagttgg aacactaaca aatggttttt tcaaagtaaa ggcaatcatc tttgcaatat
     1201 ctacagaacg ccctccgccg attccaatta tcaaatcact tttgtctttt tttatatcag
     1261 aaagtatttt ttttacagaa tcaacatcat tactggtact aagatgccaa atgtttttta
     1321 ttttagattt ggaaagggac ttgcccacct tgttgtaagt aacctttctt acctgttctc
     1381 ctgaaacaag agaaactttt tttggttttg aaagacctac cagaaaactt cctatattgc
     1441 caatattttt ctctccaact actatctgtc ttggcagctc catgacatga gaaggcatga
     1501 atttttcttc aaacctcgtt atttatcgat atcctatgac aatacaaagt tatttaaacc
     1561 ggtgaaatcc taatcgaagt atctctagtt aggggaatgt tatttgtcag actatattga
     1621 acaacacaca ctacatggaa caactacagt cggaatccaa tgtaccgatg gagtagtctt
     1681 atgcgcagac atgagagcta gcgcaggcta ttttatagca aataacaaca cgatgaagat
     1741 ccaaaagata gattttcacg caggcatgac catggcaggt ggtgttgcag atgcacagaa
     1801 catcacagac attctacgat atcactccaa cattcacaga atggaaaaac aagagtatat
     1861 gcagatcaaa tcgcttgcaa gacttgcttc actagtactt ttccaaaata gatactatgg
     1921 agttattgct gatattcttg taggaggata tgacaagaat ggtccatctt tgtacaacat
     1981 tgatcccttt ggatctcttg acaagaaaaa ctatgtaact acaggaagtg gttcgcctgt
     2041 agcttatggt ctattggaaa gtgaatatcg tgataatctt actgtagacg aagctaaggt
     2101 agttgcttta agagctgtca aaggtgcaat aacaagaaac attggaacag gagacggaat
     2161 aaatgtcgca attattgaca aacaaggatt ccgactctta acaaaagaac agaagaaagc
     2221 cataattacg ttatagtgat ttaatgcaaa gaaacaagca acaacgagaa atatctccaa
     2281 tacccaatgt catgggaact atacttcaaa gtatcccaaa agaggcagag gtaactaaga
     2341 tagaatatga aggacctaga attgcaatat acacaaaaaa tcctcgtttt ctgatggaac
     2401 acaacgatgt aatctcaaac atggttaacg tcataaaaaa gagaatagtt gtcagaacag
     2461 aagaatccat tagaaaaaac gaggaagaag caagacagat tctaactcaa atgcttccaa
     2521 aagacaccga tttgcgtggt acattctttg atactgca
//
LOCUS       DASPUS010000100         2803 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_601479, whole genome shotgun sequence.
ACCESSION   DASPUS010000100 DASPUS010000000
VERSION     DASPUS010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2803)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2803
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_601479"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..380
                     /locus_tag="VEJ68_02200"
     CDS             <1..380
                     /locus_tag="VEJ68_02200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HXX05611.1"
                     /translation="QSGKEIKVGEKTVKPSDVMSEKRKGRRIGISGDTRPTKKLEEFF
                     QGCDYITFDSTYSDDLRDKAKENYHSTSVEAAELAKKAGVSNLILTHFSARYEDTEEM
                     LKEAKKVHDNVIAAKDLMEIEIK"
     gene            382..1095
                     /locus_tag="VEJ68_02205"
     CDS             382..1095
                     /locus_tag="VEJ68_02205"
                     /EC_number="2.3.1.286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0017136 - NAD-dependent histone
                     deacetylase activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacylase"
                     /protein_id="HXX05612.1"
                     /translation="MLEKIADKLKQSEKIIFVTGAGISQESGIPTFRGKDGLWRKYDP
                     MKLATIDAFYEDPKLVWEWYEERRKNILAAKPNAGHIAIAELEEKKPVRVLTQNIDGL
                     HQRAGSKNVYELHGSIITIKCTSCGFKDKISSSFSELPPLCKCGSILRPDVVWFGESL
                     PQDVWQAAISEASSCDTMIVVGTSLAVSPANLLPVYAKQNGAILVEVNPEETAMSDTM
                     DISIRSSAAKALPELVSLF"
     gene            complement(1280..1684)
                     /locus_tag="VEJ68_02210"
     CDS             complement(1280..1684)
                     /locus_tag="VEJ68_02210"
                     /inference="COORDINATES: protein motif:HMM:NF042555.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6659 family protein"
                     /protein_id="HXX05613.1"
                     /translation="MTQQIDSQSIENHLLGHGVEFAGYVNKQGRIVDYACKNEINLSQ
                     EQKDMFFMATTPSLRMQGDYDDHFGAVKYIVTERENSKIVSIPITSGAIVLVVNKDTN
                     LRMLVKKILKKIETTKKLKGDLQGPHIWTSIV"
     gene            1838..2680
                     /locus_tag="VEJ68_02215"
     CDS             1838..2680
                     /locus_tag="VEJ68_02215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05614.1"
                     /translation="MLREVWCQGSPVNMETRLEKLQSQKFLLISLIVTGISFLIAGSF
                     GKETAIVFGNWIFVLSAAPVILTAIMIKRKGIQGIHGKSWVCFLIFAVLWCIADQLFT
                     YNELYLHESPFPSSADVFYLAGYPFYLLFVLNYLKPFKNAISKKLLLSVSLIATVVLI
                     TNVYMTLQNNSPDETQTGVIVGLIYPIADAIILVPTIIGVTLFFRGMVNFLWTLLLIG
                     FICEVIGDTAFQYLSLSNDMYTGHPIDLLFLWTYILFSFGIYDHLKIFKSQKNSFDNK
                     EDLR"
BASE COUNT          869 a          522 c          553 g          859 t
ORIGIN      
        1 ttcagtctgg caaggagatc aaggtaggcg aaaagacagt aaaaccgtca gatgtaatga
       61 gtgagaaaag aaagggaaga aggataggaa tttcaggcga tacaaggcct acaaaaaaac
      121 tcgaagaatt ctttcaaggc tgtgattata tcacatttga ttcaacatac tctgatgatt
      181 tgcgtgacaa ggcaaaggag aactatcatt caacatcagt tgaagccgca gagcttgcaa
      241 aaaaggccgg agtctcaaac ctaatcctta cacacttttc agcaagatat gaagatacag
      301 aagaaatgct aaaggaagca aagaaagtcc atgataacgt aatagcagca aaggatctca
      361 tggagattga gatcaagtga catgctagaa aaaattgcag acaagctcaa acaatcagag
      421 aagataatct ttgttaccgg tgcaggaatc tcccaagagt ctggaattcc tacctttcgg
      481 ggaaaggacg gtttgtggag aaagtatgac cccatgaagc ttgcaacaat tgatgccttt
      541 tacgaagacc caaagcttgt ctgggagtgg tacgaggaaa gaagaaagaa catacttgct
      601 gcaaagccaa atgctggaca cattgcaata gcagagcttg aagagaagaa accagtccgt
      661 gtcctgacac aaaacattga tggcctgcac cagagggcag gaagcaaaaa tgtctacgag
      721 cttcatggca gtattattac tataaaatgc acttcatgtg gtttcaagga caagatatca
      781 tcaagcttct ctgagctccc gcccctgtgt aagtgcggaa gcattctacg gccagatgtt
      841 gtctggtttg gtgagtcgtt acctcaagat gtctggcagg ctgcaatctc tgaggcaagc
      901 tcctgtgata ccatgatagt ggttggaacc tctcttgcag tatcgcctgc aaatctatta
      961 ccggtttacg caaaacaaaa tggtgcaata ttagtagagg taaatccaga ggagactgca
     1021 atgtctgata ccatggatat ttccatcaga tcttctgcgg ctaaagcact tcctgagctt
     1081 gtctcacttt tttagtggta aaatatcatt ttataacttg gccccgacgt gtatgttgaa
     1141 aataatcaag aatgcattcc tcgtgagcat atctaaatgg ttcacacgaa gtctggcaaa
     1201 accaacaaat tcctttttga aatactggag atgaatagtt acctctaatg atttgaggtt
     1261 gcatctttta ctttagctcc tatactattg atgtccagat atgcggtcct tgcaaatcgc
     1321 cttttagttt ctttgtagtt tcgattttct tcaagatttt ttttacaagc atgcgaaggt
     1381 ttgtgtcctt attgacaact agaacgattg ctccactggt tataggtatg gaaacaatct
     1441 tggagttttc cctctctgtt acaatgtatt tgacggcacc aaaatgatca tcgtaatctc
     1501 cctgcattcg aagactcggt gtggttgcca tgaaaaacat gtccttttgt tcttgtgata
     1561 gattgatctc atttttgcac gcatagtcta ctatgcggcc ttgtttgttg acataacctg
     1621 caaactcaac tccatgccct aacaggtgat tttcaataga ctgcgagtct atttgttggg
     1681 tcatatcatc tcattgggta caacaattac gtaatggcac ctaataagat atttcatcac
     1741 taattccact catttactat tttagatcgc atatgaagaa ttgttataga actagaattt
     1801 gactagtaaa agaagaaaga tccaacgtta atttataatg ctaagagagg tttggtgtca
     1861 aggtagccca gtaaacatgg aaactcgtct agaaaaatta caatcacaga aatttctact
     1921 gatttcttta attgttaccg gaatatcatt tttaattgca ggatcatttg gcaaagagac
     1981 tgcaattgtc tttggtaact ggatttttgt gctatcagct gctcctgtca ttctaactgc
     2041 cataatgata aagagaaaag gaatacaagg aattcatgga aaatcatggg tttgttttct
     2101 aatatttgca gtactctggt gtattgcaga tcaactgttt acctacaacg agctctacct
     2161 acatgaaagc ccgtttccat caagtgcaga tgttttttat ctagccggat atccatttta
     2221 tctcttattt gtgctcaatt atctcaagcc atttaaaaat gccatctcaa aaaaactgct
     2281 gttatcggtt tcgttgattg ccacggttgt attgataaca aacgtgtaca tgactttaca
     2341 gaataattcg cctgatgaaa cccaaactgg agttattgta ggattaattt atccgatagc
     2401 ggacgcaatt attctagttc caacgattat tggagtgact ttgtttttta ggggcatggt
     2461 aaactttctc tggacgttat tactgattgg attcatctgt gaggtcatag gcgatactgc
     2521 ctttcagtat ctatctttgt ctaatgacat gtataccggt catcccattg acctactctt
     2581 cctatggacg tatatcctat tttcatttgg gatctatgat catctcaaga tcttcaaatc
     2641 acaaaaaaat tcttttgata ataaagaaga tcttcgatag gtctttttac aaaattttta
     2701 cttaagctaa ttattttgta tataatttta aatttaaaat aactaaatac taggtgtttc
     2761 cacaagtggt tatatctaaa aatttagcac aaaaagcact ggt
//
LOCUS       DASPUS010000101         6373 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_601487, whole genome shotgun sequence.
ACCESSION   DASPUS010000101 DASPUS010000000
VERSION     DASPUS010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 6373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6373)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6373
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_601487"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..509
                     /locus_tag="VEJ68_02220"
     CDS             <1..509
                     /locus_tag="VEJ68_02220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HXX05615.1"
                     /translation="CVGGGSNAIGTFYPLIDEDTEMFGIEAGGEGIKTGHHSATLAAG
                     KKGILHGMMTYLLQDKEGQIKDTHSISAGLDYPGVGPEHSYLKDKKRVTYDTVTDDEA
                     VQAFLALSKHEGIIPALESSHAVAYAIRLAKKLRQSETIVITLSGRGDKDVEVVEKYL
                     NQNVKNQR"
     gene            490..1290
                     /gene="trpA"
                     /locus_tag="VEJ68_02225"
     CDS             490..1290
                     /gene="trpA"
                     /locus_tag="VEJ68_02225"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HXX05616.1"
                     /translation="MSRIKDKFIELASKKQKGLIAYIMTGYPNDKSTMETIRGLVNGG
                     ADIIELGLPFSDPLADGPVIQNASFQSLKKGMNFTRFLSLVKKIRKETDIPLVLMTYS
                     NLPYARGYSKFLSEVKKAGIDGIILPDMAIEESRDYLNEIHKNNLDAIFLISPNTSKA
                     RIEKISKASSGFLYLVSVFGTTGAQVQFQKYTSDAIRNAKKIVGNKVPLAVGFGVSNP
                     DQAKVILRNGADAIIVGSAFLRLIEKTAPQQIESKVTAFTKSLKKATV"
     gene            1327..2934
                     /gene="pyrG"
                     /locus_tag="VEJ68_02230"
     CDS             1327..2934
                     /gene="pyrG"
                     /locus_tag="VEJ68_02230"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase (glutamine hydrolyzing)"
                     /protein_id="HXX05617.1"
                     /translation="MQTEETKYIFVTGGVMSGLGKGVVSSSIAKLLQLSNQKVSVVKI
                     DPYLNYDAGTMNPIAHGEVFVTEDGGECDMDIGNYERFLNQNIPRTHNITTAQIYSSV
                     IEAERRGEYLGACVQIIPHITDAIKDKIRKIAKSENLNVLVVECGGTVGDMESLPFLE
                     ALRQLRLEDGPNNVIFVHVTLAPSLDVVGEQKTKPTQHSVQELRRIGIQPDLIAVRCS
                     RPLETPAKKKISLFSNVSEKDVFSCHDAETILMVPQMLYDQGLVDVIFKKFGKVGLVN
                     TSANWDKWNTIVNSFEDKKEKIKIAMVGKYVKLADSYVSVNQALKHAGGKIGKNVIID
                     WIDSDDLNGHIDELSQYNGIIVPGGFGERGSEGIIKTANYAREKNIPYLGICFGFQLA
                     AVAFGRYVCGLTNANSTEINPNTENPVIDLLPEQKHIENKGGSLRLGSHEIKVEDNSL
                     AFKIYKSAILHKRHRHRYEFNQKYLEVFNSKGLKFSGYSDEKKRMEILEIPTHKFYLG
                     VQYHPEFSSRPGFPEESFDAFVKAASM"
     gene            complement(2935..3927)
                     /locus_tag="VEJ68_02235"
     CDS             complement(2935..3927)
                     /locus_tag="VEJ68_02235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016939398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HXX05618.1"
                     /translation="MKVAIFSQDQDQTVKSVKTTLATHGIESFSLTNKPIGNDVDYVI
                     VTGGDRGVRTFFHRFNNTIIPVLGINEFESSGYLAQTDLKEFSSYLNRLKKGNFSIEP
                     LSRVGVKIDGKNIYPALNDVAIFSSKSATLVEHVLRVNGEEFWHDSSDGLIVSTAIGS
                     SAYSMSAGGPAIYQGSKVFCIVSVNSLDITRRPLIVPEDSFIEIDDISSSLKCEVVMD
                     GKDRFNVDKIVECTKFPQPANIIRMKKDSTTASALAKKVKLADELLNMPPSSKLLLKT
                     LEYEGALTQKELASKTLLPDRTVRLALRHLLDKGYVKRRVSLRDTRQRIYEVPK"
     gene            complement(4226..5101)
                     /locus_tag="VEJ68_02240"
     CDS             complement(4226..5101)
                     /locus_tag="VEJ68_02240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HXX05619.1"
                     /translation="MKLAIFSHCTIDEISRNSHIVETAGGPASYCGITAKNMKFDIEL
                     HTKVGRDFKFSSDLENKNIFIPSNSVSDTPTTRFSLKIFGVERELYLKTKCDPIEFTK
                     SDADGAIVSPVYDEVSEDTLDKIRENFNFLLLDPQGYLRRIDKNNKVYLEKTLLDFSQ
                     LTAIKTDPDEAFYLTGLNEREAMMTLQKKGVKHVLYTNKQDITMLVKDRLYHLKIPNM
                     RIGDTTGIGDIFCAAFSCSYIKDNDSLWAICFAVGAAQAALETGATGLSKIPESGDIE
                     QNAAYLYNLVNFSHI"
     gene            5322..5609
                     /locus_tag="VEJ68_02245"
     CDS             5322..5609
                     /locus_tag="VEJ68_02245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S26e"
                     /protein_id="HXX05620.1"
                     /translation="MPLKRASRGRKKGGKGSSDRVQCSNCGATVPRDKAKKVTSRLNL
                     VEHSLAKELRAQGAYIASPTVLKYYCISCAIHFGILKIRSADSRRQTGRLR"
     gene            complement(5606..6178)
                     /locus_tag="VEJ68_02250"
     CDS             complement(5606..6178)
                     /locus_tag="VEJ68_02250"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HXX05621.1"
                     /translation="MLNHLRQALKPTLEKIGKAFSSTGLSANFWTVVGLGFAFVSAIV
                     YGIHLQYSFIIGGVLLLVSGFFDVVDGQVARITGKTSKKGAFLDSVFDKIAEVAIFLG
                     ILIGGYSHGYLVFLAITLSLLVSYTRARAESLGIPLQGIGIGERAERLLVIAIVGIAG
                     FLNYAVIVVIIIAGITFIQRIIATAKKISD"
BASE COUNT         2119 a         1145 c         1222 g         1887 t
ORIGIN      
        1 cttgtgttgg agggggatca aatgcgattg gaacatttta tcctcttata gatgaagaca
       61 cagaaatgtt cggaatagaa gctggcggtg aaggtatcaa gactggacac cattcagcaa
      121 cattagctgc aggaaaaaaa ggaatacttc atggcatgat gacctacctg cttcaagaca
      181 aggaaggcca gataaaagat actcatagta tatctgcagg attagattat cctggtgtgg
      241 gaccggaaca ttcgtatcta aaagataaaa aacgtgtaac ttatgatacc gtaactgatg
      301 atgaagcagt tcaagcattt ttagctcttt caaaacatga aggaatcata cctgcacttg
      361 aatcatcaca cgctgtagca tatgcaatta ggcttgcaaa gaagttgcga caaagtgaaa
      421 ctattgtgat aacattatca ggacgtggag acaaggatgt cgaagtggtg gagaagtacc
      481 tgaatcaaaa tgtcaagaat caaagataag ttcatcgagc ttgcatctaa gaagcagaaa
      541 ggcctcattg cctacatcat gacaggttat ccaaacgata agagtaccat ggagacaatt
      601 cgcgggcttg tcaatggagg cgcagacatt attgaacttg gattgccgtt ttcagatccg
      661 ctagcagatg gtccagtcat tcaaaacgca agttttcagt ccttgaaaaa aggtatgaat
      721 tttacaagat ttttatctct tgtcaagaaa atcaggaaag aaaccgacat accacttgtt
      781 cttatgacat attcaaatct accatatgct cgcggatatt caaaattctt gtcagaggta
      841 aaaaaggctg gaatcgacgg tattattcta ccagacatgg caattgaaga atctcgtgat
      901 tatcttaatg agatacacaa aaacaattta gatgcaatat ttttaatttc accaaataca
      961 tctaaggcca gaatagaaaa aatttctaaa gcatcatctg gctttctata tttagtatca
     1021 gtttttggaa ctacgggggc tcaagtacaa tttcaaaaat atacttctga tgccataaga
     1081 aacgccaaaa aaattgtcgg caataaagtt cccttggcag ttggttttgg tgtaagcaat
     1141 cccgatcaag ctaaagtcat tttgagaaat ggtgctgacg caataatcgt aggaagtgca
     1201 tttttacgac taattgaaaa gaccgcaccg cagcagatcg agtccaaagt aacagcattt
     1261 accaaaagtc tgaaaaaagc aaccgtgtag aacaagaaat aaaaatagca tttatccatc
     1321 atggatatgc agacagaaga aacaaagtat atttttgtaa caggcggtgt tatgtctggc
     1381 cttggaaaag gcgttgtatc gtcatctatt gcaaaactac tccaactttc aaaccaaaag
     1441 gtctctgttg taaaaattga tccctatcta aattatgatg caggaaccat gaatccaatt
     1501 gcacatggag aggtatttgt aacagaagat ggtggcgagt gcgacatgga tattgggaat
     1561 tatgagagat tcctcaatca gaacatacca aggactcata acattacaac ggctcagata
     1621 tactctagtg tgattgaggc agaaagacgc ggagagtatc ttggtgcctg tgttcagata
     1681 ataccgcaca ttaccgatgc tatcaaggat aaaattagaa aaattgcaaa gagtgaaaat
     1741 ttgaatgtac ttgttgtaga atgcggagga acggtaggcg atatggaaag tctcccattc
     1801 ctggaagcct taagacagtt aagattggaa gatggtccaa acaatgtcat ttttgtccat
     1861 gtgactcttg ctccctcact tgatgtggta ggagaacaga agaccaagcc gacccagcac
     1921 agtgtacaag agcttagaag gataggaatt caaccagact tgattgcggt caggtgttcg
     1981 aggcctcttg agacaccagc taaaaagaaa atttctctat tctcaaatgt ttctgaaaaa
     2041 gacgtatttt cgtgtcatga tgctgaaaca attctcatgg taccacagat gctatatgat
     2101 caaggattag ttgatgtaat cttcaaaaaa tttggtaaag ttggactagt aaatacctct
     2161 gcaaattggg acaaatggaa tacgattgtc aattcatttg aagacaagaa agaaaaaata
     2221 aagattgcca tggtaggaaa atatgttaaa cttgctgaca gttatgtgag cgtaaatcag
     2281 gcactcaaac atgcaggtgg aaagattggg aaaaatgtaa taattgattg gattgactcg
     2341 gatgatctta acggacatat tgatgaactc tctcaatata acggcataat tgtaccaggt
     2401 ggatttggtg aacgcggttc tgaaggaata ataaagacgg caaactatgc aagagaaaaa
     2461 aatataccat atcttggaat atgttttgga tttcagcttg cagctgtagc gtttggtcgt
     2521 tatgtttgcg gattaacaaa tgcaaactca acagagataa atccaaatac agaaaaccca
     2581 gtaattgatc ttttgccaga acagaaacat attgagaaca agggaggatc tctgagatta
     2641 ggatcacatg agattaaagt tgaagataat tctctcgcat ttaaaattta caagtctgcc
     2701 atactccaca agagacacag gcataggtac gaatttaatc aaaaatatct tgaagtattc
     2761 aattccaaag gactgaaatt ttcaggatac agcgatgaaa agaaacgcat ggagatatta
     2821 gagattccaa cgcataaatt ctatctagga gtacaatatc atccagaatt tagtagtaga
     2881 ccgggtttcc ctgaagagtc gtttgacgcg tttgtgaaag cagcatctat gtaatcattt
     2941 aggaacttcg tatattcgct gacgtgtatc acgtagtgat actcgacgct ttacatatcc
     3001 tttatcaagt agatgtcgca acgctagtct tacagttctg tctggcaaaa gggttttaga
     3061 cgccaattcc ttttgtgtaa gtgcaccctc atattctagt gtcttaagca acagttttga
     3121 gcttggtggc atgtttaaca attcatcagc aagttttact ttctttgcaa gtgcagaggc
     3181 cgtagtagag tcttttttca ttctaattat attagccggt tgtggaaatt ttgtgcactc
     3241 cacaatcttg tcaacattga atcggtcttt tccatccatc actacttcgc attttaaact
     3301 ggaagatata tcatcaattt caataaaact atcctctgga actatcagag gtcttcttgt
     3361 aatgtcaagt gagtttactg acacgataca aaagactttg gagccttgat aaattgcagg
     3421 gccaccagca gacatcgaat atgccgatga accaattgct gtggatacaa tcaaaccatc
     3481 actgctatca tgccagaact cttcaccatt tacacgcaaa acatgttcca ccaatgtagc
     3541 actcttggat gaaaagatcg caacatcgtt taatgctgga tagatgtttt taccatcaat
     3601 ctttacacct actctagaca gtggctctat ggaaaaattt ccttttttca atctattaag
     3661 ataagatgaa aattctttaa gatcagtttg agcaagatat ccacttgatt cgaattcatt
     3721 aattcctaaa actggtatga tggtattgtt aaaacgatga aaaaatgttc gtactcctcg
     3781 atctccacct gttactatga cataatcaac atcattacca attggtttgt tagtaagact
     3841 aaatgattca atgccatgag ttgcaagagt tgtcttaact gattttactg tctgatcctg
     3901 atcttggcta aaaattgcaa ctttcataga agagattcaa ttttcgtaca ataataaact
     3961 aacttaagtt taggtatgcc atgatacacg attaattgag atttttaata gaaaaagtaa
     4021 ttcttaaaaa cgatacttac tgataaaatg gagaaaccct ttaccaagta ataccaacca
     4081 gtggtactat gtgtgtctgg gaagggtttt ctccgggtat taaaatcatc attctcatat
     4141 ataatacaaa gtcacgtttt tattatttca agcaataata tcgttaaaat caaatgttgt
     4201 gatatgtaga atttttttgc ttttactaaa tgtgtgaaaa atttacaagg ttatacaaat
     4261 atgcggcatt ttgttcaata tcgccagatt caggaatttt agaaagacct gtggctcctg
     4321 tttcaagcgc agcctgtgca gcaccaactg caaaacaaat tgcccacaat gaatcattat
     4381 ctttaatgta cgaacacgaa aatgccgcgc aaaaaatatc acctatacca gtggtgtcac
     4441 ctattcgcat atttggaatc tttagatgat acagtctgtc cttgacaagc attgtgatat
     4501 cttgtttgtt tgtataaaga acatgtttga ctcctttctt ttgaagtgtc atcattgctt
     4561 ctctttcatt aagccctgtt agatagaatg cttcgtctgg atcagtcttt attgcagtta
     4621 attgtgagaa atcaagcaaa gttttttcca agtatacttt gttgttttta tcaatacgtc
     4681 gaagatatcc ttgtggatcc agtaaaagaa aattgaaatt ttctctaatc ttgtcaagtg
     4741 tgtcttctga cacttcatca tagacgggac ttacaatagc accatctgca tcagatttag
     4801 taaattcaat aggatcacat tttgttttca aataaagctc cctttcaacc ccaaaaattt
     4861 ttaatgaaaa tcttgtagtc ggagtatcag aaacagagtt gctgggaatg aagatattct
     4921 tgttttcaag atcagaacta aacttaaaat cacgacctac tttggtatgc aactcgatat
     4981 cgaatttcat attttttgca gtgattccac agtaagaggc aggaccacca gcagtctcta
     5041 ctatgtgaga atttctggat atttcgtcaa ttgtgcagtg ggaaaatatt gctaatttca
     5101 tcgattattc gcaggtatat ttcaatttag ttctttttct gctgtttttc aagacaggtt
     5161 ggacaaattg cctgtccttt tactattgtg atctcaacat ttgagcttag acatacgtgg
     5221 cataggcccc gcatgccctt tttttatgta aagtagttta aattcgtttt aaatggaact
     5281 agtgagatac aagatataaa gaggcagatt acagatagca tatgccacta aaacgcgcaa
     5341 gcaggggtag gaagaaggga ggaaaaggat cctcagatcg tgttcagtgt tctaattgtg
     5401 gcgccacagt tccgcgtgac aaggcaaaga aagtcacttc gagattaaac ttggtcgaac
     5461 atagcttggc aaaagaactc agagcacagg gtgcgtatat tgcatcaccg acagttttga
     5521 aatattattg catttcgtgc gcgattcact ttggcatatt gaagattaga tctgcagatt
     5581 ccagacgtca aactggaaga ctacgctagt cgcttatctt tttagcagta gcaataattc
     5641 tttgaataaa ggtaattcct gcaattatga ttactacaat tactgcgtaa tttagaaatc
     5701 ctgcaattcc aacgattgca attacaagta atctttctgc tctttcccct attccaattc
     5761 cttgcagtgg aatacccaat gattctgccc ttgctcttgt ataacttact aaaagtgaca
     5821 aggttattgc caaaaaaact agataaccat gcgagtatcc accaattaat attcctaaaa
     5881 atattgcaac ttctgcaatt ttatcaaata cagaatctag gaaagcccct ttttttgatg
     5941 tctttcctgt tatgcgtgcg acttgaccat ccacaacatc aaaaaatcca gaaacgagaa
     6001 gaagaactcc accaattata aacgaatatt gcaaatgtat tccgtagact atagctgaaa
     6061 caaatgcaaa tcctagacct accacagtcc aaaaatttgc agaaagacca gtagaggaaa
     6121 acgcctttcc tattttttca agagttggtt taagagcctg ccttaggtgg ttaagcatca
     6181 ataacagcca ttttttcaat aatttatacc attaataaca cgaatgagaa atcattctag
     6241 atgagactaa tattcaaata atgttgagta gaatagccga catgggtatt atagcaaaag
     6301 gtgccaaatg caatgtcata ggctgtgata aagatggcgt acgttcctta actacctcca
     6361 aagtagaagg tac
//
LOCUS       DASPUS010000102         2471 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1968745, whole genome shotgun sequence.
ACCESSION   DASPUS010000102 DASPUS010000000
VERSION     DASPUS010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2471)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2471
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1968745"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VEJ68_02255"
     CDS             complement(<1..524)
                     /locus_tag="VEJ68_02255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1802 family protein"
                     /protein_id="HXX05622.1"
                     /translation="MKALKEWATVVKALENGNQTVLLRKGGILETASGFNLEAKKFAL
                     FPTYEHQENASLKSPYYGYLADARENMPKNGYNRITSFAEVIEERDMTSMEKIEELSP
                     FHIWSDNYIVERMNWMPEKPMKAIFLKVYTISQIDIPVLPEYQGCKSWIELNVNAEAG
                     KPVLNEAELQQKLS"
     gene            complement(524..1195)
                     /locus_tag="VEJ68_02260"
     CDS             complement(524..1195)
                     /locus_tag="VEJ68_02260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chlorite dismutase family protein"
                     /protein_id="HXX05623.1"
                     /translation="MSEEPRYFFDFCFFQVDPKWRWMADLAKEESAKEVENILRNSQI
                     MYRSYSTLGLRDDTEFLLWFASESVEKIQDVISKLYLTVFGKYIIPTHIYLSSTRPSI
                     YTQGPRSHGWLGGEEQKKYVIVYPFIKTREWYLLPIEKRKEMMAEHIAVGKKYPEVKL
                     NTTYSFGIHDEDFMLAFETDDLHKFQDLIMDLRETRVSAHVRVDTPMLVCIKKDLIPL
                     IRSLG"
     gene            1540..2469
                     /locus_tag="VEJ68_02265"
     CDS             1540..2469
                     /locus_tag="VEJ68_02265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012216062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HXX05624.1"
                     /translation="MIKNFLNMKNRSVIIGYASALIASALFGSVPTIAKPVTANVNVL
                     LLSSLAYLIAALTFTPLAKGNKTSFTRRDYWLLIVVSVCGASLAPFLYFLGLSESTAS
                     DTSLLSNAEIVFTVLLALLFFKEKLKPVGFVAVGLVLFGVTIVTTNLQVSNSIFQINS
                     GHLLILASTALWSLDNNLSRILSTRMNTARLVQLKCAIGGAILLGMVFSLRIPFEIAT
                     SQISIIILLSALGFGGSLYFFLQSLKRIGTVRTVVLFSMSSVFGLIFAGLFLHEQISA
                     FQIIAIIIMLTGIYLINRKESMKEKPTPSSFGF"
BASE COUNT          690 a          464 c          449 g          868 t
ORIGIN      
        1 tctgataatt tttgttgaag ctctgcctca ttcaaaactg gttttccagc ttccgcattt
       61 acatttaatt ctatccaaga tttgcatcct tggtattcag gcaaaacggg tatatcgatt
      121 tgcgaaattg tgtagacctt aagaaatata gctttcattg gtttttctgg catccagttc
      181 atcctttcta caatgtagtt gtcgctccag atgtgaaatg gagagagttc ttctatcttt
      241 tccattgatg tcatatctct ctcctcaatt acttctgcaa aagaagttat tctgttatag
      301 ccattctttg gcatgttctc tcttgcatct gcaagatatc catagtatgg tgatttcagt
      361 gatgcatttt cttgatgttc gtatgtggga aacaaggcaa atttttttgc ttcaaggtta
      421 aagcctgatg ctgtttcaag aattcctccc tttcttagca aaactgtttg atttccgttc
      481 tcaagtgctt tgactacggt tgcccattcc tttagggcct tcattatccc aagctcctta
      541 tcaaagggat aaggtccttt tttatacata cgagcattgg tgtgtccact cttacatgag
      601 cactaacacg agtttctctc aaatccatta tcaagtcttg aaacttgtga agatcatctg
      661 tctcaaatgc aagcataaaa tcctcatcat gaattccaaa agagtaggtt gtgtttagtt
      721 taacctctgg atatttttta cccaccgcaa tgtgttctgc catcatctct tttctttttt
      781 caataggaag cagataccat tctcttgtct tgatgaaggg gtatacaatg acatattttt
      841 tttgttcttc tccaccaagc cacccatgac ttctaggtcc ttgagtgtaa attgacggtc
      901 ttgtgcttga caggtagatg tgtgttggaa ttatatattt gccaaagact gttaggtaga
      961 gttttgatat aacatcctga attttttcaa ccgattctga cgcaaaccaa agtaagaatt
     1021 ctgtatcgtc tcgtagacct aaggtggaat acgacctgta cattatctgg gagtttctaa
     1081 gaatattttc tacttctttt gcagactctt cttttgcaag atctgccatc caacgccatt
     1141 ttggatcaac ttgaaagaag cagaaatcaa agaaatatct gggctcttcg ctcatgccgt
     1201 cttagtttat ttcaacctta tttaaaatct ggctacaata ttcgcagaag atggcaaacc
     1261 tgttaatgtg ataaaacaat agaatcagta atatgccaat caaattgaga gtcgaacatg
     1321 aataggaaaa gagttttagc aatagtgctt ggttcaattt ttggcgcgtt tacaatcgca
     1381 attatcttta tagtgctagg cgctttttca tcataaaatc atggtccggt aggaacaact
     1441 tctgttgaga cggaataaac tttaggtcaa aacaaaatcg aaccattaat ctaacttgcg
     1501 tctacaaagg ctcaataatt gaagttacta atccattcca tgatcaaaaa ttttctcaat
     1561 atgaaaaata gatctgtaat aattggatat gcttctgcat taattgcatc tgcactcttt
     1621 ggttctgtgc ctacaattgc aaaaccagtc acagcaaacg tcaatgtttt gttactttcg
     1681 tcattggctt atcttattgc agcattgacg tttactccat tagcaaaagg aaacaagaca
     1741 tcttttacac gaagagatta ttggcttttg attgtcgtat cagtatgtgg tgctagcttg
     1801 gcgccttttc tttattttct aggactgagt gagagtacag catctgatac ttcgctttta
     1861 tcaaatgcag aaattgtgtt tactgtactt ctggcattgt tattctttaa ggaaaaatta
     1921 aagcctgttg gctttgttgc ggtaggactg gtcttgtttg gagtcacaat tgtcacaaca
     1981 aatcttcaag tttcaaattc tatatttcag ataaattctg ggcatttgtt aatcttggca
     2041 tccactgcat tatggtcttt ggataataat cttagtagaa tcctttcaac tagaatgaac
     2101 actgcaagac tagtccagct aaaatgtgct attgggggcg ccattctatt aggaatggtg
     2161 ttttctttga gaatcccgtt tgaaattgcc acatcacaga tatcaatcat aatcctgctc
     2221 agtgcattag gttttggtgg ttcgctttac tttttcctgc agagtctaaa aagaatagga
     2281 accgtaagga cagtggtatt attttccatg tcatcagtct ttggtttaat atttgcagga
     2341 ctattcttgc atgagcagat aagtgcattt cagattatag cgataataat catgctcact
     2401 ggtatctact tgataaacag aaaagagagt atgaaggaaa aacccacacc ctcaagtttt
     2461 ggtttttagt t
//
LOCUS       DASPUS010000103         3131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1153807, whole genome shotgun sequence.
ACCESSION   DASPUS010000103 DASPUS010000000
VERSION     DASPUS010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3131)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3131
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1153807"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VEJ68_02270"
     CDS             complement(<1..268)
                     /locus_tag="VEJ68_02270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HXX05625.1"
                     /translation="MSEKPKDGPDEQASTTNIVDMMLGGGKSGMLDSESLIKETQKRV
                     WSSLKKGYEYDYSVDESDKFLREHVSQRMHMIVLFVDLVGSTDMS"
     gene            488..1324
                     /locus_tag="VEJ68_02275"
     CDS             488..1324
                     /locus_tag="VEJ68_02275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05626.1"
                     /translation="MQIPSSSTDSFIKLLTEKGEKTQSLFLGQINALTKKVPLKVMLG
                     DGTVSDQESFDPTVVRQFYDNILRKLSSWTNQGVSVTADQDLRRSFIKFEIKEGNYLL
                     TCHMSLQYHAFLFYKPDHKVIQIQQELAEITDKIKDLQEKFKPEGDKLVEEVLKQKGY
                     ENMDHQKLFEVLFENDKITNDLSELLQTTELKINDLVTRRDSLFQELDKLLVEVYHTT
                     PILIDEMKMIAAEEGCLCNFNLEHVKNNSKEGNFDPTRISPKVREDLSKHMNDIIKVL
                     EC"
     gene            1620..2828
                     /gene="ilvA"
                     /locus_tag="VEJ68_02280"
     CDS             1620..2828
                     /gene="ilvA"
                     /locus_tag="VEJ68_02280"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - L-threonine ammonia-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0006549 - isoleucine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HXX05627.1"
                     /translation="MNLSYEDIIKSQKIQGKVIRRTPLELSRTFSKMTGCEVHLKSEC
                     LQKTGSFKVRGAYAKIATLSPEEKKKGVIAASAGNHAQGVAFASSLEKIPCTIVMPVT
                     ASPAKVAATRSYGANVILAGTIYDESWSKAVELSHKKGSQIIHAFDDEAVIAAQGVIG
                     LEILQDLPNVDEIYVPIGGGGLAAGILRAVKTRKPHVKVIGVQSSAFPSMKKSVDAGK
                     LETVRGQRTIADGISVKKPGEFTFKIINELIDDIVLVDDSQIVKAMFLLMERSKMVVE
                     PSGAVSLAYLLDKKPVKGKKVVPILSGGNVDMYLLGQIVAKGLTEMGRMLKIFIVLTD
                     KPGALKEVVDVISSLSVNIVEVVHDRLSSNIPAGTAGVTLSLETENPKHAGRLIEQLK
                     QRNIQFRIVT"
     gene            complement(2825..>3131)
                     /locus_tag="VEJ68_02285"
     CDS             complement(2825..>3131)
                     /locus_tag="VEJ68_02285"
                     /inference="COORDINATES: protein motif:HMM:NF013715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HXX05628.1"
                     /translation="EGFLGKKVNVWLRRVITRFINVIPTTIAILLGFDPLQILVYSQV
                     ILSLLIPLAIIPLVLITRNKKIMGEFVNRRITTAVAVLFTGIIIGFNLYLLTLGQSS"
BASE COUNT         1076 a          535 c          585 g          935 t
ORIGIN      
        1 atgacatgtc ggttgaacct accagatcca cgaatagcac tatcatgtgc attctttgtg
       61 aaacatgttc acgaagaaac ttgtcagatt catctacgga ataatcatat tcatagcctt
      121 tcttcagaga actccaaact cttttttgtg tttccttgat aagggattca ctatccaaca
      181 ttccactttt accgccaccc aacatcatgt ctacaatatt ggtcgtagat gcttgttcat
      241 caggaccatc ttttggtttt tcactcatct cgtgtcactc caaaggaaaa ttgacgccac
      301 atacaggaca ttgacctctt tcccctttgt attttatatc aaagtattgt atgatttcta
      361 cgtcacaatt ccaacatatt atcttcttaa aagtggattt tgtcatcctt tccctatgat
      421 ttcctaagct tctttttgat atttaaacca cccatccaaa tttataaaag aataggggta
      481 aaaaatcatg caaattccat ctagttctac ggattcattc attaaattat tgacagaaaa
      541 gggcgaaaaa acacaatcgt tattccttgg acaaattaat gctcttacaa aaaaagtacc
      601 tttgaaggta atgttaggag acggaacagt atctgaccaa gaatcgtttg atcctactgt
      661 agtaaggcag ttttacgaca atattttacg aaaattatcc agttggacaa atcagggagt
      721 gtcagtaaca gccgatcaag atttacggcg aagttttatc aaattcgaaa taaaagaagg
      781 aaattacctc ttaacatgtc acatgtcatt gcagtatcat gcgtttcttt tttacaaacc
      841 agatcataag gtaatacaaa ttcaacaaga attggcagaa ataactgata agattaaaga
      901 tctacaagaa aagttcaaac cagaaggaga caaacttgta gaagaggttc taaaacaaaa
      961 aggatatgaa aacatggatc atcaaaaact ctttgaggtg ttatttgaaa atgataaaat
     1021 cacaaatgat ctctcagagt tattacagac cactgaatta aaaatcaatg atctagtaac
     1081 aagaagagat tcgttatttc aagaacttga taaactgttg gttgaagtat atcatacaac
     1141 accaatattg atcgatgaga tgaaaatgat cgcagcagag gaaggctgtc tttgtaattt
     1201 caatcttgaa catgttaaga ataattcaaa ggaaggaaat tttgatccaa caagaatttc
     1261 tccaaaagta agagaagatt tgtcaaaaca catgaatgat atcattaaag ttttagaatg
     1321 ttgaaaaaat cttatatctt ggcatttttt aattattgat acattttgtc aaggggtcat
     1381 ggaactgatg caaggcgtca gatatatggg gagttgacac caagcgaccc cttgacttag
     1441 atctgatctt tggtctggat actatttagc cttttttaga tccttgaatt tattggaaaa
     1501 aatgaaaagc acaatagaat tttttagtaa attctatgta aaagatcaaa atgtaataag
     1561 gtttttctaa tgacaatatc ggagaatcca aatataccat aaaagaagtt gaaattctaa
     1621 tgaatttaag ttacgaggac atcataaaat cacagaagat acaaggtaaa gtaattcgta
     1681 gaactcctct ggaactttcg cgaacattca gtaagatgac aggttgcgag gtgcatctaa
     1741 aatcagaatg tctacaaaaa actggttcat tcaaagtccg aggtgcttat gccaagattg
     1801 ctactctgtc ccctgaagaa aaaaagaaag gagtgattgc ggcatcagct ggaaatcatg
     1861 ctcagggagt tgcctttgca tcttcgttgg agaaaatccc ttgtactatt gtgatgccag
     1921 ttactgcgtc tcctgcaaaa gtagcggcaa caagatcata tggtgcaaat gtgatattag
     1981 ctggaacaat ctatgatgaa tcgtggtcta aggcagttga attatcgcac aaaaagggtt
     2041 ctcagatcat acatgcgttt gatgatgagg cagtaatagc agctcaagga gtaataggtt
     2101 tagagatact tcaagatctt cctaatgttg atgagattta tgttccaata ggcggaggtg
     2161 gtcttgctgc tggaatatta cgtgctgtca agacaagaaa acctcacgtt aaagtaatag
     2221 gtgtacaatc tagtgcattc ccgtcaatga aaaaatccgt tgacgctgga aaacttgaaa
     2281 ctgtgcgagg acaacgtact attgcagatg gaatatcagt aaaaaaacct ggcgagttta
     2341 cttttaagat aatcaatgaa ctaattgatg atatcgtttt agttgatgat tctcaaattg
     2401 taaaagccat gtttctgctt atggaacgtt ccaaaatggt agttgagcct tccggtgctg
     2461 taagtttagc ttatctactt gacaaaaaac cagtaaaagg aaaaaaagta gtaccgatac
     2521 tttctggtgg caacgtagac atgtatctgc ttggacaaat tgttgccaaa ggactcacag
     2581 aaatgggaag aatgctcaag atattcattg ttctcaccga caagccaggt gctcttaaag
     2641 aagtggttga tgtgatttca tcattaagtg tcaatattgt tgaggttgtg catgatagat
     2701 tgagttctaa tataccagct ggcactgcag gagtaactct gagtttggaa acagaaaatc
     2761 caaaacatgc tggtcgtctt attgaacagt taaaacaaag aaacattcag ttcaggatag
     2821 ttacctagct agactgacca agagttaaca ggtacaaatt aaatccaatt ataattccag
     2881 taaacagtac tgcaactgca gtcgtaattc ttctattcac aaattcgccc attattttct
     2941 tgtttctagt aataagcact agtggaatta tggcaagtgg aataagaaga ctgagtataa
     3001 cctgactgta taccagtatt tgcaaaggat cgaatcctag aagtattgca atagttgttg
     3061 ggattacatt gataaacctt gtaatcactc gtctcagcca cacgttaact ttttttccaa
     3121 gaaatccttc c
//
LOCUS       DASPUS010000104         2605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1280290, whole genome shotgun sequence.
ACCESSION   DASPUS010000104 DASPUS010000000
VERSION     DASPUS010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2605)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2605
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280290"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..301)
                     /locus_tag="VEJ68_02290"
     CDS             complement(<1..301)
                     /locus_tag="VEJ68_02290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05629.1"
                     /translation="MEILRKIVQFYFMIVAISVLFLPAYAIQNSFSDSNLQLTLNYPD
                     VVEQGKGFILSSIVKATADQVSNITVTISSQELQVKQHMFHIDTLAKDSTFGNDFN"
     gene            444..575
                     /locus_tag="VEJ68_02295"
     CDS             444..575
                     /locus_tag="VEJ68_02295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05630.1"
                     /translation="MKAKFKTTCSECNAPIKVGEEIAKISSGKWVHKYCAPESNELP"
     gene            complement(956..1534)
                     /gene="dps"
                     /locus_tag="VEJ68_02300"
     CDS             complement(956..1534)
                     /gene="dps"
                     /locus_tag="VEJ68_02300"
                     /EC_number="1.16.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA protection during starvation protein"
                     /protein_id="HXX05631.1"
                     /translation="MTKKEPDVIGVKVLEQNGVNTKELIKALVYNASVEFTAYYYFTN
                     LRAHCTGMEGESLKGVIEDARMEDLSHFESCLSRIYELGGKLPIDAQEFIKMSGCEFL
                     QLPTNPTDTKAILEKCLKAEQGAIVNWNKVCKMTYDKDPATYDVAKDILREEIEHEAW
                     FLELLYGRPSGHMRRKFPGERPHTQKHSRSLG"
     gene            1633..2115
                     /locus_tag="VEJ68_02305"
     CDS             1633..2115
                     /locus_tag="VEJ68_02305"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HXX05632.1"
                     /translation="MIKYDFETSAGFIVNATAKTFQKVLDSELRKNVGVTISQWRVVA
                     ALVLYPGLTQKEIADKVGIEGATLVPVIDKMENEGLLKRRADSKDRRVNRIYLTPKAD
                     SLWNSMMECALRIRKISTRDIPEDQLKTTLETLRKISQNLVNHFDVDNFLTITKKSKS
                     "
     gene            2134..>2605
                     /locus_tag="VEJ68_02310"
     CDS             2134..>2605
                     /locus_tag="VEJ68_02310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HXX05633.1"
                     /translation="MSKNPNEPSSDKVSSKAWKTLAILSLIATMIMYSETMLVPAIPD
                     LIKDFHISYSTSSWILTTYLVTGAIMTPITGRLSDVYGKKKILLVIMLIYAVGVSLGG
                     FVTNIYEMLSIRIIQGIGMSMFPIAFGIVREQFPRKKLAIGQGIISSMFAAGAVI"
BASE COUNT          801 a          474 c          504 g          826 t
ORIGIN      
        1 cattaaaatc atttccaaaa gtggagtctt ttgctaatgt atcgatatga aacatgtgct
       61 gctttacctg tagctcttgt gaagaaattg taactgtgat attggatact tgatctgctg
      121 tagcttttac aatggaagac aatatgaaac cttttccctg ttctaccaca tccggataat
      181 tcaaagtgag ttgaaggttt gagtctgaaa aagagttctg aattgcataa gcaggtagaa
      241 acaaaacaga tattgcaact atcataaaat agaattgtac aattttacgc agaatctcca
      301 ttcatttgat ttaaactaca tgtgattgat aagcgcaacg gctcgtggtt ggttggccaa
      361 aaccttgagt gtttgctaga tagagtgtaa cacgtcttgt attccaactt ctagtttatc
      421 tatcccagat gtttccattg attatgaaag caaagttcaa gacaacttgt tcagagtgca
      481 atgctccgat taaagttgga gaagagattg caaagatttc ctcaggaaaa tgggttcaca
      541 aatactgtgc acctgaatca aatgaattgc cttgaggcca aaatgatggc cttttgcctt
      601 gatttggacc atgaatttag gattacgtgc acgagtaaac agcatactgc ccttgtaatc
      661 ctgatgccct gctcacattt gttgccgacg tgtcattttt gagaaccagg tgacagttgg
      721 agctactgtt gacatacatg ctgtgttgtt tattggttag cgatagtgcg gcgtctatgg
      781 aagaactagg tgtatgtttt tgaccctcaa aataaagatg gcctatgatt tctggtattg
      841 ctatcatcaa tattacaagc acggcaaact tgtttaaccg gctcttcttt ttttgatcca
      901 atattttcct gaatttaatt tattatatat taagatacaa aattttcagc aattactagc
      961 ccaaagatct tgaatgtttc tgagtatgag gtcgctcgcc tggaaacttt cttctcatat
     1021 gtccagaggg tcttccatac aataattcca aaaaccaagc ttcatgctca atctcttccc
     1081 taagtatgtc ttttgcaaca tcataggttg caggatcttt atcatatgtc atcttgcaga
     1141 ctttgttcca attgacgatt gctccctgtt cagcctttag acatttttcc aagattgctt
     1201 tggtgtcagt aggatttgtt ggtaattgta agaattcaca tcctgacatc ttgataaatt
     1261 cctgtgcatc aattggtaac ttgccaccca attcataaat tctggaaaga catgactcga
     1321 aatggctcaa gtcttccatt cttgcatcct caattactcc ttttagcgac tcaccttcca
     1381 ttccagtgca gtgtgctcta agatttgtaa aataataata tgctgtaaac tctaccgatg
     1441 cgttgtaaac aagtgccttt atcagctctt ttgtgttaac tccattttgt tcaagtactt
     1501 ttacaccaat aacatctggt tccttttttg tcacagattc gattcaggga ttctcaaaga
     1561 tataaagatt cgtaagattg tctgtgcaag atttataaca gttaggatac taatgattag
     1621 gtagctaagc atatgataaa atacgatttt gaaactagtg caggattcat agtaaatgcc
     1681 actgcaaaaa catttcagaa agtgctagat tctgagcttc gaaaaaacgt tggagttaca
     1741 atcagccagt ggcgtgtagt tgcagcactt gtactatatc cgggcttgac acagaaagag
     1801 attgctgata aggtgggaat agagggagcc acgctagtgc ccgtaattga taaaatggaa
     1861 aatgaaggtt tactcaagag aagggctgat tcaaaggata ggagagttaa cagaatctac
     1921 cttactccaa aagcagactc gttgtggaat tctatgatgg aatgtgcatt acgcataaga
     1981 aagatttcaa ctagagatat tccagaagat caactcaaaa ccacattgga aacccttcgg
     2041 aaaatttcac aaaatcttgt aaaccacttt gatgtggata attttcttac aattacaaag
     2101 aaatcaaaat cttgagggta aaatgaaatg gtaatgtcaa agaatccaaa cgagccttct
     2161 tccgataaag tatcgtcaaa agcatggaag acacttgcaa ttttaagcct gattgctacc
     2221 atgataatgt attcagaaac aatgctggtt ccagcaattc ctgatctgat aaaggatttt
     2281 catatatctt acagcacatc ttcatggata ctcacaacgt atcttgttac tggagcaatc
     2341 atgactccaa tcaccggtag attatctgac gtctatggta agaaaaagat actgcttgtt
     2401 ataatgctaa tttatgcagt aggggtttcc cttggtggat ttgttactaa catctatgag
     2461 atgctatcaa tccgaattat tcagggaata ggaatgtcca tgtttcctat tgcgtttggc
     2521 atagtaagag aacaatttcc gagaaaaaaa ttggctattg gccagggaat aatatcgtca
     2581 atgtttgcag ccggtgctgt tatag
//
LOCUS       DASPUS010000105         2439 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1556617, whole genome shotgun sequence.
ACCESSION   DASPUS010000105 DASPUS010000000
VERSION     DASPUS010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2439)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2439)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2439
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1556617"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..335
                     /locus_tag="VEJ68_02315"
     CDS             <1..335
                     /locus_tag="VEJ68_02315"
                     /inference="COORDINATES: protein motif:HMM:NF025210.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HXX05634.1"
                     /translation="SVSESILSVTIVFDDSLLPQVKGTFANYNILEVENDLAAIIVHS
                     PEQIIKTPGCAIAFYIQLARRHINIEDTVSCYTDTIILVKMTDVGKAFNALTELISSS
                     RKFPKKRQ"
     gene            369..1271
                     /locus_tag="VEJ68_02320"
     CDS             369..1271
                     /locus_tag="VEJ68_02320"
                     /inference="COORDINATES: protein motif:HMM:NF024804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HXX05635.1"
                     /translation="MYRRYTLDEVKRKIINSLQDNATGLSGVELASTTGINRMTLTKY
                     LNILATMRLIKKKRVGSINVWFVEPGMVEYEFPLNYLEVQQKFMNAIMLGDGNQARNI
                     LVSVINSNIELLKILTDIVVPTVNTVNELYNRGRLGKTERIHLLNLILELVDLLKFTI
                     QTGNIKRSASCFFVAASEDRIYHAKIGALALQILGFRTLYIGNVEQHIDPFFDIDFQR
                     YIVKLWDNNKGLLIICIYSSEEGSLRFLYSASNTIKAKLKAEVRIALFTKPELRNAME
                     SLGADYVVNDLTSLIDWVERETSK"
     gene            1886..>2439
                     /locus_tag="VEJ68_02325"
     CDS             1886..>2439
                     /locus_tag="VEJ68_02325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HXX05636.1"
                     /translation="MNKTQMMILFSVSIGLLLFSLVTEGPVGVVAAFSTVHERHEFPV
                     SVFMHNYTTQPTAQIYPLPIRQNMQNLHFKYFSLTKLTTLASSTPLTDIFKRVENSVV
                     QITNRVNDTGLQIIINGNHLQGQSTKLGSGFVYDDQGRIVTNDHVVNGAKTVDVVFVD
                     GNTYTAKVIGTDPSSDLAVLQITD"
BASE COUNT          786 a          446 c          461 g          746 t
ORIGIN      
        1 tcagtgtctc agagagcata ctatcagtaa ccatcgtctt tgatgacagt ttactacctc
       61 aagtaaaagg aacattcgcc aattataaca tattagaggt tgaaaatgat ttggccgcaa
      121 ttattgttca cagcccagaa caaattatta agactcctgg ttgcgcaatt gccttttata
      181 ttcagcttgc gagaagacat attaatatcg aagatactgt cagctgttat accgatacca
      241 tcatattagt caagatgact gatgttggaa aagcattcaa tgccctcaca gaactcatat
      301 ccagttctcg caaatttcca aaaaaaagac aataaaattt tttagtcttc ggaggggttg
      361 aggggttgat gtacagacgt tacactctgg atgaagtgaa acgtaaaatt atcaattcct
      421 tacaagacaa tgctaccggt ttatctggtg tcgagcttgc gtcaacaacg ggcattaata
      481 ggatgacact caccaagtac ctaaatatcc tagcgacgat gagattaatc aagaaaaaaa
      541 gagttggttc tataaatgtg tggtttgtag aaccggggat ggtagaatat gaatttcctc
      601 tgaactatct tgaagtccaa caaaaattta tgaatgcaat aatgcttggt gatgggaatc
      661 aagcccgaaa cattttggta agtgtgatta attcaaatat cgagttatta aaaattttaa
      721 cagatatagt agttcctact gtgaacaccg tcaatgaatt atacaatagg ggacgattgg
      781 gaaagacaga acgaattcat ctgttaaatc taatactcga attagtcgat ttattgaagt
      841 ttaccatcca gacaggcaac attaaacgga gcgcttcttg ctttttcgtg gctgcatctg
      901 aagaccggat ctatcatgca aaaattggag cacttgcatt gcagattttg ggattcagaa
      961 cattgtatat tgggaatgtt gaacagcaca tagatccttt ttttgatatt gatttccaac
     1021 gttacatagt gaagctttgg gataataaca aaggtttatt gataatatgc atttactcct
     1081 ccgaagaagg ctcacttcgt tttttgtatt cagctagtaa tacaatcaag gcgaagctaa
     1141 aggccgaagt taggatagcg ttatttacaa aaccagaact gcgaaacgca atggaatctt
     1201 taggtgctga ctacgtcgta aatgatctga cctcacttat tgattgggta gaaagagaaa
     1261 cttcgaagtg ataaaacttc actgaaccgt gaacttgaac ttgacaatct gaaacaatta
     1321 caatattaca atgttatcta gtagcacgtg acatgaaaag tgtcaggtcg acttgtcttg
     1381 taccaaacta gatttgctat aaactgtaca atcagtttcg gtcttttaca tttaaaaaat
     1441 aatgacggcg gtttgtatcc tcaatcttta ctaataagtg gatctctcaa ttctcgtcga
     1501 ttatactcag gttttcgagc ttgtcataaa gcgcgtttat ttgagactgg atctctagct
     1561 tatctacttg cgtgtttaga gattctttct ttaagtacag ctctctaatt tgtttatgca
     1621 aactgtgttt cataacccca atcgactgat tcatgtatct tgggaaaata ataaaaatta
     1681 gttatcatta attgtcaaat aattttgccc ctgttgacaa atttcaatat gatgtcttat
     1741 gttctcatac agttccagaa tcaggtacac gtgaacaggg aaaatgatat tatcagaaag
     1801 cttgtggcta attatcagac taactcttat attgtagaaa aatatctata tcccttcaac
     1861 attccattgt ttgcaaattg gcactatgaa caaaacacag atgatgattc tattcagtgt
     1921 cagcataggc cttctgcttt tctctcttgt cacggagggc ccagtcggtg ttgttgccgc
     1981 cttctccacg gttcatgaga ggcatgaatt ccctgtatcg gtatttatgc acaactacac
     2041 tacacaacct acagcgcaga tctatccatt gcctattcgt caaaacatgc aaaatttgca
     2101 tttcaaatat tttagtttga caaaactaac gacattagca tcgtcaacgc cacttaccga
     2161 tattttcaag agagtcgaga actcggtagt tcagataaca aacagagtaa acgacacagg
     2221 tttgcaaatt atcataaacg gtaaccattt gcaaggccaa tccaccaagt tgggatcagg
     2281 atttgtgtat gatgatcaag gacgtatcgt gactaacgat catgtggtaa acggtgctaa
     2341 aacagttgat gtagtctttg ttgatggaaa tacatatacc gcaaaagtaa taggcaccga
     2401 tccgtctagc gatcttgcag ttttacaaat aacagataa
//
LOCUS       DASPUS010000106         2472 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1834176, whole genome shotgun sequence.
ACCESSION   DASPUS010000106 DASPUS010000000
VERSION     DASPUS010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2472)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2472)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2472
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1834176"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            333..1049
                     /locus_tag="VEJ68_02330"
     CDS             333..1049
                     /locus_tag="VEJ68_02330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05637.1"
                     /translation="MLSILSIPAYYNSPHFLSDAEHKFIGSMSGGNMNTASMLRQMGY
                     PSMHQVIPILQYSLIGVGVAGIGLAMFGIVAKKRPKSVPVKLVADKSLEESPITDSSR
                     RPETMKDIKSDTGNKVMYEAVDDILGKLETELEKMRTSYEDHKLKTENEENKFEQRER
                     KQMAKIIATGEVLKKEVTPDQFGERIKYYVELKNEKTGQPVDLSLLAEKFAKIRKTTE
                     FDDSYITKTEFKTIKKSLGK"
     gene            1301..1642
                     /locus_tag="VEJ68_02335"
     CDS             1301..1642
                     /locus_tag="VEJ68_02335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05638.1"
                     /translation="MERSEIKITLSKKPTDAQIQKIQEYFVEMPMDEILAGLNFARNR
                     WTAKDAGVLKVGRKSIIKKEIHSITSEQAQWRLKNWKMMIANYRRLGYSYPTISRIKK
                     ILLEISKKRSR"
     gene            complement(1635..2291)
                     /locus_tag="VEJ68_02340"
     CDS             complement(1635..2291)
                     /locus_tag="VEJ68_02340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05639.1"
                     /translation="MLQIKIMNFTNKWNTQKESISQKVIDKVKPDAPLKPKIDEAQKR
                     LQLQVSKLDSIAKKLKEKDDFIFKKVVEAVRLQNKPYSQAYATELHEIRKMTNMVVTA
                     KLAMEQIQLRLNTISELGDVVVTLSPCMSIIKGLGSGLSGLMPEANSSMQDLSNILGD
                     IMAGASVSAENSFTIDATNADTTQILEEAHAILEGHVRQTLPDLPPSLPPTAKAQEPI
                     "
BASE COUNT          797 a          407 c          489 g          779 t
ORIGIN      
        1 ctgttattag tacgcacaag tgttaaaccc ccatctaaaa tcggggtttt tgaaaaaatc
       61 agtctaggca taattgtgga aaaataacag ggggtttagc ctttaggttt aaattgtgat
      121 ttgtactgtt tttttatgaa attgtcaatc ttcatggtca attttgggta tttttaggac
      181 taagacagtc aaaatcatta ttcattccct gatcttggac taattttaac tggtttgtgt
      241 ggggagttgt taggtcttaa tacaaacaac tggatattag gtcctagtac ttcattacac
      301 aaatgcaaat agcgctagtg gttgtaggtc tgatgctctc tatactctca attcctgcct
      361 attataattc gccacatttt ctatccgacg cagagcacaa gtttattgga tcaatgtctg
      421 gtggcaacat gaacactgcg tcaatgctac gacaaatggg ttatccctcc atgcatcaag
      481 tgattcctat tctgcaatat tctttaatag gagttggagt tgctggaatt ggtctggcaa
      541 tgtttggaat tgtagcaaaa aagcgtccaa aatcagtgcc tgttaaacta gttgcagaca
      601 aatcacttga agaatcacca ataactgatt catctagaag accggagaca atgaaagata
      661 tcaaatcaga tacaggaaac aaagtgatgt acgaggcggt ggatgatatt cttggtaaat
      721 tagaaacaga gctagagaaa atgagaacaa gttatgagga ccacaaatta aagactgaaa
      781 atgaggaaaa caaatttgaa caaagagagc gaaaacaaat ggctaagatc atagctactg
      841 gtgaagtttt aaagaaagaa gtcacaccag atcaatttgg agaacgaata aaatattatg
      901 ttgaattaaa aaatgagaaa acgggacaac cagtggattt atcattactt gctgaaaaat
      961 ttgccaaaat aagaaaaacc acggagtttg atgatagcta catcacaaaa actgagttta
     1021 agacaataaa gaaatctcta ggcaaataaa acacaatttc cgtctttatg gttacgtttg
     1081 gaatattaat cctctttttg agtcaagtct agagacaaac aagtaattgc ctgcttcatg
     1141 ttattgttct caaatatttg tgtaatttaa caacaaagta tctcgaggtg tagtcattta
     1201 aaaataagaa tctgaattat gttgtttaac aaaataggca gtagatggaa aatatgtttt
     1261 cacccgtaga ctaattaggt acatatttca gaattcgagt atggaaagat cagaaatcaa
     1321 gattacgcta tcaaaaaaac caaccgatgc gcaaatacaa aaaatccagg aatattttgt
     1381 ggaaatgcca atggatgaga tcttggcagg acttaatttt gcaagaaatc ggtggaccgc
     1441 aaaagatgct ggagtgctaa aggtaggacg aaaaagcatt ataaaaaaag aaatacattc
     1501 gattacatct gaacaagcac aatggcgact taaaaactgg aaaatgatga ttgcaaatta
     1561 cagaagacta ggatatagct atcctaccat atcgagaatc aagaaaatcc tacttgaaat
     1621 aagtaagaag cgctctagat aggctcttgt gccttggctg tggggggaag acttgggggt
     1681 aagtctggca gcgtttgtct cacatggcct tctagaatcg cgtgtgcttc ttccaatatt
     1741 tgggtcgtgt cggcattcgt ggcatctatg gtgaagctat tttctgcact tacagatgct
     1801 cctgccatga tatctcctag aatatttgac aggtcctgca ttgaagaatt ggcttctggc
     1861 ataaggccac ttaggccgct tcctagtcct ttgattattg acatacatgg gctgagtgtg
     1921 actacaacat ctcctagttc agatattgtg ttcaatctga gctgaatctg ctccattgct
     1981 agttttgctg tcacaaccat gttagtcatt tttctaatct catgtaactc tgtggcatat
     2041 gcctgagaat atggtttatt ttgtaatctt accgcctcaa caactttttt gaatatgaaa
     2101 tcatcctttt cctttagttt ctttgcaata gaatcgagtt ttgagacttg aagttgtagt
     2161 cttttctgtg cctcatcaat ttttggtttt aatggtgcgt ctggttttac tttatcaatc
     2221 actttctgtg atatggattc cttctgggta ttccatttgt tggtaaagtt cattatttta
     2281 atctggagca tgatctggat tgggatttta aactttcatg ttctgcagat acttgtaact
     2341 acagttacag tattctatgg ttacaacgtt tagattggcc aattataatt aacatatttc
     2401 caaattcgaa ttttgaaaca ttattttttg attcacgtca tccaaaggta aatgtgtaaa
     2461 tctggaaacc tg
//
LOCUS       DASPUS010000107         2491 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_884562, whole genome shotgun sequence.
ACCESSION   DASPUS010000107 DASPUS010000000
VERSION     DASPUS010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2491)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2491)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2491
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_884562"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..510)
                     /locus_tag="VEJ68_02345"
     CDS             complement(<1..510)
                     /locus_tag="VEJ68_02345"
                     /inference="COORDINATES: protein motif:HMM:NF028479.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-bladed beta-propeller"
                     /protein_id="HXX05640.1"
                     /translation="MFTLIGIIVILLGTFSQYALADTTPAFVIQWGVYGLQTNGQFAF
                     PQGIAVDSSGNVYVTDQGNRRVQQFDNDGNFKFAWGTTGSGNGTFHDPEGIAVGNDSI
                     YVVDNELDSVQKFNMNGQFVTQWGTKGTGNGQLLAPQGVAVDSQGNVYVVDTGNSRIQ
                     KFNSNGNFLS"
     gene            complement(792..1238)
                     /locus_tag="VEJ68_02350"
     CDS             complement(792..1238)
                     /locus_tag="VEJ68_02350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013482402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HXX05641.1"
                     /translation="MATRLEFDRKLVKADEFKGKKVIDREGIEYGKVKHVHINSDTLE
                     VVGITVHEGINKNYFLSRDYVDRFTEESVLLSSAPIRTDVAVVDIDGRKIGKVKRLNM
                     STETNDLESIEVTEGLTGSRIFHISEIWGVGEKIILRQTRDEYKRP"
     gene            1232..1645
                     /locus_tag="VEJ68_02355"
     CDS             1232..1645
                     /locus_tag="VEJ68_02355"
                     /inference="COORDINATES: protein motif:HMM:NF016001.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase/quinone reductase family protein"
                     /protein_id="HXX05642.1"
                     /translation="MPWRNLAKSVYSSRYQGFQSNGLKFFITKIIPVKFKQETFYSIL
                     VTIGRKSGKEHAVELKAVFHEGKLYFSRRNSNSDWLKNAVANTHVKVIIDDKTLAGKA
                     SLVSDEELIRTISHLKYTDNRAEEARIVLEVILCE"
     gene            complement(1629..2270)
                     /locus_tag="VEJ68_02360"
     CDS             complement(1629..2270)
                     /locus_tag="VEJ68_02360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05643.1"
                     /translation="MLPLDKDGIPYDAGSEKASSVEDYKVTCMQFISDISNDYLAWVD
                     YYKLPQEEDKKRRDKIHAIVDRTNEWIAKVATTIKGVDVVMNDGIQKMAENTAGYPFQ
                     IGVFVNNISEYVLAKSGIIDINVKAIGREGCKVKLGWHQKDQRFLISSTAPIHIDESN
                     ISEQEYDLLNLDLKLDAQKCQPRDLISFTVVLTETKDGQEHERRGVTTIIHIG"
BASE COUNT          767 a          501 c          413 g          810 t
ORIGIN      
        1 agacaagaaa ttcccattac tgttaaattt ttgaattcta ctgtttccag tatctacaac
       61 ataaacatta ccctgagaat cgactgcaac tccttgagga gctaataact gaccatttcc
      121 agttccttta gttccccact gggttacaaa ttgaccattc atattgaatt tctgtacact
      181 gtctaattca ttatcaacaa cgtaaatgga atcattgcca actgcaattc cttcaggatc
      241 gtgaaaggta ccatttccag aacctgttgt tccccatgca aacttgaaat tcccatcatt
      301 gtcaaactgt tgaactcttc tatttccttg gtctgttaca tagacatttc cagatgaatc
      361 aactgctatt ccctgaggaa atgcaaattg tccattggtt tgtagcccgt atacacccca
      421 ttgaattaca aacgcgggag ttgtgtctgc taatgcatac tgactaaaag tgccaagtaa
      481 gattactata atacctatta gcgtaaacaa agccttcaac gagagaaagt tgtaaagtac
      541 caaaaagatc tcctaagtga ggaattgttg caatttttgt caatttaggt gaattagaag
      601 tgactttacc tctcttacta attcatgggt tgctattgca gctatattaa caagcccaaa
      661 aattatgacc agcttgaggt cagtgagaaa gtcatatagt tcctgacaac atttgcagga
      721 ttatcccacc aagtagaaca aagactgcta caaaaacaag ccgtgaacat acaaaaataa
      781 aaggttaaag attaaggtct tttgtattcg tctctagttt gtcgcagaat tatcttttca
      841 cccactcccc aaatttctga tatgtgaaag attcttgagc ctgtcaatcc ttctgtgact
      901 tctattgact ctagatcatt tgtctccgtg ctcatattga gtcgttttac tttaccaatc
      961 tttcgaccat caatatcaac tactgctacg tctgttcgta ttggcgctga tgaaagcaaa
     1021 accgattcct cggtaaatcg atctacgtaa tcacgtgaca ggaagtaatt tttgttaatt
     1081 ccttcatgga cagttatgcc cactacctcc aaggtatcgg agttgatgtg aacgtgtttc
     1141 accttaccgt attctattcc ttctctatca atgacttttt ttcctttaaa ttcgtctgcc
     1201 tttactagtt ttctatcaaa ttcaagtctt gttgccatgg aggaatcttg ccaagtcagt
     1261 ttattcaagc agatatcagg gttttcaatc caatgggtta aaattcttta taacaaaaat
     1321 aatacctgtg aaattcaaac aagaaacttt ttattccatt ttggtcacga ttggaagaaa
     1381 atcaggaaaa gagcatgcag ttgaattaaa ggcagttttt catgagggta agctctattt
     1441 ttccagaaga aattcaaaca gcgattggtt gaaaaatgca gtagcaaaca cacatgtaaa
     1501 ggtaataatt gatgataaaa cattggcagg aaaagcatcg ttagttagtg atgaagaatt
     1561 gataagaaca atttcccatc taaagtatac tgacaaccgt gcagaggagg caagaatagt
     1621 gttggaagtt atcctatgtg aataatagtt gtaacaccac gacgttcatg ttcttgtccg
     1681 tctttagttt cagttaaaac gacagtaaat gatatgagat ctcttggttg acatttttga
     1741 gcatccaact tcagatccaa gtttaacaaa tcatattcct gttcagatat atttgattca
     1801 tcaatgtgaa ttggggcagt agaacttatc aggaatcgct ggtctttttg atgccaaccc
     1861 aacttaacct tgcaaccttc cctccctatt gcttttacat tgatgtctat tattccggat
     1921 ttagccagta cgtactccga tatattattt acaaaaacac ctatctggaa gggatatcca
     1981 gcagtgtttt cagccatctt ttgaatccca tcattcatga caacatcaac tccttttatt
     2041 gtggttgcaa ctttagcaat ccattcattt gtacgatcaa ctatagcatg tattttgtcc
     2101 cttcttttct tatcctcttc ttgtggaagc ttgtaataat caacccatgc gagataatcg
     2161 ttacttatat cactgataaa ctgcatacat gttaccttat agtcttctac acttgatgct
     2221 ttttctgaac ctgcatcata aggtatgccg tccttatcaa gtggaagcat gcgttacttg
     2281 gaattttgcc gctaattaag tgaacccaat aaatatgaga aaaagaagtt tctgccatga
     2341 gcttttcatc aattgccatc gaacttcaaa aaaaacttgg atctaacttg cctcaaatta
     2401 gatttctttt gaaaagaaat cctggactgg cctttacaac aataaacgag attacggcta
     2461 atgttggtaa gagatacaac attaaactct c
//
LOCUS       DASPUS010000108         3591 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1012277, whole genome shotgun sequence.
ACCESSION   DASPUS010000108 DASPUS010000000
VERSION     DASPUS010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3591)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3591
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1012277"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            343..486
                     /locus_tag="VEJ68_02365"
     CDS             343..486
                     /locus_tag="VEJ68_02365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05644.1"
                     /translation="MKKAWRGYKIAKVQSDHGKMAEYAKKIRTLQNDLGVKQAEFPEL
                     NLS"
     gene            961..1185
                     /locus_tag="VEJ68_02370"
     CDS             961..1185
                     /locus_tag="VEJ68_02370"
                     /inference="COORDINATES: protein motif:HMM:NF013582.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LSM domain-containing protein"
                     /protein_id="HXX05645.1"
                     /translation="MTRPLPAIYSSIGKEVIVICKDGTEYAGRIFEVDENMNIVLSDA
                     KINGNANSEKDSLFLLRGMLISIVRLNIQE"
     gene            complement(1220..1450)
                     /locus_tag="VEJ68_02375"
     CDS             complement(1220..1450)
                     /locus_tag="VEJ68_02375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05646.1"
                     /translation="MHTFEAIMMTVMAVAMFTMALSMLVIHFYWALFLLVSTVAMSVV
                     GVGYFSWKTAKCMCGTGCEHCNRDKNNDSCHE"
     gene            complement(1437..3548)
                     /locus_tag="VEJ68_02380"
     CDS             complement(1437..3548)
                     /locus_tag="VEJ68_02380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042625 - ATPase-coupled ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HXX05647.1"
                     /translation="MARDPICGMFVEEKNDTINCELEGRRYYFCCKSCLDEFSMPEKE
                     LKKLKRHVGLSIILTLPIILLTYLNLFPHQLNSYILFALATPVQFWLGWRFYQGTFDA
                     FKHKMTNMDVLIAIGTSTAWSYSTIVTFVHNIFPMADVYFETSSVIITLLLIGRLLES
                     RTKTRATRAVKKLLDLKPKFAHVITDGQEKETPVEQVRLDDIIIVRPGERVPADGIII
                     DGRSSVDQSAITGESIPVEKEVGDEVIGSTINKEGAFKFKVTKIGEESVLSQIVKLVE
                     EAKSSKVPIQKLADKISSYFVPLIITIATISALGWFFVGGIGLTFSILAFVSVIIISC
                     PCALGIATPAALMVGAGKAAENGILIKGGENLENARKVEVIVFDKTGTLTKGIPSVTD
                     VLSLDGMDSNEILRLAAIAEKNSEHPIAKAIVRYAKTSNIPIADPDNFKSLTGSGITS
                     QYGDHHILVGNKKLVTDNGIVIDEKLGKKIQGLEEEGKTTIIICIDEKLSGIIAMMDS
                     TSDHAQETIRRLKRNGIGIIMLTGDNMRTANAIAKNLGIDRVLAEVTPQEKENLVKKI
                     KQEGKTVAMVGDGINDAPALAAADLGISFGSGTDIAKETGGIILVKDDLRDVVTAIEL
                     SKKTVAKIKQNLILSFAYNSALIPVAAGALVPIFGPHVYMLLPFLAAGAMATSSVTVI
                     SNSLLLNRYKPMQWRIKNAHI"
BASE COUNT         1081 a          722 c          610 g         1178 t
ORIGIN      
        1 ttatggttaa gagtattagc aagtatgcca gactttacat attataatgc aacccaacag
       61 tagaaagttt taaagaataa ccaccaaatc tcaacaacca aaataaacac cttttaactc
      121 gacacttccc aaaatacttg aaaaatacaa attaattcaa aattttttac acgtagtcaa
      181 ggctaacatc gtgatttcaa tgcgagaatc ttgacttttg tattgatttt gcttcacatg
      241 gctgtagata acaaattctg gcaatgagtc caacagatgt accaattcgt acaaccacaa
      301 tcgaacaacc ctaactatac tgcgggtcag acgtgggggg ctttgaagaa ggcatggcgg
      361 ggatacaaga ttgcaaaagt gcaatctgac cacggcaaaa tggcagaata tgcaaagaag
      421 atcagaaccc ttcagaatga tttgggagta aaacaagcag aattcccaga attgaacctg
      481 agttagttag actcactttc tttttcgatg tattgtactc agcactaact atctttaaaa
      541 attgataatt ttctcaatta gtgtactcaa ttataattac agcgggttcg cgggtcttca
      601 tgctgttaac ggtttcttag aatctagata ctaatttact ttacactgcg agacctaaat
      661 agactttgtt tattgtgcgg atccaaaaca ttctgaaccc atttacatta acctcaatct
      721 cccatcggac ctgtgaggtt tcgaatttta caagattcaa acatatgcag ttgttaaatg
      781 acgattttta attgtaaaat catgcataaa cagctgggtt tggaactaat atcgaaatac
      841 tcatcaattg taagcagcaa atttttaaaa tataataaat taattttgtt gattatcagc
      901 agtgagaatc atcctcaagt atagacctat tcgagtctaa cttatttttg ataataaggg
      961 atgacaagac cccttccagc aatttacagc tctatcggca aagaagttat cgtcatttgc
     1021 aaagatggta ctgaatatgc tgggagaatt tttgaagtag acgagaatat gaatatagta
     1081 ctaagtgatg ctaagataaa tggcaatgca aattcagaaa aagattcact ctttctttta
     1141 cggggaatgc tcatctccat tgtacgatta aacattcagg aatgaaaaac cagcgtagat
     1201 tttacattac tttagattgt cattcatgac aagagtcatt atttttatcc ctgttacagt
     1261 gttcacaacc agtaccacac atgcattttg cagttttcca agaaaaatat cctacaccta
     1321 caacagacat tgctactgta gaaacaagca ggaatagggc ccagtaaaaa tgaatgacta
     1381 acatagacag agccatagta aacatggcaa ctgccatgac tgtcatcatt atggcttcaa
     1441 atgtgtgcat tttttatcct ccactgcatt ggtttgtatc tatttaataa caaagaatta
     1501 ctgatcacag ttactgaact tgttgccatg gcaccagccg caagaaatgg caagagcata
     1561 tacacatgag ggccaaatat tggaacaagt gcacctgctg caaccggaat taatgcagag
     1621 ttgtatgcaa acgataagat aagattctgt ttaatcttgg caacagtttt tttgcttaac
     1681 tctattgccg ttacaacatc tcgtagatca tctttgacaa ggataattcc ccccgtctct
     1741 tttgcgatat ctgttccact tccaaatgat attcctaaat cagctgccgc tagagctggt
     1801 gcatcgttaa ttccatctcc aaccatggcc acagtctttc cttcttgttt tatctttttc
     1861 accaagtttt ctttttcttg aggtgttacc tctgccaaga ctctgtcaat cccaagattt
     1921 tttgctattg cgttagcagt tctcatgttg tcacctgtga gcattattat cccgattcca
     1981 tttcttttga gcctccgtat ggtctcttgt gcatgatcac ttgttgaatc catcatcgca
     2041 attattccag atagtttttc atcgatgcaa attatgatag tagtttttcc ttcttcttcc
     2101 aaaccttgaa ttttttttcc tagtttttca tctatcacta ttccattatc tgttacaagt
     2161 tttttatttc caactagaat atgatgatct ccatattgtg atgttattcc actacccgtt
     2221 aatgacttga aattgtctgg atctgcgatt ggaatgtttg atgtctttgc atacctgaca
     2281 attgcctttg caatggggtg ttctgaattt ttttctgcaa ttgcagcaag gcgtaatatt
     2341 tcattactat ccatcccatc taatgacaaa acatctgtta ccgaaggaat tccttttgtc
     2401 agagtcccag ttttatcaaa gactatgact tcgacctttc tggcattttc taggttttct
     2461 ccacctttaa tcagaatgcc gttttcggca gctttgccag ctcctaccat aagagctgcg
     2521 ggagttgcaa ttcccaaagc acaaggacag gaaattatta ttacagagac aaacgcaaga
     2581 attgaaaaag taagaccaat ccctcctaca aagaaccatc caagagcaga aattgtcgct
     2641 attgtgatta ttaggggtac aaaatatgat gatattttat ctgcaagttt ttgaataggc
     2701 accttgcttg attttgcttc ctctacgagc tttactatct gcgataaaac agattcttca
     2761 ccgattttgg ttactttgaa tttaaaggct ccttctttgt taatcgtact tccaattact
     2821 tcatcgccaa cttctttttc cacaggaatg ctttcaccag ttattgcaga ttggtccact
     2881 gatgatcttc catcaataat tattccatcg gctggtactc tctcgccagg cctaactatt
     2941 atgatgtcat ccagtcttac ttgctcaaca ggagtctctt tttcctgccc atctgttatt
     3001 acatgagcaa attttggttt caggtctagc aattttttta cagctctagt tgctctggtc
     3061 ttggttctgc tttcaagtag ccttccaatc agcaaaaggg taattatcac tgaagaagtt
     3121 tcaaagtaga catctgccat cgggaaaatg ttgtgtacaa aagttacaat agtgctataa
     3181 ctccatgctg tggatgttcc tattgcgatc aagacatcca tgttggtcat tttgtgcttg
     3241 aatgcatcaa acgtgccttg gtagaatctc caccctaacc agaactgtac tggagttgcc
     3301 agtgcaaaaa gtatgtacga atttaactgg tgaggaaaaa ggttgagata agtaagcaaa
     3361 attataggta gtgttaaaat tatactcaat ccaacatggc gtttgagttt ttttaattct
     3421 ttttctggca ttgaaaattc gtcaaggcag cttttgcaac aaaagtagta tctccttcct
     3481 tccagttcac aatttattgt atcgtttttt tcctcaacaa acattccgca tattggatca
     3541 cgtgccattt agatcatctc aaaaaaatga aataagtacg aaactaatgt c
//
LOCUS       DASPUS010000109         4589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1422548, whole genome shotgun sequence.
ACCESSION   DASPUS010000109 DASPUS010000000
VERSION     DASPUS010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4589)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4589
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1422548"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..555)
                     /locus_tag="VEJ68_02385"
     CDS             complement(<1..555)
                     /locus_tag="VEJ68_02385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HXX05648.1"
                     /translation="MPKIAIFDSGLGSLSIIRPLQKKIRAEIIYFADQDNFPYGTKSI
                     LQLKKIINATIKKLQKKFEPDVVVVGSNTPSLLLGIPTRLKIVGVYPPLYEASKITKT
                     KTIAVLATESVVKSKKLTNYIKKKVPNTIKTIKINASPLIELVESEKFISKKLYCNKK
                     IKQTLKPLLSEKADVAILSSTHLPF"
     gene            662..1303
                     /locus_tag="VEJ68_02390"
     CDS             662..1303
                     /locus_tag="VEJ68_02390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014966136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Snf7 family protein"
                     /protein_id="HXX05649.1"
                     /translation="MTGFDKTWTRPESVGLTEKLRETVKPQGALKPRIESAVNKLQGQ
                     ISKMDSMLTKLRERDAQLFKRIVAAMQHHDAAASRVLSNELAEIRKVTKMLGNARMAL
                     EQVQLRLTTIHDLGDAMVAIAPAMSTMKGLKSSLGRFMPEADSELNAMTSTLNGLMMD
                     SLAGDGFNVDTDASSEETDKILQEASAVAEQQIGDRFPSVPSPSGVSSQSTYE"
     gene            complement(1352..2014)
                     /locus_tag="VEJ68_02395"
     CDS             complement(1352..2014)
                     /locus_tag="VEJ68_02395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HXX05650.1"
                     /translation="MTTKLEKHNKKIISCKKCPRLSRYIRQIAKTKVKRFSDQKYWGR
                     PLSGFGDPKARLLLIGLAPAAHGGNRTGRMFTGDSSGDWLAKVLYENGFSSLPTSQKM
                     GDGFQLKDTYVTAAVRCAPPQNKPLKSELENCSGYLREELGLLENVEVIICLGKIAYD
                     SCCKLLQIKGIKFSHGKSFTHKNYTIICSYHPSRQNTQTGRLSWAQWSDNFSIARKIL
                     SD"
     gene            complement(2033..2806)
                     /locus_tag="VEJ68_02400"
     CDS             complement(2033..2806)
                     /locus_tag="VEJ68_02400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05651.1"
                     /translation="MLKIVIALIIVMIIYPHLAFAQPQIFTTLRGGVNAIIWDGKWSF
                     LQEWKPTSEDILKFDDGNELAIKTGHDRENLYVFLDFVTENQFKKFSDSGVVCMVSNK
                     TTELSPQKDDYCFFIALGHNSPLTFQGGGYLGLTNYFMKIENDPSLIAIGGISDEHDR
                     YSSIPHASYEFKIPIKVVGSSDVYGFYVAVYDAQTSKTYSWPQNISNQSFPEIPPPSK
                     WGELISPDKSLPEFPYPVITILFATMITIYLSRRHICFN"
     gene            2891..3118
                     /locus_tag="VEJ68_02405"
     CDS             2891..3118
                     /locus_tag="VEJ68_02405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05652.1"
                     /translation="MKKGAMVAIGVGIAIAIAVILGFTAKTEKETATLNSTIGTPVSS
                     PTTQTLPTTPPIIKGKNFSVTLSETVASSAH"
     gene            3292..3924
                     /locus_tag="VEJ68_02410"
     CDS             3292..3924
                     /locus_tag="VEJ68_02410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05653.1"
                     /translation="MTTSHRNLAIILMGVIALSTSGVYSLTQNVQTQTNAGTTEQPVI
                     LGHIVAIVKDPNGNIKAFRQTDNLVVSNGLNSTVNALFGAGTQTLSSGTSPGTFKYVG
                     VGTGSTAVAYTDTGLQTQRGLKHLGTVTAITASGGTGMGAQIVANWGAGILANSSSTS
                     TTINEAGLFDSTANATSSSNMYAHQIISPGISMGTADTLQVTWKITMAHS"
     gene            complement(4278..>4589)
                     /locus_tag="VEJ68_02415"
     CDS             complement(4278..>4589)
                     /locus_tag="VEJ68_02415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05654.1"
                     /translation="SPQVELVDLPSKDKAEYYQFMHQAIENLAKSIDQEPTADIYIDL
                     YTGDGTLLYSVNYVKCNVNSFWISTDSNKMDYRMASEDQSEYREFGNFICQGYHIIPK
                     Q"
BASE COUNT         1436 a          875 c          829 g         1449 t
ORIGIN      
        1 aaatggaaga tgcgtacttg acaatatagc aacatctgcc ttttcgctta aaagtggttt
       61 tagagtttgc tttatttttt tattacaata cagttttttt gaaataaatt tttcagactc
      121 tactagttcg ataaggggcg atgcattgat tttaattgtc ttgattgtat ttggcacttt
      181 tttcttgata taatttgtca attttttact ttttacaact gattctgttg caagtactgc
      241 tattgttttg gtcttagtta tcttggatgc ttcatacaat ggtggataga ctccaacaat
      301 ttttaatcgc gtaggtatgc caagtaaaag tgagggtgtg tttgagccca ctactactac
      361 gtcaggctca aatttttttt gtaatttttt tatggttgca tttattattt tttttaactg
      421 taaaatcgat tttgtaccat aaggaaaatt atcttgatct gcaaaataga taatttctgc
      481 tctaattttt ttttgaagtg gtctgattat tgacaaggaa cctaggcccg aatcaaaaat
      541 tgctatcttt ggcacaatct gaaaaaaatg atgcccgatt tacattttgt gagctaaatt
      601 tagcctaatg ttgatgataa tatacaccgg caattaagaa caaactccaa aactagccca
      661 catgaccggc ttcgataaga cctggactcg tcccgagtct gtaggtttaa ccgaaaaatt
      721 acgtgaaact gtaaagccac agggtgctct aaaacctagg atcgagagcg ctgtgaacaa
      781 attacagggt caaatatcga agatggattc tatgttgaca aagctgagag aaagagatgc
      841 ccagcttttc aagagaatcg ttgccgcaat gcaacatcat gatgccgccg caagccgagt
      901 tttatcaaac gaactagctg agataagaaa agtcacaaag atgctaggaa atgcaagaat
      961 ggcactagaa caggtacagt tacgcctgac tacaatacac gaccttggag atgcaatggt
     1021 tgcaatagca ccagcaatgt ccacaatgaa aggactcaag tcatcccttg gaagattcat
     1081 gccagaagca gattcagagc taaacgccat gacttcaaca ctcaatggtt tgatgatgga
     1141 ttcgttagca ggagatggct tcaatgtaga tacggatgca tcaagcgagg agacagacaa
     1201 aatcctacaa gaagcatctg cagttgcaga acaacaaatt ggcgacagat tcccatcagt
     1261 tccatcaccc tccggcgtat cgtcacaatc aacatacgag tagggaagct cggatgggga
     1321 aactggcgag tacgtcttct ttttatcttc tttaatcact cagaatcttt cttgctatag
     1381 aaaagttgtc tgaccactga gcccatgaaa gcctgcctgt ttgagtgttt tgtctacttg
     1441 gatgatatga acatatgatt gtgtaatttt tgtgtgtaaa agatttgccg tgggaaaatt
     1501 tgataccttt gatttgtaat agtttgcaac aagaatcgta tgcaattttt ccaagacata
     1561 ttatcacctc aacattttct agcaatccaa gttcttctct tagataacca gaacaatttt
     1621 cgagctcact ttttaggggt ttattttgag gtggtgcaca acgaacagca gctgtcacat
     1681 acgtatcttt caactgaaag ccatccccca ttttctgact tgtcggtaat gaagagaaac
     1741 cattttcata gagaactttg gcaagccaat cgccagagct gtctcctgta aacattctgc
     1801 cagttctatt tcctccatgt gctgcaggtg caagaccgat caaaagtagt cttgcttttg
     1861 gatctccaaa accagataat ggtcttcccc agtacttctg atcactgaat ctctttactt
     1921 ttgttttggc tatctgacga atataacgag atagtctggg acatttctta caggatatga
     1981 tcttcttgtt atgtttttca agtttggtgg tcataattag aaataaattt tattaattga
     2041 agcaaatgtg tcttcttgat aggtatattg ttatcatggt ggcaaacaat atcgttatca
     2101 ctggataagg aaattccggc agagacttgt ctggagaaat caactctccc cattttgatg
     2161 gaggtggaat ttcaggaaaa ctttgattag aaatattttg gggccaactg tatgtcttgc
     2221 ttgtctgtgc atcatatact gcgacataaa atccgtacac atcagaactt cctaccactt
     2281 tgataggtat cttaaattca tatgatgcat ggggtattga gctgtaacga tcatgttcat
     2341 ctgaaattcc tccaattgct atcaaactag gatcattctc aattttcata aaataatttg
     2401 ttaacccaag atatccacct ccctgaaacg ttaatgggct attatgtcct agtgcaataa
     2461 aaaaacaata atcgtccttt tgtggagata attctgttgt tttatttgat accatacaaa
     2521 ctacccctga atcagaaaat tttttaaatt gattttctgt gacaaaatcc aaaaaaacat
     2581 acaagttttc acgatcatgg ccggtcttta tggctaattc atttccatca tcaaacttga
     2641 gaatgtcttc gcttgttggt ttccattctt gtaagaaaga ccatttacca tcccaaatta
     2701 tagcatttac acctcctctt aacgtggtaa aaatttgagg ttgggcaaaa gcaagatgcg
     2761 gataaattat catcactatg attaatgcaa taactatctt taacacttga taactagaaa
     2821 aatcagagat taaagtatag ttggcattta cccaatgttc tttttatacc gccagtacaa
     2881 atcaagtaaa gtgaaaaaag gtgctatggt tgcaatagga gttggaatag ctattgcaat
     2941 tgctgttatt cttggtttta cagcaaaaac ggaaaaagag actgcaactc tgaattctac
     3001 cattggtact ccagtatcgt caccaacaac acaaacgcta cctacaacac caccaataat
     3061 caagggaaag aatttctcag tcactctatc tgaaactgtt gcatcaagtg ctcattgacc
     3121 tctaaccaaa taattcaaat ttaatggtaa catgatccat tttggcaatt tagtaagatt
     3181 ttcatttcca aaatggaaaa ttacaatttt tttttataag ttgccctgtt tttgttatta
     3241 tttatgaaat tcgggcaaag cttaattaag taggatgcga tacaacccgt aatgacaaca
     3301 tcgcatcgta acttggctat catcctaatg ggagtaatag ctttgtcgac gagtggagtg
     3361 tattcactta cacaaaatgt gcaaactcag acaaatgcag gtacaactga acaacctgtt
     3421 attctgggcc atattgtcgc cattgtaaaa gatccaaatg gcaacatcaa ggcattcaga
     3481 caaacagaca acttggttgt aagcaatggt ctaaactcaa cagtaaatgc attgtttgga
     3541 gctggaacac aaactctctc ttctggaact tcaccaggta cattcaagta tgtcggagtc
     3601 ggtacgggca gcacagctgt agcttataca gatacaggat tgcaaaccca gagaggactc
     3661 aaacaccttg gtacagttac cgcaattact gcaagtggtg gaacaggtat gggagcccaa
     3721 atcgtagcaa attggggagc aggcattctt gcaaattcat cttcaacatc tactacaatt
     3781 aacgaagcag gactctttga ttcaactgca aacgctacct caagttctaa catgtatgca
     3841 catcaaataa tctcaccagg aatcagtatg ggtacagcag atactcttca ggtaacctgg
     3901 aagataacaa tggcacactc ctaagtctag aaagaggtct atgatgatgg gaacccctct
     3961 ttttgtttat tttcattatt ctataataac gtagatctgt tagattgtca tctgatacaa
     4021 tacgttcttt cttaattaat taccaaaaat ctattaataa ttattagaaa gttctggact
     4081 ggtacatttt ccttcaaggc tttataaaac aactacattt cttggataga tgcctgttac
     4141 aaccaattaa cttgtgatcc ttacaaccac agagaacaca ttttttctcc attctataca
     4201 atgtgaatta ccttaagata agatctctta ttgcaaattt acccgctcag agagtgaatc
     4261 caaaaggatt aggacattca ttgtttcgga ataatatgat atccttgaca gataaagttt
     4321 ccaaattctc tatattctga ctgatcctcc gatgccattc tgtaatccat tttattagaa
     4381 tcagtagaaa tccagaacga gttcacattg catttcacat agttaactga atacagcaat
     4441 gttccatcac ctgtgtacag atcgatgtag atgtctgcag taggttcttg atcaatactt
     4501 tttgctagat tttctattgc ttgatgcata aattgataat attcagcttt atccttactt
     4561 ggcagatcaa ccaattcaac ttgtggtga
//
LOCUS       DASPUS010000110         2045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_607771, whole genome shotgun sequence.
ACCESSION   DASPUS010000110 DASPUS010000000
VERSION     DASPUS010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_607771"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..277)
                     /locus_tag="VEJ68_02420"
     CDS             complement(<1..277)
                     /locus_tag="VEJ68_02420"
                     /inference="COORDINATES: protein motif:HMM:NF024804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HXX05655.1"
                     /translation="MELDDLDRRILKELLNNSNRSYRDLAAELDVAPGTVLKRIKDME
                     TSGIIEGYSIVLDHKKLGSKITAIIELTTSGGKLEEMERKISRLPNIY"
     gene            355..606
                     /locus_tag="VEJ68_02425"
     CDS             355..606
                     /locus_tag="VEJ68_02425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05656.1"
                     /translation="MNTILMSMSTYDTSGRTIRKSHDVYLPIAVAIMLACCFAIIFGL
                     NPQAGGYGGGNNPALFYESAGLMSAGVLIGYLAFVFRAT"
     gene            701..1099
                     /locus_tag="VEJ68_02430"
     CDS             701..1099
                     /locus_tag="VEJ68_02430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05657.1"
                     /translation="MPSEEHQKLLNSLANVLESEGITVTNIDIADTPDLFEDRFRKLP
                     KPTERDGNIPDLEGMKGTLRHIGEVKTKIKGDSILDSQLKSFTNREMNGKEIPLHLAV
                     PKELKKELENKLYKLGLYDKYKKGIIRIWA"
     gene            1191..>2045
                     /locus_tag="VEJ68_02435"
     CDS             1191..>2045
                     /locus_tag="VEJ68_02435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HXX05658.1"
                     /translation="MGLSSEFDPKNIESEVKQQISSLDLEKLIFESPNKTKKIAFIEG
                     PPTMNGTPHAGHLRGRVMKDLWYRYMTLRGFKVIFNAGWDTQGLPVELQAEKELGITG
                     SKSQVVESAGIEKIVLECKKIVHRFNEKWTEADKLLGMSFNQKNAYWTYKDEYIEREW
                     KYLKKAHENKILSEAYKVVAYCPSCQTSLSHAEVNQGYETVQDPSLYYKVKLQDEDLY
                     LIVWTTMPFTLVTDTMVGVNPEENYVHVKVGDETWLVGEKRLEEFVKEARVEEYAVIK
                     KTKGQEFEG"
BASE COUNT          727 a          367 c          401 g          550 t
ORIGIN      
        1 cataaatatt tggaagacgc gagatctttc tttccatctc ctctaatttt cctcccgaag
       61 ttgtaagttc aattattgca gttattttag aaccaagttt cttatggtca agaacaattg
      121 aatacccttc aattatacca ctagtctcca tatcctttat tcgcttcaaa acagttcctg
      181 gtgcaacatc gagttctgct gcaagatcac gataggaccg attagaattg ttcagtaatt
      241 ctttcaagat acgtctgtca agatcgtcaa gttccataaa ataatgaaca tttgtacatt
      301 acttaagtat tattatgaac atttgtgcta atttaatacc ataatcctat atttatgaac
      361 accatactta tgtcaatgtc gacctacgac acgtctggaa gaacaataag aaagagccat
      421 gacgtatacc tgccaatagc agttgccatc atgttggcat gctgctttgc tatcatattc
      481 ggactaaatc cacaagcagg aggttatggc ggtggaaaca atccagccct gttctacgaa
      541 tccgcagggc tgatgtctgc gggtgtgcta ataggctatc tcgcatttgt ttttagagcc
      601 acctagaaaa gttgggggaa aaatcccctc ccacttttat ctgaaaaccc aaatgccata
      661 cgcaaataaa atattagaca tgcttgatgg ttgactagat ttgccatcag aagaacatca
      721 aaaattatta aattccttgg caaatgtttt ggaatctgaa ggcataacag tgacaaatat
      781 cgacattgct gatacgcctg acctctttga ggatagattt agaaaacttc caaaaccaac
      841 cgaaagagac ggaaatattc cagacttgga aggcatgaaa ggcaccctga gacatattgg
      901 cgaggtaaag acaaagatca aaggtgattc tattttagat tcccaattaa agtcatttac
      961 aaacagagag atgaatggta aggaaattcc attacattta gctgtaccaa aagagctaaa
     1021 aaaggaatta gaaaataaat tatacaaact tggactgtac gacaaataca aaaagggcat
     1081 aattaggatc tgggcttaaa ataatcatca aaacaaaccg cattcttcaa ctggcaaggg
     1141 taagtccagt tactaccttt ataaaatcaa tgaatttatc acatctgtaa atggggctat
     1201 caagcgagtt tgatccaaaa aatatagaat cggaagtaaa acagcaaata tcatctttag
     1261 atttagagaa actaatcttc gagtcaccaa ataagacaaa aaaaattgct ttcatcgagg
     1321 gcccacccac gatgaatggc actcctcatg caggacatct cagaggcaga gtaatgaaag
     1381 acctctggta cagatacatg actcttcgcg ggtttaaggt aatattcaat gcaggatggg
     1441 atacgcaagg ccttcctgtt gagcttcaag ctgaaaaaga acttggaatt acaggaagca
     1501 aatcacaggt agtagaatcg gcagggattg aaaaaatagt tttagagtgc aaaaaaattg
     1561 ttcaccgatt taatgagaaa tggactgagg ctgacaaact tttgggcatg tcgtttaacc
     1621 aaaaaaatgc atactggaca tacaaagacg agtatatcga aagagaatgg aagtatctaa
     1681 agaaagctca tgaaaataaa atcttgtcag aggcctacaa ggttgttgca tactgcccga
     1741 gttgtcagac atcacttagt catgcagaag taaaccaagg atatgaaaca gtgcaagatc
     1801 cttctctcta ttacaaagta aaattgcaag atgaagactt gtatctgata gtttggacta
     1861 caatgccctt tacacttgtt actgatacaa tggttggtgt aaatcctgaa gaaaattatg
     1921 ttcatgttaa agttggagat gaaacttggc ttgttggaga aaaacgctta gaagaatttg
     1981 taaaagaagc aagggtagaa gagtatgccg taatcaagaa aacaaagggt caagagtttg
     2041 aagga
//
LOCUS       DASPUS010000111         2028 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_202330, whole genome shotgun sequence.
ACCESSION   DASPUS010000111 DASPUS010000000
VERSION     DASPUS010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2028)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202330"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..292
                     /locus_tag="VEJ68_02440"
     CDS             <1..292
                     /locus_tag="VEJ68_02440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="topoisomerase"
                     /protein_id="HXX05659.1"
                     /translation="VEGKRDEDALKKLGFSGRICQFHSFKGLTRFVDSMPRYKSLILL
                     LDSDRKGSYLTKRIISQLQHRMKIDLSFRQKITAITKGKVRQIENLTLYADL"
     gene            369..1514
                     /gene="dnaG"
                     /locus_tag="VEJ68_02445"
     CDS             369..1514
                     /gene="dnaG"
                     /locus_tag="VEJ68_02445"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase DnaG"
                     /protein_id="HXX05660.1"
                     /translation="MPYSGIVKYHVKLSFDVDGLIEKADIIGAIFGQTEGLLGPEMNL
                     NELQKVSKVGRIEVTTTTTTNQTKGDALIPMSTDINTAALIAAAIESIDKVGPFQAHF
                     KLEAIEDVRSAKKKEIVDRAKQIVQKWSTKTISEGEEMLKDVSDVTSSGKLTTFGKEK
                     LACGSGVFDSPWIILVEGRADVINLLRAGYDNALAIEGARIDESIKSLCEGKSKVVAF
                     LDGDRAGGFILKELKSLVNVDVIHRAPEGVEVEELTPMQIVEILKETAEEMKKETVKP
                     KLQDPKDESIASVAKKVFPDLNESLEAVALDEGTNQVFKVPVSEVVSKLTPGSGIKYL
                     VLDGIITQRLIDSAKQAGIEYVIGHRLANLKSNDGLTLKTFTELGIA"
     gene            1520..>2028
                     /locus_tag="VEJ68_02450"
     CDS             1520..>2028
                     /locus_tag="VEJ68_02450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010193329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF120 domain-containing protein"
                     /protein_id="HXX05661.1"
                     /translation="MPELKLQHILTLAELFVKGARYNFIPVTTSSLGKRIHKSQQAAS
                     KHLLDLESDGYIERLRSGPKVSVRITTKGHAEMSKIFSILKSSLDTSPSYIEFKGTII
                     SGMGEGAYYMSMKGYAKQFKTKLGYVPFPGTLNVKLKDKEFIEAKRSLDAYPAIMVNG
                     FSDGRRTYG"
BASE COUNT          706 a          353 c          447 g          522 t
ORIGIN      
        1 ggtggaagga aagcgagatg aggatgcact gaagaaactt ggattttcag ggaggatatg
       61 tcagttccac agcttcaaag ggctgacaag atttgtggat tccatgccta gatacaagag
      121 tctcatccta ctgctagatt cagacaggaa aggcagctat ttgacaaaga ggattatctc
      181 tcaactgcag caccgcatga aaatagatct ctcatttaga caaaagatta cggccataac
      241 aaagggcaaa gtaagacaga ttgagaattt gaccttgtat gctgatcttt aagggcattt
      301 gaaaactata agcacttata tccgcctttg aagaaactag attgatcaaa aattaagagg
      361 ttaatgattt gccatatagt ggaattgtca agtatcacgt taagctcagc ttcgacgtcg
      421 atggactcat tgaaaaagcg gatatcatag gcgctatttt tggccaaaca gaaggtctgc
      481 ttggtccaga gatgaaccta aatgaacttc agaaagtctc caaagtgggg agaatagagg
      541 ttaccactac gactacgact aatcaaacca agggcgatgc cttgattcca atgagcacag
      601 acatcaatac tgcagctctt attgcagctg caatagagag tatcgataag gtaggtccct
      661 ttcaagcaca cttcaaacta gaagcaatag aagatgttcg ttctgcaaaa aagaaggaga
      721 tagttgatag agcaaaacaa attgtacaaa aatggtccac caaaacaatc agcgagggcg
      781 aagagatgct aaaggatgta tctgacgtaa cgtcttctgg taagctcact acatttggaa
      841 aggaaaaatt agcatgtggt tctggtgtat ttgattcgcc gtggataatt cttgtggaag
      901 gaagagctga tgtcatcaat ctccttagag caggttatga taacgcactt gcaatagaag
      961 gtgcgcgaat agacgaatca attaaatcgc tttgtgaagg aaaaagtaaa gtcgtagcgt
     1021 tccttgatgg tgatagggca ggaggattca tactaaaaga actaaaatct ctggttaacg
     1081 tcgatgtgat tcaccgagca ccagaaggag tagaggttga agagcttacg ccaatgcaga
     1141 tagttgagat actcaaagaa actgcagagg aaatgaagaa ggaaaccgta aagccaaaac
     1201 ttcaagatcc aaaagatgaa tcaatagcaa gtgttgcaaa aaaagtattt cctgatctca
     1261 atgaatctct cgaagctgtg gcacttgatg aaggtacaaa tcaggtcttc aaagtgccag
     1321 taagcgaagt agttagtaaa ctcacgccgg gttctggaat aaagtatctt gttcttgatg
     1381 gaattataac ccagagattg attgattccg caaagcaagc cggaatagaa tatgtaattg
     1441 gacatagact ggcaaatcta aagtcaaatg atggtcttac actcaaaaca tttacagagc
     1501 ttggtattgc ataaaattaa tgccagaact caagttacaa catattttaa ctcttgcaga
     1561 actttttgtc aaaggagctc gttataattt catacctgtg acaacttctt ctcttggcaa
     1621 gaggattcac aagtctcaac aggctgcttc aaaacatctc ttggatctcg aatctgatgg
     1681 ttatattgaa cgacttcgaa gcggtccaaa agtatctgta agaataacaa cgaaaggtca
     1741 tgctgagatg tcaaaaatat tttcaatttt aaaatcaagt cttgatactt ctccatcata
     1801 cattgagttc aaaggtacaa taatttctgg aatgggagag ggtgcatatt acatgtcaat
     1861 gaagggatat gcaaaacaat ttaaaacaaa gctaggttac gttccctttc caggtacact
     1921 taatgtgaaa ttgaaagaca aagaattcat agaagcaaaa cgatcacttg atgcatatcc
     1981 cgcaataatg gtaaatgggt tttcagacgg cagacgtacg tatggatg
//
LOCUS       DASPUS010000112         2753 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1561441, whole genome shotgun sequence.
ACCESSION   DASPUS010000112 DASPUS010000000
VERSION     DASPUS010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2753)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2753
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1561441"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VEJ68_02455"
     CDS             <1..192
                     /locus_tag="VEJ68_02455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HXX05662.1"
                     /translation="EMWRVHQIASKASSKIGEAGLNILNMDAQEETSRIIIVIEDSDD
                     NIEKAIRTIHAERSKITFV"
     gene            complement(513..719)
                     /locus_tag="VEJ68_02460"
     CDS             complement(513..719)
                     /locus_tag="VEJ68_02460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05663.1"
                     /translation="MQYVFSLVAATLLVIGLAGNGYEMRKIRLSTVKDEELASKNIFL
                     NKRNFKWYAIILASLAIWAIGAYT"
     gene            832..1746
                     /locus_tag="VEJ68_02465"
     CDS             832..1746
                     /locus_tag="VEJ68_02465"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010192205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transaminase"
                     /protein_id="HXX05664.1"
                     /translation="MKEQGKIWMNGRLVPFKNAKVHVLTHALHYSTAVFEGIRCYNTT
                     KGSAIFRLQEHVERLFRSAKMYSMKIPYSKDEISNAIIKTIQASKMKECYIRPIAYYS
                     YGVLGLTPTPNKIDVAIACWEWRLGESSAGKVRGARCKVSSWLRIDSRSQPMQAKAAS
                     NYANAALARVEALKDGYDEAIMLNYHGKVSEGSAENIFIVNNGEISTPPLSSGILEGI
                     TRDSVIKIARAEGITVHEREIDREDLYIADEVFMTGTAAEVKSVTEIDNIFIGNGNLG
                     ETTRRLQSAFYEVSRGKDERFTEWLTPI"
     gene            1798..1971
                     /locus_tag="VEJ68_02470"
     CDS             1798..1971
                     /locus_tag="VEJ68_02470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05665.1"
                     /translation="MVLSMTDQHKPKCYLCSNVYENIEELRKHQETVHKDFVEFHKNT
                     TDRSPTPGDVTVF"
     gene            complement(2137..2225)
                     /locus_tag="VEJ68_02475"
     tRNA            complement(join(2137..2172,2188..2225))
                     /locus_tag="VEJ68_02475"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2189..2191),aa:Lys,seq:ctt)
     gene            complement(2280..>2753)
                     /locus_tag="VEJ68_02480"
     CDS             complement(2280..>2753)
                     /locus_tag="VEJ68_02480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HXX05666.1"
                     /translation="MDVKAGMGVGTTFRVIGDFDGKRLEWDCETTEFVPERKIAAKMI
                     KGPFKKWDISVEFQELGEKLTKVTMTVNYEMPFGPLGGILNKIKFAKTAEKGMETALY
                     RVRGLLEGNGSIPVYITLDAYRKLLEEKEKMNNAPVSTVLTKILEKYSQIETVKN"
BASE COUNT          890 a          513 c          533 g          817 t
ORIGIN      
        1 gagatgtggc gagtgcatca aattgcatca aaagctagtt caaagatagg tgaggctggc
       61 cttaacatcc tcaacatgga cgctcaggaa gaaacttcac gtattatcat tgtcatagaa
      121 gacagcgatg acaacataga aaaggcaatt aggactatac atgcagaacg atcaaaaata
      181 acgtttgtgt aattctgaca aagactcgac tagaaaaata ttatttctac tttcttcgtt
      241 ttctgcgagt agctcgttga tctgcttttc gcatgtgttt tccttttttt ctttttgcca
      301 taacgtgtgt taatgattta acgaatacct tttatctctt tagtattagt ggtttaaaga
      361 acatcaaaac attgaccccc cacaagccta tacctgtggt aagtcaaagt gggtttgttc
      421 ttgggcctct tatctagaat cagcccggcg ttacccaaaa cacgcactgt atgtactacg
      481 gcatggaaat atttagagtt gatctatata gatcaagtat aagcccctat agcccaaatt
      541 gcaagagagg caagtattat ggcataccac ttgaagtttc ttttgtttaa gaaaatgttc
      601 tttgaggcca gttcttcatc ctttactgtt gacaaacgta tttttctcat ctcatagccg
      661 tttccagcaa ggccaatgac aagtaaagtc gctgcaacaa gtgagaaaac atattgcata
      721 aaacaagaag ccaatatatg acatttaaag aaattcttcg ccgtacacga tatctttttt
      781 gattagattt tgattaattc tttaaattac caagttctta tcccaatcaa tatgaaagaa
      841 caaggtaaga tatggatgaa tggaagactg gtcccattca agaatgcaaa agtacatgtt
      901 cttactcatg cactacatta ctctacagct gtttttgaag gaattagatg ttataataca
      961 acaaagggtt cggcaatttt cagattgcaa gaacatgttg aaagattatt tagatctgca
     1021 aagatgtatt ctatgaaaat tccgtattca aaagatgaaa tttctaacgc tataataaag
     1081 accatccaag caagcaagat gaaagagtgc tatattagac caatcgccta ctatagttac
     1141 ggcgttcttg gcctaacacc tactcctaac aaaattgatg tcgcaattgc atgttgggaa
     1201 tggaggcttg gagaatctag tgcaggaaaa gtgcgcggag ctagatgtaa agtttcaagc
     1261 tggctcagaa ttgattccag gtctcagccg atgcaagcaa aagcagcatc aaattatgca
     1321 aatgccgcac ttgctagagt agaggcacta aaagacggtt atgatgaagc aataatgtta
     1381 aactatcatg gaaaggtttc tgaaggaagt gcagagaaca tcttcatagt aaataatgga
     1441 gagatctcta cgccacctct gagttctgga atcctagagg ggataacaag agatagtgta
     1501 atcaagattg cacgggcaga aggaatcact gttcatgaaa gggaaatcga tagggaagat
     1561 ctttacatag cagacgaggt tttcatgact ggaactgcag cagaggtcaa atctgtaacg
     1621 gaaatagaca acatcttcat aggaaacgga aacttgggtg aaactacacg aagattacaa
     1681 agtgctttct atgaagtctc tcgaggaaag gatgaacgat tcacagaatg gctcacccca
     1741 atctgattga attttgatcc gtgaaacatt catttacaac aaacaaggat aaaacacatg
     1801 gtactatcta tgacagacca gcacaaacca aagtgttatc tttgtagtaa tgtttatgaa
     1861 aatatagaag aactaagaaa acatcaagaa actgttcata aagactttgt agaatttcat
     1921 aaaaatacaa cagacaggtc tccaactcct ggcgatgtta ctgtatttta gacaagagat
     1981 atggtagtag aggactcgaa acatatttgt tcgttctgta aaaaagggcg gcatgatgaa
     2041 tgcatgaaaa aaatacctac tgatgcaaaa tcggaagggc cgcatgactg cacctttgat
     2101 accaagttaa tagattgtca gtgtcttcat taaaggcggg tctagtggga tttgaaccca
     2161 cggcataggg atgtctctga aatatcataa gagtccctcg ctctacctgg ctgagccata
     2221 gacccgttaa agtagcagac acaaagttcg ttatttaaac ttgagtcaaa aatagtgatt
     2281 tagtttttga ctgtctcgat ttgagaatat ttttccagta tttttgtcaa aactgtagag
     2341 actggagcgt tgttcatctt ttctttttct tctaagagtt tgcgatatgc atcaagagta
     2401 atgtaaacag gaatcgagcc atttccttct aaaagtcctc ttactctgta cagtgctgtt
     2461 tccattccct tttctgcagt ttttgcaaat tttattttat ttaaaattcc acctagagga
     2521 ccaaatggca tttcatagtt tactgtcatg gtaactttgg ttaatttttc tcctagctct
     2581 tgaaattcaa ctgaaatatc ccatttctta aatgggcctt tgatcatttt tgctgcaatc
     2641 ttgcgctctg gcacgaattc tgttgtttca caatcccact ctagtctctt gccatcaaag
     2701 tcaccaatca ctctaaaggt ggtaccaact cccattcctg ctttgacatc cat
//
LOCUS       DASPUS010000113         2748 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1014434, whole genome shotgun sequence.
ACCESSION   DASPUS010000113 DASPUS010000000
VERSION     DASPUS010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2748)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2748
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1014434"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VEJ68_02485"
     CDS             <1..282
                     /locus_tag="VEJ68_02485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007403184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-8X methylmutase"
                     /protein_id="HXX05667.1"
                     /translation="STEMNGGVVAIGNAPTALMEVIQMIRENVTRPALVIGIPVGFVC
                     AVESKEELQTLDIPYITNKGRKGGSPCASAIVNALFKILKEKSETGEFI"
     gene            complement(300..1655)
                     /locus_tag="VEJ68_02490"
     CDS             complement(300..1655)
                     /locus_tag="VEJ68_02490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042242 - cobyrinic acid a,c-diamide
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobyrinate a,c-diamide synthase"
                     /protein_id="HXX05668.1"
                     /translation="MKIPRIVLAGTTSGVGKTSITCAIIYGIKKRGYSVQSFKVGPDF
                     IDPSYLSSVSGRSSRNLDPWLMGITGIVKNFIKNSEADFSVIEGVMGYYDGFSGDSNY
                     SSTHHVASILKTPVILVLDASKTARSIAATALGFVKFHKNSRISGFILNKIGSKKHEE
                     LCRQALSSLDIPILGSIPRNPDLSMESRHLGLIPVSEQIQLQSKISKIAKTMSDFIDI
                     DKIIQIGSKVASFSSVHNEKNSKQKTTIAIALDESFNFYYQDNLDALKKEGATIEYFS
                     PISDSKVPDCDGIYIGGGFPEVLGNALEKNSEMQKNIKNLAEFGRPIYAECGGLMYLT
                     KSIDYGTTKFKMVGLYDATTKMQKKLKINYTRASITEDCLVGRRSKTIQGHEFHFSEL
                     ESISKDSRFAYKLDIGLGIKNQRDGLLQYNTLGSYMHLHFTLPGIARTFVHNCIKQSR
                     R"
     gene            complement(1694..>2748)
                     /locus_tag="VEJ68_02495"
     CDS             complement(1694..>2748)
                     /locus_tag="VEJ68_02495"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008299046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HXX05669.1"
                     /translation="KSFGIPSEFYNPIRNYSFSSTNNHVTITGSDPQAAVLDVRRTYQ
                     FLAYQAASAGADIFVRTNVTDILTEDGKLTGVKATSIKDDLIFRSKLVIDASGFYSVI
                     GKNMGTVQQWKRFGVGAEFEAYVDKIDPETWHLMVGQQYSPAGYAWIFPLGKNRARIG
                     VGVGKPESQIDPTQRLLELIDKKLGPIGNLGRIIPIEFHYGLIPNEGLTHTTIADNLI
                     LVGDAAGQANPLVLEGIRYAIEFGRAAGQVGAEAILKNDTSKESLKPYEENWKKAIGS
                     KIKAAVKVQSKWLALTDEEWDKEIEMIRELSATDFLDFIKADFSMGNLAKLATHHPKL
                     AVRQLFDMVKSIRTEQ"
BASE COUNT          818 a          537 c          471 g          922 t
ORIGIN      
        1 tccacagaaa tgaatggtgg agtagttgca ataggtaatg ccccaacagc attgatggaa
       61 gtaattcaaa tgataagaga aaacgtaaca cggccagctc ttgtgattgg tattcctgtg
      121 ggttttgtat gtgcagttga atcaaaagaa gaacttcaga cacttgatat accatatata
      181 acaaataaag gtcgtaaggg aggaagtcca tgcgcctctg caattgttaa tgcattgttc
      241 aaaattctaa aagagaaatc agaaactggc gaatttatct aaaaaataaa atcccaatcc
      301 tatcttctgg attgtttgat acaattatgg acaaaggttc ttgcaattcc tggtaatgta
      361 aaatgaaggt gcatgtatga accaagtgtg ttatactgta acaagccgtc tctttgattt
      421 tttataccta aaccaatgtc aagtttatag gcaaacctag aatcttttga tattgactct
      481 agctcagaaa agtgaaattc atgaccttga attgtttttg accttcttcc tacaagacaa
      541 tcctctgtta tactagccct ggtatagttt atcttgagtt ttttctgcat ctttgtagta
      601 gcatcataga gtcctaccat tttgaatttt gttgtgccat aatcaataga ttttgtaaga
      661 tacatcaagc ctccacattc tgcataaatt ggtcttccaa actcggcaag attcttgatg
      721 tttttttgca tctcagagtt tttttcaagc gcgttaccta acacttcagg gaagccacct
      781 ccaatgtaaa ttccatcaca gtctggtacc ttcgagtcag atatagggct gaaatactct
      841 atcgtagctc cctctttttt taaggcatcc aaattatctt gatagtagaa attaaacgat
      901 tcatcaagtg caattgcaat tgtggttttc tgttttgaat ttttttcatt atgaacagaa
      961 ctaaaagatg caactttact tccaatttgg atgattttgt caatatctat aaaatcagac
     1021 attgttttag cgatttttga tatctttgat tgaagttgta tttgttcgga gactggaatc
     1081 aaaccaagat gtcttgattc catggaaaga tcaggattac gcggaattga acctaatatc
     1141 gggatatcca atgaagaaag tgcttgtctg catagttctt catgtttttt gctaccaatc
     1201 ttatttagaa taaaaccgga aattctagaa tttttatgaa attttacaaa tccaagagcg
     1261 gttgcagcga ttgatcgtgc tgtcttactt gcatccaaga caagaattac gggagttttt
     1321 aaaatcgatg ccacatgatg agtgcttgaa tagttcgagt cccctgaaaa tccatcataa
     1381 tatcccatca caccctcaat tacagaaaag tcagcttccg aattttttat aaagttttta
     1441 acaattccag taatacccat gagccacggg tccaagtttc ttgaagatct tccagagaca
     1501 gaactaagat agcttggatc tataaaatca ggcccgacct tgaaagattg tacagaatat
     1561 cctctctttt tgattccata tattattgca catgtaatag atgtctttcc aacaccactt
     1621 gtggttcctg caagtacaat tcttggaatc ttcaattcta aacgatatta ctaaatttta
     1681 tttaaattga tgtttactgt tcagtccgga tgctttttac catatcaaag agttgtctta
     1741 cagctaattt tggatgatgc gttgcgagct tggccagatt tcccatgctg aaatcagcct
     1801 ttataaaatc cagaaaatct gtcgctgaaa gttctctaat catttcgatt tccttatccc
     1861 attcttcatc tgtgagagca agccatttgc tttgcacctt tactgccgct tttatcttag
     1921 aacctattgc tttcttccaa ttttcttcat atggctttaa agattctttt gatgtgtcat
     1981 ttttaagaat tgcttctgca cctacctgac ctgcagctct tccaaactct atagcatatc
     2041 ttatcccttc taagacaagt ggatttgctt gacctgcagc atcaccaacc agtatgagat
     2101 tatcagctat ggtagtgtga gtaagccctt catttgggat caatccataa tgaaattcta
     2161 ttggaataat tctacccaaa tttcctatcg gtcctagttt tttgtcaatt agctcaagca
     2221 atctttgagt cggatcaatt tgtgactctg gttttccaac accaacacca attcttgccc
     2281 tgttttttcc taatggaaag atccaagcat atccagcagg agaatattgt tgtccaacca
     2341 tcaaatgcca cgtttcggga tcaatcttat caacataagc ttcaaactct gctccaacac
     2401 caaatctttt ccattgctgt acggtgccca tgttttttcc aataacagag taaaagccgc
     2461 ttgcatcaat tactagtttc gaacgaaaaa tgaggtcatc ttttatcgag gtagccttga
     2521 caccagtcaa ctttccatcc tcagtaagta tgtcagtcac atttgttcta acaaaaatgt
     2581 ctgcaccagc tgatgctgct tgataggcaa gaaattggta agtccttctt acatctaata
     2641 cggcagcttg agggtcagag cctgttatgg ttacatgatt gtttgtagaa ctgaaagaat
     2701 aatttcgaat cggattataa aattcagaag gaattccaaa agattttg
//
LOCUS       DASPUS010000114         6328 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1702844, whole genome shotgun sequence.
ACCESSION   DASPUS010000114 DASPUS010000000
VERSION     DASPUS010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 6328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6328)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6328
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1702844"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..1561)
                     /locus_tag="VEJ68_02500"
     CDS             complement(158..1561)
                     /locus_tag="VEJ68_02500"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008296768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HXX05670.1"
                     /translation="MISAQSVAYYSNQKLSILVIDRNPEPTLGKKTINGWICGDAVGK
                     NTVDYMTERIKISWGNPEIEHPVKGVMAFSPDRETSIPFDGDGYMLNRQQLPKRQLRD
                     AMKMGINMQYSVALRNLLYENGTVVGVEGTSLITNEPFKKTAKIVIDASGVTSMLRNG
                     LSINSKIEKKIDRDDLESTGRHIMKFDQGIENKTDFDPDYCIIHLDQDIAPGGYGWVF
                     PKGKDKVNIGLGVQQKELQKRNQRLGANDDVTKLINDYVKMNKAMKNPRLSDDSSDSV
                     NVTGNWQVSVRRQNDCLVANGYMLVGDAAWMPKPLDAGGIGPAIVAATIIGKNAVEAI
                     ETGDVSERGLWKYNIDFINDYGYKTAGLEIFRRLLQTLTNEQINYGMKHFLSKLDVEA
                     ISKGEHPDFSTVGKLSMMIRGALNKKLAEGLRFTAQQNKLLTEHYYNFPKTPDGYDNW
                     HKILHQILDESYARLVN"
     gene            complement(1796..2218)
                     /locus_tag="VEJ68_02505"
     CDS             complement(1796..2218)
                     /locus_tag="VEJ68_02505"
                     /inference="COORDINATES: protein motif:HMM:NF013994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding domain-containing protein"
                     /protein_id="HXX05671.1"
                     /translation="MQKQLEVTLEIIFHATEDESKIFGPIFDLFQIEENEFTQEKITG
                     YYGNPITLAKTVLTKEKAEDFLRELVSRITKPQIDELLENIDMYFDDSSLFLRIGKND
                     LVRNIISLQQNNAIKIRVKVPIYKKSELVKTYTKLLKV"
     gene            complement(2247..2864)
                     /locus_tag="VEJ68_02510"
     CDS             complement(2247..2864)
                     /locus_tag="VEJ68_02510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3ae"
                     /protein_id="HXX05672.1"
                     /translation="MARQKTTRVKDKWREKKWVTVLAPSAFNSVPIAYLPITSDESAV
                     GRVVEVTLFDIVKGDPSQHQFKLYFQINKVEGETATSIFKRYEYAKEFLRSLVRRGSS
                     LITFMGDFKTKDGYLFRIKIIALTQKKLNTSRKHALRLIARDVMARTIPEMTIDQFIQ
                     ATAFGKINSDILASVKKIIHVRHVGVEKAKLIRTAEAETILLQAK"
     gene            complement(2908..4170)
                     /gene="serS"
                     /locus_tag="VEJ68_02515"
     CDS             complement(2908..4170)
                     /gene="serS"
                     /locus_tag="VEJ68_02515"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HXX05673.1"
                     /translation="MLDPKLIRDNPEKITEMLKARAVDFPLGELVKLDKDRRELIIKT
                     DELRKKKNEISLEIAKKKKSNQDAVDLIQQMQLVSENLHKLEETQIKTEEGYTKLSFT
                     LPNLIDESVPIGKDHTTNKEIRKWGKIPSFDFKVQDHIDLMQNLDLVDLERAAKIAGA
                     RFYFLKNQLVKLNQSLIQFALDFLSEKNYTPIQTPYMINRNSMEGAIIAQDFEDVIYK
                     AEGEDLYLIGTSEHAVVSMHSDEIIEGKSLPIKYAGVSPCFRKEAGAHGRDQKGIFRV
                     HQFEKVEQFVFSRPEESWKEQERMLSIVEEFYQKIELPYRIMLLSSGDMGKVSAKTYD
                     LEAWMAGQNNYREIVSCSNCLDFQARRLKIRFRDKTNEQSQYLHTLNSTLVATTRTMV
                     AIMENFQTKDGHIALPKALQKYVGSSTI"
     gene            complement(4170..4412)
                     /locus_tag="VEJ68_02520"
     CDS             complement(4170..4412)
                     /locus_tag="VEJ68_02520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KEOPS complex subunit Pcc1"
                     /protein_id="HXX05674.1"
                     /translation="MSLECKVQVFLNNISTQKAKAIRKALEPDNVDFPENLSFKIKEE
                     ETRVVFTFEGKGNIRTLISTIDEVLEQTQVILKVTN"
     gene            complement(4375..5793)
                     /locus_tag="VEJ68_02525"
     CDS             complement(4375..5793)
                     /locus_tag="VEJ68_02525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHH family phosphoesterase"
                     /protein_id="HXX05675.1"
                     /translation="MANLDQALSYFHDKVSGCIKSGKNISVITHLDCDGLTSGSIVTK
                     SLIRSGAKCTVRTVNEFNKNLIDKLKNDSRQFHIITDLGGGFAKELDNSLGDDWIIVD
                     HHQIPQEEFDNEKVINAWKYDIDGGLDVSAGGMAYLVSKALHKENIDLAWIAVVAALG
                     DRQDRGEKKSLTGINLEIASSAKKNSQLEIDLDILLVGRETRPLPDALAFTSQPFIEG
                     LTWNRDACLSLLNSSGIKLKEGSRWRVPAELSEDEKRILLQTISKFIPSKNASGIVDE
                     LVGYTYTLVGEDKRSFLRDAREFSTMLNSCGRIRKAGVGVAICMGDRTKMLQEGENIL
                     LEYRTFLRTYMNTLASERWRVTDNGAYILVNGEGLVPENMTGAVSSLLGGSQKNTGKI
                     IILRTNGEEGTIKFSSRKSTGCKSEVNLGLLMRECAAKVSGVGGGHDAAAGARITKDK
                     LDEFLDYLEENVSRMQSSSVSK"
     gene            complement(5793..6242)
                     /locus_tag="VEJ68_02530"
     CDS             complement(5793..6242)
                     /locus_tag="VEJ68_02530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HXX05676.1"
                     /translation="MGRLHSHRHGKSHSIRPVTPSTPTWVKQNPAEIEELVVKYAKDG
                     LRPSEIGIKLRDQHSIPLTRQIVKKTVTEILEQKGVKTDMPEDLNNLVTKALGLQKHL
                     KEHGSDRRNVRSLELLEAKVHRLSSYYKNIGRIPKTWKYKAVIAQLE"
BASE COUNT         1727 a         1295 c          998 g         2308 t
ORIGIN      
        1 gtctacggaa gtctcacctt aataccaaag acacaaaaat ttgtcgattg gacattctat
       61 gatgtatttg ataatactaa gaattactct tttttaatca aagaaccctg gggaacaaac
      121 tcgattccac taaaaattca atggaaatga atgaaatcta gtttacaagt ctcgcataag
      181 attcatctag aatttgatgt aagatcttat gccaattgtc ataaccatct ggggtctttg
      241 ggaaattata gtaatgttct gtcagaagct tgttttgttg tgcagtaaat cttaatccct
      301 cagctaattt cttgtttaat gcgcctctta tcatcatact taattttcct actgtactaa
      361 aatcagggtg ttctccctta ctaattgcct caacatccaa cttggacaaa aagtgtttca
      421 ttccatagtt tatttgttca tttgtaagag tttgaagtaa tcttctgaaa atttcaagcc
      481 ctgctgtctt gtatccataa tcattaataa aatctatatt atatttccac aatcctcgtt
      541 cacttacatc gccagtttct attgcttcta ccgcattttt tccaattatt gttgctgcaa
      601 caattgcggg acctattcct ccagcatcaa gaggttttgg catccatgct gcgtctccta
      661 ccaacatata tccattggca acaagacaat cattttgtct tcttacagag acctgccagt
      721 tacccgttac atttactgaa tcacttgaat catcagagag tctgggattc ttcatagctt
      781 tattcatctt tacataatca ttaatgagtt tagtaacatc atcatttgct cccagtcgtt
      841 gatttctttt ctggagttcc ttttgttgga cccctagacc aatgttgact ttatccttac
      901 ccttgggaaa aacccaccca taacctcctg gtgcaatatc ttgatctagg tgaatgatgc
      961 aataatctgg atcaaaatca gttttgttct caataccctg atcaaatttc attatgtgtc
     1021 ttccagttga ttccaaatca tcacgatcta tctttttttc aatctttgaa ttaattgaga
     1081 gaccattacg tagcattgaa gtgacgcctg acgcatcgat aactatcttt gcagtcttct
     1141 tgaatggttc attagtgatt aggctagttc cctcaactcc aaccacagtt ccattttcat
     1201 acaacaaatt tctcaaagct acagaatatt gcatgtttat tcccatcttc attgcatccc
     1261 gaagttgtcg ttttggaagc tgttgtctgt ttaacatata tccgtctcca tcaaatggga
     1321 ttgaagtttc acggtctggg gaaaatgcca ttactccttt gacagggtgc tctatctctg
     1381 gatttcccca actgatcttt attctttcag tcatatagtc aacagtgttc ttgcctactg
     1441 catctccaca aatccaaccg tttatcgtct tttttcctaa cgtaggttct ggatttctat
     1501 cgatgacaag aatagataat ttctggttgg aataatatgc aactgattgt gcagaaatca
     1561 ttccagctaa gccgcctcct gctactatta tatcataatc cgttttcaca gccaaaaaac
     1621 aggatcaact ctatttaaaa gaacctatga atatagatca ggttttttgg gtcggttcgt
     1681 cgcggcttcc tcacagcaaa tgctcagact ggagcggcaa aattgttacc tcattccctc
     1741 taagtattgg tcgacaaata ctattaaact atgctaggtt tggaaagatt ttcagttaga
     1801 cttttaataa ttttgtatag gttttaacga gttcactttt tttgtaaatt ggaaccttga
     1861 ctctaatctt tattgcatta ttctgttgta aactgattat gtttcttaca agatcattct
     1921 tacctatcct gaggaataga gaagaatcat caaaatacat gtcaatgttt tcaagaagct
     1981 catcaatctg tggttttgta attctggaaa caagttctct tagaaaatcc tctgcttttt
     2041 ccttggtaag tacagtcttt gctaatgtga ttggattgcc ataatatcct gtgatttttt
     2101 cttgcgtgaa ctcgttttcc tctatttgaa acaaatcaaa tattggtcca aaaattttac
     2161 tttcatcttc agtcgcatga aaaattatct caagtgtaac ttctagctgc ttttgcatat
     2221 attgagtacc tatgtgatga ttaaatctat ttggcttgaa gtaagattgt ttccgcttct
     2281 gctgttctta tgagctttgc tttttcaaca cctacatgtc tcacatggat tattttcttg
     2341 acagatgcca agatatcaga attaatcttt ccaaaggccg ttgcttgtat gaattgatct
     2401 attgtcattt caggtatggt ccttgccatt acatctcttg caattaacct caaagcatgt
     2461 tttcttgaag tattcagctt tttctgagtc agggcaataa tcttaattct aaagagataa
     2521 ccatcttttg ttttgaaatc tcccatgaaa gttataaggg aggaaccgcg ccttacaaga
     2581 cttctaagaa actcttttgc gtattcatat cgtttgaaaa ttgaagttgc tgtctcacct
     2641 tctaccttgt ttatctggaa ataaagtttg aattgatgct gagaaggatc acctttgaca
     2701 atatcaaata atgtcacttc gaccactctt cctactgcac tctcatcact agtaatcgga
     2761 agataagcaa taggaacact gttgaatgct gaaggagcaa gaacagttac ccattttttc
     2821 tctctccatt tgtctttgac ccttgtggtc ttttggcgag ccaactaaaa tcaaccttcg
     2881 aatccaaaat ataagttgta cgacatttta gattgtgctt gatccaacgt acttttgtaa
     2941 tgcctttgga agagcaatgt gtccatcttt tgtttggaaa ttttccatta tggcaaccat
     3001 tgttctggta gtagctacta gtgtactatt caaagtgtgg agatattgtg attgttcatt
     3061 ggttttatca cgaaatctta tcttgagtct tcttgcttga aaatcaaggc aatttgaaca
     3121 tgatacgatt tctctatagt tattttgtcc tgccatccat gcttcaagat catatgtttt
     3181 tgcagaaacc tttcccatgt caccacttga aagcaacatt attctatatg gtaactcaat
     3241 tttctgataa aattcttcta caattgaaag cattctctct tgttctttcc acgattcttc
     3301 tggtcttgaa aaaacaaatt gttctacttt ctcaaattga tgaactcgaa atatgccctt
     3361 ttgatctcta ccatgtgccc cagcttcttt tctaaaacac ggactaacac cagcatattt
     3421 gataggtaaa ctcttgcctt caattatctc atctgaatgc attgaaacaa cagcatgttc
     3481 cgatgtaccg attagataga gatcttcccc ctcagccttg tatatgacat cttcaaaatc
     3541 ttgggcaatt attgctcctt ccattgagtt tcggtttatc atataggggg tttgaatagg
     3601 tgtgtaattc ttctcagata aaaaatctaa tgcaaactga attaatgatt ggtttaattt
     3661 cactagttga tttttcagaa aataaaatct agctcctgct atttttgctg ctctttccaa
     3721 atcaacaagg tcaagatttt gcatcaaatc tatgtgatct tgtactttga aatcaaaaga
     3781 tggaatttta ccccattttc tgatttcttt atttgttgta tgatcttttc ctataggtac
     3841 tgactcgtcg atcaaattag gtaatgtgaa agaaagtttt gtatatcctt cctcggtttt
     3901 gatttgtgtt tcttccaatt tatgtagatt ctcggagact agttgcatct gttgaatgag
     3961 atctacagca tcttgatttg atttcttttt ctttgctatt tctaatgata tttcattttt
     4021 cttctttcta agttcatctg tttttataat taattctctt ctatctttat ctaactttac
     4081 cagttcacct aaaggaaaat caacagctct tgctttaagc atctctgtaa ttttctcagg
     4141 attgtctcga attaattttg gatcaagcat taatttgtca ctttaagaat aacttgagtt
     4201 tgttcaagaa cttcatcaat agtagagatc aatgttcgta tatttccttt accttcaaat
     4261 gtaaaaacta ctctagtttc ttcttctttg attttaaaag aaagattttc tggaaaatca
     4321 acattatctg gttcaagggc tttgcgaatt gcctttgctt tttgtgttga aatgttattt
     4381 agaaacactt gaactttgca ttctagagac attttcttcc aaatagtcta ggaattcatc
     4441 caatttgtct tttgtaattc tagctcctgc agcagcatca tgcccaccgc ctaccccgga
     4501 aactttagcg gcgcattctc tcattagtaa tcctaaattc acctcagatt tacagccagt
     4561 tgattttcgt gatgagaatt tgattgttcc ttcttcacca tttgttctga gtatgattat
     4621 cttgcctgta tttttttgtg agcctccaag aagagatgat actgcaccag tcatattttc
     4681 tggcaccaat ccctctccat ttactagaat gtatgctccg ttgtcggtta ctctccatcg
     4741 ttcgctggca agtgtattca tatatgtcct cagaaacgtt ctgtattcaa gtaaaatgtt
     4801 ctcgccttct tgaagcatct ttgttctgtc acccatacaa attgcaacgc cgacgcctgc
     4861 tttgcgaatt ctgccacaag aatttaacat agtagaaaat tctcttgcat ctctcaagaa
     4921 acttctctta tcttctccga ccaatgtgta ggtatatcca acaagttcat ctactatgcc
     4981 acttgcattc ttacttggta tgaatttgga tatagtttga aggagaatcc tcttctcatc
     5041 ctcactgagt tctgctggaa ctctccatct actaccctct tttaacttaa ttccagatga
     5101 atttaacaaa gatagacaag catcacgatt ccaagtaagt ccttctatga agggctgcga
     5161 agtaaaagca agtgcatctg gaagtggtct tgtctctctc cctactagaa gtatgtccaa
     5221 atcaatttca agctgactat tctttttggc actggatgca atttcaagat tgatgccagt
     5281 aagtgatttt ttttcacctc ggtcttgtct gtctccaaga gcagctacta ccgcaatcca
     5341 tgctaaatcg atattttctt tatgaagagc ctttgaaact agatatgcca tacctcctgc
     5401 cgaaacatct aatccaccgt ctatgtcata tttccatgca ttgattactt tctcattatc
     5461 aaactcttct tgcggtatct gatgatgatc aactattatc cagtcatctc ctaacgaatt
     5521 atccagttct tttgcaaatc ctccgcccaa atcggttatg atatgaaact gtcttgaatc
     5581 attttttagt ttatcaatca aattcttgtt aaattcattt actgttcgaa cagtacattt
     5641 ggctccagat ctaataaggg actttgtaac aatacttcca gaagttaatc catcacaatc
     5701 gagatgagtt attactgaaa tattttttcc agatttgatg caacctgata ctttatcatg
     5761 aaaataagat aatgcttgat ccaggttggc cattactcaa gttgagcaat gactgcctta
     5821 tatttccaag ttttggggat acgacctatg ttcttgtaat aagaagatag tctgtgaact
     5881 tttgcctcca gcaattcgag tgatctcaca tttctcctat ccgaaccatg ttcttttaga
     5941 tgcttttgca agcccaatgc ttttgtcact aagttgttaa gatcttctgg catgtctgtc
     6001 tttactcctt tctgctccaa gatttcggtc accgtctttt ttacgatctg ccttgtaagc
     6061 ggaattgaat gctgatctct cagttttatt ccaatctcac ttggtcttaa gccatctttt
     6121 gcatatttta ctacaagttc ctctatctct gcaggattct gttttaccca cgttggcgta
     6181 ctgggagtaa caggtcttat cgaatgagat ttgccatgtc tgtgtgaatg aagtcgaccc
     6241 acgagccgct tgctttttaa ggaaacataa atgtttactt gaaatactag atcttgccat
     6301 tacaaaaaag ttaaatagca acgcaagt
//
LOCUS       DASPUS010000115         2521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1426003, whole genome shotgun sequence.
ACCESSION   DASPUS010000115 DASPUS010000000
VERSION     DASPUS010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2521)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2521
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1426003"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1033)
                     /locus_tag="VEJ68_02535"
     CDS             complement(<1..1033)
                     /locus_tag="VEJ68_02535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine(34) 5-carboxymethylaminomethyl
                     modification radical SAM/GNAT enzyme Elp3"
                     /protein_id="HXX05677.1"
                     /translation="MQRAEVKFENACKEISQNLLNITNPSNKDVKREIKRICTKYSLE
                     RIPRNYEILALVDGSNFERLQKALVRKPVKTASGVAVIALMPKPYACPHGRCTYCPGG
                     VEFNTPNSYTGREPSTQNAISNDYDPKKQIIDKLDHLMTYGHDNTKLELVIVGGTFLF
                     MPLDYQVSFVKSCFDALNGFVSPNLELAKKNNETAKIRNVGFTIETKPDYCKSQHVDW
                     MLEYGITRVEIGVQSLHERVYEIVNRGHTYNDVVESFQIAKDAGYKIVAHMMPGLPTI
                     TPDEDIVDFKKLFAESDLKPDMLKIYPTLVLENTSIYDSYKTGKFTPYSQEEMIHVLT
                     EVKKTIPRWT"
     gene            1227..1451
                     /locus_tag="VEJ68_02540"
     CDS             1227..1451
                     /locus_tag="VEJ68_02540"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HXX05678.1"
                     /translation="MTIGYLAIHCDTGKESQVFDKILQIPNVKEADIVLGLYDVICKI
                     ESGSTKELENTVMKIRKISHVQTTMTLIVF"
     gene            complement(1455..2477)
                     /gene="purM"
                     /locus_tag="VEJ68_02545"
     CDS             complement(1455..2477)
                     /gene="purM"
                     /locus_tag="VEJ68_02545"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HXX05679.1"
                     /translation="MGVTYKDAGIDIKKIKRSQATIGRLISSTHRLQKKINVMSGFGH
                     YAGIVEIADGKLLATHTDGVGTKVIIAQMMKRYDTVGVDCVAMNVNDIICTGAVPISF
                     VDYIAANRNDQESFKQIVRGLVKGAKKSMVPIVGGETAILPDLISGKNFSFDLAGMVV
                     GILSKRDLILGDMITPGDIIIGVKSNGLHSNGYSLARKVLLSKYALRSKIKGLGVLGD
                     ALLEPTEIYVQPVLQAIRECDIHGLAHITGGSFTKLLRLKKTGYMLDNLPEPPAIFQL
                     IENQDVKKEEMYKTFNMGIGFCLVVPEEEEERVDEIFKKHCMTARQIGKIIDKKGVYI
                     ESLKIA"
BASE COUNT          709 a          520 c          437 g          855 t
ORIGIN      
        1 ttgtccacct aggaattgtc ttttttactt ctgtaagcac atgtatcatt tcttcttgtg
       61 aatatggtgt gaacttgcct gttttgtacg aatcgtaaat acttgtattt tcaagcacta
      121 gggtagggta tatctttaac atatctggtt tgaggtctga ttcagcaaat aattttttga
      181 aatccacaat atcctcatct ggcgttatgg tgggaagacc aggcatcata tgagctacta
      241 tcttgtaacc tgcatctttt gcaatctgaa aagattccac gacatcattg tacgtatgac
      301 ctctgttaac aatttcataa actctttcat gaagactttg tacgccaatc tcaactcgtg
      361 ttattccata ttcgagcatc caatccacat gttgactttt acaatagtcc ggtttagttt
      421 cgattgtaaa tccaacattt cttattttgg cagtctcatt atttttcttg gctaattcca
      481 aatttggtga tacaaaacca ttcagtgcat caaaacatga tttgacaaaa gatacttggt
      541 aatccagagg catgaaaaga aacgtacctc ccactattac taattcaagt ttggtattat
      601 catggccata agtcatcaag tgatcaagct tgtcgatgat ctgtttcttt ggatcataat
      661 catttgaaat tgcattttgt gtagacggct ctcttccagt gtagctattc ggggtattaa
      721 attccacacc tcctggacag taggtgcatc tgccatgagg acacgcatat ggctttggca
      781 tcaaagcaat caccgcaact ccagatgctg tcttgacggg ttttctcact aatgcctttt
      841 ggagtctttc aaaattagaa ccatctacca aagccagtat ctcgtaattc ctcggtattc
      901 gttcaaggga atacttagta cagatacgct tgatctctct ctttacatcc ttgtttgatg
      961 gatttgttat atttagaagg ttctgtgaga tttccttaca agcattctcg aattttactt
     1021 ctgcccgttg cacatcatgt tagaacaagt ttgggtatta aatcctaatc tggcaagatt
     1081 ctcaagaatc gaatttagac attttatctg gctacaaatt gatgtaatga gaattaattc
     1141 acacttaaaa tcaagtcctt ctgcgtgact taaacaaaag cctttttggt gattactact
     1201 cttctcatct taagagctat gattcaatga caatagggta cctggcaatt cactgtgaca
     1261 caggaaaaga gtcacaggta tttgataaga tattgcaaat ccccaatgta aaagaagcag
     1321 acattgttct tgggctttat gatgtcatct gcaaaataga gagtggaagt acaaaagaac
     1381 tagagaatac cgttatgaag ataagaaaga tctcgcatgt acagacaacg atgacattaa
     1441 ttgttttcta gcactcatgc tatttttaga gactctatgt agactccctt cttatctatt
     1501 atttttccga tctgccttgc tgtcatgcaa tgttttttga agatttcatc tactctctct
     1561 tcttcttctt ctggcacaac tagacaaaag ccaattccca tattgaatgt cttgtacatc
     1621 tcttcttttt tgacatcttg attttctatt aactgaaata tcgccggtgg ctctggtaga
     1681 ttatcaagca tatacccagt cttttttagg cgcaataatt tggtaaaaga gccaccggtt
     1741 atatgtgcaa gaccatgaat atcgcattct cttattgctt gaagaacagg ttgaacataa
     1801 atttcggttg gttccaaaag tgcatctcct aagactccta gaccttttat tttactacgc
     1861 aatgcatatt ttgaaagcaa gaccttccta gcaagtgaat aaccgtttga atgcaaccca
     1921 ttacttttca cgccaattat tatatcgcca ggagtaatca tatcgccaag tattaggtct
     1981 cgtttgctta gaattccaac caccattcca gccaaatcaa atgagaagtt ttttcctgat
     2041 atcaaatcag gaagaatggc ggtttcgccg ccaactattg ggaccatgga ttttttggct
     2101 ccttttacta gtccacggac gatttgtttg aaagactctt ggtcgtttct atttgcagca
     2161 atgtaatcta caaaagaaat tggaacggca cctgtgcaaa taatgtcatt tacgttcatg
     2221 gcaacacaat caactcccac agtgtcatat cgcttcatca tctgtgcaat gatcaccttt
     2281 gtccccactc catcagtatg tgtggccaat agctttccat cggcaatttc tacgatacct
     2341 gcatagtgcc caaaacctga cattacattg atcttctttt gtaatctgtg agttgacgaa
     2401 atcagtcttc caatggttgc ttggctacgc tttatttttt tgatatcaat tcctgcgtcc
     2461 ttgtaggtga ctcccaatga atctgctcca tctgatcgag ataaaagaat tttgtatgct
     2521 a
//
LOCUS       DASPUS010000116         2003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1014937, whole genome shotgun sequence.
ACCESSION   DASPUS010000116 DASPUS010000000
VERSION     DASPUS010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2003)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1014937"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..436)
                     /locus_tag="VEJ68_02550"
     CDS             complement(<1..436)
                     /locus_tag="VEJ68_02550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002735881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2252 family protein"
                     /protein_id="HXX05680.1"
                     /translation="MESKILNREEKIQQGKTLRENCPRTKHADWNPSLRKWEPITLLE
                     NSNIDRIPGLVAIRYQRMSESPFTFFRGSAIIQARDLVNSAVSGITVQLCGDCHLLNF
                     GGFATPERALVFDINDFDETFPGPWEWDIKRLVVSFVLAAREL"
     gene            655..942
                     /locus_tag="VEJ68_02555"
     CDS             655..942
                     /locus_tag="VEJ68_02555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05681.1"
                     /translation="MKRTVFIIVIIVCSTFFITFLTIDEELVKDRPLQQVYEAALLAV
                     ILGIIGVIASKYYGDVTANDTIRELTKVLSELERKIQNLESRFDELQNSLK"
     gene            complement(986..>2003)
                     /locus_tag="VEJ68_02560"
     CDS             complement(986..>2003)
                     /locus_tag="VEJ68_02560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05682.1"
                     /translation="LNAWYRYDNTPLKMSLEKFAKFPIATSREANQPRLLLVTVDVME
                     SLPVVFDSYAKENGTRESGYGKLIVEDNDKDSKNKKTIGFEHVIKYPKGITADHVIAS
                     AAVPINFDYSKIETDRYDYKTMSYKKETRYFWDGGILANTPLMQVVQAHRQYWYYEKH
                     VKGEIPKLDIVMVNLHPARVNMIPWDHDGAVNRNFDISLGDRSKNDETIILIFQMYTD
                     LIKDLIRMAKDNGATQKMIDDLLDRSVLTQERMEGVRGTIYRDAVDGAFNMGDIMRIQ
                     RKHDEYSISNKIFDFSANTIKNLMQDGYNDLVEQAIKWFGIEQIKESGIIFDKDNNPI
                     WNKS"
BASE COUNT          574 a          378 c          323 g          728 t
ORIGIN      
        1 ctagctctct tgcagcaaga acaaaactta ctacaagtcg tttgatatcc cattcccaag
       61 gtccaggaaa agtttcatca aaatcattga tatcaaaaac tagggccctc tcaggtgtgg
      121 caaatcctcc aaagttcaat aaatgacaat caccacatag ctgaactgtt atccctgaca
      181 cggctgagtt taccaagtct cttgcttgga tgattgcaga acccctgaag aatgtgaaag
      241 gtgattctga catcctttga tatcttattg ctacaagacc tggaattcgg tctatattgg
      301 aattttctaa taatgtaatt ggttcccatt ttcgcaaaga gggattccag tctgcatgtt
      361 tagtgcgtgg gcagttttct cgaagagttt ttccttgttg gattttttct tctctattga
      421 ggattttact ttccatgcct aaggatattg agtcggactt tctttttact ttttatctag
      481 aatcttacag ttcatgaact aactgtcaat ttgagcacta aacgactgta cgaattagat
      541 ggatttaatt tattttcaaa ttttttccct tttttactgg tcaaattaat ctactctagt
      601 agtaattatc gatagtcaaa aatgtgtaaa attcgttaat ttcaatcatg atttgtgaaa
      661 agaaccgttt tcataatagt cattattgta tgctctactt ttttcataac ttttcttacc
      721 attgatgagg agttggttaa agaccgtcca ttgcaacaag tctatgaagc ggcactactt
      781 gccgtaatat tgggaattat cggtgttata gccagtaaat actatggtga tgtgacagca
      841 aatgatacga taagggaatt aacaaaagtc ttatctgagt tagagagaaa aattcaaaat
      901 ttagaatcta gatttgatga attacaaaat agcttgaaat gattataaac aaacgttaga
      961 ataatttttt ctaattttat acctgttatg atttattcca aattggatta ttgtctttat
     1021 caaatatgat tcccgattcc ttgatctgct ctattccaaa ccactttatg gcctgttcaa
     1081 ccagatcatt gtatccatcc tgcatgagat tttttattgt attggcagaa aaatcaaaaa
     1141 ttttgttcga gattgaatat tcatcatgtt ttctttgtat tcgcatgatg tctcccatgt
     1201 taaatgctcc atccaccgca tcacgataaa ttgttcctct aactccttcc attcgctctt
     1261 gagtaagcac tgatctgtca agcaagtcat cgatcatctt ctgggttgct ccattatcct
     1321 ttgccatacg gattaaatct tttatcaaat ctgtatacat ttgaaaaatt agtattatag
     1381 tttcatcatt tttagatcta tcacctaaag agatgtcaaa gtttctgttc actgcaccat
     1441 catgatccca tggaatcatg ttaactcttg ctggatgcag gtttaccata actatgtcaa
     1501 gctttggaat ttcgcctttg acatgctttt cataatacca atactgtcta tgagcttgaa
     1561 cgacttgcat taatggtgta tttgctagaa ttcctccatc ccagaaatat ctggtctctt
     1621 ttttgtagct cattgtttta tagtcgtacc tatctgtctc gattttacta taatcaaaat
     1681 ttatgggaac tgctgcactt gcaatgacat gatcagcggt gattcctttt gggtatttta
     1741 taacatgttc aaatccaatt gtttttttat tcttagaatc cttgtcatta tcttctacta
     1801 tcagttttcc atatcctgat tccctagtgc cattttcttt ggcataactg tcaaaaacta
     1861 ctggcaggct ttccattaca tctaccgtaa ccaaaagcaa tctgggttga ttggcctcac
     1921 gactagtagc aataggaaat ttggcaaatt tctctaaact catctttaga ggggtattat
     1981 cataacgata ccatgcattt agg
//
LOCUS       DASPUS010000117         2973 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1704432, whole genome shotgun sequence.
ACCESSION   DASPUS010000117 DASPUS010000000
VERSION     DASPUS010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2973)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2973
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1704432"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(199..537)
                     /locus_tag="VEJ68_02565"
     CDS             complement(199..537)
                     /locus_tag="VEJ68_02565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05683.1"
                     /translation="MNRRGGIITGIILAASSAFVFFFLGFPSLTQQPDQPSPFNAQNP
                     DTVSTLASDIDSCVSNPSSDCDQEMIQISKYCLQNKDQNVSFCSDPRVPAYLSNRGLT
                     LPPVNGGANP"
     gene            complement(579..977)
                     /locus_tag="VEJ68_02570"
     CDS             complement(579..977)
                     /locus_tag="VEJ68_02570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05684.1"
                     /translation="MKSWIAFLLVISVVSTTIPLAHAQVPVGVSTKFQNGVWVVPVNK
                     QVQITADVSNGQERDQPFAYLVQVKDQNDIVVQLSWLTGTLTPGQSLNPSQSWTPTNQ
                     GSYTAEIFVWNSISNPDALSPPLVMNISVT"
     gene            complement(999..1235)
                     /locus_tag="VEJ68_02575"
     CDS             complement(999..1235)
                     /locus_tag="VEJ68_02575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 domain-containing protein"
                     /protein_id="HXX05685.1"
                     /translation="MFYKVSVSFHRDFIEVNEDQIQVGVMSKPVKGEANAEVVKKIAK
                     KFGTSKSNVKIVSGEKSRNKIVEITIGSVTNPKK"
     gene            1286..1519
                     /locus_tag="VEJ68_02580"
     CDS             1286..1519
                     /locus_tag="VEJ68_02580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05686.1"
                     /translation="MAENEEDLERLKLLNIVFLKGTPGLSRIELERLQYLLEKKDYGN
                     DTKAQKSKKKLLKKISVAIYDYDEKYGNSFKTS"
     gene            1535..2032
                     /locus_tag="VEJ68_02585"
     CDS             1535..2032
                     /locus_tag="VEJ68_02585"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HXX05687.1"
                     /translation="MFNGFISSILHDALFIKYGLLGLFFNGMFSSFIPIPTELTISAL
                     LLGGANPIDVFLVLISSSIIGGYIAYYLGYNGRLLKKIRKTPEKKYEQKSVSIMTKYG
                     WSTIIFFSPWIPIVGDVVSIVAGTKKYNIVKYTIAMTTGKTVKAVAVVFFSVHFVHWL
                     VSILR"
     gene            2072..>2973
                     /locus_tag="VEJ68_02590"
     CDS             2072..>2973
                     /locus_tag="VEJ68_02590"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M1 family metallopeptidase"
                     /protein_id="HXX05688.1"
                     /translation="MKNVFPINYDLEIEPDFDKFKFLGKEKILIQTKLTNKIVLNSAE
                     LDIKNCQIVINERTIRPKVRLDSKNEELILSLPEKISGKAVLLIDFVGTLNDKLVGFY
                     RSKYEYKGKERHLATTQFEAADARRAFPCWDKPAAKATFDISLLVDSNLTAISNMPVI
                     NKKRLGKKTLYRFDRTPVMSTYLLYLGVGDFEYIQSKLGKTTIRVVTTRGKKEQGKMS
                     LEFTKQFLAYFQNYFKIAYPLPKLDMIAIPDFAAGAMENWGAITFRETVLLYDPKTSS
                     TDTLQHIAEVIAHEIAHQWFGNLVT"
BASE COUNT          972 a          537 c          567 g          897 t
ORIGIN      
        1 attcaaaact aataagggct acacttccca ttgcagacga gaacagcaga ttatcacatg
       61 tcctgttgtt atcatttgac gcagatgcag acaatttcca tcaaataatt acaaagaaga
      121 taattccact tgtcagacaa cacatggcag actttgaaaa aataaccgga aaataaacag
      181 taatctttcc cttgaacttt atgggttggc tccaccattt accggtggta acgtaagtcc
      241 cctgttgcta agataagctg gaaccctggg atctgaacaa aatgagacgt tctggtcttt
      301 gttttgtaga caatattttg atatctgtat catctcttgg tcacaatctg agcttggatt
      361 tgaaacacat gaatcgatat cgcttgcaag tgtgctcaca gtgtctgggt tttgggcatt
      421 aaatggcgat ggctgatctg gttgttgtgt aagagaggga aaacccaaga aaaagaatac
      481 aaatgcagac gaggcggcaa gtatgattcc agtaattatt cctccacgcc tgttcatgga
      541 ataacttttg cagcctcaaa ttaataatcg atacggaact atgttactga gatattcatt
      601 acgagtgggg gcgataatgc atccggattg ctgatactgt tccatacaaa gatctcagct
      661 gtatagcttc cctgatttgt tggagtccac gactgtgatg gattcaaaga ttgtccaggt
      721 gttagtgttc cagtaagcca tgataactgt accactatat cattttggtc tttaacctga
      781 acaaggtatg caaatggttg gtctctttct tgaccattac ttacgtcagc agtaatctgt
      841 acttgtttat tcactggcac tacccacacg ccattttgaa atttagtgga aacacccaca
      901 ggaacttgag cgtgtgctaa tggtattgtt gttgatacca cagatattac aagcagaaaa
      961 gctatccatg atttcattaa caatattttt cttttttcct attttttagg gtttgtaaca
     1021 gagccaatag ttatctctac tattttgttt cgtgattttt ctcctgaaac gattttgacg
     1081 tttgattttg aggtgccaaa tttcttggca atttttttta caacctcagc attggcctct
     1141 ccctttactg gttttgacat tacgcccact tgtatttggt cctcattgac ttctatgaaa
     1201 tccctatgaa atgaaacaga taccttgtag aacaataaag aactagattt acaagacaaa
     1261 tattaaacat cttagaagtt ctcttatggc cgaaaatgaa gaagatcttg aacgcttaaa
     1321 gctgttaaac atcgtatttt taaagggaac cccggggctt tcacgaatag aattagaacg
     1381 tcttcaatac cttcttgaga aaaaagatta tggtaatgat acaaaagcac aaaaatcaaa
     1441 gaaaaagcta ctcaagaaaa tttctgttgc gatttatgat tacgacgaaa aatatggcaa
     1501 ttcatttaaa acaagctaga agggaattca ggcaatgttc aatggtttca taagctcaat
     1561 tcttcacgat gctttgttta taaaatacgg tcttttaggg ctgtttttta atggaatgtt
     1621 ctcaagtttt attccaatcc cgacagagct taccatctca gctttacttt tgggaggagc
     1681 aaatccaatc gatgtttttt tggtattgat aagtagctcc atcattggag gctacattgc
     1741 atattatctc ggatataacg gaagattact aaaaaaaata cgcaaaacac ctgaaaaaaa
     1801 atacgagcag aaaagtgtga gtatcatgac caagtatggc tggtctacaa taattttctt
     1861 ctctccctgg attcctattg ttggagatgt agtatcaatt gtagctggca cgaaaaaata
     1921 caatattgta aaatatacta ttgcaatgac caccggtaag acggtaaaag cagttgctgt
     1981 tgtatttttt agtgttcatt ttgtgcattg gttagttagc attcttcgat agttcaaagg
     2041 tatattactc gtttatttga atcaaaatat tatgaaaaat gtttttccaa tcaattatga
     2101 tctggaaata gaaccagact ttgacaaatt caagtttcta ggaaaagaaa agatcctcat
     2161 acagacaaaa ctcacaaata agatagtact aaactcagca gaacttgata tcaagaattg
     2221 ccagatagtt atcaatgaaa ggaccattag gcccaaggta agactagact ctaaaaatga
     2281 ggagttgatt ctctcgctgc ctgaaaagat ctcaggaaaa gcagtacttt tgattgattt
     2341 tgtaggaaca ttaaatgaca aacttgttgg attttacagg agcaagtacg agtacaaggg
     2401 aaaagagaga catcttgcca cgacacagtt tgaggcagca gatgcaagaa gagcatttcc
     2461 ttgctgggac aagcctgcag caaaagcaac ctttgatatt tcgttactag ttgacagcaa
     2521 tcttactgca atctcaaaca tgccagtaat taacaaaaaa cgactaggca aaaaaactct
     2581 ttacagattt gacaggacac ctgtgatgtc aacctatctt ctctatcttg gtgtgggtga
     2641 ttttgagtat atccagagta agctaggaaa gacaacgatt agagtagtta caacaagagg
     2701 aaaaaaagaa caaggaaaaa tgtcgctaga gtttacaaaa caattcttgg catactttca
     2761 gaattatttc aagattgcat atcctttacc aaagcttgac atgattgcaa ttccagactt
     2821 tgcagccggt gcaatggaaa actggggcgc aatcacattc agagagaccg tattgctata
     2881 tgacccaaag acatcgtcaa cagatacact tcaacatatt gccgaagtaa tagcacatga
     2941 gattgcacat cagtggtttg gaaatcttgt tac
//
LOCUS       DASPUS010000118         2273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_57975, whole genome shotgun sequence.
ACCESSION   DASPUS010000118 DASPUS010000000
VERSION     DASPUS010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57975"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            56..355
                     /locus_tag="VEJ68_02595"
     CDS             56..355
                     /locus_tag="VEJ68_02595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016939535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HXX05689.1"
                     /translation="MQDPYAKRLLWFIFMGSKGGLNRIRIISTIRKNPLNANQLAKEL
                     GLDYKAIQHHMGVLEKNNLVSRVGDKYGVTYFISTFLEVNLAAFDEIVMKLEKSK"
     gene            382..666
                     /locus_tag="VEJ68_02600"
     CDS             382..666
                     /locus_tag="VEJ68_02600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010190678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05690.1"
                     /translation="MEPLMQASAAVSGLNMIVLGILIGVFTKIYSKTKAQLPLGMIFF
                     AGLLFLHNVIGVYAYFSMMDLYAGALLPYLLAVHVAELAGIIILLKITLQ"
     gene            702..1154
                     /locus_tag="VEJ68_02605"
     CDS             702..1154
                     /locus_tag="VEJ68_02605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05691.1"
                     /translation="MRQQYKEYLKLNKNILLGFCASIIISAIVAQYLSGQQNYVNATL
                     TLVVDYVVYFSTFGALFYIDNRKKYLLESGQVDKSSLKTDLVKVVSSLGIGEIIYTIC
                     RWSLQYYLLTNSYHAYLASLIAQSISTCIYMITVNMSVKLMRLYKDDT"
     gene            1144..1500
                     /locus_tag="VEJ68_02610"
     CDS             1144..1500
                     /locus_tag="VEJ68_02610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase H family protein"
                     /protein_id="HXX05692.1"
                     /translation="MTLSIFVDGSGGPESGYGFFVKETGESYYKKEPNITNNQAEYLA
                     IISVLKKFSDSLDEITIYSDSKNTVSQLNHEFAINNSQLRNFAMEAWELVAKYKNLKI
                     RWIPRAENLAGKMLGS"
     gene            1566..>2273
                     /locus_tag="VEJ68_02615"
     CDS             1566..>2273
                     /locus_tag="VEJ68_02615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HXX05693.1"
                     /translation="MTDSSFLSPKSIAIIGASDKEGSVGRAITSNILKGYTGKIFPIS
                     PTRETVFDKKAYKSVLDVTEEIDIAVIVTKNDVVPSVLEECGKKGIKGAIVITAGFKE
                     VNEEGAKLEKQLAEISKQYGIRIIGPNCLGVMNLAPQTMMNSTFLKVTPKSGGIALVS
                     QSGAICAALVEDASAQGIGFSAVISMGNKVDLNEVDMLKMLAEHEQTKVIVMYLEDMT
                     NGREFLRVCKQITRLNKV"
BASE COUNT          811 a          343 c          427 g          692 t
ORIGIN      
        1 ttgctgccaa aaaacatgag atgttttaat taatcggaaa tatgcgaatt attcaatgca
       61 agatccgtat gcgaaacgtc ttctttggtt catattcatg ggctctaagg gaggtctaaa
      121 taggatacga ataatctcta ctataagaaa aaacccattg aatgcaaatc aactggccaa
      181 ggagctggga ttagactaca aggcgataca acatcatatg ggagtacttg aaaagaataa
      241 tcttgtttct agagtgggag acaagtatgg tgtaacatac ttcatttcta cctttttaga
      301 agtaaatttg gctgcttttg atgaaattgt tatgaaattg gaaaaaagta aataagcttt
      361 gacagattga aattctttta aatggaacca ctaatgcagg caagtgcagc tgtttccgga
      421 ctaaatatga tagttctggg aatactcatt ggagttttta caaaaatata ttcaaaaaca
      481 aaagcacagc ttccattagg aatgatattt tttgcaggat tactttttct acataatgtt
      541 attggagtct atgcttactt ttcaatgatg gatctttatg ctggagcact cttaccttat
      601 ctattagctg tacatgtagc tgagcttgct ggaattataa tactgctcaa gataacatta
      661 caatagattt agtttatttg tcagtataga aaaatcagca tatgagacaa caatacaaag
      721 aatatctcaa gcttaacaaa aacatcttac ttggattttg tgcgtcaatt attatttctg
      781 caattgttgc tcagtatctc tcaggacaac aaaattatgt aaatgctaca ttgacgctag
      841 ttgtagatta tgtagtatac ttttctactt ttggtgcttt attttatatt gataacagga
      901 aaaaatatct tcttgaatca ggacaagtgg ataaatcaag tctcaaaact gatctagtaa
      961 aagtagtttc atcgctggga ataggagaaa ttatttatac catttgtagg tggtcattac
     1021 aatattatct attaacaaat tcttatcatg catatcttgc ttctcttatt gcccaatcca
     1081 tttcaacttg catctatatg ataacagtga atatgagcgt caaactgatg aggttgtata
     1141 aagatgacac ttagcatatt tgtagatggt tcaggcggcc ctgaaagtgg atacggattt
     1201 tttgtaaaag aaacaggtga atcatactac aaaaaagaac caaatataac aaataaccag
     1261 gcagaatatc ttgcaataat ctctgtttta aaaaaatttt ccgattcctt agacgaaata
     1321 acgatttaca gtgattctaa aaatacagta tctcaactaa accacgaatt tgctataaac
     1381 aatagtcaac ttcgaaactt tgcgatggaa gcatgggaac ttgttgcaaa atataaaaat
     1441 ctgaagataa gatggattcc aagagcggag aatttagcag gaaaaatgct aggtagctag
     1501 caaattaatt tggtccagct cggataaact tattatacaa atcaatttga agcaatttca
     1561 ttaaaatgac tgattctagt tttctttctc caaaatcaat tgcaataatc ggggcttctg
     1621 ataaggaagg tagtgtaggt cgtgcaatta catcaaacat attgaaagga tatactggta
     1681 aaatttttcc aataagtcct actagagaaa cggtctttga taaaaaagcc tacaaaagcg
     1741 tacttgatgt aacagaagaa attgatattg cagttatagt gaccaaaaat gatgttgttc
     1801 catccgtgct cgaggaatgt ggaaaaaaag gaatcaaagg tgctattgta atcactgcag
     1861 gatttaaaga agtaaatgaa gaaggagcaa aacttgagaa acagcttgct gaaatctcaa
     1921 aacaatatgg aattaggata attggaccaa actgtcttgg tgtgatgaat cttgctccgc
     1981 aaacaatgat gaattctact tttctgaaag ttacaccaaa gtctggtgga atcgcactag
     2041 tatcacaaag tggagcaatc tgtgccgcgt tggtagaaga tgctagtgca caaggaattg
     2101 gcttttccgc tgtaattagc atgggaaaca aagtagacct taacgaagtt gatatgctca
     2161 aaatgttagc agagcatgag cagaccaaag ttatagtcat gtatcttgaa gacatgacaa
     2221 atggcagaga atttcttaga gtatgtaaac agataactag actaaataaa gta
//
LOCUS       DASPUS010000119         6974 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_891746, whole genome shotgun sequence.
ACCESSION   DASPUS010000119 DASPUS010000000
VERSION     DASPUS010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 6974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6974)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6974
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_891746"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="VEJ68_02620"
     CDS             complement(<1..205)
                     /locus_tag="VEJ68_02620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05694.1"
                     /translation="MSEDQIKLIQSLIESGNGDIDRLRTILDTLQKGNQLDENDQNYL
                     HTLSNQSPADELETTNSSLEKTSS"
     gene            286..717
                     /locus_tag="VEJ68_02625"
     CDS             286..717
                     /locus_tag="VEJ68_02625"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HXX05695.1"
                     /translation="MPKVKVEKIIKANREKIFNLVTDFENLPQRFPQFFKSVKVVSRE
                     GNVITTEDHAVMAGREMQQTAKHILTPPEIDEVHLLSGDAKDSHIVTKYENVPEGTKI
                     TVEGDFKLAGKLKLVGFMAKGKIEKGIEQVMQEFAKVAESP"
     gene            791..961
                     /locus_tag="VEJ68_02630"
     CDS             791..961
                     /locus_tag="VEJ68_02630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05696.1"
                     /translation="MTSIKSVIKGIVLVISGIAIVIVGGFMMGAVARLWLPKDKKKQK
                     DSGDADDIKKTG"
     gene            991..1656
                     /locus_tag="VEJ68_02635"
     CDS             991..1656
                     /locus_tag="VEJ68_02635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05697.1"
                     /translation="MSSPNETFSISESVEKLKSIKYFLPARTIEEANSLLPQINGIIE
                     NYIKSLDRWKRENDTLQHASDSLWDIARVAAMKSDRPNMWDSAWDFAWKQASYSARDN
                     YGWYGGGYVSGETARDAARDAAKCAARFVAFESTKDKLGSPNPFSFLIELYALGLKPT
                     YFRKIDEKERFVVDVPLKVNGKFLIGCYAHGDKEILFSHEWKEYCTNLKQFKEEIPAR
                     VLV"
     gene            1700..1822
                     /locus_tag="VEJ68_02640"
     CDS             1700..1822
                     /locus_tag="VEJ68_02640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05698.1"
                     /translation="MCEMIDEIEIEHLRLALAKARKEMREEPVAEEEPIAAIAH"
     gene            complement(1825..2082)
                     /locus_tag="VEJ68_02645"
     CDS             complement(1825..2082)
                     /locus_tag="VEJ68_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05699.1"
                     /translation="MDAYLEEELYDLITFCIQNHQVDSPDYKSKQARIEEVGKELFAD
                     GGVDAMENMFFAIQNRIKEEIQNDAKPYRSLWNNITDEWKY"
     gene            complement(2148..2771)
                     /locus_tag="VEJ68_02650"
     CDS             complement(2148..2771)
                     /locus_tag="VEJ68_02650"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HXX05700.1"
                     /translation="MGKYELPPLPYSYDALEPYIDETTMRIHHTKHHQAYTDGLNQTL
                     ERINALSHKSYISGILSDLSLVPESARDSINFFGGGYENHRTFWESMKQNGGGKPGGR
                     LADEINVYFESFEEFKKKFTEGTIAIQGSGWGWLVYNQGFARLEFMTTNNQTSPWTQR
                     RIPLLGVDIWEHAYYLKYQNRRADYVNSWWNVVNWSEVEERFLRVAP"
     gene            2854..3546
                     /locus_tag="VEJ68_02655"
     CDS             2854..3546
                     /locus_tag="VEJ68_02655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAC2 family protein"
                     /protein_id="HXX05701.1"
                     /translation="MKFSQTKEPDIQKPMMIAAMQDMGDVGSIVIDFINTHLKTSIFR
                     EVLPSYPAYVIDNGGYIDLPEEKWEYRYAKDTILFGGGSGQPSSTEELNILCQDVINV
                     AKKYSTRFIYTLGGFHTNRPVEKSPRTFVTTTSIELTDQVRKLGIETTPEASIITGFN
                     GLILGFAKMNGIQGIGLYAELNEPKIPQYRSARSIIKTLEKLTYQKFGDTSELDVMAD
                     EVESKTREHNSQ"
     gene            3607..4329
                     /locus_tag="VEJ68_02660"
     CDS             3607..4329
                     /locus_tag="VEJ68_02660"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HXX05702.1"
                     /translation="MKDYDFAGKVALVTGGTGGLGTEVSLAFLGAKASLAITYNSDNS
                     LQKFNSMVGDMSKNVFSIKKDLRKEEDVKSLISDIVKKFGRIDILVNVIGGYIAGKPV
                     TEIDEKDWDQMMTLNLKTAFLLSKHVVTQMAKQGNGKVIHVAARPGLKGSGFDAAYVA
                     SKSGVIRLVESLSEEVKAKGINVNCILPSIIDTEENRKAMPSADYAKWVKPTDIAKII
                     LFLASEDSRPINGAAIPVYGLA"
     gene            complement(4304..5110)
                     /locus_tag="VEJ68_02665"
     CDS             complement(4304..5110)
                     /locus_tag="VEJ68_02665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PEFG-CTERM sorting domain-containing protein"
                     /protein_id="HXX05703.1"
                     /translation="MYKLAIIALVVILFIPLVSNSFAASNIEIDIHTGSANPNQHLTF
                     YPPASSAYVGDTIMIGNGDTVPHEVVSGTPSTGPDGKFDSGTLNPGQYYSYILQNSDL
                     GTINFYDKNNQWMVGSITVSQAPTGYKVVPNVGKNVGDGKTSFDLQYQSIKNIVETSI
                     GQKDHSLNLVLVGRTNQSTNLVLRLPTGLINGPFLGVQLDGQFINNFTTSQEAGINVL
                     TIPITPLTEQVSIIGSSVVPEFGPVAVLVLAISIVSIVLFTRFRPIHRLE"
     gene            complement(5223..6035)
                     /locus_tag="VEJ68_02670"
     CDS             complement(5223..6035)
                     /locus_tag="VEJ68_02670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05704.1"
                     /translation="MVKKILLLAVLLSVIAISSHLTFASAERDCSQKQICAQPGDYMK
                     YTAIVYGHNGTISYNFGNFVGPDTLKVTIMTSVSGQVINAQSTLNLKNTTLTNADGSK
                     GAFFFMVLTPINPIEIAASPFKESTATYNNYQRSVYAIEESNGSDSQEVKIDKETGLL
                     MVYKIQHVQVVSGQPVPIGTSFELTDTNIITSSDSQGTVDTTSNTNNPTIPTTVSNAP
                     SSDSNTTISSPSDYSTIIYVGIGIAAVGAGVGIMIILKRKNKDAQSLPKTSE"
     gene            6176..6769
                     /locus_tag="VEJ68_02675"
     CDS             6176..6769
                     /locus_tag="VEJ68_02675"
                     /inference="COORDINATES: protein motif:HMM:NF016214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HXX05705.1"
                     /translation="MKFKRNDLYSVIKISLFYSAVSLAFSLSSVFLPDKTIVNQISPG
                     ALNVYEIAGHFLWGVVAAVVTLRLKYILLGGAFAVLIDSDHIINLLQTEGISRMSHSI
                     AFAVIAVIIVMLVFGKRDYILGAIAGASVLSHISYDLFVDDYTGFPLFAPFNNISQHF
                     APTSWIYFEIMAIIIVGIITVLVRQKSLKEEKPSTER"
     gene            complement(6828..>6974)
                     /locus_tag="VEJ68_02680"
     CDS             complement(6828..>6974)
                     /locus_tag="VEJ68_02680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013482419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HXX05706.1"
                     /translation="LHRYHFEMIAKDGVFFLPGKLGAISYAHSESDIKNLVVASKRFS
                     ESLR"
BASE COUNT         2223 a         1215 c         1375 g         2161 t
ORIGIN      
        1 ctgaggaagt tttttctaaa gatgaattag ttgtttcaag ttcatcagca ggtgattgat
       61 tcgatagtgt atgcaaataa ttttgatcat tttcgtctag ctgatttcct ttttgtaatg
      121 tatcaagaat agttcgtaat ctatcaatgt ctccattgcc agattctatt agtgactgaa
      181 tcagtttgat ttgatcctcg gacattcggt tgggacagat acgacttaat ttaaagcaaa
      241 tggtagaaga tacaactttt aatcttagaa aattattaga ttgtcatgcc taaagttaag
      301 gttgaaaaaa taatcaaagc aaatagagaa aagatattca atcttgtgac cgactttgag
      361 aatcttccac aacgttttcc acagtttttc aaatctgtaa aagttgtatc aagagaggga
      421 aacgtcatta caacagaaga ccatgcagta atggctggaa gagaaatgca gcaaacagca
      481 aaacacatac tgactcctcc agagattgat gaggttcatc ttctttcagg tgatgcaaaa
      541 gacagtcata tagtaacaaa atatgagaat gttccagaag ggaccaaaat tactgtagaa
      601 ggtgacttta agcttgcagg taaactgaaa ctggttggat ttatggcaaa agggaaaata
      661 gaaaagggca tcgaacaagt aatgcaagaa tttgccaaag ttgccgaaag tccataaaag
      721 taaattatgt tttatggaag accgttacgc aaaacattcc ttatttaaac aaggaaatgc
      781 caactagtac atgacttcca tcaagtctgt tatcaaggga attgtgcttg tgataagcgg
      841 aattgcaatc gtgatagtag gaggattcat gatgggagct gtcgcgagac tttggttgcc
      901 aaaggataag aaaaaacaaa aagattcagg tgatgcggat gacattaaaa aaacaggtta
      961 atattaaact cataaagatc aaagtaaaag atgtctagcc caaatgagac cttttcaatt
     1021 tccgagtctg tagaaaaatt aaaatcgata aaatattttt tgcccgcacg aactattgaa
     1081 gaagcaaact cactcttacc acaaatcaac ggcatcatag aaaattacat caaatccctt
     1141 gatagatgga aaagagaaaa cgatacatta caacatgcaa gtgactcact ttgggatatc
     1201 gcaagagttg ctgcaatgaa atctgatagg ccaaacatgt gggactcggc ttgggatttt
     1261 gcatggaaac aagcaagtta ttcagcacgg gacaattatg gatggtatgg tggaggatat
     1321 gtatctggag agacagcaag agatgctgca agagatgcag ctaaatgtgc agcaagattt
     1381 gttgcttttg aatccacaaa ggacaagctt ggtagcccaa atccctttag ctttttaata
     1441 gaactgtacg ccttgggtct aaaaccaaca tattttagaa aaatagacga gaaggagaga
     1501 tttgtggtag atgttccttt gaaagtaaat ggcaagttct tgattggatg ctatgctcat
     1561 ggcgacaagg aaattctttt ttcgcacgag tggaaagaat attgcactaa cctaaaacaa
     1621 ttcaaggaag aaattccagc ccgagttctt gtatagttct gcacagacct taagtacgag
     1681 atcgtgatat tgattactca tgtgcgaaat gatagatgaa attgagattg aacatctcag
     1741 actggcactt gccaaggcaa gaaaagaaat gcgagaggaa ccagtagcag aagaagagcc
     1801 aatagcagct attgctcact agatctagta tttccattcg tcagtaatat tattccacag
     1861 cgaacgatag ggcttggcat cattttgaat ttcttctttt attctgtttt gtattgcaaa
     1921 aaacatgttc tccattgcgt caactccgcc atctgcaaat agctcttttc cgacttcctc
     1981 tattcttgct tgttttgatt tgtaatctgg cgagtctact tgatgatttt gaatacaaaa
     2041 tgtaatcaaa tcgtacaatt cttcttcaag atatgcatcc attctagtac cttatcttga
     2101 actttattga aagtttcttc tgtaaagggt ttatgggctt gatcatctta tggtgcaact
     2161 ctgagaaatc tctcttcgac ctcggaccag ttaacaacat tccaccaaga attcacataa
     2221 tctgctcttc tattttgata ttttagatag tatgcatgtt cccaaatatc cacgcccaaa
     2281 agaggtatgc gtctttgggt ccatgggctt gtttgattgt tggttgtcat aaattctagt
     2341 cttgcaaaac cttgattata cacaagccag ccccaaccac ttccttgtat tgctatggtt
     2401 ccttccgtaa attttttctt aaactcttca aaactttcaa agtagacatt tatctcatca
     2461 gctagccttc ctcctggctt tcctcccccg ttctgcttca tactctccca aaaagttctg
     2521 tgattttcat atcctcctcc aaagaaatta atcgaatctc ttgctgattc tggaaccaga
     2581 ctaagatcag acaaaattcc agagatgtaa cttttatgcg ataatgcatt aattcgttct
     2641 aatgtttgat ttaatccgtc tgtgtatgct tgatggtgtt tagtatgatg aattctcatc
     2701 gtagtttcat cgatgtaagg ttctaacgca tcataagaat atggaagcgg aggaagttca
     2761 tattttccca tatgtatgaa tttttaaaaa aactctcttt atatcctaat gcaagatctc
     2821 aaggtattaa tcataaacag tagtaaaaac cacatgaagt tttcacaaac aaaggaacct
     2881 gacattcaaa agcctatgat gattgcagcc atgcaagaca tgggtgatgt gggcagcatc
     2941 gttattgatt ttatcaatac tcatcttaag acttcaattt ttcgggaagt tcttccctct
     3001 tatccagcat atgttattga caacggtggc tacattgatc ttccagaaga aaaatgggaa
     3061 tatcgatacg caaaagatac gattttgttt gggggtggtt ccggacagcc atcatcgact
     3121 gaagagctca acattttatg ccaggacgta atcaatgtcg caaaaaaata ttcaactaga
     3181 ttcatctata cgctgggagg atttcacact aataggcctg tagaaaaaag tccaagaact
     3241 tttgtaacta caacatctat tgagcttact gatcaggtac gcaagcttgg aattgagaca
     3301 actccagagg cctccataat cactggattt aatggtctca tcttgggttt tgccaagatg
     3361 aatggtattc agggaattgg actgtatgca gagcttaacg aaccaaagat tccacagtat
     3421 cgttcggcaa gaagcataat caagacactt gaaaaactaa cttaccaaaa atttggagac
     3481 acatcagaac ttgatgtgat ggctgacgaa gtagaatcaa agactagaga gcacaattca
     3541 caatagttca agatctttga tattcaaatt gacactcttt tttagttggc actgtaattg
     3601 tttatcatga aagattatga ttttgcaggt aaagtagcac tagtcactgg tggaactggt
     3661 ggactaggga ccgaagtcag tcttgctttt cttggagcca aggcatcact tgctattacc
     3721 tacaattccg acaattcgtt acaaaagttc aactcaatgg tgggtgacat gtcaaaaaat
     3781 gttttttcca ttaaaaaaga cttgagaaaa gaagaagatg ttaaaagttt gatctcagat
     3841 attgtcaaaa agtttggaag gatagatatt ttggtaaatg ttattggtgg ttacattgct
     3901 ggcaagcctg taactgaaat cgatgaaaaa gattgggacc agatgatgac tctaaatctc
     3961 aaaactgcat tcctactatc caaacatgtt gtaacacaaa tggccaaaca aggaaacggc
     4021 aaagtaatac atgttgcagc aagacccgga ctcaaaggat ctggatttga tgctgcttat
     4081 gtagcatcaa aaagtggagt aataagacta gttgaatctc tttcagaaga agtaaaggcc
     4141 aagggaatca atgtaaactg tattcttcca agtatcattg ataccgaaga gaacagaaag
     4201 gcaatgccca gtgctgatta tgccaaatgg gtaaaaccta cagatattgc aaaaattatc
     4261 ttgtttttag cttccgaaga ttctagacca attaacggcg cagctattcc agtctatgga
     4321 ttggcctaaa tcttgtaaat agaacgatag atacaattga gattgcaaga actagtactg
     4381 cgactggacc aaattctggc acgacagagg aacctattat gcttacttgc tctgtaagtg
     4441 gagttattgg aatggtaagt acatttatgc ctgcttcctg agatgttgta aagttgttta
     4501 tgaattggcc atcaagttgc actccaagaa atggcccatt gatcaaacca gttggtaatc
     4561 ttagaactag attggtactc tgatttgtac gtcccaccag tacaagattc aatgaatgat
     4621 ccttttgtcc aattgatgtt tcaacgatat tttttatgga ttggtattgt aaatcaaaac
     4681 ttgttttacc atcgccaaca ttcttgccta cattgggtac tactttgtat ccggttgggg
     4741 cttgtgacac agtaatactt cctaccatcc attgattgtt tttatcatag aagttaatcg
     4801 taccgagatc actattttgt aaaatgtaag agtaatactg accagggttt agagttccac
     4861 tatcaaactt gccatcagga ccagtacttg gagttcctga cacaacttca tgtggtaccg
     4921 tgtcaccatt tccaatcatt attgtatcac ctacataagc agatgaggct ggaggataga
     4981 atgtcaaatg ttggttggga ttagcagagc ccgtatgtat atcaatctca atgtttgatg
     5041 ctgcaaatga atttgataca agaggaataa acagtatcac tactaaagca ataatcgcta
     5101 atttgtacac taggagcgaa tcaaggtttt tgcctaataa gcttggttgt gtgaaaggat
     5161 ttactgaaga acttgatttt tctcggcttg tttagatttc aaaattaatt ttgataaaga
     5221 tcttattctg aagttttggg caaagattgc gcatctttat tctttctttt caggataatc
     5281 attattccta caccggctcc taccgcagca atccctattc caacatagat aatagtggaa
     5341 taatcactgg gactagaaat tgttgtattg gaatcagagc ttggtgcatt tgaaacagta
     5401 gttgggatgg ttggattatt tgtattcgat gtagtatcaa ctgttccttg cgagtctgat
     5461 gaggtgatta tgttggtatc agttaattca aaagacgttc cgataggtac tggctgtcca
     5521 gataccactt gaacatgctg tatcttgtaa accatcagta aaccagtttc tttgtcaatc
     5581 tttacttctt gtgaatctga tccgtttgat tcttcaattg cataaactga tctttgatag
     5641 ttgttgtatg ttgcagttga ttccttgaat ggtgaggctg caatttcgat tggattgatt
     5701 ggggtaagaa ccatgaaaaa gaatgcaccc ttggatccgt cagcgtttgt tagcgtagta
     5761 tttttcaaat tcagtgttga ttgtgcattt attacttgtc cacttacaga tgtcatgatg
     5821 gtaactttta gagtatcagg gcctacaaag ttgccaaaat tatatgagat ggtaccatta
     5881 tgaccgtaga caatggctgt atacttcatg taatcaccag gctgtgcaca aatttgtttt
     5941 tgactacaat ctcgttcagc tgaagcaaat gttagatgag atgaaatagc tatgactgac
     6001 aaaagaaccg caagtaaaag aattttttta accatagtga accttctttt ggttctataa
     6061 gaatcattga aatggtaaaa taatttcaaa aaacaatttc atgtatccgt gggagaagaa
     6121 aatccatgtt attagttgaa acgaataatt acatgaaaaa attctcaacg attggatgaa
     6181 atttaaaaga aacgatcttt attctgtcat aaaaatttcg ttgttttatt ctgcagtctc
     6241 tttagcgttt tcattatcaa gtgtctttct tccagataaa accattgtaa atcagatatc
     6301 gcctggagcc ctcaacgtgt atgagattgc aggtcacttt ttgtggggtg tagtagcagc
     6361 agtagtaact ctgagattaa agtacatcct tcttgggggc gcgtttgcag ttttgataga
     6421 ttcagatcat atcataaact tgttacagac tgagggtatc tcaagaatga gtcactctat
     6481 tgcctttgcg gtaattgcgg tgattattgt aatgttagtc tttggaaaaa gggattacat
     6541 tctgggagca atcgctgggg caagtgtatt gtcacatatc tcgtatgatc tttttgtcga
     6601 cgattatact ggctttccat tatttgctcc atttaacaac atctcacagc actttgctcc
     6661 cacaagctgg atatactttg agattatggc aatcataata gttggaataa taacggtatt
     6721 ggtaagacaa aaatcattga aggaagaaaa acctagcact gaaagatgaa aattgtagat
     6781 aattgaggct ttgaaactag ctagaattta tgactttgaa tcaactttta tctcaacgat
     6841 tcagaaaatc tttttgaagc cactaccaag ttcttaatat ctgattcaga atgggcatac
     6901 gatattgcac ctagctttcc aggaagaaag aagacgccat cctttgctat catctcaaag
     6961 tgatatctgt gcaa
//
LOCUS       DASPUS010000120         2754 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1563989, whole genome shotgun sequence.
ACCESSION   DASPUS010000120 DASPUS010000000
VERSION     DASPUS010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2754)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2754
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1563989"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /locus_tag="VEJ68_02685"
     CDS             <1..430
                     /locus_tag="VEJ68_02685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05707.1"
                     /translation="VSTSQLSQMLPVQISILPGSYSPQAMASQSNQQYYNQYYSPNTI
                     QITPGTVVVWTNNDNIAHQIWSGTNTQSNVNPYTPDGKIESAPIPPGASFEVIINDTG
                     MTTFYDPGYTWMNGLIVSIPTVSGQQNIGAYYKNANPFLH"
     gene            complement(440..1141)
                     /gene="cbiE"
                     /locus_tag="VEJ68_02690"
     CDS             complement(440..1141)
                     /gene="cbiE"
                     /locus_tag="VEJ68_02690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008297164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046025 - precorrin-6Y
                     C5,15-methyltransferase (decarboxylating) activity
                     [Evidence IEA];
                     GO_process: GO:0046140 - corrin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-6y C5,15-methyltransferase
                     (decarboxylating) subunit CbiE"
                     /protein_id="HXX05708.1"
                     /translation="MGKVFAIGVGPGSPKYVTDIVKEIIVNSDIIMGYKYTLKTIEEF
                     LKNKEVCEITMQDQEGIYQKVAKSLGSKTCVVPFTGDVNFSESEVVDRLIEIFGDVQI
                     IPGISSIQVAAAKARVPLDKSKVITMHISTSIEEKKLDLQKALIDGHSVILVPRPWPR
                     EPSKHFMQSEIAIYLKNHGFDTSKIKVHVFEFLTTEKETSFVGMVKDLEGKQFSDLSV
                     MVFDQTKLESYINLK"
     gene            1224..1889
                     /locus_tag="VEJ68_02695"
     CDS             1224..1889
                     /locus_tag="VEJ68_02695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05709.1"
                     /translation="MNLSIASTISVLILVSLIPNSFASSQNSTLDEQGNYLNPSLGIG
                     FQAPEGWIVQEPKKTQLGAPDIAIVGPFSGEFTPSISFIIEKANGTLLNNYFEDKKNM
                     IIKNAQSHNVSFLSEQDSTINGYNAKIVIIKEDFIAQGQSTEIKFKQALVLANDNFYT
                     ITYANEEKNFDTSLSNYDSLLNSIVFTNSQNSVGTDLWLPISGIIAVIAIGSILVIRK
                     KRS"
     gene            1973..2293
                     /locus_tag="VEJ68_02700"
     CDS             1973..2293
                     /locus_tag="VEJ68_02700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008301329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05710.1"
                     /translation="MKKEYIVVRIEGSPEGSPYVVVSLSSTKDVREQQSTPMSPFGAG
                     GVMGFTNIDDMMKNLNKMMAGGLGQSGAITSIKLDMHEYKELNLAVGDKVYLEMTKAE
                     SLGV"
     gene            complement(2303..>2754)
                     /locus_tag="VEJ68_02705"
     CDS             complement(2303..>2754)
                     /locus_tag="VEJ68_02705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HXX05711.1"
                     /translation="DVQNEPVLKNARLSLTDGIVDIKFSSDDFGMDDAVALMDRFTRI
                     DPDYDFFRFTDSFRFLTEDISDVRKVLESLPAHKNFLQTGLAKITIHINEPEDSSVVS
                     HVSEVLHSNGIELVNAFFGQDNIVIVLHEKDAARAYEILRGEISRQN"
BASE COUNT          894 a          559 c          465 g          836 t
ORIGIN      
        1 agtttcaacc tcacaacttt cccaaatgct tcctgtacaa ataagcatct tacctggctc
       61 ttattcacca caggccatgg catcccaatc aaatcaacaa tattacaacc aatactactc
      121 accaaatacc attcaaatca ctcccggaac tgtagtagtt tggacaaaca acgacaacat
      181 tgcccaccaa atatggagcg gtacaaatac acaaagtaac gttaatccgt atacacctga
      241 tggaaaaatc gaaagcgcac caatacctcc aggtgcatca tttgaggtta ttatcaatga
      301 cacaggaatg acgacattct atgatcctgg ttacacatgg atgaacggac ttattgtttc
      361 aattccaacc gtatcaggtc agcaaaatat tggtgcctac tacaaaaacg caaatccatt
      421 tcttcactaa atattaaaat tattttaggt taatgtacga ttccagcttt gtctggtcaa
      481 agaccatcac tgaaagatct gagaattgtt ttccttccaa atccttcacc atgccaacaa
      541 aactagtctc tttctcagtt gtcagaaatt caaaaacatg aactttgatt tttgatgtgt
      601 caaaaccatg atttttcaag tagattgcaa tttctgactg cataaaatgc ttggaaggct
      661 ctcttggcca tggacgggga accaatatta cgctatgacc atctatgagt gccttttgga
      721 gatcaagctt cttctcttct atactagtcg agatatgcat cgttatcact ttactcttat
      781 ccaaaggaac tcttgccttt gctgcagcaa cctggatcga acttatacct ggaattattt
      841 gtacatctcc aaaaatctcg atcaacctgt ctaccacttc agattctgaa aagtttacat
      901 caccagtaaa cggtactaca caggttttac ttcctaatga ttttgcgact ttctgataaa
      961 ttccttcttg gtcttgcata gtaatctcac aaacttcttt attttttaaa aactcctcaa
     1021 ttgtcttgag tgtatacttg tagcccatta tgatatctga attcactatg atttccttta
     1081 caatatctgt aacatacttt ggtgagccag gtcccacacc aatcgcaaaa actttgccca
     1141 tgaggtatct tttgtaatct ccaatataat tcacaaattc tctttacaat tagcttttat
     1201 ttgcgaattt gaaacttcgg tcagtgaatc ttagtatagc atcaacaatt tctgtcttga
     1261 tcttggttag tttgattcca aattcatttg caagttcaca aaattctacg ttagatgaac
     1321 aagggaatta ccttaatcct tctcttggta ttggatttca agccccagaa ggttggatag
     1381 ttcaggaacc aaaaaaaaca caactaggag caccagatat tgcgatagtc ggtccttttt
     1441 caggcgagtt tactccttcc atatcattta tcattgaaaa agcaaatggt accttgctta
     1501 acaattactt tgaagataaa aaaaatatga taataaaaaa tgctcaatcc cacaatgttt
     1561 cgtttttgtc tgaacaagat agtaccatta atggctacaa tgcaaaaatc gtaatcatca
     1621 aggaagattt tatagcacag gggcaaagca ctgaaataaa atttaaacaa gcccttgttt
     1681 tagcaaatga taatttttat acaattacct atgccaatga agagaaaaac tttgacacat
     1741 ctctatcaaa ctacgatagc ctcttaaact ccatagtttt tacaaactca caaaattctg
     1801 ttggaaccga tctttggctt ccaataagtg ggataatagc tgtgattgct ataggatcaa
     1861 tattggttat aagaaagaaa agatcctaat tataatccaa gttatgtgta caaaaggtgt
     1921 attctaggaa caatggcgaa aggtaaaata tactgtttat ggaaactatg gtatgaagaa
     1981 ggagtatatt gtagtcagga ttgagggttc tcctgaggga tcgccctatg tggtagtctc
     2041 cctatccagt accaaggatg ttagagaaca acaaagtact ccaatgtcgc cttttggggc
     2101 tggtggcgtt atgggattca cgaatataga tgacatgatg aagaacctaa acaaaatgat
     2161 ggcaggaggc cttggccaat ctggggcaat tacttcaatt aagctagata tgcatgaata
     2221 caaagagcta aaccttgctg tcggagataa ggtatatcta gaaatgacaa aagcggagtc
     2281 tttaggcgtc tagcaagata cactagttct gacgagaaat ttctccacgc aggatctcat
     2341 atgctcttgc agcatccttt tcatgcaaga ctattacaat attatcttgt ccgaaaaacg
     2401 catttacaag ctcgataccg ttactatgaa gaacctcgga tacatgggag actacagagc
     2461 tatcttctgg ttcattaatg tgaatggtta tcttagcaag tcctgtttgt aggaaattct
     2521 tgtgtgctgg aagagattcc aaaacttttc taacatcact aatgtcttcc gttaggaatc
     2581 gaaaggaatc ggtaaaccta aaaaaatcat aatcaggatc aattcgggtg aatctatcca
     2641 tcaaagctac ggcatcatcc atcccaaaat catctgaaga gaatttgatg tctacaatac
     2701 cgtcagtaag agacaacctt gcattcttta gcactggttc attctgtaca tctt
//
LOCUS       DASPUS010000121         7710 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_895228, whole genome shotgun sequence.
ACCESSION   DASPUS010000121 DASPUS010000000
VERSION     DASPUS010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 7710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7710)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7710
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_895228"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            17..1750
                     /locus_tag="VEJ68_02710"
     CDS             17..1750
                     /locus_tag="VEJ68_02710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIPR family protein"
                     /protein_id="HXX05712.1"
                     /translation="MLEYIPGAKPVSYNYNSVQPLEGFVQNIKDNIREYAESSQSEVE
                     KGHNFLQWVLTRVFEATEDDATDAIIDGANDLGIDAYLPVDFSEDKIYLFQSKYGTSH
                     SIEAIIKFREDVKNLPIKEITKMRPEIANLVTKIKEKNLKIECVYVTDQKVENENFEA
                     VEIYDIDAIVQKLWDRIKKPAAGKKAPIRLECKLRYKETLLGILKLRELTNFVTKNRD
                     YVFESNIRQWMQFKTTVNKGLRETLQESPSKFFYYNNGITIVVNDFEELEDNSIMLHS
                     PQIVNGAQTSNSVLDHAKRTHNLDGSITVTIIKAADELDQNNITKYRNSQNAVRGKDL
                     VSLMDFHKSIKSQMENLHYFYEIQAGSFDTRAKSQQSEFVGDLIYNKYLPENHKKVIV
                     AKDAIQVLVAGIEQRPTEAYSSPAQFLPRGSKYDEVFNEKLKDDYRLLLYPYLVKEYA
                     KKTLSYGKKGGHKTKRYATLFFVAVYFKILHGQILLTQGDFKEDISKLEPIFKSVKLN
                     QRILKLTDTIVTKFLEDTVVDDEMDAANTYHNFFSHHVWQDSMIRVIEKKIKQEDEEI
                     TSIKKIVQDLF"
     gene            complement(1980..4460)
                     /locus_tag="VEJ68_02715"
     CDS             complement(1980..4460)
                     /locus_tag="VEJ68_02715"
                     /inference="COORDINATES: protein motif:HMM:TIGR02276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05713.1"
                     /translation="MASDHALTRGSFLVKAGNFIKSTSLSVPVTQNVTLPFKPKALLV
                     FTSGMNSSGFADIYKLSVGFSNGTSTRALGLASGDVLSKSSSGRAFGKNIVELVSNSG
                     VGTAAEANVTRFTINNFTMKWTTNDNKPVLINYIALGGNDLVKSSVSSFSSTTSATTQ
                     NVTLGFRPDFLMFMHAAKTSETSTSINGYLSYGFATPLSKNAIAVASVNNTSPTNTCE
                     TQRTDSALVALNPSNCGFTIRISNVLFNSNGFQIQWSSTPTSADKIYFMALKGGAYVV
                     GNFTQPTSAVPVKQTIKETTQPNGLILSSFNHVANNAAQSNNRLSFGVSDNSTSEAVW
                     SGDKKGVTTTVTARSENTTQIITLATEQATGSNSITNATASILTMNTTGFTLNWAKDD
                     STAKQILYTVFGRNPIDNNIIVTEKTVPTNQTNFNFTSTTLTPSSFTLANYANSTDTK
                     IFSNLSPGTYNVTETSNAHYISTSSCNDGSSINAINLKAGQTITCTIANTLIPTSVTT
                     VSVGSLPDSMVFNPSNSDMYIGNQFSNTASVMSGTSVVATVPTGIDPFGFAYDSANNY
                     IYVPNNDGDSVSIISDTTNIANLTSYCAPQDAVFNPSNNYIYVVNYCANTVSVISNTT
                     KIANVSVGSNPVALAYNPSNNDIYVTNYFSNTVSIISGTTNIANVTVGFEPAALAFNP
                     SNNYMYVSNSGSNTVSVISNTTKITDITVGPSFAAPGVPVFNPTNNYMYIPNGRLNTV
                     SVLSNTTKIASITTGNSPQGGVFDSSDNFIYIPNYSSNTVSVISGITNIANVTVGASP
                     NLAAFNPVNNNVYVTNGGSNSVSIISGY"
     gene            complement(4769..4987)
                     /locus_tag="VEJ68_02720"
     CDS             complement(4769..4987)
                     /locus_tag="VEJ68_02720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05714.1"
                     /translation="MRKIPIFILVLSLVVLLFNTIQGTSTPVSQVNTLSFNSTNQKFD
                     PGFLQKINNMTESGETGEYTTIIILEKT"
     gene            complement(5138..5962)
                     /locus_tag="VEJ68_02725"
     CDS             complement(5138..5962)
                     /locus_tag="VEJ68_02725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05715.1"
                     /translation="MLAYYYLVIGAIGILIFLNIPFLSYADDDWKIQNVTREDGHTFK
                     IPYKIINGTIEKITYQSGGIMVYLNSTNNIRGLLEISIPRDLFNPQDVQGRDMPFITL
                     VNGQFGNFKEVVDLKCLRTLDINLNQDTKEIALATTITSGPIPRSVVPPIYITISGNS
                     SGSQQNIMVSGCTDLGLNDKELTVTIINNQGQIYKTVSIIPDANGLFSSSVLVQGNPS
                     IQGNYTVNATYAGYTTATTLSVPEFPSFWLIILVASISLLLILQLVLKQTLIMQKF"
     gene            complement(6063..6353)
                     /locus_tag="VEJ68_02730"
     CDS             complement(6063..6353)
                     /locus_tag="VEJ68_02730"
                     /inference="COORDINATES: protein motif:HMM:NF026297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HXX05716.1"
                     /translation="MKNEFKPDVDVLMRLAEAFFENNSMKKTHVYFASRISWISFERY
                     LNWLITKNYVEPVLDGTEGEYRLTNEGREMFFILKKFKDYIKSHKSSSVLYH"
     gene            complement(6671..7645)
                     /locus_tag="VEJ68_02735"
     CDS             complement(6671..7645)
                     /locus_tag="VEJ68_02735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05717.1"
                     /translation="MKNDSLIKYFCSASKQSNQILAAVAAFVTEHKILSNWMTVGQDG
                     WILPCTLDKYDWCGIWTTIGCLKNKLHEKLGKGRRNYIKQYQRSCYRPSCIHCYLKWI
                     ARQANRATRRIEEYAERTGQKPIHLMLMANKNQYDLPYKLLRKRMMEILKMAQWEGGA
                     VIFHPFKFNENTRQFYYSPHFHLVGFGRKNKITRTFGMFGWYVKIGEERISVFQTFCY
                     LLSHCGIRKRHHVVTWIGELSYSKVPSEKESKITCCPVCGGEFVPVYYEGEHPIVRPE
                     RHFEGLVDSDEHWKTVETGEWFDSEYCRFEYAPTRKLNEILQSLAEAN"
BASE COUNT         2424 a         1316 c         1475 g         2495 t
ORIGIN      
        1 agaaaaaact aatggcttgc tagaatacat tccaggtgca aaacctgttt catataatta
       61 taattccgtc caaccactgg aaggatttgt acaaaatatc aaagataaca taagagaata
      121 tgctgaaagt tctcagagcg aagttgaaaa aggtcacaat tttttacaat gggtactaac
      181 tagagttttt gaggcaacag aagatgatgc aacagatgcg ataatcgatg gtgcaaatga
      241 tcttggaatt gacgcatacc taccagtgga tttttcagaa gataaaatct accttttcca
      301 gtcaaaatat ggaacttcgc attcaattga agccataata aaattcagag aagatgtcaa
      361 gaatctgcca atcaaggaaa taacaaagat gcggccagag attgccaact tggttaccaa
      421 aataaaggaa aaaaatctca agatagaatg tgtctatgta acagaccaaa aagtagaaaa
      481 tgagaatttt gaggctgttg agatttatga tattgatgcc atagtgcaaa agttatggga
      541 tagaataaag aaacctgctg ctggaaaaaa ggcacctatt aggctagaat gcaaactgag
      601 atacaaggag acccttcttg gaattctaaa actacgagaa cttactaatt ttgttacaaa
      661 gaatagagac tatgtttttg aatcaaatat caggcagtgg atgcagttca aaactactgt
      721 aaacaaggga ctccgtgaga ctctacagga atcacctagc aaattcttct attataacaa
      781 tggaataaca atagtagtaa atgactttga agaacttgaa gacaattcta tcatgttaca
      841 ttctcctcag atagtaaatg gagcacaaac atcgaactca gtcttggatc atgcaaagcg
      901 tacacacaac cttgacggaa gtattactgt tacaatcatc aaggctgcag atgagctcga
      961 tcagaacaac ataacaaaat atagaaattc tcagaatgca gtaagaggaa aagatcttgt
     1021 atcacttatg gactttcaca aatcaatcaa gtcacaaatg gaaaatctac actattttta
     1081 tgaaatccaa gctggttcat ttgatacaag agcaaaatca caacaaagtg agtttgttgg
     1141 agatttgatt tacaacaaat atcttcccga gaatcacaaa aaggtaatcg tggcaaaaga
     1201 tgccatccaa gtacttgttg cagggataga acagaggccc acagaagcat atagttctcc
     1261 tgcgcagttt cttccaagag gaagtaagta tgatgaagtt ttcaatgaaa aactaaaaga
     1321 tgattatcgt ctattgcttt atccatatct tgtaaaagaa tatgcaaaga aaacactaag
     1381 ctatggaaag aaaggaggcc acaagacaaa aagatatgct acattgtttt ttgtcgcagt
     1441 ttactttaag attttacacg gacagatttt gctcacacaa ggtgatttta aagaggacat
     1501 atcaaagctt gaacctattt ttaagagcgt taaacttaat cagcgaatct tgaagttaac
     1561 agatacaata gttacaaaat tcctcgagga tacagtggta gacgatgaga tggatgctgc
     1621 aaatacatat cacaatttct tctcacatca tgtatggcaa gattccatga tacgagtcat
     1681 tgagaagaag ataaagcaag aagatgaaga aatcacaagt attaagaaaa tagttcaaga
     1741 tcttttttaa gaaatttttc aacaaatagc ggtagaaagg tgatcgatag gtctcttgca
     1801 ggaggtccgc atcaagccaa ccattctacc gctacttatt gtaaataaca gcagtattta
     1861 acatgattaa taacatcaca attcgatata taaaaaatta atagaaaatg agttttcatt
     1921 tttttaatct gttgattgca agcaacaatc cttgaagtaa agccgcagat cttgtaggac
     1981 tagtatcctg aaattatgga aactgagttt gaaccgccgt tggttacata aacattattg
     2041 ttaacggggt tgaatgctgc tagattggga gacgctccaa ccgtaacatt tgcaatgttg
     2101 gttattcctg aaatcactga aaccgtattt gaactataat ttggtatgta aataaagttg
     2161 tcagaggaat caaatacgcc tccttgagga gaattaccag ttgttatgct tgcaatcttg
     2221 gttgtatttg atagaacaga gacggtgttg aggcgaccat ttggaatata catgtagttg
     2281 ttagtgggat tgaatactgg tactccggga gcagcaaacg aaggacctac tgtaatatca
     2341 gtaattttgg ttgtatttga tatgacagag acggtgtttg aaccagaatt tgatacgtac
     2401 atgtagttgt tggaaggatt aaatgctagt gcggcaggct cgaagcccac tgttacatta
     2461 gcaatattgg ttgttccgga tataatggag acggtgtttg aaaaatagtt tgtaacataa
     2521 atatcattgt tggaaggatt gtatgccaat gccacaggat tactgccaac tgatacatta
     2581 gcaatcttag ttgtatttga tatgactgaa acagtattgg cacaatagtt tactacatat
     2641 atgtaattgt tagagggatt aaatactgca tcttgaggag cacaatagct tgtcagattg
     2701 gcaatattgg ttgtgtctga tatgatggaa actgaatctc catcattgtt tggtacatat
     2761 atgtaattgt tagcagaatc ataggcaaat ccaaaaggat caatgcctgt tggcacggta
     2821 gcaactacac ttgtgcctga cataactgac gctgtatttg agaattgatt tcctatatac
     2881 atgtcgctgt tagaaggatt aaacaccatt gaatctggaa gactgccaac tgaaactgta
     2941 gtgactgatg tcggtattag agtattagct attgtgcatg taattgtctg accagctttt
     3001 aggtttattg cgtttatgga acttccgtcg ttacaacttg atgtgctaat ataatgtgcg
     3061 ttcgaggttt ctgttacatt gtaagttcca ggagacagat tactgaaaat ctttgtatcg
     3121 gttgagtttg catagttggc aagtgtaaaa gatgatggcg taagagttgt gctggtgaaa
     3181 ttaaagtttg tctggttggt tggaacggtt ttctccgtta caattatgtt attatcaata
     3241 ggattgcgtc caaatactgt atagagtatt tgttttgctg ttgaatcatc ctttgcccag
     3301 ttcagagtaa agcctgtagt attcatggtg aggatgcttg ctgtggcatt cgtaatggag
     3361 tttgatcctg ttgcctgttc tgttgccaat gtgattattt gggttgtgtt ctcagatctt
     3421 gcagtaacag tagtggttac tccctttttg tctccagacc agactgcttc cgaggtactg
     3481 ttgtctgaga ctccaaacga caacctgttg tttgactgag ctgcattgtt tgcaacatga
     3541 ttgaaacttg acagtatcag accatttggt tgcgtcgtct cttttattgt ctgttttact
     3601 ggaactgcag acgttggttg agtgaaattg ccaacaacgt atgcacctcc ctttagtgcc
     3661 atgaaataga tcttgtctgc agatgttggg gtgcttgacc actggatctg aaatccgttg
     3721 gagttgaaaa gcacgttaga tattcgtatg gtaaatccac aattgcttgg gttgagtgct
     3781 acaagtgcac tgtctgttct ttgcgtttca catgtattgg ttggagaggt gttgtttaca
     3841 cttgccactg ctattgcatt tttgcttaat ggagttgcaa atccgtagct tagatagcca
     3901 ttaatggatg tagatgtttc acttgttttt gcggcatgca tgaacatcaa aaagtcaggt
     3961 ctgaatccga gtgtcacgtt ctgggttgtt gcagatgttg ttgagctaaa acttgagact
     4021 gaggacttga ccagatcgtt tccaccaagt gcgatataat tgatcaagac tggtttgttg
     4081 tcatttgtgg tccatttcat tgtaaaattg ttaatggtaa accgtgttac gttggcttct
     4141 gctgcggttc caactccact atttgaaacc agttccacaa tgtttttgcc aaacgccctt
     4201 ccagagctgg attttgagag gacatcacct gatgctagtc cgagggctct tgtgctagtt
     4261 ccatttgaaa atccaactga tagtttgtaa atgtcagcaa atcccgagga gttcattcca
     4321 gatgtgaata ccaacaatgc ttttggcttg aagggtagcg taacattttg cgtaactggc
     4381 acgctcaagg atgtagattt tatgaaatta cctgctttga caagaaaaga tcctcttgta
     4441 agggcatgat cggaagccaa cgcataggtt tctgtagatc ctagctgaga cgatacatac
     4501 gtagcgttaa ctgtaatggt ataggtatct gttatcggag cataaaatac tgcaaactca
     4561 ttggtttgat tctttgagtc gcttcctgct acaagagtac cgtctgaacg tgtgatatta
     4621 aaattcagat cgcttacctt gagatctgtt ggatttgtta cattgcctgt gggatgtttt
     4681 aaccatgata gaattacttt aactacatca tttttgttag ctgaaaatgt atatgttttt
     4741 gctgctcctt gaatgattgc atcttggatt atgttttttc cagtattatg atggttgtat
     4801 attcaccagt ttcaccagat tctgtcatgt tatttatttt ctgtaggaaa cccggatcaa
     4861 acttctgatt ggtgctatta aaggacaaag tatttacttg agaaacagga gttgatgttc
     4921 cttgaattgt gttgaataat aaaacaacta aagacaaaac taagataaat attggtattt
     4981 ttctcatgat ctaaacaagt ctcctgattt ttgtcacaac tcaatgacgt gtaattaata
     5041 aataagacag actcatcctc catagctatc tataatagct attgatgata tgtatttaga
     5101 ttaaattgaa tagttccagg atagaatttg acagatttta gaatttttgc ataatcaaag
     5161 tttgtttgag tactaattgc aatattagta gaagtgatat actcgctaca agaataatta
     5221 gccagaaact tgggaattct gggactgata atgtcgtagc ggttgtatat cctgcatagg
     5281 ttgcatttac tgtgtaattt ccctgtatac ttggattgcc ctgaaccaga actgatgatg
     5341 agaacaaacc atttgcatct ggaattatgg atactgtttt gtatatttgt ccctggttgt
     5401 ttatgattgt gacagtcaac tccttatcat ttagtcccag atcagtacag ccagaaacca
     5461 tgatattttg ttgagaacca gaactatttc cgctgatagt aatgtaaata ggcggaacta
     5521 ctgatctagg aataggacct gaagtaatag tagttgcaag ggctatttct tttgtgtctt
     5581 gattcaaatt gatatccaat gttctaagac attttagatc tacgacttct ttgaagttgc
     5641 caaattgacc attaaccaat gtaataaaag gcatatctct tccttgaaca tcttgtggat
     5701 taaacaagtc tcgtggtatc gaaatttcaa gtaatccacg gatattattt gttgaattta
     5761 agtaaaccat aatacctcct gattgatatg ttatcttttc aattgtacca ttgataattt
     5821 tgtaaggtat tttgaatgta tgtccatctt ctcgtgtaac attttgaatt ttccaatcat
     5881 catcagcata tgataaaaat ggaatattaa ggaaaatcaa aattcctatt gcaccaatta
     5941 cgagatagta gtaagcaagc aactagtagt aatagaagat tatttcatat aaagagagtt
     6001 gcgtaatatc ttttaacaac actatgttac ataaaatcaa attatcaact aaaaaggaaa
     6061 atttaatgat agagaacaga agatgactta tgagacttga tataatcttt aaattttttt
     6121 agaatgaaaa acatctctct gccttcattt gttaatcgat attctccttc agttccatct
     6181 agtactggct cgacataatt tttggttatt agccaattca gatatctttc aaaggaaatc
     6241 cagctaattc ttgaagcaaa gtacacatgt gtctttttca tagaattatt ttcaaaaaat
     6301 gcttctgcca aacgcataag aacatctaca tctggtttaa actcgttttt catgggtcaa
     6361 ctccaataaa caaccttgca aaataatgta gcatatcatt tgtgtaccca tctgtaaccg
     6421 atttatctat aaaacattgc gtatgttttg aatgtaaacc aaaagatcga tcttaatcta
     6481 ttcttggtat aatttatttt aaaaatagat cgattatttc tcaaaaattc cgaatttatt
     6541 atcacacatg ttagatttac aattttcctc aaaacactct ctttataata aaaaaattga
     6601 aatgggattt gaagcctccc tttggcttgc ccgatcgttt agtccataca tttcaattta
     6661 ttaaatcatt ttaattagct tcagccaatg attgcaaaat ttcgtttaat tttcttgttg
     6721 gagcatactc aaaacgacaa tactcgctat caaaccattc tccagtttcc actgtcttcc
     6781 aatgctcatc tgaatctacc aaaccctcaa aatgccgctc tggacgcact attgggtgct
     6841 caccttcata gtatacaggc acaaattcgc caccacagac agggcaacat gtgatttttg
     6901 actctttttc agatggtact ttgctatatg ataactcacc aatccatgtg acaacatgat
     6961 gtcttttcct tataccacag tgtgatagaa gatagcaaaa cgtctgaaag actgagattc
     7021 tctcctcgcc tatcttgaca taccaaccaa acataccaaa agtcctagta atcttgtttt
     7081 ttcttccaaa tcctaccaaa tggaaatgtg gtgaataata aaattgtctt gtgttttcat
     7141 tgaacttgaa aggatgaaaa ataactgctc caccttccca ttgagccatc ttgagaatct
     7201 ccatcatcct ttttcttaac aatttgtacg gaagatcata ttgattcttg ttagccataa
     7261 gcattagatg aattggtttt tgtccagttc tttctgcata ctcttcaatt cttcttgttg
     7321 ctctgtttgc ctgtcttgct atccatttaa ggtaacaatg aatgcacgat ggtctatagc
     7381 aagaacgctg gtattgtttt atgtaatttc gccttccttt tcccagcttt tcatgtaatt
     7441 tgtttttcag gcaaccaata gttgtccaga tgccacacca gtcatattta tcaagagtgc
     7501 aaggaaggat ccatccgtcc tgtccaacag tcatccaatt tgacaagatc ttatgttccg
     7561 tgacaaaagc tgcaaccgct gctagaattt ggttactttg tttagaggca gaacagaaat
     7621 atttaatcaa actgtcattt ttcattttca atctattttt cggatttgta tgacgggtta
     7681 ttgagaatat tcaggccaca attgactagc
//
LOCUS       DASPUS010000122         2603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1708616, whole genome shotgun sequence.
ACCESSION   DASPUS010000122 DASPUS010000000
VERSION     DASPUS010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2603)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1708616"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(16..816)
                     /locus_tag="VEJ68_02740"
     CDS             complement(16..816)
                     /locus_tag="VEJ68_02740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05718.1"
                     /translation="MGLFGRSKKESEKLEAQKDHLQEKISEQSQKEESQKELDELRKE
                     IEDNASMLDSYSRELENIKSELDLATKDTQDARDELASVKSEISSIEGQRDLVLEQIK
                     GAKTDLEMIKSQYNQKETEEIRRQTEQIRDEMYSISSEKERKISELDELETSISSSRS
                     ELDELTSTIQKEKSELDSLKSQQEAKKKEIQNTKNELEFIEKELSSVGRKDDTKKIIE
                     AAGAITASIKAKYEAANKELEVLKVALARAKEEYAEVRKELDLLKAKL"
     gene            complement(888..1079)
                     /locus_tag="VEJ68_02745"
     CDS             complement(888..1079)
                     /locus_tag="VEJ68_02745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05719.1"
                     /translation="MAHNEYNRPRGSGMILIAIGILIFVFAPGYVKSNTSLGVVAAVI
                     GFLLGGVGFYISFIKKRKN"
     gene            complement(1082..>2603)
                     /gene="lysS"
                     /locus_tag="VEJ68_02750"
     CDS             complement(1082..>2603)
                     /gene="lysS"
                     /locus_tag="VEJ68_02750"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010194440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0017101 - aminoacyl-tRNA synthetase
                     multienzyme complex [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HXX05720.1"
                     /translation="REKMLGRSTNLIRVESGLGASGIPHIGSLGDAVRAYGVKLALEN
                     LGYKSELIAYSDDMDGLRKIPEGLPDWLKDHIAKPVSFIPDPFGCHDSYGLHMSSLLL
                     DGLDKLGIKYKFQRGIDTYKTGLLKDQIHTILTNSKKIGEKISEMVGQEKYQETLPYF
                     PVCSNCGRLYTAIAYEYLPDEKKIRYKCTGTTIGSKILDGCGNDGIADVTKDLGKLAW
                     KVEFAARWQAFDIRFEAYGKDIMDSVKVNDWVADEILNFPHPTHVKYEMFLDKGGKKI
                     SKSLGNVVTSQAWLKYGTPKSILLLLYKRIVGTREVGFEDIPALMDEYHELDNIYFGK
                     IKPDNEMKVIKSKGLFEYVNLINPPKTTSPYVNYRLLIQLGKIFREERVQRVTKKLIE
                     YGTIKESSPEIESLITLAGNYADDFDKPSKVEVHVDDDTRKSLSELSKALSSENEPAD
                     LQNLIYQIAKDNGVQPKDFFKTLYQIILASERGPKLGPFILDIGRKKVATTISEYI"
BASE COUNT          637 a          546 c          432 g          988 t
ORIGIN      
        1 tgttacattt ttaccttaaa gttttgcttt aagcaaatca agttcttttc ttacttctgc
       61 atattcctct tttgctcttg ctagtgcaac tttgagaact tccaattctt tatttgcagc
      121 ctcatatttt gctttaattg aggctgtaat agcacctgct gcctctataa tctttttagt
      181 atcgtctttt ctccccactg aggaaagttc tttctctatg aattccaact cattttttgt
      241 attctgtatc tcttttttct tggcttcttg ctgcgatttt aatgaatcaa gctcagattt
      301 ttccttttga atcgtagatg ttaattcatc aagttctgat ctggatgaac ttatgcttgt
      361 ttccaactca tcaagctcag aaatttttct ctctttttct gagcttatgg aatacatctc
      421 atctctaatt tgctcggttt ggcgtcttat ctcctctgtc tccttttgat tatattgtga
      481 ttttatcatc tcaagatccg tctttgctcc tttgatctgt tctagcacca agtcacgctg
      541 accttcaatt gaggaaattt cggacttaac agacgcaagt tcatcccttg catcctgtgt
      601 atcctttgtt gccaagtcca gctctgattt gatattctca agttcgcgag aatacgaatc
      661 taacatacta gcattatctt caatctcttt tcttaactca tcaagttctt tttgggattc
      721 ttctttctga gattgttctg atattttctc ctgaaggtgg tctttttgtg cttcaagttt
      781 ttcagattcc ttttttgaac gtccgaagag gcccatcaat agagcttttg tttatggtaa
      841 gaaaaggatt tcctctttcc tactcatgaa aaaagttagg tgatgttcta gttctttctt
      901 ttttttataa atgatatgta aaatcctact ccgcctagta gaaaaccaat tactgctgca
      961 actacaccta atgatgtatt acttttaaca tatccaggag caaaaacaaa gatcaagatt
     1021 ccaattgcaa tcaagatcat tccgcttcct cgaggtctgt tatactcgtt atgtgccatt
     1081 gttaaatata ctcggatatt gttgtcgcta ctttttttct tcctatatcc aatatgaaag
     1141 gacctaattt gggaccacgt tctgatgcta gaattatttg atacaatgtc ttgaaaaagt
     1201 ctttgggttg aacaccatta tcttttgcaa tttgatatat caaattttgt aggtcggctg
     1261 gttcgttctc ggatgacaag gccttggata attcagataa tgattttctt gtatcatcat
     1321 caacatgtac ctcaactttt gatggcttgt caaaatcatc agcatagttt cctgccaagg
     1381 ttatgagtga ttcaatttcg ggtgacgatt cttttattgt tccgtactca atcagttttt
     1441 ttgtaactct ctgaactctt tcttctcgaa atatttttcc taattgaatg agcagtctat
     1501 agttgacata gggcgaggtg gtctttggtg gatttattag atttacatac tcaaaaaggc
     1561 ccttggattt tattactttc atttcgttat ctggttttat ctttccaaag taaatattgt
     1621 caagttcatg atattcgtcc atcagtgcag gaatgtcctc aaaacccact tcacgtgttc
     1681 ctacaattct tttgtataat agtaacaaaa ttgattttgg agttccatat ttgagccacg
     1741 cctgagaggt gactacgttt ccaagagatt ttgatatctt ttttccaccc ttgtcaagaa
     1801 acatctcgta ttttacatgg gtaggatgag gaaaatttag tatctcgtct gcaacccagt
     1861 catttacttt taccgaatcc attatgtcct tgccgtacgc ttcaaacctg atatcaaagg
     1921 cctgccatct ggctgcaaac tctaccttcc atgctagctt tccaagatct tttgtaacgt
     1981 cggcaatacc gtcattacca catccatcaa gaatctttga tccaattgta gttccagtgc
     2041 atttgtacct gatttttttc tcatctggta aatattcata ggctatagcg gtgtacaatc
     2101 ttccgcaatt tgagcaaaca ggaaagtatg gtagtgtctc ttggtatttt tcttggccta
     2161 ccatctcgga tatcttctct cctatctttt tgctgtttgt cagaatggtg tgaatctggt
     2221 cttttagtag tcctgttttg taagtgtcga ttcctcgttg aaatttgtat tttattccaa
     2281 gtttgtcaag cccgtcaaga agtaagctgc tcatgtgtaa tccgtaagaa tcatggcaac
     2341 caaaagggtc cggaataaat gaaacaggtt ttgcaatatg atcttttagc cagtctggca
     2401 agccttctgg aatctttctc agcccgtcca tgtcatcaga atatgcaatc aactcagact
     2461 tgtatccgag attttctaag gcaagcttta ctccatatgc tctaactgca tcgcccaagc
     2521 ttccgatgtg cggtattcct gacgcgccta ggccactctc cactcttatt agattggtac
     2581 ttctgcccaa catcttttct ctt
//
LOCUS       DASPUS010000123         2730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1709482, whole genome shotgun sequence.
ACCESSION   DASPUS010000123 DASPUS010000000
VERSION     DASPUS010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2730)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2730
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1709482"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            166..903
                     /locus_tag="VEJ68_02755"
     CDS             166..903
                     /locus_tag="VEJ68_02755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05721.1"
                     /translation="MKTRLLLTSIVAITIVASLGLGSIPGQIVTSAYGASPPQCTTVT
                     VPVPGGSQVATYFISPTYNGQCLVNKSSFATSNPCTVTNGIATAGYCEAVAQGYKITP
                     NGTASLPTEEWFHFNGITLQPGQFLDMVDTTPFLTTKGHVAMVLPCDSAGTPQAKLYE
                     GIIDAGMSTIEQPDIEYLQQLSSPGSAVGTYDGTCVYHFDIGTTTNNPMGVTDFALVN
                     TSSQSVTFGERNTSTFSIAEGFLDTKA"
     gene            1200..1421
                     /locus_tag="VEJ68_02760"
     CDS             1200..1421
                     /locus_tag="VEJ68_02760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05722.1"
                     /translation="MTTHNNSNLKSRHLLFGVLILFVIVTILPHALAITFTNADNPSG
                     PLSGLGWAAGIATAGVAAGVGVWTATKRR"
     gene            1644..2135
                     /locus_tag="VEJ68_02765"
     CDS             1644..2135
                     /locus_tag="VEJ68_02765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05723.1"
                     /translation="MNNQYVWVVIVIVGIVGGIEIGFAISNIHPYRMHYEMMNSMYGG
                     YDGYGMYGGYDGWYQHSGYMMMQNSDFRQQMYSTMFGNPQYRQEMSEYLAQNPQAMYD
                     WHYTMMNNPHAMQTMMNSPQHLQLMQKMMGNLTDGNGMMGMMNYNHTQGTVGMGCCSN
                     MMH"
     gene            complement(2197..2457)
                     /locus_tag="VEJ68_02770"
     CDS             complement(2197..2457)
                     /locus_tag="VEJ68_02770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05724.1"
                     /translation="MAYRIMPEHTQEHLPDNSHNLRVILILLGILAGMFILVFRPFGY
                     RVFESSVGEHNIFAIILVFGIVGIVLVILQRLGIVFAERGQL"
BASE COUNT          907 a          500 c          492 g          831 t
ORIGIN      
        1 ttatcgaata taccagttgt aaaattaatt tttgaataaa aaactatttg gaaatgaaag
       61 acgtttttct cctgtgtcaa tttatataaa acatatactg tctaaaacaa ttcattttac
      121 gaatgtacca ttctcttcaa atatttttaa caaaattggt cattaatgaa gacaagatta
      181 cttctaactt caattgtagc aattacaatt gtagcatccc ttggcttggg ttcaatacca
      241 ggtcaaatag tgacttctgc atacggtgca tctccgccac agtgtaccac agtaacggta
      301 ccagtgccag gcggttctca ggtagcaaca tactttattt caccaacata caacggacaa
      361 tgtcttgtga acaaatcgtc ttttgcaacc tcgaatccat gcactgtgac aaatggtata
      421 gcaacggcag gttattgtga agctgtagct cagggttata agataacacc aaatgggact
      481 gcgtctcttc ctactgagga atggttccat ttcaatggaa ttactctaca gccaggacag
      541 tttcttgaca tggtagatac gactccattc ttaactacca aaggtcatgt tgcaatggtt
      601 ttgccatgcg actcggcggg aactccacaa gcaaaattgt atgagggcat aatcgatgct
      661 ggaatgtcaa caatagaaca accagatatt gaatacctcc aacaattgtc aagtcctgga
      721 agtgccgtgg ggacttatga tggaacgtgt gtatatcact ttgacattgg aacaactaca
      781 aacaatccaa tgggagtaac tgactttgcc ctagtaaaca ctagtagtca atcagttact
      841 tttggagaga gaaacacatc aacattttcc attgcagaag gtttcctaga cacaaaagca
      901 taaaaaatta taatcccttt ttttattttt taaataacga ataatctgat aaattttttc
      961 aaaagtatgc gctctaaata aacgtcattt tgattttatc ttacacaaat cattatgcat
     1021 tataatcata acatgtagtc aaagtttaat tgcataataa aaaatagaac atgataagtg
     1081 gactaactcc ctccttgcca tcttctactt taaacgttca tcaaaatcat atttcaataa
     1141 tatggtacaa tccacaaatg taccggtata ttcaaatttc aagttgatgt aaacaatcca
     1201 tgacaacaca caacaattca aatttaaaat caagacactt gttgtttggt gttttgattt
     1261 tgtttgtcat tgtgaccatc cttccacatg ctttggcaat aacgtttacg aatgcagaca
     1321 acccctcagg acctctttca ggcctcggtt gggcggcagg aatagcaaca gctggtgtcg
     1381 cagctggtgt tggagtttgg actgcaacta aacgcagata aattccagtg ggtgatcacc
     1441 tttcttattt tagactgcgc tctataagat aaatggcaat tcctgaattt atatttaaaa
     1501 cgagtacaaa tgcaagtacc tttacttata gcaacaacaa gatgtaagag ttggtataat
     1561 tgctcttatt catttcttgt agctaatttt caattgtgat attcttcttc cttctataaa
     1621 ttatagaaga ggtattaaat tctatgaata atcaatatgt ttgggtagtg atagtaatcg
     1681 taggaatagt tggtggaata gaaatcggtt ttgcaatttc aaatattcat ccctacagga
     1741 tgcattatga gatgatgaat agtatgtatg gtggatatga tggttatggt atgtacggcg
     1801 gttatgatgg atggtatcaa cattcgggat atatgatgat gcaaaattct gattttagac
     1861 agcagatgta ttctaccatg tttggaaatc cacaatacag acaggaaatg tcagaatact
     1921 tggcgcaaaa cccacaagca atgtatgatt ggcactatac catgatgaac aacccgcatg
     1981 ccatgcagac aatgatgaat agtcctcaac acttacaatt aatgcaaaaa atgatgggaa
     2041 accttaccga tggaaacggc atgatgggaa tgatgaatta taaccatacg caaggaactg
     2101 ttggaatggg ttgttgtagt aacatgatgc actagtttta tccgcagaaa gatagacgaa
     2161 gtggaaacat ccaaaacaac cagggccaga atagctttac agttgtccac gttctgcaaa
     2221 aactattcct agtcgttgca atattactaa aacaattcct acaataccga aaaccagaat
     2281 tatggcaaat atgttatgtt ctcctacact actttcaaat actctgtaac caaatggcct
     2341 aaaaacaaga atgaacatac cggcaagtat tccaagaaga ataaggataa ctctgaggtt
     2401 gtgtgaatta tcgggcagat gttcttgggt atgttctggc attattctat atgccatagc
     2461 cgaagataaa aatctctttg tggtacattt tatgattgta ccaattctct tatcatctga
     2521 aatgcttaca cacactcaac tgtctatcgt agacttcatc ctgttctgtt ctgctgtgtg
     2581 agaatctcac acagcaagtt caagaacaga ttacaaagaa tacatcgttt acccatcaat
     2641 tttgaacgag gctaatgtca atcatgaatt gatagaacaa ataaaaaaag agtgttttac
     2701 ttctcagttg gaagtttggt gaacactttc
//
LOCUS       DASPUS010000124         2340 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_473560, whole genome shotgun sequence.
ACCESSION   DASPUS010000124 DASPUS010000000
VERSION     DASPUS010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2340)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_473560"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..584)
                     /locus_tag="VEJ68_02775"
     CDS             complement(30..584)
                     /locus_tag="VEJ68_02775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05725.1"
                     /translation="MSIETFLLEIENRKKKEIESLEKDLAEKKSKLQAEMNITVKEIQ
                     EKFANESKIKSEREYARIIEAGKLQAKKIMFDAINANMQSAFAVMEKEIETYTKSPQY
                     KKALETMVNSSKKKLGQNIVVHCRDEDKSSLKDLGVTIGNSIKTLGGIVAENKEGTKE
                     LDLTFEELLRIHEDQIKSYLSEKM"
     gene            complement(595..939)
                     /locus_tag="VEJ68_02780"
     CDS             complement(595..939)
                     /locus_tag="VEJ68_02780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HXX05726.1"
                     /translation="MAFNKRSKLSLIIITVGLTIALSTFVSTMPAFAQTSGTTNSALT
                     KPLLAIAAAIAIAGGLIGTGNAQQGIGAAGMGIIAEKPEKFGQVLFFFVIPETLWIIG
                     FVLGIILLLGIL"
     gene            complement(1070..1849)
                     /locus_tag="VEJ68_02785"
     CDS             complement(1070..1849)
                     /locus_tag="VEJ68_02785"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HXX05727.1"
                     /translation="MLINPQDLMKIIDKHNVIIVDCRSYKEYAEGHIPGSVNVDLFYY
                     HWSDTTKDGVKAFEKQMKNLLSFVGVTTKKKVIFYDEVAGMSAARGVWLLKYFSHPSV
                     FMLDGGFKKWKILGLPIEIKTNGFKPSKFSGRINKSILADFVHIKKNLNKIKLIDART
                     KEEYNGTVIRAARRGHIPKAVNIDWVLNINEDGTMKSKEDLAKLFNLSKNDEIVTYCQ
                     GGYRAANSFVALKRLGFKNVKVYLGSWGEWGNRLNLPIEGD"
     gene            2099..>2340
                     /locus_tag="VEJ68_02790"
     CDS             2099..>2340
                     /locus_tag="VEJ68_02790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05728.1"
                     /translation="MKNKKIVPRLSVFQTFKTKDREFTGEAMRQRGIVMHLAMETLPT
                     RKTRTAIAHKLAEKNDTTWQNIYSGIFRDLDEILLP"
BASE COUNT          711 a          445 c          365 g          819 t
ORIGIN      
        1 aaggatgatg catattgtga tgtgggcaat tacatcttct ccgaaagata acttttgatc
       61 tgatcttcat gaattcgcag taattcctca aaagtaagat caagttcttt tgtgccctcc
      121 ttattttctg caactatacc acctagagtt ttaattgaat tacctatggt aactcccaaa
      181 tcctttagag atgatttgtc ttcatcacga caatgaacca ctatgttttg tccgagtttt
      241 ttcttcgagc tgtttaccat agtttcaaga gcctttttgt attgaggact ctttgtataa
      301 gtttcaattt ctttttccat aacagcaaat gctgactgca tgtttgcgtt aattgcatca
      361 aacatgatct tttttgcttg aagttttcca gcttcgatta ttcgagcata ttctctttca
      421 gatttgatct ttgattcatt tgcaaacttt tcttgaatct ctttaacagt gatattcatc
      481 tctgcctgaa gtttagattt cttttctgct aggtcctttt caagactttc aatttctttt
      541 ttctttctgt tctctatctc aagaaggaaa gtctctatgc tcattactga accactatag
      601 gatacctagc agtaagatta ttcccaatac gaatccaatg atccataagg tttcgggaat
      661 aacgaagaag aatagcactt gaccaaactt ctccggcttt tctgcaatga tacccatacc
      721 ggctgcacca ataccttgtt gtgcattacc agttcctatc aaaccaccag caattgcaat
      781 agctgcagca attgcaagta atggttttgt taatgcactg ttagtagttc cagatgtttg
      841 agcaaaagcc ggcatagttg aaacaaatgt agaaagtgca atcgtcaacc ccacggttat
      901 gatgataagt gataacttgg aacgcttgtt aaacgccatt atgatgctca tttgttgagg
      961 gtatattaat ctaattctta gaaaccttaa attcattttt tcaaaaaata tgaaaactta
     1021 ttgtgcgatc atcgtacatt gtaatttctt tttcataata tttacgagtc taatcccctt
     1081 ctatggggag gtttagccta tttccccatt caccccaaga accaagatag actttcacat
     1141 ttttgaagcc cagtcttttg agtgccacaa atgaatttgc ggcacgataa ccaccctgac
     1201 aataagttac aatctcatca ttttttgata agttgaacag ttttgcaaga tcttcttttg
     1261 atttcatggt tccgtcttca tttatgttca atacccagtc aatgtttact gcttttggta
     1321 tgtggcctct tctggctgca cgtatgactg taccattgta ttcttcttta gttctagcgt
     1381 caattagctt tattttgtta agatttttct tgatatgaac aaaatctgcc aatatgcttt
     1441 tgtttattct tcctgagaac tttgatggtt tgaaaccatt tgtctttatt tctatgggta
     1501 atccaaggat tttccatttt ttgaatccac catcaagcat gaaaacagat ggatgagaga
     1561 aatacttcag gagccatact cctcgagcag cactcattcc agccacttca tcataaaaga
     1621 taactttctt ttttgtagtc acacctacaa aagatagtag atttttcatt tgtttttcaa
     1681 atgcctttac tccgtctttt gttgtatctg accagtgata ataaaatagg tctacattaa
     1741 cagaaccagg aatatgacct tcagcatatt ctttgtaaga tctgcaatca acaataatca
     1801 cattgtgctt atcgattatc ttcattagat cttgaggatt aatcagcatg agattactct
     1861 aacatggcca attaaattca tttcacaagt ataccattat ggctataaca agacacaaaa
     1921 gatttcatta aatttgtgta cataatatgt tacgtatttg aaaaagtcat aatttgttat
     1981 aattttttca aaatcgtaaa ttcttatatc ttaccggaat atgataatat cacaaaatgg
     2041 ccattctaga ttatcaagat aataatcaac ttggattaaa actaggaata aaaaaatcat
     2101 gaaaaacaaa aagattgtac caagactatc ggtttttcag acttttaaga ctaaagacag
     2161 agaattcacg ggagaggcaa tgcgtcaaag aggaatagtg atgcatttag ctatggagac
     2221 tctacctact agaaaaacac gtacagctat tgcacataaa cttgcagaaa aaaatgacac
     2281 cacttggcaa aatatctatt caggaatatt cagggatctc gacgagatac ttcttccatt
//
LOCUS       DASPUS010000125         3689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_209076, whole genome shotgun sequence.
ACCESSION   DASPUS010000125 DASPUS010000000
VERSION     DASPUS010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3689)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3689
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_209076"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..458
                     /locus_tag="VEJ68_02795"
     CDS             <1..458
                     /locus_tag="VEJ68_02795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05729.1"
                     /translation="EFTYDDGLKINSATFDIATPGVKIPTQTLYVGAHNTITVKIYQD
                     GGPYYLMGGAMLLNVHGSNPVSSASDTYIQWDKFGGVTVQDPHHVLSNVKVSMKDDQH
                     FKYVTFSFTPKAPMKTTDIIFNAWNLSLSVGSTSVIDGINFQYVPQGYH"
     gene            590..1192
                     /locus_tag="VEJ68_02800"
     CDS             590..1192
                     /locus_tag="VEJ68_02800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide isomerase"
                     /protein_id="HXX05730.1"
                     /translation="MGKKEREEREQERESFYDKRQKQQFKYKAIGLGVLAGIVAVLGI
                     SSYNFYELSSHVTPAGMPVGAGPLGGINIKAGLLTLIYGQQFDYSSPAYQVKSRYIDF
                     EKGNGEIVHMHAANVTMSFLFDSLKIGLTDKCFTFPDKRSFCTNDKYSMKFFINHHQI
                     EDIRNYVFNDGDRILISYGNENATQISNQLAGLDAFNLNS"
     gene            complement(1189..1986)
                     /locus_tag="VEJ68_02805"
     CDS             complement(1189..1986)
                     /locus_tag="VEJ68_02805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05731.1"
                     /translation="MVEIKLTFFAIFLVLLAESLAIPAYAEVNSFQTDKSFYVQGNKI
                     IFSGTVEIGDYQKHVNLVIHSPLGKFVLISGNYSDSIYTFEIVVNTNDTNQFSTTGTY
                     SATAFIGDPSSGKTIAFDFSPDGSPVIHQPPQNSNSESTNTNQPNAQHYVTQLNENIT
                     MSDVRENQMKGNPSIIEKPPITFDFMTILYPVISLCGVGIVIAVIYFRKINLKPNIQK
                     KDKSQSIQQVISESDDDHAMLILKNRLAKGEITLEEFKAVKDALSEF"
     gene            2136..3395
                     /locus_tag="VEJ68_02810"
     CDS             2136..3395
                     /locus_tag="VEJ68_02810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05732.1"
                     /translation="MNNNLANNLRHLIMILIIAGCIVPLQHYSFAQISQQGIATSNMG
                     SQIQFDKKVFSWTDRVYITIYAPDFNFDPNNIDTIGETQDDKVTVCTTGHCIPYKLSE
                     TGSDTGIFSGYVTLTGDPTVKGSSGIDGQGMNPSGEMSTCNPTCGPRDGFLPSTGNDG
                     VSISFEYTRNQVVTGSALIRWSNGAISWLQPNYPANGQAVLQITDPDMNINPDAIDKF
                     DTNVWSDSDSSGTTITMTETDKNSGIFQGTIYFSTNLTSSGNRLHVSDGDTVTGEYID
                     RTLPPPYSPSSQVRLLATTIIGTNLPPLERVPASNPRILDSMSNVLNKVTVNQQIQIV
                     SDLTNKNNNNQPFAYLVQIQDYNGITLSLSWITGSLSPNQNISLSQSWTPKTTGTYNA
                     QIFVWRGVTDPNALSSPLNLQIPVFGQ"
     gene            3465..>3689
                     /locus_tag="VEJ68_02815"
     CDS             3465..>3689
                     /locus_tag="VEJ68_02815"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HXX05733.1"
                     /translation="MEISSRNVVEGSSRAPHRAMYKAMGLTDDDLDKPFIGVSHTGDE
                     ATPCNIHLGRLALQAKAGVEDAGGTPREFST"
BASE COUNT         1238 a          671 c          683 g         1097 t
ORIGIN      
        1 cagaatttac ctacgatgac ggactcaaaa ttaactctgc tacctttgac atcgcaaccc
       61 ctggagtgaa aataccaact cagacattat acgtaggagc acacaataca atcacagtaa
      121 agatatacca agacggcgga ccatattacc taatgggcgg tgcaatgctt ctaaacgtac
      181 atggatcaaa tccagtcagt tcagcaagcg acacctacat acaatgggat aaatttggcg
      241 gcgtcacagt gcaggatccc catcacgtat taagtaacgt aaaagtctcg atgaaagatg
      301 atcaacactt caaatatgtc acatttagct ttactccaaa agcacctatg aaaacaacag
      361 acatcatctt taatgcatgg aatttatcgc tttcagtggg gagtacttca gtcattgacg
      421 gaataaactt ccaatacgtg ccacaaggtt atcattaaat caattcccta aattttgtaa
      481 ttttttcatc aatcctagtg ctattactga atatggcata aaaataaaga cttgatttaa
      541 gatcgttgat atagttaatt aagggtgaaa ttttgacgtt tatcgttcca tgggcaaaaa
      601 agagagagaa gagcgagaac aagagcgtga gagtttctat gataaaagac agaaacaaca
      661 gtttaagtat aaagcaattg gactcggagt tttggcgggc attgttgcag ttctgggcat
      721 ctcaagttac aatttttacg aattatctag ccatgtaact ccggcaggta tgcccgttgg
      781 ggcaggacct cttggcggca tcaacatcaa agctggattg ttgaccttga tttatggaca
      841 acagtttgac tattcatcac cagcatatca agtgaaaagc aggtatattg attttgaaaa
      901 ggggaatggc gaaatagtac acatgcatgc cgcaaatgtt acaatgagct ttctttttga
      961 ttctttaaag attggtctta ctgacaagtg ttttacattt ccagataaac gtagtttttg
     1021 tacaaatgat aaatatagta tgaagttttt cataaaccat catcaaatag aagatatccg
     1081 taattacgta ttcaatgatg gggacagaat tctcatctca tatggaaatg aaaatgcaac
     1141 tcagatatca aaccaattgg ctggactaga tgcatttaat ctaaatagtt aaaattcaga
     1201 taaagcatct tttactgctt tgaattcctc aagagtgatt tctccttttg ccaacctgtt
     1261 ctttagtatt agcatagcat gatcatcatc tgattcagaa atcacttgtt gaattgattg
     1321 tgatttatcc tttttttgta tatttggttt caagtttatc tttctaaaat aaatgacggc
     1381 aattacaatg ccaacaccac agagagaaat cacaggatac agaatagtca taaagtcaaa
     1441 agtaatgggt ggtttttcta taattgatgg gtttcccttc atctgatttt ctctaacatc
     1501 gctcatcgta atattttcat ttaattgagt cacgtaatgc tgtgcatttg gttgattagt
     1561 attagtagat tcagaattag aattttgtgg aggttgatga attacaggag aaccatccgg
     1621 agaaaaatca aaggcaatag ttttaccgct acttggatcc cctatgaagg cagttgcact
     1681 atatgtccct gttgtagaaa actgatttgt gtcattggta ttaacaacaa tttcaaatgt
     1741 gtaaatagaa tcggaataat tgccagatat tagtacaaat tttcctaaag gactgtgaat
     1801 tacaagattt acatgttttt ggtaatctcc tatttcaacc gttcctgaaa aaattatttt
     1861 gtttccttgt acatagaatg atttgtctgt ttgaaacgaa tttacttcag cataggctgg
     1921 aattgccaaa gattctgcca aaagcaccaa aaatatagca aaaaaggtca atttgatctc
     1981 taccatgcta aagtgtgaac cgttaaaatt attaaaaatg cgtagaattc attcttttca
     2041 agagattgcc aaaagaaaat gaccaaaatt cggtcttgga tacttgagga tacaaatgac
     2101 aaagtacaaa atgtgtgttt taactataat aattattgaa taacaattta gcaaataatt
     2161 tgagacatct cattatgatt ttaattattg ctggatgtat tgtacccctt caacattatt
     2221 catttgcaca aatatcacaa caaggaattg ctactagcaa catgggaagt cagattcaat
     2281 ttgataagaa agttttcagt tggacagacc gcgtgtatat tacaatatat gcgcctgatt
     2341 ttaacttcga tccaaataat atagatacga ttggagaaac acaggatgat aaagttacgg
     2401 tatgtaccac aggccattgc atcccataca agctgtctga aactggttct gacacaggaa
     2461 ttttttcagg atatgttact ctaacaggtg atcctacagt aaagggcagt tcagggatcg
     2521 acggtcaggg aatgaaccca tctggagaaa tgtcaacgtg caacccaaca tgtggaccaa
     2581 gagatggttt tctgccaagc actggaaatg atggcgtgtc gatttctttt gaatacacac
     2641 gcaaccaagt tgtaacaggt tctgcattaa tacgctggag taatggagca ataagttggt
     2701 tacaacccaa ttatccggca aatggtcaag ctgtcttgca gatcacagat cctgatatga
     2761 acatcaatcc tgatgcaata gacaaatttg atacaaatgt atggtcagat tctgattcta
     2821 gtggaactac aatcacaatg acagaaaccg acaaaaattc tggtattttt caaggaacta
     2881 tctattttag tacaaacttg acatcttctg gaaatagatt acatgtatcg gatggagaca
     2941 cagtgacagg agagtatatc gatagaacac ttcctcctcc ttattcacca tcttctcaag
     3001 tacgtcttct tgcaaccacc ataataggaa caaatctacc cccacttgaa agagtgccag
     3061 caagtaatcc aagaatattg gattccatga gtaacgtttt gaacaaggtt acagtaaatc
     3121 agcaaatcca aattgtatct gatttgacta acaaaaacaa taacaatcag ccatttgcgt
     3181 atcttgtgca aatacaagat tataacggaa tcacgctatc gctttcatgg ataacaggtt
     3241 cgttatcccc taaccaaaat atcagtctta gtcaatcatg gacacctaaa accacaggca
     3301 catacaatgc tcagatattt gtatggcgag gagttacaga tcctaatgcc ctttcatctc
     3361 ccttgaattt gcaaatacct gtttttggac aatagaacta ttatttttct catgggtttc
     3421 aattaaaggc taaaattaca ccttgcccac ctcttgatat tctcatggaa atatcaagta
     3481 gaaatgtagt tgaaggttcg tctagagcac cccatagagc aatgtacaaa gcaatgggtt
     3541 taacagatga tgatttggat aaaccgttca taggtgtatc acatacagga gatgaagcaa
     3601 caccgtgcaa tattcatctt ggtagactgg cacttcaggc aaaagctgga gtggaggatg
     3661 ccggtggaac acccagagaa ttttccaca
//
LOCUS       DASPUS010000126         3840 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1711078, whole genome shotgun sequence.
ACCESSION   DASPUS010000126 DASPUS010000000
VERSION     DASPUS010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3840)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3840)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3840
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1711078"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..999
                     /gene="carA"
                     /locus_tag="VEJ68_02820"
     CDS             <1..999
                     /gene="carA"
                     /locus_tag="VEJ68_02820"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HXX05734.1"
                     /translation="DPSYSGQILALTYPLVGNYGVPDLSTKDSDGIKQYFESDKIQAR
                     GLVVHELSLTASHWNLTMTLDEWLYNEKIPGISGIDTRALTMKLRTNGVMMAALAVSD
                     KEIDEKDLKKKLESAKKYNDEEFMDTVSVKEPQEYGTGNEAIVVVDTGVKNAILRNVR
                     NLGYKVIRVPWNYSIEKILSYSPKGVVLSNGPGDPEKCVATMKTAKTLIDKNIPTLGI
                     CLGAQILGLAGGASTYKLKYGHRGQNKSCLDLDNNHVYVTSQNHGYCIDPESLKKTDF
                     KLWFSNTDDKTVEGIKHKEKKIIAVQFHPEASPGPFDCMFVFEELKKLIGGTNAKR"
     gene            1130..>3840
                     /gene="carB"
                     /locus_tag="VEJ68_02825"
     CDS             1130..>3840
                     /gene="carB"
                     /locus_tag="VEJ68_02825"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) large subunit"
                     /protein_id="HXX05735.1"
                     /translation="MKSVLVNPNIATIQTDTRFADKVYSIPVNPQYVESIIEVERPDA
                     LMLGFGGQTALNCGVRLEDLGILKKYGVKVLGTQIKGIKATEDRQLFKDAMIECGVPV
                     LKSKTVYNFEEAKKVAKELGYPVIIRVAYTLGGKGGGVAHNEIELHEIVSRGLNASLV
                     GQVLIEEYVGHWKQIEYEVMADYHGNNVIICNMENVLSMRVHTGDNIVVAPSQTLNNY
                     EYQMLRSAALRAAKHVGIVGECNIQFALDPNSDKYVAIEMNPRLSRSSALASKATGYP
                     IAYMAAKIVMGYNLSELVNRITKTTTACFEPSLDYIVCKHPRWDFSKFELANRSLGPT
                     MKSVGEVMAIGRCFEESLQKSIRMLEIGNDGLVANRTSDKQYDIEELEDKLQKSDDKV
                     LYHVAAALRQGMTVKQIYKLSAIDPWFIEKIKNIVELEKKVKESKLEKEILQEAKILG
                     FSDKQIGRLTGKDDLDIRRIRKENGILPVVKRVDTLAAEWPAQTNYLYMTYGGKNNDF
                     EITSDSEKIAVLGAGPYRIGSSVEFDWGTVNMVWGLKENGVKEVSVINCNPETVSTDY
                     DICDRLYFEELTLERVLDIAEFEKLTGIVTAVGGQTANNLTPKLAKNGIKIIGTSYED
                     IDKAENRSNFSKVLDELHIRQPPWQAFSSLVDAKKFAVKVGYPVLVRPSYVLSGAAMK
                     VVWSEKELKKYLEDATNVSPDYPVVITKFMLNSLEAEVDGVSNGKDVVIGAVIEHIEG
                     AGVHSGDSMMCIPPWSLSNKVVETILDYTNKIATAFKIKGPFNLQFLINADQVYVIEL
                     NIRASRSMPFVSKFVKMNLISLAARAVLGKSLPKIPKDRWRKIHSYGIKVPQFSFMQL
                     EGADIILGVEMQSTGEAACFGDSFYDALAKGLVSVGYSLPKEGSVLIT"
BASE COUNT         1332 a          657 c          867 g          984 t
ORIGIN      
        1 gatccttcat acagcgggca gatactggca ttaacttatc cattggttgg aaactatggg
       61 gttcctgact tgtcaacgaa ggattcagat ggtataaaac aatatttcga gtcagacaaa
      121 attcaggcac gaggactggt agtccatgag ctctctctaa ccgcgagcca ttggaacctt
      181 acaatgacac tagacgaatg gttatacaat gaaaaaatcc cgggaatttc tggaattgat
      241 actcgtgccc taacaatgaa actacgtaca aacggtgtga tgatggcagc acttgcagtc
      301 tctgacaaag agattgatga aaaagacctc aaaaagaaac tcgaatctgc caaaaaatac
      361 aatgacgaag aattcatgga tacggtttct gttaaagagc cgcaagagta tggaacagga
      421 aatgaagcaa tagtggtggt agatacagga gtaaaaaatg caatattgag aaatgtgaga
      481 aatcttggtt acaaagttat ccgcgtgcca tggaattatt cgattgaaaa aatactgtct
      541 tacagtccca aaggtgttgt attatcaaac ggacctggag acccagaaaa atgcgttgct
      601 acaatgaaaa ctgcaaaaac actcattgac aaaaacattc caacactagg gatatgtctt
      661 ggtgcacaaa tcttgggact tgcaggagga gcaagcactt acaaactaaa atatggtcat
      721 cgtggacaga acaaatcttg tcttgatttg gacaataatc atgtgtatgt tacaagtcaa
      781 aatcatggtt actgcataga tccggaatct ctcaaaaaaa cagatttcaa gttgtggttt
      841 tcaaacacag acgataaaac agttgaggga ataaaacaca aagaaaaaaa gattattgca
      901 gtacaatttc atccagaagc ttcgcctgga ccttttgatt gcatgtttgt ttttgaagaa
      961 ctcaagaaac tgataggagg tactaatgcc aaaagatgaa tcactaaaga agattctagt
     1021 tcttggcagt ggggcaatta aaatcggaga agcaggcgaa agtcagtaac ctgaccgcta
     1081 attcgactac tccggtagcc aatgcctcaa ggccataaaa gaagaaggaa tcaaaagcgt
     1141 acttgtaaat ccaaacattg caacaattca gacagatacg agatttgcag acaaggtgta
     1201 ctcgatccca gtaaatccgc aatatgtcga gtctatcata gaggtagaaa gaccagatgc
     1261 actaatgctt ggatttggcg gacagactgc actgaactgt ggagtaagac tcgaagatct
     1321 tggaatttta aaaaaatatg gggttaaggt tctaggcacc cagataaaag gaatcaaggc
     1381 cacagaagac aggcaactct tcaaagatgc catgatagag tgcggtgttc ctgtactaaa
     1441 gagtaagaca gtatacaact ttgaggaagc aaaaaaagtt gctaaagagt taggctatcc
     1501 tgtaataatc cgagtagcat atactctggg gggaaaaggt ggcggtgttg cacacaacga
     1561 gatagagcta cacgaaatag tgtcacgggg attgaatgca agtcttgttg gtcaagtgtt
     1621 aattgaagaa tatgtggggc actggaagca gatagaatat gaagtaatgg cagattatca
     1681 tggaaataat gtcataattt gtaacatgga aaatgttctt tccatgcggg ttcatactgg
     1741 agacaatatt gtagtcgcac catctcagac actcaacaat tatgagtatc aaatgctaag
     1801 atctgctgca cttcgcgcgg caaaacatgt tggtatagtg ggagaatgca acatccagtt
     1861 tgcactggat ccaaactctg acaagtatgt tgcaatagaa atgaatccaa gactttcgcg
     1921 ttcatcggct cttgcaagta aagctaccgg ttacccaatt gcatacatgg cagcaaaaat
     1981 cgtaatgggt tacaatttgt cagaacttgt aaatcgtata acaaagacca ctactgcatg
     2041 ttttgaacca tcacttgatt atattgtatg caaacatcca aggtgggatt ttagcaagtt
     2101 tgagcttgca aatcgcagct tgggtcctac gatgaaatcg gtaggggaag tgatggcaat
     2161 aggcagatgt tttgaagagt ctcttcaaaa atcaatcagg atgcttgaga ttggaaatga
     2221 cgggctagtt gcaaacagaa cttctgataa acaatatgat atagaagaac tagaagacaa
     2281 actacaaaag tcagacgata aagtgctata ccatgtagca gctgccttga ggcaaggcat
     2341 gactgtaaaa cagatctaca aactttctgc gatagaccca tggtttattg agaaaataaa
     2401 aaatattgta gaattagaga aaaaagtaaa agagtcaaaa ctcgaaaaag agattttaca
     2461 agaagcaaaa attcttggat tctcagacaa gcagattgga agattgactg gaaaggacga
     2521 tcttgatatt cgaaggatac gaaaagaaaa cggaatttta cccgtagtta aaagagtaga
     2581 tactcttgca gcagaatggc ctgcgcaaac caactatctg tatatgactt atggggggaa
     2641 aaataatgac tttgagataa cctctgactc ggaaaagatt gcagtgcttg gtgccggtcc
     2701 ttatcgtata ggtagcagtg tggaatttga ttggggaaca gtaaacatgg tctgggggct
     2761 caaagaaaat ggcgtaaaag aggtctctgt gattaactgt aatccagaaa ctgtctccac
     2821 tgattatgat atatgtgata gattgtactt tgaggaacta acactagaac gagtactaga
     2881 cattgcagaa tttgaaaaac taactggtat agtaacagct gtaggtgggc agactgccaa
     2941 taaccttaca ccaaaactgg caaagaatgg aattaagata atcggaacat catatgaaga
     3001 cattgacaag gctgaaaaca gatcgaactt tagtaaagtt cttgatgaac tacacatacg
     3061 tcagccgccg tggcaagcat tttcaagttt ggtcgatgca aaaaaatttg cagtcaaagt
     3121 aggataccct gttctggtaa ggccatcgta tgttcttagt ggagctgcaa tgaaggtagt
     3181 atggtctgaa aaggaattga aaaaatactt ggaagatgct actaatgttt cacctgacta
     3241 tccagttgtt ataacaaaat tcatgttaaa ttctcttgaa gccgaagtcg atggggtatc
     3301 aaatggaaag gatgtggtaa taggagcagt aatagagcac attgagggtg ctggtgtaca
     3361 ttctggtgat tcgatgatgt gtattccacc atggagtctc tccaacaagg tggttgaaac
     3421 catattggat tatactaaca agattgcaac tgcatttaag ataaaaggtc cctttaatct
     3481 tcaatttcta ataaatgccg atcaagtata tgtcatagag ctgaatattc gggcatctcg
     3541 ttcaatgccg tttgtatcca aatttgtcaa gatgaatcta attagtttag ccgctagggc
     3601 agtactcgga aaatctttgc caaagattcc aaaagacaga tggcgcaaaa tacattcgta
     3661 tggtatcaag gtgccgcaat tttcatttat gcaacttgag ggagcagaca ttatacttgg
     3721 agttgagatg caatctacag gagaagccgc gtgttttgga gacagctttt atgacgcact
     3781 tgcaaaaggc cttgtatctg taggctattc tctgccaaaa gaaggctctg ttctaataac
//
LOCUS       DASPUS010000127         3223 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1567372, whole genome shotgun sequence.
ACCESSION   DASPUS010000127 DASPUS010000000
VERSION     DASPUS010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3223)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3223
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1567372"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..917)
                     /locus_tag="VEJ68_02830"
     CDS             complement(<1..917)
                     /locus_tag="VEJ68_02830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010191071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthetase"
                     /protein_id="HXX05736.1"
                     /translation="MPSMVVVGGFFGDEGKGKIVSYLAVKDNPVIAVRGGVGPNAGHT
                     IEHNNKKYKVRMLPSAFLNPNTRLLVGPGVVVSTDVLLKEISEFDVADRAFVDFNCGV
                     IEESHRISDSQGRLKDSIGSTGTGTGPANADRAMRTLKLAKDIESLALYLDDIPNAVN
                     FSLERKEKVLVEGTQGTFLSLWHGTYPYVTSKDVTASGICADVGIGPKNVDEVVVVFK
                     SFVTRVGEGPLKNEITAQQATAKGWQEVGTVTGRQRRAAEFDFDLARRAIMLNSASQI
                     AITKLDVVYPECVHMQKYSDLSSPAKYFI"
     gene            997..1458
                     /locus_tag="VEJ68_02835"
     CDS             997..1458
                     /locus_tag="VEJ68_02835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010191072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05737.1"
                     /translation="MSEPNYAGNIIVNLANLPEFLRKPILQKRLTEFFSMSQEDRREI
                     INNALQAGPTIQFDKFSTLFKTWLEILCNFSEEQRTIMFTTYLNEIVNSPQKIISFNL
                     DGIFEIYLSLTQDQQNLISATLKKIINSLPNDFKKRLYLIIPERARKKIDV"
     gene            complement(1455..1730)
                     /locus_tag="VEJ68_02840"
     CDS             complement(1455..1730)
                     /locus_tag="VEJ68_02840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(2+)-trafficking protein"
                     /protein_id="HXX05738.1"
                     /translation="MAKNCTKCKKEIPEAVELDPIAGNYPCCNECWAEWKQYRVMVMN
                     EMRLDMSMPEHRKVLKRYEKVFVGVMTPEGDVINFADENQRKPDKPA"
     gene            1800..2009
                     /locus_tag="VEJ68_02845"
     CDS             1800..2009
                     /locus_tag="VEJ68_02845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05739.1"
                     /translation="MKVKCPKCNEIAELGDDFSYVKCSHCSLDITYGEYVKFIAYKDA
                     RYADILGDYTTETEGTTTGTLDDDW"
     gene            2061..2696
                     /locus_tag="VEJ68_02850"
     CDS             2061..2696
                     /locus_tag="VEJ68_02850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05740.1"
                     /translation="MQFILETALNLLGFVVGLALGIFAYIGFKNTGSPTLFRLNISFF
                     SIGIGFGVVGFGYLIESGILSYAQIDSWIQTLGIGIQTVGYFFIAFSHGIKSFFPKSR
                     YFKSIVLPLFIIPGNSIEHIIRSISFILLVYGTIETIMSYMENRKRSTIFVAAGLGLL
                     ALGEFLGWYSIVFPKSVLYFVSVSTKVAGLGALFIPISQVPLRGVKFGSGV"
     gene            2704..2970
                     /locus_tag="VEJ68_02855"
     CDS             2704..2970
                     /locus_tag="VEJ68_02855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HXX05741.1"
                     /translation="MSIIGDILATTRDEIPDESGASVTYLIRRANVSYGRLSKILDTL
                     VQQGLLEQTSSERACKYKISERGREFLQAYRGFREFADSFGLRI"
BASE COUNT         1010 a          627 c          545 g         1041 t
ORIGIN      
        1 tttataaaat attttgcagg agagctaaga tctgaatatt tttgcatgtg tacacattct
       61 ggataaacaa catcaagttt tgtaatcgca atttgggaag cgctgtttag cattattgct
      121 cttctagcaa gatcaaaatc aaattcagca gcccttcttt gtcttccagt tacagtgcca
      181 acttcctgcc acccttttgc tgttgcctgt tgtgctgtga tctcattctt taatggacct
      241 tctccaactc tagtgacaaa agatttgaaa acaacaacta cctcatcaac attctttgga
      301 ccaataccta cgtctgcgca aattcccgat gcagtaacat ctttggatgt aacgtatggg
      361 tacgttccat gccaaagtga aaggaatgta ccctgtgtcc cctctaccag aactttttct
      421 ttacgttcta gtgaaaaatt tacagcatta ggtatatcat caagatataa tgcaagagat
      481 tcaatatctt tagcaagttt gagagtcctc atagctctat ctgcattagc aggtccagta
      541 ccggtaccag tgctaccaat agaatctttc aatcgtcctt gagaatcaga tattctatgt
      601 gattcttcta ttacaccaca gttaaaatca acaaaagctc tatctgcaac atcaaactcg
      661 gatatttctt ttagtagtac atctgtactt actactactc ctggtcccac aagtagtcgt
      721 gtattaggat tcaaaaaagc acttggtaac attcttactt tgtatttttt gttattgtgt
      781 tctattgtat ggcctgcatt agggcctact ccacctcgaa ctgctattac aggattgtct
      841 tttactgcaa gataggaaac aattttgcct tttccttcat caccaaagaa accaccaaca
      901 acaaccatag aaggcataag ggatgagcag aaatggacat atttaagcca aatcttaaca
      961 aacaatttta gcaaagaaga tagactgcac ttttacatgt ctgaaccaaa ttatgcagga
     1021 aatatcatag taaacttagc aaatcttcca gaattcttac gaaaacctat cttacagaaa
     1081 agattgactg aatttttttc catgtctcag gaagatagaa gagagatcat aaacaatgcc
     1141 ttacaggctg gtcctacaat tcaattcgac aagttttcaa ctctattcaa gacatggctt
     1201 gagattctct gcaatttctc agaagagcaa agaacaatta tgtttacgac atacctaaat
     1261 gaaattgtaa atagtcctca aaagataata tcatttaatc tagatggtat ttttgagatt
     1321 tacttatcat taactcaaga tcaacagaac ttaatatcag ctaccttaaa aaaaatcatc
     1381 aattcacttc ctaacgattt taaaaaaaga ctttacctta taattcctga aagagctaga
     1441 aagaaaatag acgtctaggc tggtttgtct ggttttctct gattttcatc agcaaaattg
     1501 atgacatccc cttcaggcgt cataactccc acgaatacct tttcatatct ttttaacact
     1561 tttctatgtt caggcattga catatccaat ctcatttcat tcataaccat aaccctatat
     1621 tgcttccact ctgcccagca ttcattacaa cagggataat tgcctgctat aggatcgagc
     1681 tcaacagctt ctggtatctc ctttttgcat ttagtacagt tttttgccat aaaaggacac
     1741 catagtgtag caatttattt cttaagaaga gatattagtg aaattggaga aataagtata
     1801 tgaaggtaaa atgccccaaa tgtaatgaaa tagcggaatt gggtgatgat ttttcctatg
     1861 taaagtgttc acattgctcc cttgacatta cgtatgggga atatgtgaaa ttcatagcat
     1921 acaaagatgc aagatatgca gatattttag gagactatac tactgaaacc gagggcacca
     1981 caacaggaac ccttgatgat gattggtaga aaaaaatcta ctacaagact taattaattt
     2041 caaactggtt agtggcatag ttgcaattta tacttgaaac tgctcttaac ttgttgggat
     2101 ttgtagttgg acttgcatta ggaatttttg catatattgg gtttaagaat acaggaagtc
     2161 cgacactttt tagattaaac atctcttttt tttccattgg cataggattt ggagttgttg
     2221 ggtttggata tttgatagaa tcgggcatac taagctatgc tcaaatcgat tcttggattc
     2281 aaacgcttgg gataggaatt cagactgtag gttacttttt cattgcattt tctcatggca
     2341 tcaagtcatt tttccctaaa tcaagatatt tcaagtcaat tgtactccct cttttcatta
     2401 ttcctggcaa ttcaattgag catattataa ggtcaatttc ttttatccta ttggtatatg
     2461 ggacaataga gacaataatg tcatatatgg aaaataggaa gcgcagtacc atttttgttg
     2521 ctgcaggatt gggattactt gccttgggcg aatttctagg atggtattca attgtattcc
     2581 ctaaatcagt gttatacttt gtctcagttt ctacaaaagt agcagggcta ggagccttgt
     2641 tcattccaat ctcacaagtt ccactaagag gtgtaaaatt tggcagcggt gtatagaact
     2701 cacatgagta tcattggcga tattcttgct accactagag atgagattcc tgatgaatca
     2761 ggagcaagtg taacatacct catacgaaga gcaaacgtct catatggcag actctcaaaa
     2821 attctagata cacttgtaca acaaggactt cttgaacaga cctcatcgga aagagcttgt
     2881 aaatacaaaa ttagtgagag aggacgagaa tttttacaag cctatagagg ttttagagaa
     2941 tttgctgatt cgtttggttt aagaatttaa ctacgtttca ttctcaattt cgtcgtcttc
     3001 ttctacatca tcatcttcga actcatcctc aaaatcattc tccaactcgt cagacatcaa
     3061 aattcagagt aaggattttc ctataaaaga gttacacgga tatcaattct gactattact
     3121 aaattatgca gctgggccta cccatccgcc acaagaaaca cacatggtca ttccatcatc
     3181 gtttacatat gtttctccgc caggcgggca ttcacatctt gat
//
LOCUS       DASPUS010000128         2711 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_898798, whole genome shotgun sequence.
ACCESSION   DASPUS010000128 DASPUS010000000
VERSION     DASPUS010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2711)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2711
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_898798"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            113..262
                     /locus_tag="VEJ68_02860"
     CDS             113..262
                     /locus_tag="VEJ68_02860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05742.1"
                     /translation="MTCELGIKRPSVWRKEVRAPFKKVIAFDLLFMMLGGMIGAGIIT
                     AVLLR"
     gene            complement(292..1065)
                     /locus_tag="VEJ68_02865"
     CDS             complement(292..1065)
                     /locus_tag="VEJ68_02865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012876180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HXX05743.1"
                     /translation="MNPKRFANCTITVAEIEVRKIRHDSSELWTRVIQPALWILVFGE
                     VFNGIRGFAPTGVPYLEFITPGILAQSVQFIAIFYGITIVWEKDAGLLTKLLSTPSPR
                     SSIILGKTLAAGFRGIFQALMIFGLAILLGVNLRLGPLEIAGTFFVIVLFAMCFTSLS
                     MSLASFLKTRERMMGIGQAITMPLFFASNAIYPIALMPKWLQIISLGNPLTYVVDALR
                     SMLVTGNYVHLGIDLLALIISTAVMIILATLGLKRLVDS"
     gene            complement(1062..2069)
                     /locus_tag="VEJ68_02870"
     CDS             complement(1062..2069)
                     /locus_tag="VEJ68_02870"
                     /inference="COORDINATES: protein motif:HMM:TIGR01188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HXX05744.1"
                     /translation="MDAIKTQNLTKIFNKRTRAVDDISFAVQEGEIFGLLGPNGAGKT
                     TTIRMITGLTTPTTGFISVFGSDASKSSDEVRQMIGYVPQSISVDADLTAYENLLIFA
                     KLFDINKNERDKRIRFALDYMGLSDRTNDLVKYFSGGMMRRLEVAQALVNQPKMLILD
                     EPSIGLDPSSKMQMWKYLRQLNEDFGTTILITTHDMSEADDLCDRIAIMSSGKIAVIG
                     SPAELKESVGRETLTITLAKPEKISDQRIPALPEELGILISRDLEVVNILTRNGERAI
                     PRILEHFKDAGLNVESVSLNKITLDDVFMKYAKTRFEAENTESNRSARLVRRTFRRRA
                     G"
BASE COUNT          802 a          540 c          470 g          899 t
ORIGIN      
        1 tttctataca gtatatctca actccatcat ttatccatga tttagtaata tagcttagaa
       61 tttgcagaac aagctaacta gagtgtatca acaatgaatg tgtactttac acatgacttg
      121 tgaacttgga ataaaaaggc catcggtctg gagaaaagaa gttcgtgctc ctttcaaaaa
      181 agttattgcc tttgatcttc tttttatgat gcttggaggc atgataggag caggaattat
      241 cacagcagtc ctacttaggt aggactgttt attttttaat tttacatctt tttatgaatc
      301 aaccaagcgc ttcagtccca gtgtagcaag tataatcatt acagcagtgg agattatcaa
      361 tgcaaggaga tcaattccca agtgcacata gttaccagta acaagcatag agcgcagtgc
      421 atcgactaca tatgtgagtg gatttcctaa tgatattatc tgcaaccatt ttggcattag
      481 tgcaattgga tagatagcat tacttgcaaa gaacaatggc attgtaatgg cctgtcctat
      541 tcccatcatt ctttcacgag tcttcaaaaa tgaggcaagc gacatggaaa gactagtaaa
      601 acacattgca aacaagacaa taacaaagaa tgttccagca atttccagag gaccaagcct
      661 tagatttaca cctagtagta tagctaaacc aaatatcatc aatgcttgaa aaattccacg
      721 aaatcctgca gcaagtgttt tgccaagtat tatcgaggat cttggagatg gggttgatag
      781 caattttgtc aaaagcccgg catctttttc ccagactatg gtaatgccat aaaatattgc
      841 gataaactgt acagattgtg caagtattcc aggcgttata aactcaagat atggaactcc
      901 agttggtgca aaacctctga ttccattgaa tacttcacca aagaccaata tccacagtgc
      961 aggttggata actcgtgtcc acaattcaga cgagtcatgt cgtatcttgc gtacctctat
     1021 ctcagcaacg gtaatggtgc agttggcaaa cctttttgga ttcatccagc acgtctccta
     1081 aacgttcttc gcactaggcg cgcgcttcta ttagattcgg tattttctgc ttcaaaccta
     1141 gtctttgcat atttcataaa cacatcatct aaagtgattt tatttagcga tacagactct
     1201 acatttaacc cagcatcctt gaaatgctcc agaattcttg gaattgctct ttcgccattt
     1261 cttgttagta tgtttacaac ttccaaatct ctagagatta gaatgcccag ttcctcaggt
     1321 agtgcaggga ttctttgatc agatattttt tctggttttg ccagtgttat ggttagtgtc
     1381 tcccgtccta ctgattcttt tagttctgca ggagatccta ttacagcaat ctttccagaa
     1441 ctcattattg ctatacgatc acaaagatcg tctgcttctg acatgtcgtg tgttgtgatg
     1501 agtattgtgg ttccaaaatc ttcattgagt tgtcttagat atttccacat ctgcatcttc
     1561 gaggaaggat caagccctat acttggttca tcaagtatga gcatctttgg ttgatttaca
     1621 agtgcttgtg ctacctctag tcttctcatc atccctccag agaaatactt gacaagatcg
     1681 tttgttctgt ccgacaatcc catgtaatct agagcaaatc taattcgttt gtctctttca
     1741 tttttgttta tatcaaagag ttttgcaaat attaagagat tctcgtatgc cgtaagatct
     1801 gcatcaactg agattgactg tggaacatag cctatcatct gccttacttc atcagatgat
     1861 tttgatgcat ctgatccaaa tacactgatg aatccagttg ttggcgtggt aagaccagta
     1921 atcatcctta tggtagttgt ttttcctgca ccattaggac caagtaaacc aaaaatttct
     1981 ccttcttgta cagcaaaact aatgtcatct actgctcttg tacgtttgtt aaagatcttt
     2041 gtcaggtttt gtgtttttat cgcatccaat caaccatacc tcctaaattg cataaaaacg
     2101 caaactcgct gatttcagtg ttttcgataa acccgttaac aagcaagtta tcagtggtct
     2161 ttttgtacgt ttaattctat ctaactaatt tttattccta atatgagatt aaagccctta
     2221 atttttggca ggattcaatc atgcaaataa acaatgaaac aaattgcaaa aattgcaaat
     2281 tagcctcatt ctaagcgatc agagtttgtt gagatttgtt aacctattgt gttttgttga
     2341 ctaaagcaat ttgcttaaat ccatacttcc gtttatggaa ttgaaactag ggtccatgcc
     2401 tccgtttacc aaccccggag acaccccagt ttcattttga tataatatca ctacatctta
     2461 tctaaatatt atccttcgtt ttcacatatc aaacagagaa atatgatttt gtatatcgat
     2521 cactatattt ctcatcgatc attcataaca aataaaaaag aaaagaattt gagcaaacta
     2581 aattagtggt aatgtttaca aattacaata cgaaatctgt actactggtt ttggtttttg
     2641 ttgctgcagg aaccttgttt ggcattgcca atgctcaaag ttctacaggt ttgcctgttg
     2701 aaaccgcaat g
//
LOCUS       DASPUS010000129         6222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1712703, whole genome shotgun sequence.
ACCESSION   DASPUS010000129 DASPUS010000000
VERSION     DASPUS010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 6222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6222)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6222
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1712703"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..309
                     /locus_tag="VEJ68_02875"
     CDS             <1..309
                     /locus_tag="VEJ68_02875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="HAF repeat-containing protein"
                     /protein_id="HXX05745.1"
                     /translation="PVANAGPDKTVEHNDVVTLDGTASTGDNLQYSWQQTSGDSVKLI
                     AENTATPKFVAPDVTPGETKTLTFQLTVTNAYGKDSASVTITVENPIGGPTARITVVK
                     "
     gene            628..1923
                     /locus_tag="VEJ68_02880"
     CDS             628..1923
                     /locus_tag="VEJ68_02880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05746.1"
                     /translation="MSERHISINKRAIFTTGILFIAVVALFVGITSFNDKAYAQTASA
                     NNFAVVNEQTEVTLSGTNSFTPVPGNTITYYWQQMSGDQVSFTNNGPTITFTTPPVAA
                     GETKSLRFALIVTDNHGASSSTAFTLQVVHVNHPPTVVTQHELVVPEGSQVTLSGTAT
                     DPDNDPLKYQWTQTSGDIVTLATPDQPTATFTAPSVGSSPSKTLEFMLTADDGNGGQG
                     SDVETVTVMSNSYYNSPSIDCGGIIGGARGTTVGLQAYVNNPANIQLTYSWTQVSGLP
                     VKLSSADSLNPTFTVPNGPDSSELAFELTVSNGQTQIGTCESYVYTQLGFAMPPVANA
                     GPDRTVNGLDTVTLDGTKSTGVGSLTYSWKQISGVPVQLLYAGTANPQFIAPDVPVGS
                     TDVLVFSLEVSNGLGKSADQVEITVIHPNLPPTAIITLQ"
     gene            2065..3453
                     /locus_tag="VEJ68_02885"
     CDS             2065..3453
                     /locus_tag="VEJ68_02885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HXX05747.1"
                     /translation="MTIKSINPATEEVLAEYENITKDELLEKVKGAKNRFLDWKKDIK
                     RRTDFLHIFSDVLRKNKQQLAMIATKEMGKAIKESLSEVEKCAWVMEFYADNGSVFLH
                     DEVVNTDARKSFISFEPIGVIGSIMPWNFPYWQALRFAAPSLMAGNTIVLKPASVTMR
                     CGIEIENMFKKAGLPDGVFQTIVGNSALAEQLIDSEINAVTFTGSNTVGSIVAQRATS
                     QIKKCVLELGGSDPFIVCSDADIEKASTGAVKGRFINCGQSCIASKRFFVTKNVAKEF
                     IEKFVQKTEKLKVGDPTSEDTDIGPLVNEDGFKKTEELVQDAVNNGAEILSGGKRLHA
                     KGYFYAPTLLGKVTSKMRVAQEEAFCPVAPITVVENEIEAIRLANQSQFGLGASIWTL
                     DLDKADKLSRLIESGIVTVNNVVISDPRIPFGGVKQSGFGRELSRYGMLEFVNIKSVR
                     FYDQLVINHHVE"
     gene            3553..4107
                     /locus_tag="VEJ68_02890"
     CDS             3553..4107
                     /locus_tag="VEJ68_02890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05748.1"
                     /translation="MEQDVTYDKNKTVTFRIDTHVLDKIKSHAAFEKITLNALVNQLL
                     AHAVDWDIVAAKSGWVPIPKTLLMAWFDNLDDQTIVNVAREMGKNVSKDLLFAMRGKN
                     EVWEWVSVLRGRAKAAGFSFTQVDDANEVKFIMKHDMGLKWSKHFMTFYEEAFKEMGC
                     NVKFDFTDNTLIYKIDKKYMTHEK"
     gene            complement(4143..4682)
                     /locus_tag="VEJ68_02895"
     CDS             complement(4143..4682)
                     /locus_tag="VEJ68_02895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05749.1"
                     /translation="MKKNETRSDFLETLKSSYTRRIQEADNFSKHFSENSSRVRSEFL
                     TEILEISQHYIDLQKKFMSKYPKWYDDNLMIKNSQIITDLFTQAIHNMDSSYSEFVDY
                     VLKNLRDVNRIGMQIMQASERYYDMFEYVPQLQRDTFIELIKEAKQHNDDYVHENLKK
                     TSQNQKPRPKKEPLVKDAV"
     gene            4799..5965
                     /locus_tag="VEJ68_02900"
     CDS             4799..5965
                     /locus_tag="VEJ68_02900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008298854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HXX05750.1"
                     /translation="MAIDKTAKQSIALHKRLKGKIIVTGKIKKLRRSEIQLIYTPGVA
                     AVSEEIYHHPRKKYDLTSKGNNVAIVTDGTRILGLGNIGPYAALPVMEGKAVLYREFG
                     NISAFPMCLNVTKKDEIISVIKAIEPAFGAINLEDIESPKVLEISEELENSLSIPVFH
                     DDRHGTSVVALAALLNSLKLVKKQLGSIKVVVAGPGSAGYGITKLLVAAGCKNIIVTD
                     SNGAIYSGRMTNMNKYKIELGKITNLKKEKGSLIDVLKKADVFIGVSGIKNLVTREMV
                     EEMNKDSIIFALTNPDPEILPGVAKAGGAKIVATGSYLYPNKVNNALVFPHIMRIILD
                     KKIRKITVNLLIETAKAIAKTVPTRKLHYDNIIPDMYDQRIQENITHSLYKVRN"
     gene            6012..6164
                     /locus_tag="VEJ68_02905"
     CDS             6012..6164
                     /locus_tag="VEJ68_02905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05751.1"
                     /translation="MVEFTKDCPVCQKQFASLIEYMQHLAKDHKDISPDKILTMNKEE
                     KWKFSK"
BASE COUNT         2153 a         1056 c         1180 g         1833 t
ORIGIN      
        1 cctgtggcaa atgctggccc cgacaagact gtagaacaca atgacgtggt cacattagat
       61 ggaactgcaa gtactggtga taatctacaa tattcatggc aacagactag tggtgacagt
      121 gtaaaattaa ttgcagagaa tacagcaaca ccaaaatttg tcgcacctga tgttactcca
      181 ggtgagacta agaccttgac attccaactc acagtcacca atgcatatgg caaggatagt
      241 gcttcagtta ctatcacagt agaaaatcca ataggcggcc cgactgctag aataacagta
      301 gtaaagtaag aaaccagggt caatttttca ataattcaac aaatacaaaa cgcaatcaat
      361 cttgtgaatt ggaacaatct ataggaatta ctttccacat tttcctgaag gcaaaaattg
      421 taatcttgca gagatttatc aaaagctttg acggagtaaa agacgaaaat ttctagagac
      481 gaatttattc ctaagatcgc ttatggcaag tcttccaccg atcttttcat ccactgaaaa
      541 taatattgtt gcaaaaattt gatccatgac aattaagata atagctgaaa agcttataac
      601 ccccttcgag tgcattcata aacacgcatg tcagagagac atatcagtat aaacaaacgt
      661 gcaattttta caacagggat tctatttatc gcagtagtag cattatttgt tggcattacc
      721 tcatttaatg ataaagcata tgctcagaca gcatctgcaa ataattttgc cgtagtaaat
      781 gaacaaactg aagttacact ttcaggtacc aattcattta caccggttcc tggaaatact
      841 atcacatatt actggcaaca aatgtctgga gaccaagtca gctttacaaa taacggtcca
      901 accataacct ttacaacccc accagttgct gctggagaaa ccaaatctct aagatttgct
      961 cttatagtta cagataatca cggtgcatct agtagcactg catttactct tcaagttgta
     1021 catgttaatc atccacctac agttgtaacc caacacgaac ttgtagttcc tgaaggatca
     1081 caagtcactc taagtggtac tgccactgat cctgataatg atcctctgaa atatcagtgg
     1141 acacaaactt ctggtgatat cgtaacactt gctacaccag atcaacccac cgccacattt
     1201 actgcaccat cagttggctc atctccatct aagactttag agttcatgct aacagcagat
     1261 gatggtaatg gtggacaagg ttctgatgtt gaaacggtaa cagtcatgag taacagctat
     1321 tacaactccc catcaattga ttgtggaggt attatcggag gagcaagagg aaccactgta
     1381 ggtctccaag cctatgtaaa taatcctgct aacatacagc taacttattc atggacacaa
     1441 gtatctggtt tgccagtgaa attgtcctct gcagattcat tgaatccaac atttacagta
     1501 ccaaacggtc ctgactcttc tgaacttgca ttcgaattaa cagtatcaaa cggtcaaacc
     1561 caaattggaa cctgtgagag ctatgtatac actcaattag gatttgccat gccacctgtt
     1621 gctaacgctg gtcctgatag gactgtaaat ggattagata cagtaacact tgatggtaca
     1681 aagagtaccg gtgttggttc attaacatac tcttggaaac aaatctctgg agttccagta
     1741 cagttactat atgctggaac agccaatcct caatttattg ctcctgatgt tccagtaggt
     1801 agcactgacg tgctcgtatt ctccttagaa gtaagcaatg gactaggtaa aagcgctgat
     1861 caggtagaaa tcacagtcat tcatccaaac ctgccaccaa ccgcaataat cacattgcag
     1921 tagaataact aaccatgcat gtccagtttt actggatgtt gttcaaattt tatttggtat
     1981 gatatcattg aacgtgtaga aattattacc tgttttctgg gaaataacac tatgatgata
     2041 taatactaaa gagaaatact agatgtgaca ataaaatcaa tcaatcctgc cacggaggaa
     2101 gttttagctg aatacgagaa cattacaaag gatgaactac tggaaaaagt taagggcgca
     2161 aaaaacaggt ttttagattg gaaaaaggat atcaagagaa ggactgattt tcttcacata
     2221 ttttctgatg tattaaggaa aaacaaacag caattggcaa tgattgcaac aaaagagatg
     2281 gggaaagcta tcaaagaatc attatccgaa gtagaaaaat gtgcttgggt aatggagttc
     2341 tatgcagaca acggttctgt ctttttacac gatgaggtcg taaacactga tgcaagaaaa
     2401 agtttcattt cgtttgaacc cattggagtt attggaagta taatgccatg gaattttcca
     2461 tattggcagg cattacgatt tgcagctccc tcactaatgg caggaaacac aattgtcttg
     2521 aaacctgcca gtgtaacaat gagatgtggt attgaaatag aaaacatgtt caagaaagct
     2581 ggtcttcctg atggtgtttt tcaaacaatt gtaggaaatt ctgcacttgc tgaacagttg
     2641 atagattctg aaatcaatgc agtaacattt accggtagca ataccgttgg ctcaatagta
     2701 gctcaaagag caacatcaca aataaaaaaa tgtgttcttg agcttggagg aagtgatcca
     2761 tttattgtct gttctgacgc agacattgag aaggcgtcta cgggtgcagt caaagggcgt
     2821 tttattaatt gtggtcagag ttgcattgca tcaaaaagat tctttgtgac aaaaaacgtt
     2881 gctaaggaat ttattgaaaa atttgtccaa aagactgaaa agttgaaagt aggagaccct
     2941 acttctgaag atacggatat aggtccactt gtaaatgaag atggatttaa gaaaaccgaa
     3001 gagcttgttc aggatgcagt aaacaatggt gccgagatac tatctggagg aaaaagatta
     3061 catgctaaag gctattttta tgctcctacc cttcttggca aggtaacgtc caagatgcga
     3121 gttgcacaag aagaagcatt ttgtccggtg gcaccaatta ctgtggttga aaatgaaatt
     3181 gaagctattc ggcttgcaaa tcaatctcaa tttggtctag gagcaagcat atggacacta
     3241 gatcttgata aggcagataa actttcgagg ttaatagaat caggaattgt aacagtaaat
     3301 aatgttgtaa tatctgatcc aagaattcca ttcggtggag taaaacaaag cggttttggg
     3361 agagaacttt caagatatgg tatgctggaa tttgttaaca taaaatcagt ccgattctat
     3421 gatcagttgg ttattaatca tcatgtagaa tagatattgt aatagaattg aaaaattcag
     3481 ttgtttcact ttgttttgta cgataacaat gttacataat cttaatttgt ttgaataatt
     3541 aataggcata taatggagca agatgttacc tatgacaaga ataaaacagt aacatttagg
     3601 atagatacac atgttttaga taagataaaa tctcatgctg catttgaaaa aattacatta
     3661 aatgcactgg tcaatcaact tcttgcacat gccgttgatt gggacattgt tgcagcaaaa
     3721 tcaggatggg ttccaatacc aaagaccctc ttgatggctt ggtttgacaa tttagatgat
     3781 cagactattg tgaatgttgc aagagagatg ggaaaaaatg tttcaaaaga cttgctcttt
     3841 gcaatgagag gaaaaaacga ggtctgggaa tgggtttctg ttttacgagg aagggcaaaa
     3901 gcggcaggtt ttagttttac acaagtggat gatgcaaacg aagtaaaatt cattatgaaa
     3961 catgatatgg gattaaagtg gtccaaacat tttatgacat tttacgagga ggcatttaag
     4021 gaaatgggat gtaatgtaaa atttgatttt actgataata ctcttatcta taaaattgat
     4081 aaaaaataca tgacacacga aaaataaatc agtctgatat aattcggcgc taaaatgaac
     4141 ttttagactg cgtcctttac aaggggttct ttcttgggtc ttggtttttg attttgtgat
     4201 gtttttttaa gattttcatg tacataatcg tcattatgct gttttgcttc tttgattaat
     4261 tctataaaag tatccctttg aagttgcgga acatattcaa acatgtcata atatcgctca
     4321 gatgcctgca ttatctgcat tccaattcta tttacatctc tcaagttctt taacacataa
     4381 tcaacaaatt cagaatacga ggaatccatg ttatgtattg cttgagtaaa aagatctgtt
     4441 attatttgag aattttttat catcaagttg tcatcatacc attttggata tttagacatg
     4501 aatttttttt gcagatcaat ataatgttga gaaatctcaa gaatttcagt aagaaactcg
     4561 ctcctaacac gtgatgaatt ctctgaaaaa tgctttgaaa agttatctgc ttcttgaatt
     4621 ctacgtgtat aacttgattt gagggtctct aaaaaatcag atctagtttc attttttttc
     4681 aagttcccac ttgctatcta taaaacgtta atctaataga taagattgtt gtcaattctc
     4741 acatcgatct gaatgtgacc gttaaaaaac ttagaaagct caaagtaaat gctatattgt
     4801 ggctatagac aaaaccgcca agcaatcaat tgcactacac aaaagactca aaggcaaaat
     4861 tatagttaca ggtaaaatta agaaactcag aagaagcgaa atccagttaa tttacacgcc
     4921 aggtgtggca gcagtaagcg aagagatcta tcaccaccct agaaaaaaat atgatctgac
     4981 ctcgaaaggc aataatgtgg caatagtaac tgatggtaca agaattctgg gactgggaaa
     5041 tatcggtcct tatgcagctc ttcctgtaat ggaaggaaag gctgttttgt acagggagtt
     5101 tggaaatatc agtgcctttc ctatgtgtct gaatgttaca aaaaaggatg aaataatttc
     5161 tgtcattaaa gcaattgaac cagcatttgg tgccataaat cttgaagaca ttgaatctcc
     5221 aaaagttttg gaaatttctg aagaacttga aaactctctt tcaatacctg tttttcatga
     5281 tgatagacac gggacttcag ttgtagcact tgcagctctg ttaaactctc ttaaacttgt
     5341 aaaaaaacaa ttaggttcaa tcaaagtagt tgtcgctggt ccaggttctg ctggttatgg
     5401 aataacaaaa ttacttgttg cagctggttg caaaaacata attgttacag attccaacgg
     5461 ggcaatttac agtggaagaa tgacaaacat gaataaatat aaaattgaac taggtaaaat
     5521 cacaaacctg aaaaaagaaa aaggatctct tatcgacgta ctcaaaaaag cagatgtctt
     5581 cataggtgta tcagggataa agaatctggt aactcgtgaa atggtagaag aaatgaacaa
     5641 agattctata atttttgccc tgacaaatcc tgacccagaa atactgccag gggttgcaaa
     5701 agctggtggt gcaaaaattg ttgccactgg aagttatctt tatccaaata aggttaacaa
     5761 cgcactagtt tttccacata ttatgagaat aatactggat aagaaaatac gcaagataac
     5821 tgtaaacttg ttaattgaaa ctgcaaaagc aattgcaaaa accgtcccaa caagaaaatt
     5881 acattatgat aacattatac ctgatatgta tgaccaacga atacaagaaa acataacgca
     5941 ttcattgtat aaagtacgta attgaaaatc ttaaataagt taaaatagaa aatttgtatt
     6001 ttattatatt gatggtagaa tttacgaaag attgtcctgt ttgccagaaa caatttgcaa
     6061 gtcttattga atatatgcaa cacttggcaa aagatcataa agacatttca cctgataaaa
     6121 tattgactat gaataaagaa gaaaaatgga agttttcaaa gtaggtttgg taatattcaa
     6181 cattaatgtt ttattttctg cagaaattgt tctataggat at
//
LOCUS       DASPUS010000130         2070 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_901291, whole genome shotgun sequence.
ACCESSION   DASPUS010000130 DASPUS010000000
VERSION     DASPUS010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2070)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2070
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_901291"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(87..251)
                     /locus_tag="VEJ68_02910"
     CDS             complement(87..251)
                     /locus_tag="VEJ68_02910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05752.1"
                     /translation="MIAQATVGLVKQPTIHSFWICYRCNITLRDEPSVSLHEEITKHS
                     ARKIEFNQKG"
     gene            743..1483
                     /locus_tag="VEJ68_02915"
     CDS             743..1483
                     /locus_tag="VEJ68_02915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018130806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HXX05753.1"
                     /translation="MIRVIKEQEQYKGKNDWLTTYHHFSFAEYYDPSKVNYGPLRVFN
                     DDVIQPGTGFDFHQHQDMEIVTYVIDGILEHKDSLGNHGIIQPGEIQRMSAGTGVFHS
                     EFNHSNEKPLRLLQIWLFSDTRGLRPSWEQRKYTKNDRKNKLLPVISPNSNQKDRLAI
                     NQDATFYISDIETGKELSYITKSNRITYLFVIEGKISLNGKVLYTRDIAQIENEEILK
                     IKAQRDTELILIDLPIKFVKNSEPVKII"
     gene            1732..>2070
                     /locus_tag="VEJ68_02920"
     CDS             1732..>2070
                     /locus_tag="VEJ68_02920"
                     /inference="COORDINATES: protein motif:HMM:NF014573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HXX05754.1"
                     /translation="MDRMTDQLKSADVVVVAYPMNNFSMPAPVKAWFDSVMLKGQTWY
                     AKDGSYIGLMNGKKALAIVTSGGIYEKEPMASWEHALSLTKIEFQFMGYSDVRGILAG
                     GMNAGEDVKTS"
BASE COUNT          700 a          370 c          415 g          585 t
ORIGIN      
        1 agcaggtaaa tttctatcag aacttgccac gatattatga aaatggccta ttgtaaaaag
       61 ttctcgtata ttaaaaaatg aaagaattat cctttctggt taaattcaat ttttcgtgcg
      121 gaatgctttg ttatctcctc atgcaatgat actgatggtt catcacggag tgtaatgtta
      181 cacctgtagc atatccaaaa agagtggatt gttggctgtt ttaccagccc aacagttgct
      241 tgtgcaatca tctaatgtcc cctaacaggc atcactggta gtggatttcc agacgattcc
      301 cctgcagttc atcggtggtc tccgcaaata aggccatgat cccataaagc tatttcatgc
      361 gaatgcgagt acatgccgtt ttggtcatca gcgaaggcaa accctgaaaa ggtagagctc
      421 agacccattg catatactgc tattgagaga atcaatttct tgtagcttgt catccctagc
      481 cgaatgtcct cccacagatc tcacattccc aatgcgactt tatgaccgtc cacttgtgct
      541 catgatgtgg ttctgatgtt gcattcgttc ttggaatttg gtttattgtt tccatctttc
      601 cttattggaa gaacgttgtg atatattcaa gtaaatacag ttcttgagat gtgaacaaat
      661 ctgtgtactg taaacaactc tctttaaaat tcaagtattt catttagggt acattaagta
      721 gatttccaac tatactgatt acatgattcg agtaatcaaa gaacaagaac aatacaaagg
      781 caaaaacgac tggttaacaa cataccacca cttttcgttt gctgaatact atgatccaag
      841 taaggtaaac tatggaccat tacgagtctt caatgatgat gtcatacagc ctggaacagg
      901 ctttgatttt catcaacatc aagacatgga gatagtaacc tatgtaattg acgggatact
      961 tgagcacaag gatagtcttg gaaatcatgg aataatccag ccaggagaga tacagagaat
     1021 gtcggctgga actggcgtgt tccactcgga gttcaaccac tcaaatgaaa agccattacg
     1081 acttttgcaa atttggctct ttagtgacac taggggattg agaccatcgt gggagcagag
     1141 gaaatacaca aaaaatgaca gaaaaaacaa gctattaccc gtaataagtc cgaactctaa
     1201 tcagaaagac agacttgcaa taaatcagga tgcaacattt tacatttcag atatagaaac
     1261 aggtaaggag ctaagttata tcacaaaaag caatagaatc acatatttgt ttgtcattga
     1321 aggaaaaatt tcattaaatg gaaaagtgct ctatacaagg gatatagcgc agatagaaaa
     1381 tgaagagatc ttaaagatca aagctcaaag agatacagag cttatcttga ttgatctgcc
     1441 gataaagttt gtgaaaaatt cagaaccagt gaagatcata tagaaatgag cccagatgta
     1501 aaaaaaatca ttgaagatac taattgtgca gtatacccca cgaaatgaaa gatctagtgc
     1561 caaaaaaata ttggatgctt tcattgaaga gataaatggt ttagatattg agaaactaga
     1621 tcttgtaaaa gatgtaccgg atttgttttt ggaaaaaaat ttaaccgcat acatacatcg
     1681 caactacttc ggccaagaat tatcctcaac cagaagagtc tattattcaa aatggatcgt
     1741 atgactgacc aactaaaatc agctgatgtg gtagtggttg catatccgat gaacaatttc
     1801 tctatgccag cccctgtcaa agcttggttt gattctgtaa tgctaaaagg acaaacatgg
     1861 tatgccaagg atggaagtta cattggacta atgaatggga aaaaagcact agctatagta
     1921 acatcaggtg gaatttatga aaaggaaccc atggcttcat gggaacacgc attgtcgctt
     1981 acaaagattg aatttcagtt tatgggatac tctgatgttc gtggaatact tgctggtgga
     2041 atgaatgcag gagaagatgt caaaacttcg
//
LOCUS       DASPUS010000131         5710 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_902773, whole genome shotgun sequence.
ACCESSION   DASPUS010000131 DASPUS010000000
VERSION     DASPUS010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5710)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5710
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_902773"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..323
                     /locus_tag="VEJ68_02925"
     CDS             <1..323
                     /locus_tag="VEJ68_02925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007403063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HXX05755.1"
                     /translation="SNNYTRFLVLTFKKQERTSKDKTSIIFSIKHVPGALYEILEKFN
                     TNKINLTKIESRPTKNTPWEYNFYVDFEGHQSDKNIQDTLDKIKNNTIFLKVLGSYPK
                     AELH"
     gene            complement(320..784)
                     /locus_tag="VEJ68_02930"
     CDS             complement(320..784)
                     /locus_tag="VEJ68_02930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05756.1"
                     /translation="MLTKRTLIGMGIGGLAVVLGSFFLIQSLISNIHEVNEPVDIGKS
                     DVFQFDVQKHYHELLNVTGSSFHVKLTTPSNGLQVDDNFQNQVSFDYVILENGKNFIN
                     ITNTGGSALHVIGKLSAVQNPLVFTTHLIVITSGILIIGISAAFSVRKPRGF"
     gene            complement(821..2260)
                     /gene="guaB"
                     /locus_tag="VEJ68_02935"
     CDS             complement(821..2260)
                     /gene="guaB"
                     /locus_tag="VEJ68_02935"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HXX05757.1"
                     /translation="MEIREGLTFDDVLLVPKRSNIVTRSQTNLQTKLSRNISLNIPII
                     SANMDTVTESAMAVAMAREGGIGIIHRFLTISEQVTEVLKAKRSGSIIIENPYTIGPD
                     QTLREAIGYMREKGVSGLLVTDPQGKLAGILTRRDIVMLEPGDEKKQVKEVMTSDVIT
                     AKSGVSTDEAKDLLRKNCIEKLPLLDERGHVKGLVTSKDILNVGNYPHASKDKKGRPL
                     VGAAVGVKGDFMERTEALLEAGADVIVVDIAHGHSENALNTVRLIKKAFPNSELIAGN
                     VATAHGTEDLIKAGVDAVKVGVGSGSICITRVITGSGVPQLTAVVDCAEVGKKYDIPI
                     ISDGGIRNSGDATKALAAGSSTVMVGSLLGGTDESPGSYVMKNGKRYKIYRGMASFYA
                     SLGRKTKETGSLDISEDLNDYVAEGVEAMVPYKGSVTDIIKQLTGGIRSGLSYCGANN
                     IKQMQQNAEFIKMSTAGYAESQPHDVELM"
     gene            complement(2291..3157)
                     /gene="folP"
                     /locus_tag="VEJ68_02940"
     CDS             complement(2291..3157)
                     /gene="folP"
                     /locus_tag="VEJ68_02940"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HXX05758.1"
                     /translation="MNKLGQVSVGNSNPVRIMGIINTSPESFYKKSVFTDKKEIAKTA
                     KQMEEEGADFIDVGGMSTAPYLNTMISEEKEIERITKAIEAIQKVSCLPISIDTCRAN
                     VARSAFEYGVDILNDISGLKYDKKMLSVLKKYNPSVIICAFSGKIVKGNQVVQTKNLL
                     YQSLVLAKKADVSRNKIVVDPAIGFFRKQAKGIFFTKINSDWLARDVLIIQNLRSIKL
                     GQPLLISVSRKSFIGSLLNEKDPSKRLYGSLAAEIISVMNGADIIRTHNVKATHDAIE
                     IAQKLVRSKKGL"
     gene            3194..3934
                     /locus_tag="VEJ68_02945"
     CDS             3194..3934
                     /locus_tag="VEJ68_02945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-hydroxymethylpterin diphosphokinase MptE-like
                     protein"
                     /protein_id="HXX05759.1"
                     /translation="MKVLGWEEKYKEILKEFNYSRKKDFQAAKFLNSILKTSFPIKKL
                     EQKIKGKTVFVIGAGPSLALSIGHIKKFSNVTKIVADGATTALLKSRIAPDIVVTDLD
                     GNIEFLKKASDMNSVMIVHAHGDNIVKLPMVLYFKNCLGTTEGKPFDKIRNFGGFTDG
                     DRCVFLAKYFGAKKIILFGMDFGSKVGSYSKEGKFNRHTKLKKLRKAKMLVEWIASRG
                     NSKLYTASKPFKGVHKIRFSDLKELVRT"
     gene            3978..4532
                     /locus_tag="VEJ68_02950"
     CDS             3978..4532
                     /locus_tag="VEJ68_02950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05760.1"
                     /translation="MSYYPEDEIRDVLELREWLLEEVEKREKDIEKLKQNLRILDSLV
                     KQSSFSKASTLMSTGKNQPVQQTANIIPMKTQENQIIANAHVTPDELVIIPSEEITLD
                     VDTQPFKSFFLGRIIGGMETQDNTEVQNGKISQNSTINCIVNKDGNKIREILIKNYRQ
                     KERVNEIINTATWSFSRMIENSRK"
     gene            4537..>5710
                     /gene="guaA"
                     /locus_tag="VEJ68_02955"
     CDS             4537..>5710
                     /gene="guaA"
                     /locus_tag="VEJ68_02955"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HXX05761.1"
                     /translation="MDKIVVLDFGSQYSHLICRRIREFSVYAELVPYDISLEELKKIN
                     PKGIIFSGGPASVYNKDSPLPKIGIFDIGLPVLGICYGHQLIVNNFGGKVKRANKEYG
                     SSLLDIDGDSDLLAGIGKSTRAWMSHGDAAESLPNGFEIIGHTQNSFAAAIANKQKLI
                     YGIQFHPEVVHTEKGIQVLRNFVLNICKAKQDWTLENFIESTVSDISKIDGNVLCGIS
                     GGIDSTVAALLIQKAIGKRLKCVFIDNGLLRLDEEKEVDDMFKNNFGMNFTVIDAKAR
                     FLSRLEGVSDPEKKRKIVGEEFVKIFMEFAEKNGPFKWLAQGTLYPDVIESGVSKGPA
                     AVIKTHHNVGGLPSWLNLQVLEPLRFLYKDEVRKAGKLLGVPDKLLMRHPFPGPGLA"
BASE COUNT         1836 a         1034 c         1019 g         1821 t
ORIGIN      
        1 attcgaacaa ttacaccaga tttttagttc ttacctttaa aaaacaggaa agaacctcaa
       61 aagacaagac gtctattatt ttttctataa aacatgtacc aggtgcacta tatgaaattc
      121 ttgaaaagtt caacactaat aagatcaact tgacaaaaat tgaatccaga ccaacgaaaa
      181 atactccttg ggaatacaat ttctatgttg attttgaagg acatcaaagt gacaaaaata
      241 ttcaggatac tcttgataag ataaaaaata atactatatt tctaaaagtc ttaggttctt
      301 atccaaaagc agagttacac taaaagcctc tgggttttct gactgagaaa gcagcactta
      361 ttccaattat taaaattcct gaggttatca ctatcaaatg agtcgtaaag actaatggat
      421 tttgaacagc acttaatttt ccaatcacgt gtaaagcaga gccaccagtg tttgtgatgt
      481 taatgaaatt ttttccattt tcaagtataa catagtcaaa actaacctga ttttgaaaat
      541 tatcatctac ttgtaagcca tttgatggtg ttgttagttt tacatggaat gaactaccag
      601 taacattgag caattcatga taatgttttt ggacatcgaa ttgaaagaca tcactctttc
      661 caatatcaac aggctcgttt acttcgtgaa tattagatat taaagattga attaaaaaaa
      721 atgatccgag tacaaccgca agcccaccaa tacccattcc aattaaagtt cgtttagtaa
      781 gcatttatga aaactatttc cttgttgtac ttaaagaggt ttacatgagc tcgacgtcat
      841 gaggttgact ttctgcatat cctgctgtcg acatttttat aaattcggca ttttgttgca
      901 tttgtttaat attatttgca ccacagtaac ttagtccaga acgtatacca ccagttaatt
      961 gttttatgat atcagttaca ctgcctttgt aaggaaccat agcttcgaca ccttctgcaa
     1021 catagtcatt gagatcttca ctaatatcaa gtgagcctgt ttctttggtc ttccttccca
     1081 gtgatgcata aaaggaagcc attcctcggt agatcttgta tcttttgccg tttttcataa
     1141 catatgagcc tggactctca tcagtgcctc caagtaggct accaaccatt acagttgatg
     1201 atcctgcagc aagagctttt gttgcatcac cagaattcct tatgcctcca tcagatatta
     1261 ttggaatatc atatttcttg ccaacttctg cacaatctac taccgcagtt aactgtggta
     1321 ctccagatcc agtgatcact ctagttatgc atatagaccc tgaacctacg ccaactttta
     1381 ctgcgtctac tccagctttg atgagatctt ctgtaccatg agctgttgcc acatttcctg
     1441 caattagctc agagtttgga aatgcttttt taatcagccg gacagtattg agggcatttt
     1501 cactatggcc gtgtgctata tcaactacga taacatctgc accagcttca agaagagctt
     1561 ctgttcgttc cataaaatcc ccctttactc ctactgcagc acccaccaat ggtcttccct
     1621 ttttgtcctt agatgcatgt gggtaattgc ccacgttcag tatatcctta cttgttacaa
     1681 gaccctttac atgtcctcgt tcatcaagaa gtggcaattt ttcaatgcag ttctttcgaa
     1741 gcaagtcttt ggcttcatct gtgctaactc cagatttggc agtgattaca tcgcttgtca
     1801 taacttcctt tacttgtttt ttctcatcac ctggttccag catgacaata tctcttcttg
     1861 tcagtatacc tgcaagtttg ccttggggat cagtgacaag aagtcctgat actccttttt
     1921 cacgcatgta tccgatagct tctcgaaggg tttgatctgg tccaatagta tagggatttt
     1981 ctataatgat acttccagag cgttttgcct ttagtacctc tgttacttgt tctgatatag
     2041 taagaaaacg atgtattatt ccgatacctc cttctctagc catagctact gccattgcag
     2101 attcagtaac agtatccatg ttagcactaa taattggaat gttaagagag atatttcttg
     2161 aaagttttgt ctgtagattg gtctgcgatc tggtaactat gttagatcgt ttaggaacaa
     2221 ggagtacatc atcaaacgtt aatccttccc ttatttccaa tgaaaccttc ttgattagaa
     2281 ttaaaatctg ttataagcct ttcttgctac gaactagttt ttgagcaatc tcaattgcat
     2341 catgtgttgc tttgacatta tgtgttctta taatatcagc accattcatg acggatatta
     2401 tttccgcagc taatgatcca tagagtcttt tacttggatc tttttcattt agtaaagatc
     2461 caataaatga ctttcttgaa actgagatga gcaatggttg tccaagttta attgagcgca
     2521 gattttgtat tattaaaaca tctcgcgcca accaatctga attgattttt gtgaaaaaaa
     2581 ttccttttgc ttgttttcga aagaatccaa ttgcaggatc tacaactatt ttatttcttg
     2641 aaacatcagc tttttttgcc aaaacaagac tctgatacaa aagattcttt gtctgaacta
     2701 cttgatttcc tttaacaatt ttaccactaa aggcacaaat tatgactgag ggattgtatt
     2761 tttttagtac acttaacatt tttttgtcat attttagacc cgatatatcg ttgagaatat
     2821 caactccata ttcaaacgct gatcttgcca catttgccct gcatgtatca atagaaatag
     2881 gtaagcaaga gactttttgt attgcctcta ttgcttttgt aatcctctct atttcttttt
     2941 cttctgatat catggtattc agatacggag cagtagacat tcctcccaca tcgataaaat
     3001 cagctccttc ctcttccatt tgttttgctg tttttgcaat ttctttttta tcggtaaata
     3061 cagatttctt ataaaacgat tcgggacttg tgttgattat acccatgatt ctaactggat
     3121 tagaatttcc aacagatact tgtcctagtt tgttcatatg gtttatgatt aacccatata
     3181 catttagatt tacatgaaag tgttaggatg ggaagaaaaa tacaaagaga ttctcaagga
     3241 atttaattac agcagaaaaa aagatttcca agcagccaag tttctcaatt ccattctcaa
     3301 aacttcattt cctattaaaa aactcgagca aaaaattaag ggtaaaactg tatttgttat
     3361 aggagctggc ccttctcttg cattatcaat tggacacatc aagaaattct caaatgtcac
     3421 aaaaattgta gcagatggtg ccactacggc gcttctcaag agtagaattg caccagacat
     3481 agtagtaaca gatttggatg gaaatattga atttctcaaa aaagcttcag atatgaattc
     3541 agtgatgatt gttcatgcgc atggtgacaa tatcgtgaaa cttccaatgg tattatattt
     3601 taaaaattgt cttggaacaa cagaaggaaa accatttgat aaaattagaa attttggtgg
     3661 ctttactgat ggtgacagat gtgtttttct tgcaaagtat tttggagcaa aaaaaataat
     3721 cctttttggc atggattttg gtagcaaagt gggaagttat tcaaaagaag gaaaatttaa
     3781 cagacatact aaactcaaga agctaagaaa ggcaaaaatg ctcgtggagt ggattgcgtc
     3841 aagaggtaat tcaaaattgt acactgcttc aaaaccgttc aagggtgtac ataagataag
     3901 atttagtgat cttaaagaat tagtcagaac ctgatgcttg ttttaatatt tattatccat
     3961 tcaacaataa aacaaacatg agttattatc cagaagatga aattcgggat gttttagagc
     4021 taagagaatg gttattagag gaagttgaaa agcgagaaaa agatattgaa aaattgaaac
     4081 agaatcttcg aattcttgat tctctagtaa aacaatcaag ctttagcaaa gcatcaacct
     4141 taatgtcgac tgggaaaaat caacccgtac aacaaacagc aaatataatt cctatgaaga
     4201 cccaagaaaa tcagatcata gcaaatgctc atgttactcc agatgagctt gtcataatac
     4261 cctccgaaga aattactctt gacgtagata ctcaaccttt caaatccttc tttctaggaa
     4321 gaatcatagg tggtatggaa actcaggata atacggaagt tcaaaacggc aagatctccc
     4381 aaaattcgac aataaactgc attgtaaata aagatggcaa taaaatcaga gaaattctta
     4441 tcaaaaatta tcgtcaaaaa gagagagtaa acgagattat caacactgca acttggtcat
     4501 tttctagaat gatcgaaaat tcaagaaagt gaatttatgg acaagatagt tgtactagat
     4561 tttggttcac aatatagcca cctaatttgc agaaggatac gcgaattttc agtgtatgcc
     4621 gagcttgtac catatgacat atcacttgaa gaactaaaaa aaataaaccc aaaaggaata
     4681 atcttcagtg gtggtccagc aagtgtatat aacaaagatt caccactgcc caagattggg
     4741 atttttgata ttggtttacc agtacttggc atttgctatg gacatcaatt aattgtcaac
     4801 aattttggag gcaaggtcaa acgtgcaaac aaggaatatg gttcatcctt gttagatata
     4861 gatggtgact ctgatctact tgctgggatt ggaaaatcaa ccagggcatg gatgagtcat
     4921 ggggacgcag cagagagttt accaaacggg tttgaaataa taggacacac tcagaattct
     4981 tttgctgctg caatagcaaa caagcagaaa ttaatctatg gcattcagtt tcatccagag
     5041 gtagttcaca ctgagaaagg aattcaagtg cttagaaatt ttgttctcaa catatgcaag
     5101 gcaaaacaag actggacgct tgaaaacttt atagaatcaa ctgtttctga tatttcaaaa
     5161 attgatggta atgtcttgtg tggcattagt ggaggaattg attctaccgt agcagcactc
     5221 ttgatccaaa aagcaattgg taagagacta aaatgcgtct tcattgacaa tggactgctt
     5281 cgactagatg aagaaaaaga ggtagatgat atgttcaaaa acaattttgg aatgaatttt
     5341 acagtaattg atgctaaagc aaggtttctt tcaagactcg agggagtaag tgatcccgaa
     5401 aagaaaagaa agattgtagg cgaggaattt gtcaagatat tcatggaatt tgcggaaaaa
     5461 aatggtccat tcaagtggtt ggcacaggga acgctttatc cagatgtaat tgaaagtggg
     5521 gtatcaaaag gacctgctgc tgtaattaag actcatcata atgttggagg tctgccttca
     5581 tggcttaatt tacaagtttt agaacctctc aggttcttgt ataaagacga agtaaggaag
     5641 gcaggcaagc ttctgggtgt acctgacaag ttattgatgc gacatccgtt tccaggtcca
     5701 ggacttgcag
//
LOCUS       DASPUS010000132         2865 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1845852, whole genome shotgun sequence.
ACCESSION   DASPUS010000132 DASPUS010000000
VERSION     DASPUS010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2865)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2865
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1845852"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..217
                     /locus_tag="VEJ68_02960"
     CDS             32..217
                     /locus_tag="VEJ68_02960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1059 domain-containing protein"
                     /protein_id="HXX05762.1"
                     /translation="MLKFKCKDVGFKCGFTAKGKTEDEILSQCATHATKDHDMKPEDI
                     TDELKNKIKANIHKSWF"
     gene            complement(399..470)
                     /locus_tag="VEJ68_02965"
     tRNA            complement(399..470)
                     /locus_tag="VEJ68_02965"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(435..437),aa:His,seq:gtg)
     gene            complement(539..1591)
                     /locus_tag="VEJ68_02970"
     CDS             complement(539..1591)
                     /locus_tag="VEJ68_02970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase"
                     /protein_id="HXX05763.1"
                     /translation="MKAARIVRIKEPLEIQSMEVPKPRGSQVLIKVESAGVCHSDIHL
                     WDGGYEGVGGQIIKTTDRGVKYPLTPGHEVAGVVESMGEDVEGFTKNEKVLVFPWIGE
                     GLCPACRVGEENLCDKPRSLGVYNDGGYAEYVLVPSYKYLARIGDLDTDTSAPLSCSA
                     LTAYGAVKNAQLRPSDNVVVVGAGGLGLMGIQLAKAVSGARIISLDVNDEKLKVAKQS
                     GADITINSKNEDPVKAIMELTDNLGADAVIDFVNATNTVETDMKLLRRRARVVMVGLF
                     GGALQLNLVSMPTRAYKLIGSYTGSMTDMIELISLARRNIIKPVISNRFKLDQATDAL
                     NMLKQGKIIGRGIINP"
     gene            1944..>2865
                     /gene="twy1"
                     /locus_tag="VEJ68_02975"
     CDS             1944..>2865
                     /gene="twy1"
                     /locus_tag="VEJ68_02975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-demethylwyosine synthase TYW1"
                     /protein_id="HXX05764.1"
                     /translation="MSCSGEVLESSNDFIQIKPMIMNQLKKAKYGVSDHGTVELCHYT
                     KKSFKNEGDCYKHKFYGISTHRCMEFSPAGMFCENRCVYCWRPMEFYSAMKMDPQKIA
                     PPETIMSNLMEERRKLIMGYYGDSRHDEKKLDESLLPSHYAISLSGEPTMYPQLPELI
                     RYLKKLPTTKSVFLVTNGQEPEMLKRLQDEDALPTQLYLSTNAPNKEIFQMVNRPKYE
                     DAWERWNTSLEIISNSDTRSVLRLTLIRGYNCSDELIPEYAKMIRDSGIHFIEAKSYM
                     HIGRSTNRLERSDMLEMSEVKHFANELARQS"
BASE COUNT          899 a          601 c          551 g          814 t
ORIGIN      
        1 ccttataaca ttctgaaaat aaaaaataat catgttaaaa ttcaaatgta aagacgtagg
       61 tttcaagtgt ggttttacag cgaaaggtaa aacagaagat gagattctgt cacaatgtgc
      121 tactcatgca acaaaggacc atgacatgaa acctgaagat ataactgatg agctcaagaa
      181 caagattaag gctaatattc acaaatcttg gttttagact ctagtatttt ctgtccaatc
      241 ttacaagagt tgtaggtaga gaaggaaatc attggatgaa atattgtatc atatggaaca
      301 aataggaaaa tacgaaaaaa ggaacatggt atcaaaatcc tattgctatt agacgacaaa
      361 taaatgaagt cctgatggcc taatacaaat agttcagggg cccttgaggg gaatcgaacc
      421 cctgtccggg gatccacagt cccctatact cgccactgta ctacaagggc cacataaagg
      481 gaaacgattt cgtaccagta ttaatcttaa ctctataaaa tacggttttc agaaaatttt
      541 acgggttgat gattccgcgt ccgattatct tgccctgctt taacatgtta agggcatctg
      601 ttgcctggtc aagcttgaat ctattggata ttacaggttt gatgatgttc cttcttgcaa
      661 gtgatatcaa ttcaatcatg tcagtcatgg aacctgtgta tgagccaatt aacttgtatg
      721 cacgtgttgg catagatacc agattcagct gtagtgcacc accaaacagt ccaaccataa
      781 ccacacgagc cctgcgtcgg agcagtttca tatctgtctc cacagtattg gttgcattaa
      841 caaaatcaat cacggcatca gcacccaagt tgtctgttag ttccattata gctttgaccg
      901 gatcctcgtt tttggagttt atcgtaatat ctgcgccact ttgttttgca acctttaatt
      961 tttcatcatt tacatccaat gaaattattc ttgctccaga tactgcttta gctaactgta
     1021 ttcccataag acccagtccc cctgcaccta ctaccacgac attatcagat ggtcttagtt
     1081 gtgcattctt tactgcacca tatgctgtaa gagcagaaca tgataacggt gcactagtat
     1141 cagtatctag gtcacctatt cttgcaagat atttgtaact tggaaccaag acatattccg
     1201 catatcctcc gtcattgtat actccaagcg atctgggttt gtcgcataga ttctcctctc
     1261 caactctaca tgctggacag aggccttcgc ctatccaagg aaagacaagt accttctcgt
     1321 tttttgtaaa gccttcaaca tcttctccca tgctttcaac aactcctgca acttcatgtc
     1381 caggagtcaa cgggtacttg acacccctat cggttgtctt tataatctgg ccgcccaccc
     1441 cctcgtatcc tccatcccag agatgaatat cgctatggca tacccctgca gattccacct
     1501 tgattagtac ttgagatccg cgaggtttgg gaacttccat ggattgtatt tcaagtggtt
     1561 cctttattct aacaatcctt gcagccttca tgtttttcca tatggtatag tcatataaga
     1621 tagtttttgt gattccaatc catagcaatc aggcagcata aattttcaat ttttgtcata
     1681 accaaggaat aaagaaaatc aactgggtag aaagatcttt cttgttctga taatcaaccg
     1741 taagtttatt tatgacaaaa aaatattcgc agacatgaag ttcagaatgt ggtatgtcgc
     1801 aatgggaatt accgctgcag tgatctttgt gagcatgata tacttgggaa agatcctttg
     1861 tgtccctatg gaagacgccc cgtgtgtatc atttctagca aatacgtagt agatttaatt
     1921 aaaaccaagc caaagtgtac gatatgagct gttctggaga agtcctagag tcaagtaatg
     1981 actttatcca aattaaacca atgataatga accagctcaa aaaggccaag tatggagttt
     2041 ctgatcatgg tacagtagaa ttgtgtcatt acacaaaaaa atcattcaag aacgaaggcg
     2101 actgctacaa acacaagttt tatggaatct cgacacatcg atgcatggag ttttcacctg
     2161 caggcatgtt ttgcgaaaat agatgcgtct attgttggag gcccatggag ttttacagcg
     2221 ccatgaagat ggatccccag aagatagcac cacctgaaac cataatgtca aatttgatgg
     2281 aagagagaag gaaactgata atgggttatt atggagactc gcgacacgat gaaaaaaaat
     2341 tagacgaatc acttcttccc agtcattatg caatatctct ttccggagaa cctacaatgt
     2401 atccacaact tcccgagctg atacgatatt tgaagaaact tcccacaaca aaatcagtat
     2461 ttcttgttac taacggacag gagccggaga tgctgaaaag attgcaagac gaggatgccc
     2521 tacctacaca gttgtatctg tccaccaatg caccaaacaa agaaatcttc caaatggtca
     2581 atcgaccaaa atacgaggat gcgtgggaaa gatggaatac tagtcttgag ataatctcaa
     2641 actctgatac aagatcagtt cttaggctaa cacttatccg aggttacaac tgcagtgacg
     2701 aattgattcc tgagtatgca aaaatgatta gagattcagg catacacttt atcgaggcca
     2761 aatcatacat gcatattggc agatcgacca atagattaga acgctccgac atgttggaaa
     2821 tgtcagaggt caaacatttt gcaaatgaac tggcaaggca aagtg
//
LOCUS       DASPUS010000133         2325 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_69310, whole genome shotgun sequence.
ACCESSION   DASPUS010000133 DASPUS010000000
VERSION     DASPUS010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2325)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69310"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1299
                     /gene="argH"
                     /locus_tag="VEJ68_02980"
     CDS             <1..1299
                     /gene="argH"
                     /locus_tag="VEJ68_02980"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HXX05765.1"
                     /translation="ILSALEKLKKQNLSQRSDAEDIHELIESMVIKKAGKETGGKMHT
                     ARSRNDQVSLDIRMKIRSDINTVCFCLNQIIETLISLSEKYQHVLMPLYTHLQQAQVG
                     LFSHLLLSYADALFRDLDRFYVAYGRVNESPLGAGPVGGTSIPINRQSTAKMLGFKGL
                     VENSVDATTSRDFVAEYLGNASILMTNLSRMAEDLIIWSTSEFSFVELADQFTSTSSV
                     MPQKKNPDVLELVRGKTSQVIGYQMSVLSTLKGLPSGYNRDLQQIKVSIWPTSKIIIS
                     SLLVMNSLLKTIKVNERKLRQAIDVGYSISLDVAEYLVKSGVPFRESHRIVGNLVQIA
                     SKSKKLLTNLTESDLKSVILNNEISAKELSKIIQSSTPESSLANRKSQGSSGKMEQQR
                     MIKERKRKVQAYMVGTTRRSNEISEALELLDKKIRVLTKN"
     gene            1383..>2325
                     /locus_tag="VEJ68_02985"
     CDS             1383..>2325
                     /locus_tag="VEJ68_02985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05766.1"
                     /translation="MSLLLQVLLGSSIFVSLIILIVPSIFAETYYDKDYNFSINYPSG
                     WIRSEPSKINTPQGDGTIHWINTVDNSVQMNIRVGDGWGADQYKENCVENGMGGGYSE
                     IPEWNGPACSDFKVEESKTMKIDGLATTYNRYSEILTPLKSPNSQSTLILIQVNYEIG
                     KGTFNIVASANNETYSRFANSIDSIIESFSIGSIIKPSPQKQVEKGVNPSFVVCNDHL
                     VLMLKFSDGSPACVKPDTAQILVERGWGMIPSSVTSEQNDSILLPNKIKASNANFTLN
                     YAITGGNLTGIKDYLDTASVGIFVQASSNGNLTIDIPR"
BASE COUNT          826 a          387 c          429 g          683 t
ORIGIN      
        1 attttgagcg ctcttgaaaa attaaaaaaa caaaacttgt cacaaagatc tgatgcagaa
       61 gatattcatg aactgataga atcaatggta ataaaaaaag caggcaaaga aactggcggc
      121 aaaatgcata cagcaagatc aagaaacgac caagtttctc ttgatatacg tatgaaaatt
      181 cgttctgata tcaacactgt atgtttttgc ttaaaccaaa ttattgagac actcatctca
      241 ttatcagaga aatatcaaca tgtattgatg cctctataca cacatttgca acaagcacag
      301 gtcggactat tttcacattt gttattgtct tatgctgacg cacttttcag agatttagat
      361 agattttatg tagcatatgg cagagtcaac gaatctccat tgggtgcagg acctgttgga
      421 ggaacaagta tcccaattaa tagacaatct actgctaaga tgcttggttt taaaggactc
      481 gtagagaatt ctgttgatgc aacaacatca agggactttg tagcagaata tcttggtaat
      541 gcctcaatcc taatgacaaa cctcagtaga atggcagagg atttaatcat ctggtccaca
      601 tcggaatttt catttgttga acttgcagat caattcactt ctacctctag tgtgatgcca
      661 caaaaaaaga atcctgatgt gttagaactt gttagaggta aaacatctca agtcattgga
      721 tatcagatgt cagtattatc tactctcaaa ggccttccat ctggatacaa tagagatctt
      781 caacagatca aagtatcaat atggcctaca tccaaaatta taatatcatc tcttctagtg
      841 atgaactcac ttctaaaaac cataaaggtg aatgaaagaa agttgagaca agcaatagac
      901 gtaggatatt ctatctctct tgatgtggca gaatacttgg taaaaagtgg agttccattt
      961 agagaatctc acagaattgt tggtaatcta gtgcaaattg catctaaatc aaagaaattg
     1021 cttactaact tgacagaatc tgatctgaaa agcgtaattc tgaataatga aattagtgca
     1081 aaagaattgt ccaagataat ccagtctagc acccctgaat cctctcttgc aaataggaaa
     1141 tctcaaggct cctcaggtaa gatggaacag caacgcatga ttaaggagag aaaaagaaaa
     1201 gttcaagcct atatggttgg cacaactagg agatcaaacg agataagtga ggcacttgaa
     1261 ctcttagata agaagatcag agtattaaca aaaaattagt ccaaaatacg gacttgcttg
     1321 aatttgctgt taaaaaacaa taacatacaa atgcttttca tctttgaagt gttttaagat
     1381 gtatgtcttt attattgcaa gttttgctag gtagtagtat ttttgtatca ttaataattt
     1441 tgatagttcc ttcgatcttt gctgaaacat attacgataa agattataat ttttcaataa
     1501 actatccaag cgggtggatt cgttcagaac catcaaaaat taatacacct caaggagatg
     1561 gtacaattca ttggattaat acggtagata attcagtaca aatgaatatt agagttggtg
     1621 acggatgggg tgctgatcaa tacaaagaaa actgtgtaga aaatggaatg ggtggaggat
     1681 attctgaaat tcctgaatgg aatggacctg catgttctga cttcaaagtt gaagaatcaa
     1741 agaccatgaa aattgacggt ctagccacaa cgtataacag gtattccgaa attttaacac
     1801 ctttaaaatc tccaaactct cagtctacat taattttaat tcaggtaaat tatgaaattg
     1861 gaaaaggaac ttttaatata gtggctagtg ccaataatga aacatattca aggtttgcaa
     1921 attccattga ctcgataata gagtcattta gcatagggtc tataataaaa ccttcacccc
     1981 aaaaacaggt agaaaaagga gttaatcctt ccttcgtagt ttgcaatgat catttggtct
     2041 tgatgttgaa attctctgat ggttctcctg cttgtgttaa accagataca gcacagatac
     2101 ttgttgaacg tggatgggga atgataccaa gttcagtaac atcagaacag aatgactcca
     2161 tattattgcc aaataagata aaggcatcaa atgctaactt tacactaaat tatgctatta
     2221 ctggcggcaa tctaactgga atcaaagatt atttggatac tgcgtccgtt ggcatttttg
     2281 tacaagcgtc aagtaacgga aatttaacaa tcgatatacc aagag
//
LOCUS       DASPUS010000134         2545 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1023120, whole genome shotgun sequence.
ACCESSION   DASPUS010000134 DASPUS010000000
VERSION     DASPUS010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2545)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2545
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1023120"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..488
                     /locus_tag="VEJ68_02990"
     CDS             <1..488
                     /locus_tag="VEJ68_02990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HXX05767.1"
                     /translation="KAVVGDPTCNIAGFTSGWEGPGAKTVLPSKALVKIDFRLVPKMN
                     PLKQLSRLKEHLKKKGFGDVKVNMIHGEAASRTKISDPFVKIVKKSANESFGTSIVSV
                     SSAGTGPMYSFYKVLKAPCISVGSTYVYSRIHSPNEFARIDLLKKTTKCICKIMRNFS
                     R"
     gene            569..1147
                     /locus_tag="VEJ68_02995"
     CDS             569..1147
                     /locus_tag="VEJ68_02995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome subunit beta"
                     /protein_id="HXX05768.1"
                     /translation="MPGATAVGITYDGGVVLASERRVAYGNFVVSKSTKKTFSITGFV
                     GACCAGMVADMQVLAMQMRALTKIRKLELKREIPPNSVAKMMSSLMYERRFYPLLTQV
                     IVGGVDGEAAIYTLDPLGSVLPDDYAAVGTGAEMALGVLDQEYKKGLKEKEAVTLAVK
                     SIKSAIMRDAASGEGIDVLVADKNGIREFTEN"
     gene            complement(1144..1623)
                     /locus_tag="VEJ68_03000"
     CDS             complement(1144..1623)
                     /locus_tag="VEJ68_03000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PUA domain-containing protein"
                     /protein_id="HXX05769.1"
                     /translation="MKSHPLSKSDSNVILGEISSQWNIELPKLKTLILYEIDENTSLI
                     TSENFTIVKIDGIHVPFLSETSLLEKFPKVVVDAGAIKFVCNGANVMRPGIKKFTEFK
                     KDDLVCIVEETHNKFLAVGKAMVSSDEMQNITKGEMVKNLHYISDKYWESAKLIKKN"
     gene            complement(1620..>2545)
                     /locus_tag="VEJ68_03005"
     CDS             complement(1620..>2545)
                     /locus_tag="VEJ68_03005"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HXX05770.1"
                     /translation="HGLKPRIIGVFDSKGSAASSAGLDLNRLLEVKKKYGNIRKYHNK
                     ERDANGLDMIKGMDAEVLIETTPSNYKDAEPGMSHIVTAMKNGLHVITVNKGPLALAF
                     PSLIELATYNQVQLKFSGTVGGGTPILDYAKNSLRGERILSFQGILNGTTNYILTNMT
                     GGMTFKVALADAKKKGYVEADESLDIDGFDAAAKLVILANWIMDMKVTMKDIKRIGIR
                     DVSTSDIKMAHKHKSAVKLIASCDTDLEVSPKEIPLDDPLCVNGTLNAIRFNSEHSGQ
                     QTIIGRGAGGMETASSILRDLLDIKQEMSRI"
BASE COUNT          745 a          480 c          494 g          826 t
ORIGIN      
        1 gaaaagcagt ggttggagac cccacttgta atattgcagg attcacatct ggatgggaag
       61 gacctggtgc taaaacagtt cttccttcca aggcgctggt aaaaattgat ttcagactgg
      121 taccgaaaat gaatccactc aagcaattgt cgagactcaa ggaacatcta aaaaagaaag
      181 ggtttggtga tgttaaagtc aacatgattc atggcgaagc tgcatcaaga actaaaatct
      241 ctgatccatt tgtaaaaata gtaaaaaaat ctgcaaacga atcatttgga acctcgatag
      301 tcagtgtatc atctgcagga actggcccaa tgtactcatt ttacaaagta ctcaaagctc
      361 catgcatatc ggtaggaagt acttatgtct attctagaat tcactctcct aacgaatttg
      421 caaggataga tttgttgaag aaaactacaa aatgtatctg taaaataatg agaaatttta
      481 gtaggtaaat gaattctgat cgttacgagg ttttagagaa aggcctttat tgtgctcatc
      541 ttgcagttca aatatggcct ttatgtacat gccaggcgca acagcagtag ggattactta
      601 tgatggtggc gtggtgcttg caagcgaaag aagagtagct tatggtaact ttgtggtaag
      661 taagagtaca aaaaagacat tttccattac gggctttgta ggtgcttgtt gtgcaggaat
      721 ggttgctgat atgcaggtac ttgccatgca gatgcgcgcc ttgacaaaaa taagaaaact
      781 ggaactcaaa agagagattc ccccaaactc tgtagctaaa atgatgtcta gcttgatgta
      841 tgagagacga ttctatccgt tgcttactca agtaatagtg ggaggcgttg atggtgaagc
      901 cgcaatttac acacttgatc ctttaggatc tgtactgcca gatgattatg ctgcagtagg
      961 aacaggtgct gagatggcac ttggagtctt ggatcaggaa tacaagaaag gattgaagga
     1021 gaaagaagcc gtaacattag cagtaaaatc aatcaaatcc gcaataatga gagatgctgc
     1081 aagtggcgaa ggaatagacg tgcttgtcgc agacaaaaac ggaataagag aatttacaga
     1141 aaactagttc ttctttatta atttcgcaga ttcccaatat ttgtcagaaa tgtaatgtag
     1201 attttttacc atctctcctt ttgtgatatt ttgcatctca tcacttgaaa ccatagcttt
     1261 gcccactgca agaaacttgt tgtgagtttc ttctactatg caaaccagat cgtctttttt
     1321 aaattctgtg aattttttta taccaggtct catcacattt gctccattgc aaacaaactt
     1381 tattgctccc gcatctacta ctactttagg aaatttttca agtagtgatg tttctgatag
     1441 aaatggaaca tgaattccgt ctatttttac aattgtaaaa ttttcacttg ttattagaga
     1501 tgtattttca tcaatctcgt ataagatcaa cgtctttagt tttggcaatt caatgttcca
     1561 ctgagatgaa atttcgccaa gtattacatt actatcgctt ttggaaagcg ggtgggattt
     1621 caaatcctgg acatttcctg ttttatgtct aataaatctc tcagtattga acttgcagtc
     1681 tccatgccac cagcgcctcg tcctattatt gtctgttgac cagaatgctc tgaattaaat
     1741 ctaattgcat ttaacgttcc attgacacat aatggatcat caagtggtat ctcttttggt
     1801 gatacttcca ggtctgtatc acatgatgca atcaacttga cagcagattt gtgtttatga
     1861 gccattttaa tatctgatgt cgaaacatct ctaatcccta tgcgtttgat atctttcatt
     1921 gtaactttca tgtccataat ccagtttgca agtatgacaa gttttgcagc agcgtcaaaa
     1981 ccatcgatgt caagggattc atctgcttca acatatccct ttttctttgc gtctgcaagc
     2041 gccaccttga atgtcattcc acctgtcata tttgttagaa tgtaatttgt tgtgccattg
     2101 agtattcctt ggaatgaaag aattctttct cccctgagac tattttttgc ataatctagt
     2161 atgggggttc ctcctcctac agttccacta aatttcaatt gtacctgatt gtacgttgcc
     2221 aattcaatca gtgagggaaa ggcaagagct aacgggcctt tgtttacagt tatcacatgc
     2281 aacccatttt tcattgcagt gacaatatgt gacatgcccg gttcggcatc tttgtaattg
     2341 cttggtgtag tctcaataag aacttcggca tccatgcctt ttatcatgtc aagaccattt
     2401 gcgtctcttt ctttattgtg atattttctt atgttgccat attttttttt cacttctaac
     2461 agtctattca aatcaaggcc agcagaagaa gctgcagaac ctttactatc aaatactcca
     2521 ataattcttg gtttcagtcc atgtt
//
LOCUS       DASPUS010000135         5004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_903735, whole genome shotgun sequence.
ACCESSION   DASPUS010000135 DASPUS010000000
VERSION     DASPUS010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5004)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5004
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_903735"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(165..692)
                     /locus_tag="VEJ68_03010"
     CDS             complement(165..692)
                     /locus_tag="VEJ68_03010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HXX05771.1"
                     /translation="MKHSSLLNEAYELCEEGEYTLALEYYDIILYKEPKNITALVNKG
                     VTLQNLRKNKQAVKCYDEALKFDGKNIDALVNKGSVLHTLGKYHEAIDCYDKTLKIQP
                     KYAMAMAYKGLSLGELGLLKEAIKCFNAALQIDKKYDVALNNKAIALELLKANAKLKP
                     KLRKDDLKKKQVKIN"
     gene            823..1446
                     /locus_tag="VEJ68_03015"
     CDS             823..1446
                     /locus_tag="VEJ68_03015"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HXX05772.1"
                     /translation="MHTVVFDFDGTIADTLSVVIRIANKFADHYGYKKIPLSDLPKLR
                     EKKPSQVLKHLGISIFKLPIVARKIRFEMNKEIVHLETAADLQKTLLSLKEKGCVLGI
                     LTTNSRENVMEFLKNNNLELFDFVYAGRAVYGKSRLLKKLMKDKTIPHEDPIYVGDEI
                     RDVEAAKKAGIRVIGVSWGYNSKEALQKAKPDHVVEKPEELQEIIFS"
     gene            1504..1707
                     /locus_tag="VEJ68_03020"
     CDS             1504..1707
                     /locus_tag="VEJ68_03020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008296784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05773.1"
                     /translation="MSSDVTEEEKILQTPDSGFNLCGIDYFEPLGKRLYFIEHYEKYQ
                     DALNAKKERENPNEYLILYKGMP"
     gene            1780..2064
                     /locus_tag="VEJ68_03025"
     CDS             1780..2064
                     /locus_tag="VEJ68_03025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05774.1"
                     /translation="MSLTPDFRKYLDETIHSIIIGIPALKNEYPKFKNEWKFDSNFDF
                     LYGCIVGQILGACLTAFKLIHSREARTDEILIIGEIVESYFPLIRDEIKD"
     gene            complement(2061..2525)
                     /locus_tag="VEJ68_03030"
     CDS             complement(2061..2525)
                     /locus_tag="VEJ68_03030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05775.1"
                     /translation="MQSSSLMVSKITGVILFVMGVILVVFGVFLHYTIPLILAKLYLL
                     NGNQQEMIKSVLSGTIGSLLVGGIIAFGITDIVVAIGLIKKKKWAVKSIIMLIIAAAS
                     LNLLTLAGMPNYTTLTMMIIGATIDAGILLYVWKKSNIDMNSSKQSGLVSKN"
     gene            complement(2602..2844)
                     /locus_tag="VEJ68_03035"
     CDS             complement(2602..2844)
                     /locus_tag="VEJ68_03035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008300514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05776.1"
                     /translation="MSANTMKKARALAKDGVVKIEEDLYQVKSTSDPSKSYFVSSNTC
                     ECEGFKNFYKFHHGKGLTANCSHLEAVKIFKKIKEN"
     gene            2942..3142
                     /locus_tag="VEJ68_03040"
     CDS             2942..3142
                     /locus_tag="VEJ68_03040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05777.1"
                     /translation="MNAKDDDAESEVLKEMFDEIMRMIREKQIKLEAIIQNMIEQDKM
                     SHDTFVRVYMLLTEHGKKKQWS"
     gene            complement(3150..3602)
                     /locus_tag="VEJ68_03045"
     CDS             complement(3150..3602)
                     /locus_tag="VEJ68_03045"
                     /inference="COORDINATES: protein motif:HMM:NF039207.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05778.1"
                     /translation="MSMKLILRGKTVEDEITANAIYKILGDKHSRRILESLIESPKSA
                     LDISKECKISLALSYKKLKNLKKYDLIQQSNSVIVDGRKYAIYKSKAHPIMILLNHKH
                     PSQTIVIDSENLVNCVGCESLNCGVYYDERYNGVRSVCYSCGANWPES"
     gene            complement(3691..4053)
                     /locus_tag="VEJ68_03050"
     CDS             complement(3691..4053)
                     /locus_tag="VEJ68_03050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05779.1"
                     /translation="MTQSSKQIDSCMQIIDLDNAIRFAGRIKDRKLISFARKQNTTPM
                     LDEELSNMAHYQASVKAAWEDMFNDTLGKTNWLITSKEKVKLITLFLDDGLLILSTDP
                     NSDHDSIIKKIQKLNVKL"
     gene            complement(4182..4388)
                     /locus_tag="VEJ68_03055"
     CDS             complement(4182..4388)
                     /locus_tag="VEJ68_03055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008298620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05780.1"
                     /translation="MRDINEVMPRIPNMRWGALMNKIPTNKKVKEMNKMFPGDGRWHT
                     VFEEEEQIFVDGIRVWKKDPKSWT"
     gene            4482..4613
                     /locus_tag="VEJ68_03060"
     CDS             4482..4613
                     /locus_tag="VEJ68_03060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05781.1"
                     /translation="MRKEFCHICKEGGKECIDVDTKGEVYLEMYHIRCAKCGAPLVS"
     gene            4677..>5004
                     /locus_tag="VEJ68_03065"
     CDS             4677..>5004
                     /locus_tag="VEJ68_03065"
                     /inference="COORDINATES: protein motif:HMM:NF012452.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome subunit beta"
                     /protein_id="HXX05782.1"
                     /translation="MTTIVGIKTKDGVVLGSDKRASKGFFIGSKIVQKIAKIDETLAV
                     AIAGQLSDAEYIIKVAKAERRLMELRRGFSLTVKESTRLIANLAYSGLRNYQPYYVEL
                     SVAGVDQ"
BASE COUNT         1604 a          852 c          898 g         1650 t
ORIGIN      
        1 accacggcag atgttaattt ggatttgaag acttctggat ttctttcatg gatgttaggt
       61 tttgttcctg acagttcatt gtcttctgca cttgcaaatg gatttgacaa atttgtggaa
      121 cattcaaaaa cagtctagaa ggcattgcca taaaacatca atgattaatt gattttaacc
      181 tgttttttct tcaaatcatc ttttcgtagt ttgggtttta atttggcatt tgctttcaaa
      241 agctctaagg caatagcttt attgttcaga gctacatcat attttttatc tatttgaaga
      301 gccgcattga aacatttgat agcctccttt agcagtccga gttctcccag agacaatcct
      361 ttgtatgcca tagccatagc atactttggt tggatcttta aagtcttatc atagcaatcg
      421 atagcctcat ggtatttacc cagagtgtgt aataccgatc ctttgttaac caacgcatct
      481 atatttttac catcaaattt gagagcttcg tcataacact tgacggcctg cttgttcttc
      541 cgcaggtttt ggagtgtgac acctttgttt actagagcgg taatattctt tggttctttg
      601 tacaaaataa tatcatagta ttccaaggca agcgtgtact cgccttcttc acatagttcg
      661 taagcctcat ttagaagaga agaatgcttc atcttttcgt attataatac ttggtcataa
      721 tattctttta tcaagcaatt caagaggatt aatttggtat aacgaattta gaattacaat
      781 tcacaacagt ctttaaaggg acttttcttg cgagataata atatgcatac agttgtcttt
      841 gattttgacg gcactatagc tgacacttta tccgtagtaa tacgcatagc taacaaattt
      901 gcagatcatt atggatacaa aaagatacca ctaagcgatc tacctaagct tagggagaaa
      961 aaaccaagcc aagtgctgaa acacttgggc atatcaattt tcaagcttcc tattgttgca
     1021 agaaagataa gatttgaaat gaataaagaa atagttcatt tagaaactgc tgcagatctt
     1081 caaaaaaccc ttctaagcct taaagaaaaa ggctgtgtac ttggaatatt aactacaaat
     1141 tctagggaaa atgtcatgga gtttttgaaa aataacaatt tagagctttt tgattttgtt
     1201 tatgcaggaa gagccgtata tggaaaaagt agattattaa aaaaattaat gaaagataaa
     1261 accattcccc atgaggatcc aatttacgtc ggagacgaaa taagggacgt agaagcagct
     1321 aaaaaagcag gaattcgagt gatcggtgtt tcttggggat acaacagcaa ggaagcactt
     1381 caaaaggcaa aaccagatca tgttgtagaa aaaccagagg aactccagga aattattttt
     1441 agttgataat acttccaaac tagattccgt acatatttag agtcatgaat tattttgttg
     1501 agcatgagtt ctgatgttac agaagaggaa aagattttac agacacctga ttcaggattc
     1561 aatctttgcg gaattgatta tttcgaacct ttaggtaaga ggctttattt tatagaacat
     1621 tatgaaaaat atcaggatgc actaaatgca aaaaaagaaa gagaaaatcc aaatgaatat
     1681 cttattttat acaagggaat gccataattg ggaatatttt agactgcgtt atttatttaa
     1741 tggattaatt taatactaat ttgtataaca tgagacaaca tgtcgttgac tcctgatttt
     1801 agaaaatatc tggacgaaac catccatagc ataataatcg gcattccagc actgaaaaat
     1861 gaatatccta aatttaaaaa cgaatggaag tttgatagta attttgattt cttgtacggg
     1921 tgtatagtag gacagattct tggagcatgt cttactgcgt ttaaattaat tcatagcagg
     1981 gaggcaagaa cagatgagat actaataatt ggcgagatag tagaatccta ttttccactt
     2041 atcagagatg aaataaaaga ctagttcttg cttacaagcc cggattgctt ggaagaattc
     2101 atgtcgatat tgctcttctt ccaaacgtat agtaaaattc ccgcatcaat tgttgcacct
     2161 attatcatca tagtaagcgt cgtataattt ggcatacctg ccaaagttaa gagattaagt
     2221 gaagctgctg caatgattaa catgataatt gattttactg cccatttctt tttcttaatc
     2281 aatccaatgg ccacgacaat gtctgttata ccaaaggcaa taatgccacc aactaggaga
     2341 gaccctatag ttccggatag gacggacttt atcatctctt gctgattgcc atttagaaga
     2401 tacagttttg caagtattag tggaatggta taatggagga aaactccgaa gacaaccagt
     2461 attactccca taacaaagag tataacacct gtaatctttg ataccatgag agatgatgat
     2521 tgcatgatat actatgcgtc caacccaatt gtaattaaaa gtagctctga tcggcatttt
     2581 ccatttttgg aaaatgcttt cctagttttc tttgattttc ttgaagattt ttacagcttc
     2641 tagatgggaa cagttcgcag taagtccctt cccatgatga aatttataga aattcttgaa
     2701 cccttcacat tcacaagtat tggatgatac aaaatatgat tttgaagggt cgctagtaga
     2761 ttttacctgg taaagatcct cttcaatctt tacaacccca tcttttgcca aagcccttgc
     2821 cttcttcatt gtatttgcac tcatgaattt ggttcttcat acttgttaaa aaatccttga
     2881 gaagagaatt caatgcccat tcataagatt taatcaactg gaaactggat agttgtatta
     2941 catgaacgca aaggatgatg atgcagagtc tgaggtgtta aaggaaatgt ttgatgaaat
     3001 catgaggatg attcgcgaga aacaaatcaa actagaagct atcatacaga acatgattga
     3061 acaagacaag atgtctcatg atacatttgt cagagtttac atgttattga cggagcatgg
     3121 aaaaaagaaa cagtggtcat gagttaacat catgattctg gccagttggc accgcaggag
     3181 taacagacac tccttacacc attatatcgt tcatcatagt aaacaccaca atttagggac
     3241 tcacatccca cacaattaac aaggttttca gagtcaatca ctattgtttg agacggatgt
     3301 ttgtggttta atagaatcat tattgggtgt gccttgcttt tgtagatggc atatttacgt
     3361 ccatccacta ttacagagtt tgattgttgt ataagatcat atttttttag gtttttgagt
     3421 tttttgtaag acaacgctaa agagatcttg cattctttac ttatatccaa agcagatttt
     3481 ggagattcta ttagagattc caagattctt cttgaatgtt tatcgcccaa aatcttatag
     3541 attgcattag ctgtaatttc atcttcgact gtttttcctc gcagtattag tttcatgctc
     3601 atgttaatca cacagcaacc aagttgcctt ttattattat tctaaaactc tgagataaaa
     3661 agaaatctgt ataggtaata atttttatgt ttataatttc acattgagtt tttgaatctt
     3721 ctttattatc gaatcgtgat ctgaatttgg atctgttgac aatattagta gaccatcgtc
     3781 caagaagagc gtaatgagtt tgaccttttc tttcgatgtt attagccagt ttgtttttcc
     3841 aagggtatcg ttgaacatat cctcccatgc tgctttaact gatgcctgat aatgtgccat
     3901 gttgctcagt tcttcatcaa gcataggcgt agtattttgt tttctggcaa aagagatcaa
     3961 tttccgatct tttattctac cagcaaaacg aatagcatta tccaagtcaa ttatctgcat
     4021 acatgaatct atctgctttg agctttgggt caattcctag gttaacattt ttgaaaagga
     4081 gatttaatct tattgcctga atcaaagatt atattatcag tcattttcaa aattggaaaa
     4141 tttcgatttt ctaatcaaac attatatgaa tacacagata ctcatgtcca agattttgga
     4201 tcttttttcc agactcttat accatcaaca aaaatctgtt cttcctcttc aaagacagta
     4261 tgccatctac catcaccagg aaacatttta ttcatttctt taaccttctt gtttgtaggt
     4321 attttgttca ttaaagcacc ccacctcatg ttaggaattc gtggcattac ttcattgatg
     4381 tctctcatac aggtaagaac ctcatccatc ttttaatttc ttgcgtaagc atatttagtc
     4441 aatataacca actttattat tttgattgac gtattatgat tatgcgaaaa gagttttgcc
     4501 acatttgtaa agaaggtggc aaggaatgta tagacgttga taccaaagga gaggtatatc
     4561 tggaaatgta tcacataaga tgtgccaagt gtggcgcacc tttggtatct tgatttttcc
     4621 agtgactaat ttctgatatt attagtcaat taatcctcca cagttgtaac aatatcatga
     4681 caacaatagt tggaatcaaa acaaaagatg gagtagttct tggctcagac aaaagagcaa
     4741 gcaagggttt cttcatagga tcaaaaatag tccaaaaaat tgcaaagata gatgaaacat
     4801 tggcagtagc tatagcagga cagctctctg atgcagaata catcatcaag gtggcaaaag
     4861 ctgaacgccg actaatggaa ttgagaaggg gattttcttt aactgtcaaa gagtccacca
     4921 gattgattgc aaatctagcc tattcaggct tgagaaacta tcagccatac tatgtggaat
     4981 tgtcggttgc aggtgttgat caac
//
LOCUS       DASPUS010000136         6717 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_622317, whole genome shotgun sequence.
ACCESSION   DASPUS010000136 DASPUS010000000
VERSION     DASPUS010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 6717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6717)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6717
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_622317"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VEJ68_03070"
     CDS             <1..276
                     /locus_tag="VEJ68_03070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II"
                     /protein_id="HXX05783.1"
                     /translation="LDKTRKIISRERKFLKESISKINGFSCYNSDVNFLLIKSKNNSK
                     YIQKKLLKKNILIRDCSTFRGLNNNFIRIAVRTHEENLKLIKELEKI"
     gene            273..1115
                     /locus_tag="VEJ68_03075"
     CDS             273..1115
                     /locus_tag="VEJ68_03075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobyric acid synthase"
                     /protein_id="HXX05784.1"
                     /translation="MTKVLMIQGTSSGVGKTTLVTALCRIFSDEGYKVAPFKSQNMSS
                     FSYRNDDFEISRAQAIQAIAARTDISPYMNPILLKPIGDYKSEIFIKGKFYQKMHAND
                     YYKKFALTKGFAVAKKSLDYLRDRYDLVILEGAGSPAEINLVKYDIANMKMAQYCSAP
                     VILVTDIDKGGSVASIIGTLSILEQQYRKLIKGIVINKFRGDLEILRPSFSYLKKKTG
                     KPVLGTIPLLEFDIPEEDSLHAKPKQVSWTEKYLRTLNKEIEYLKRIVRSSVNMKAIG
                     DLLN"
     gene            1112..2104
                     /locus_tag="VEJ68_03080"
     CDS             1112..2104
                     /locus_tag="VEJ68_03080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010192155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein"
                     /protein_id="HXX05785.1"
                     /translation="MNFVPILAIVFALVIDITLGEPRNKYHPTVWMGTLVGKLVPLTR
                     STSQKLEKINGVILVISLTAFISILVVVFESGLQQLESIDFICLSKILATIFVILSVG
                     LLLKTTIAIKGMEQHACKIMEAVSRNDLNDARAKLSMIVKRNTKDLDREHIISATLES
                     ISENTVDGITGPLFYFAIFGLVGSFVYRTINTMDSMIGYKTDLFRNLGWFGANCDKVL
                     NFVPSRLTSLIMVLACMSMGGNWRHSLAVMKRDGHKTESPNAGYPMATMAGALGVRFE
                     KVDHYTLGDELSEITDNHVKTAISIMRITTILFVVLFTIPIIVILSYLGWWTFV"
     gene            2097..2822
                     /gene="cobS"
                     /locus_tag="VEJ68_03085"
     CDS             2097..2822
                     /gene="cobS"
                     /locus_tag="VEJ68_03085"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008818 - cobalamin 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HXX05786.1"
                     /translation="MFKGIASVISFLTIIPSKNTQLDTVAKNMYLFPIAAALIGLIVG
                     GAGYGLSMFVQPLIVGLLLTGALVIITGIHHTDALCDFADGMMAKGTKEKKLQAMRDP
                     AVGSAGVVTVVLYVAGMIMSISMMKGLVLFEAILLSELMAKFAMVLQANRGISAWQGL
                     SSPFTQSMKDPRKLGIAAVLAIIPTVLLGGITGVIVVTVSIGLSFLLLFVSKRSFGGI
                     SGDVFGASNELVRLASLLIFATR"
     gene            2819..3409
                     /locus_tag="VEJ68_03090"
     CDS             2819..3409
                     /locus_tag="VEJ68_03090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HXX05787.1"
                     /translation="MIGLVMCGGKGTRMESTEEKLLLKYKKPIIQHVITALQESGCFS
                     KIVCATSPNAPKTRQFVKELGILDMETKGNGYVNDLNEILSKLVDDDQVFVTAGDLPL
                     LDALIVKEIVQREKNKDPWLCVVVSKKFLDMLGLTSEYSLTYDNKECVYTGISIVDAR
                     KISDMKEVKESYVILEDKRIAINLNTKKDYDLLCAA"
     gene            complement(3392..3589)
                     /locus_tag="VEJ68_03095"
     CDS             complement(3392..3589)
                     /locus_tag="VEJ68_03095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S27e"
                     /protein_id="HXX05788.1"
                     /translation="MKKAQILIPKPGSKFQRVQCKECGEESVVYSHVSSIVTCKACGN
                     TLAEPKGSIATINGKILGSAE"
     gene            complement(3589..3867)
                     /locus_tag="VEJ68_03100"
     CDS             complement(3589..3867)
                     /locus_tag="VEJ68_03100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008301293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L44e"
                     /protein_id="HXX05789.1"
                     /translation="MNMPKEIRRYCPKCKKHTLQKVSLYKAGKRRGSAIGERRHAEDK
                     KGYGGQKFPKLAKPAKTTKKLTPLLMCPECKKKFNVEGIRLRKLELVA"
     gene            4028..4393
                     /locus_tag="VEJ68_03105"
     CDS             4028..4393
                     /locus_tag="VEJ68_03105"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HXX05790.1"
                     /translation="MKILVVDDNNDINKLLAKYFEAKGHDCIATKDGYEGFQLCVNNK
                     FDAIILDLAMPGFTGKDFLDSLDQRGIINKQKIIVLTALPLGDVTIEDGHHGICQVLQ
                     KPCRLEDLMKTLTTLTAVS"
     gene            4553..6073
                     /locus_tag="VEJ68_03110"
     CDS             4553..6073
                     /locus_tag="VEJ68_03110"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HXX05791.1"
                     /translation="MRTFLQIAIISISFFYIMVAIGFVLLVESNKLELIGKLTKETEI
                     LFNGNQQLVYFDIFVLTVVIGIFVFFVVRSVTNPLRKLRYAADKIARGYLDVKIPTRG
                     TDEVRDLAHSLQAMVNAIRKEKALQSAALQKYRNLYETSSNLYRTVNLDGIITNCNRL
                     FAERLGYTVLEVIGTHYNKYTAPKDVQTMNESFKNWKEKGFLKDVEIWLKSRDGTIFP
                     TLISTSNLYDENDNLIGCNEVIRDISEIYEARKKLEQDAILQIQLYETKKVDKLKNEF
                     SSMMTHELKTPLVPIMGNCEMLKEPGLLGDLNQDQTDSVDMIYQNAARLEKLIGDILL
                     AQRLEIGQITYDKQRFSVTKLMNEIEDDYSQIMKVKQIKFVNLTPEDLSLWSDKSRIR
                     QVIDNLIQNAVDFTPQNDGRIEICAKNEDNKIFFSVRDNGMGIPKEIQPVMFKKFYQV
                     DASHRRKHTGTGLGLVTSKGIVEGLGGEIWFESEPGKSTIFYFNIPQEVLYRNRIA"
     gene            6146..6517
                     /locus_tag="VEJ68_03115"
     CDS             6146..6517
                     /locus_tag="VEJ68_03115"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HXX05792.1"
                     /translation="MKLLLIEDNHDVSKMVSQYLRLKGYDCMVADNGKDGLDQIINGK
                     YDVVLLDLAMPEFSGYDVIASLEAKGKLVDQKLIILTVYALSDEKIKGLESRGVYACI
                     KKPVQLQELVKTIQSCTSSQN"
BASE COUNT         2265 a         1104 c         1313 g         2035 t
ORIGIN      
        1 cttgacaaga caagaaaaat aatctcaaga gagcggaaat ttttaaaaga atccatatca
       61 aaaattaatg gatttagttg ttataattcc gacgtaaatt ttcttttgat aaaatcaaaa
      121 aataattcca aatatataca aaagaaactt ttaaagaaaa atattttgat acgagattgt
      181 agtaccttta gaggattgaa caacaatttc atacggattg cagtacgaac acatgaagaa
      241 aatttgaaac taatcaagga attagaaaag atatgacaaa agtattgatg attcaaggaa
      301 catcttctgg tgttggcaaa actactcttg ttacggcttt gtgtagaatt ttttctgatg
      361 aaggctataa agtggctcca ttcaaatctc aaaatatgtc atcattttct tatcgaaatg
      421 atgactttga gatctcacga gcacaggcaa tacaggcaat tgcagcaaga accgatatca
      481 gcccttacat gaatccaatt ttactcaaac caattggaga ttataaaagt gagattttca
      541 tcaaaggaaa gttttaccag aaaatgcatg ccaatgatta ttacaagaaa ttcgcactca
      601 caaagggatt tgctgttgca aaaaaatctc ttgattattt gcgtgataga tatgatttag
      661 taattcttga aggtgctggt tcgcctgcag aaattaacct agtaaagtat gatatagcca
      721 acatgaagat ggctcaatac tgctctgctc cagtgattct tgtaaccgat atagacaaag
      781 ggggcagtgt tgctagcatt atagggacat tatctatcct agaacaacaa tacaggaaac
      841 tcatcaaagg tattgtgata aacaagttta gaggcgatct tgaaatctta cgtcctagtt
      901 tttcttatct aaaaaagaaa actggtaaac cagttcttgg tacaattcca ttactagagt
      961 ttgacatccc agaagaagat tcgctacatg ctaaaccgaa acaagtttca tggacagaga
     1021 aatatttacg gacattgaat aaagaaatag aatatttgaa acgcattgtt agatcaagtg
     1081 tgaacatgaa agcaatcggt gatctgctca attgaatttt gtaccaattc tagctatagt
     1141 ttttgccctt gttattgata ttacactagg tgaaccacga aacaaatatc atccaactgt
     1201 atggatgggt actcttgttg gtaaacttgt tcccttgaca aggtcaacta gtcaaaaatt
     1261 agaaaaaatt aatggagtta ttcttgttat ttctttaacc gcatttattt cgattctagt
     1321 ggttgttttt gagtctggac ttcaacaact tgaaagtatt gattttatat gcctctcaaa
     1381 aattcttgct accatatttg ttatactaag tgttggatta ctgctcaaaa caacaattgc
     1441 aattaaagga atggaacaac atgcatgcaa aattatggaa gcggtatcaa ggaatgattt
     1501 gaacgatgcg agagcaaaac tatcaatgat agtgaaaaga aatactaagg atctagacag
     1561 agagcacata atttctgcca cgcttgagag tataagcgaa aacactgtgg acgggataac
     1621 tggacctcta ttttattttg caatttttgg ccttgtagga agtttcgttt atagaactat
     1681 caataccatg gattcgatga taggctacaa gactgatctt ttcagaaatc taggttggtt
     1741 tggagctaat tgtgataaag tgctaaactt tgttccctca agactcacaa gtctaatcat
     1801 ggtacttgca tgcatgagta tgggagggaa ctggagacat tctcttgccg tcatgaaaag
     1861 agatggccat aaaactgaaa gtcccaacgc aggatatcct atggctacaa tggcaggagc
     1921 tttaggtgta agatttgaaa aggtagatca ctatacacta ggtgatgaac tctccgaaat
     1981 tacagataac cacgtcaaaa ctgcgatatc aattatgagg attacaacaa tcttgtttgt
     2041 tgtgttgttt acaattccta tcattgtaat tttatcttat ctcggatggt ggacttttgt
     2101 ttaaaggaat tgcatcagta atttcatttc taaccatcat tccgtcaaaa aatacacaac
     2161 ttgatacagt tgcaaaaaac atgtatctct ttcctattgc ggctgcattg ataggattaa
     2221 ttgtaggcgg agcaggttat ggcctttcaa tgtttgttca acctttgata gtaggtttgc
     2281 tcttaacagg agcacttgtg atcattactg gaatacatca tacagatgca ttgtgtgatt
     2341 ttgctgatgg catgatggca aaaggcacaa aagaaaaaaa attacaggcc atgcgcgatc
     2401 cagcagtagg atccgcaggt gtagttacag tagttcttta cgtagctgga atgataatgt
     2461 caatttccat gatgaaaggt cttgtcctct ttgaggctat tttattgagc gaacttatgg
     2521 caaaatttgc gatggttctt caagcaaatc gtggaatttc tgcatggcaa ggactaagtt
     2581 ctccatttac acaatctatg aaggatccac gaaaattggg cattgcggca gtattagcta
     2641 taataccaac tgtcttgctt gggggaataa ctggagtaat cgtggttaca gtctctatag
     2701 gattgtcatt tttgttacta tttgtttcaa agagaagctt tggaggtata tcgggggatg
     2761 tatttggcgc aagtaatgaa cttgttaggc ttgcatcctt gttgattttt gcaacaagat
     2821 gataggacta gtaatgtgtg gtggcaaagg tacaaggatg gaatcaacag aggaaaaact
     2881 acttctcaaa tacaaaaaac caataattca acatgtaata acagctctac aagaatcggg
     2941 gtgcttctca aaaatagtat gcgctacaag ccctaatgcg cccaaaacac gtcaatttgt
     3001 aaaagaattg ggaatcctag atatggaaac taaaggtaat ggttatgtca acgatctaaa
     3061 cgaaatactg tcaaaacttg ttgatgatga tcaagtcttt gtaacagctg gagatttgcc
     3121 tcttttggat gcattaattg taaaagaaat tgtgcaacgt gaaaaaaaca aagatccatg
     3181 gctttgtgtt gttgtcagta agaaatttct agatatgctt ggcttgacat cggaatacag
     3241 tttgacctat gacaacaagg aatgcgtata cactgggatc tctattgtag atgctaggaa
     3301 aatctctgat atgaaggaag taaaagaatc gtatgttata cttgaggata aacgaatcgc
     3361 gataaatctt aacacaaaaa aagattacga cttactctgc gctgcctagg atcttaccgt
     3421 ttattgtggc aatagaaccc tttggttcag ccaacgtatt tccacaagcc ttgcaagtaa
     3481 ctatgctgga aacatgtgaa taaacaacac tctcttcacc acattctttg cactgcactc
     3541 gttgaaactt gcttccaggt tttggaatta gaatttgtgc ctttttcatt atgcaactaa
     3601 ctccaatttt ctcaatctta tgccctctac attgaatttc tttttacatt ctggacacat
     3661 tagtaaaggt gttaatttct ttgtagtttt cgcaggcttt gctaacttgg ggaatttttg
     3721 accgccatat cctttcttgt cctcggcgtg tcttctttca cctatggcag aacctcttct
     3781 ttttcctgct ttgtataggg agaccttttg cagtgtatgt ttcttacact ttggacagta
     3841 tcttctgatc tcctttggca tgttcataga agaaagcctt gttgaccgta atttaaacat
     3901 cgctttagcc aagtgagaga aaacttgatt caaagagtga ataatcaaca tagcaacagt
     3961 ttgctgctgt acttctcaaa atgttacata atgcagtgta tattttgata atagtatcta
     4021 ttccttaatg aaaatacttg tagttgacga taacaatgat atcaataagc tacttgcaaa
     4081 gtatttcgaa gcgaaaggac atgattgcat cgcgaccaag gatggatatg agggatttca
     4141 gctatgtgtc aacaacaagt ttgatgcgat aatattggat ttggcaatgc caggctttac
     4201 gggaaaggat tttcttgatt cacttgatca aagaggaata attaacaagc aaaaaataat
     4261 cgtgctaaca gcattgccac ttggtgacgt tacaatagag gatggacatc acggaatttg
     4321 tcaggtgttg caaaaacctt gccgtttaga ggatcttatg aaaaccctaa cgacattaac
     4381 tgctgtttca tagaccttgt ttctattaac caagtgtaat cctctgtttg gtctgtatta
     4441 aaaaatacac atcacttcta tttaatataa aaccattctt tcatttatat ggtaacactg
     4501 gtggattgct attatctttc aactaaggca aatattattt tggtaatgtg aaatgagaac
     4561 atttctacaa attgccatta tatcaatttc atttttctac attatggtag ctatcggatt
     4621 tgttttattg gttgaatcaa ataaactaga gctaattgga aagcttacta aagaaacaga
     4681 gattctattc aatggtaacc aacaactagt ctattttgac attttcgtgt taactgtagt
     4741 tataggtatc tttgtcttct ttgtagtccg ttctgtaaca aacccgctga gaaaactgcg
     4801 ctatgctgca gataaaattg cacgaggata tttggacgtt aagatcccca caagaggaac
     4861 ggacgaagtt cgtgacctag cacactcact tcaggctatg gtaaatgcaa ttcgaaaaga
     4921 aaaagcactt caatcagctg ctttacaaaa atacagaaac ctctatgaga cctcatcgaa
     4981 tttatatcgc acagtcaatc tagacggaat tataacaaat tgtaaccgat tgttcgccga
     5041 acgtttggga tatacagtat tggaagttat tgggactcat tataacaagt ataccgcccc
     5101 aaaagatgtt caaaccatga atgagtcatt taagaattgg aaagagaaag gttttctcaa
     5161 agatgttgaa atatggctca agagcaggga tgggaccatt tttcctacac ttattagtac
     5221 aagcaatctc tatgatgaaa atgacaatct gattggatgc aatgaagtta tacgagacat
     5281 ttcagaaatt tacgaagcaa gaaaaaaact ggaacaagac gcaatattgc agatacagct
     5341 ttacgaaact aaaaaggtgg acaaactaaa gaatgaattt tcttccatga tgacccatga
     5401 gttgaaaacc ccgcttgttc caataatggg caactgtgaa atgctcaaag aacctggttt
     5461 gcttggtgat cttaatcaag accaaacaga ttcagttgac atgatttatc aaaacgcggc
     5521 tagattggag aagttgatag gtgacatact actggcccag aggttagaaa ttggtcaaat
     5581 tacctatgat aaacaaagat ttagcgtaac gaaattgatg aatgagatag aggatgacta
     5641 ttcacaaatc atgaaagtaa aacaaatcaa atttgtaaat ttgacaccag aagatctaag
     5701 tttatggagt gacaagagta ggatcagaca agtaatcgat aatctgattc aaaatgcagt
     5761 ggattttaca ccacaaaatg atggaaggat agagatctgt gcaaagaatg aagacaacaa
     5821 gatcttcttc tctgtaaggg ataatggtat gggtattcca aaagaaatac aaccagttat
     5881 gtttaaaaaa ttctatcagg ttgacgcatc acatagaaga aaacatacgg ggacaggcct
     5941 tgggttggtg accagtaaag gtatagttga aggactaggt ggtgagattt ggtttgaaag
     6001 cgaacctggc aaaagtacga ttttttactt taacatccca caagaagtat tgtacaggaa
     6061 tcgaattgct taggaaagtg atattacaac atgttctggg tatgcgcgtg atcactccaa
     6121 aaaatcgtag cggtgagata atttcatgaa acttttgtta attgaagaca atcatgatgt
     6181 gtctaaaatg gtgtcacagt atctaaggtt aaagggatat gattgcatgg ttgctgataa
     6241 cggcaaagat ggactagacc aaattataaa tggaaaatat gatgttgtat tgttagattt
     6301 ggctatgcca gaatttagtg gttatgacgt catagcatct cttgaggcca agggaaaact
     6361 agtagatcag aaattgatta tacttactgt atatgctcta agtgatgaga agataaaagg
     6421 cctagaaagt agaggtgtgt atgcttgcat aaaaaaacca gttcaactac aggaacttgt
     6481 caaaaccatt caatcatgca cttcaagtca aaattaaaac cagtctgaag atagcacaac
     6541 tcgaataatt taacatcgct ttaatactgt aatctataat attctctcca tgaaagtaac
     6601 tccccttgct tcaatgattg actcactcaa ctcagtggct atgggtgaaa aaaaggcaga
     6661 tattgtttta aaaaattgta gactagtaaa tgtctattct agagaaatca tttcaca
//
LOCUS       DASPUS010000137         6824 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1023950, whole genome shotgun sequence.
ACCESSION   DASPUS010000137 DASPUS010000000
VERSION     DASPUS010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 6824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6824)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6824
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1023950"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="VEJ68_03120"
     CDS             <1..209
                     /locus_tag="VEJ68_03120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HXX05793.1"
                     /translation="ESLLAETKTYAKAIAKNSGYAVGVSKMLVNRGMDTNLDTGLKLE
                     IYSWSLCFSTKEREERMRLFLHRK"
     gene            complement(210..1127)
                     /locus_tag="VEJ68_03125"
     CDS             complement(210..1127)
                     /locus_tag="VEJ68_03125"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010191782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006566 - threonine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HXX05794.1"
                     /translation="MPSSVTVKAPCSTANLGPGFDVFGLALDAYYDEIQLRKEGKGIT
                     IQTFDSIPLNPKKNSAGLVIREMSKKFKIKTGLVLRIKKGVPAGYGMGSSAASAAAAA
                     VAFDSLFNLGLNQNTLVQYAGLGEKASAGSVHYDNVAASVLGGFVIVRTNPFDIIRID
                     PPKNLVLCIGIPKIPIPQKKTEISRKVLPHMVKLSDHVVNLANASAITAGFVKKDVDL
                     IGKSIKDIIVEPARQRLIPGFEKVKRNAIRAGALGVTISGAGPSVIAFTSKSGNLKKI
                     SNAMIDGFSSVRTECKIVICKPAKGTTVI"
     gene            complement(1128..1886)
                     /locus_tag="VEJ68_03130"
     CDS             complement(1128..1886)
                     /locus_tag="VEJ68_03130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HXX05795.1"
                     /translation="MKTVFIVGTAGSGKSLLASKIFEYYTRNGAFVGMLNLDPGVENL
                     PYTCDVDVRSYIDIVSIMRQYDLGPNGSMIMANDLIASKIDELQNAVDNVNPDYLIVD
                     TPGQIELFAYRASGPFLVQNLNSEQKVVMFLHDGSLITTPMNFVSIALLATSVKLRLN
                     LPQVNVITKIDLIEDKIKDVLKWSTNMSSLQDALAKESDGENYILASNLLRSLNLGGF
                     AQGSIPISNASGEGLANLQAALSRILNLGEEIED"
     gene            1946..2962
                     /locus_tag="VEJ68_03135"
     CDS             1946..2962
                     /locus_tag="VEJ68_03135"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HXX05796.1"
                     /translation="MNWKLLAIPVSIIPFLIIAFTFNVSLANILAVGMIPFTIAAFAM
                     ACKLFTQGLKFNYLVKKLLGPVDVNWRTISVRIGSEFVTSTTPSFVGGELVRIMWLNK
                     KGVPVGKASYVTIVEIVTEVLVSGILAISAAAFSFYYGAYAVAIAILAVSLPVTGVWS
                     TLFFLSAKRTFQVPSLIYNIAKKIGKGRSLQYLDKTNLWMKEICDMSRETKNNKQIKK
                     AFAVSMIISAFTWSFYGISFMVIANGAGYAIDFIHSLMATMAANAVGNLPVTIGGSGL
                     TEFTIWAYLGHLNTLAYDAAKNSMQWNIIIAWRIATYHVGLVISWLFLMKVVYPSIKK
                     AKTA"
     gene            2998..3786
                     /locus_tag="VEJ68_03140"
     CDS             2998..3786
                     /locus_tag="VEJ68_03140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HXX05797.1"
                     /translation="MNYSGKVVVITGASSGIGKEAAKEFAKLHASLALVSRDRNKLED
                     IAKELSKYKTEILICQCDVSQKEQVNKMSKEVLEKFATIDVLVNNAGFGIYNTIKDTK
                     IEEIESQMNTNYFGMVYCTKTFLPKMLENKSGHIVNVASVAASFGIPAMASYCASKFA
                     MLGFSESLYHELRGTGVGITVVSPIMVRTNFFNHNSFGKMPRYTMSLSANTVAKAVVR
                     ASSSPRLEIVVPQVIRIAIWMKQTFPYAINLIVGGIFRKSVKTN"
     gene            complement(3806..4198)
                     /locus_tag="VEJ68_03145"
     CDS             complement(3806..4198)
                     /locus_tag="VEJ68_03145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016940143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05798.1"
                     /translation="MAKEIPKWAQDEIKNAKFGKPESLTRTGYILEIYDKDKKVDAQL
                     YEAVEDGRRIVTMDLPKKTKPSDLMKGVVYEFTFNSTKAPLSDKVAEFLRKEMEIDMN
                     AIYQFELTNLELMDVDSDSSSPEESEEE"
     gene            complement(4216..4437)
                     /locus_tag="VEJ68_03150"
     CDS             complement(4216..4437)
                     /locus_tag="VEJ68_03150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05799.1"
                     /translation="MTECPECAAKQVQVEMKFDLNTKHFICKRCGLFATREQVSDIRY
                     RLNKREKTREDKHDEYREWWQSSKKEKQG"
     gene            complement(4582..5814)
                     /locus_tag="VEJ68_03155"
     CDS             complement(4582..5814)
                     /locus_tag="VEJ68_03155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HXX05800.1"
                     /translation="MKKIGGFINPWGTGHFTRMMALDSTIRENIKDELEIHYTSSGDI
                     YQKLLKKFPNKKENLHSITIPTPVDGKKGPSVSLSLFNFLVPVKGRPPLVSVMANYLR
                     NEGKLYDEQNFDLVINDGDIGSNVIAEKRNIKSVFITNQFRPRLWKSRSYFYPGLIYI
                     SKKIATASKIVVADAPPPYTICEYNLNFPEKLKDKVVYAGHFSNGVIVHRSHKSDLEK
                     LIEKSDSFGYWMITGNKSTNETTAKTYEKVFRRPEMNNEKRIVSHARNDPSLDKVTSK
                     DGKKYSISDALEKKVDWIQIDIGFLSEPEKDTVLSLCKYAVINGSHTAMGEILGGKAK
                     PIIGIPVYDEHTNQIKWAEQRKLGILATNIKNTVRAVSEIHDNYNKYEENLADFSRNY
                     VRNGTERTTEIISQMLEN"
     gene            complement(5846..>6824)
                     /locus_tag="VEJ68_03160"
     CDS             complement(5846..>6824)
                     /locus_tag="VEJ68_03160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine biosynthesis protein"
                     /protein_id="HXX05801.1"
                     /translation="EVTDPVLASSAIGLLFGVDRIAIAKEVEINFDSVVSTIIKTSRN
                     LLLKGEKFYVKVNGKTSGYLAKDLEVSATASLIEQTVDLQVMPGSESDHSKMLYTHIT
                     ESKAYVCIFVDKGLGGVPYNSQNAEILCCVYDELSAISCLQCIKMGFDVKILVCYSND
                     KDLLKISKMINRIIPSLIQEKIKLQFCKILRISNLLMKTLVITSITASVASRQKIPRV
                     ALTISPLVYPSWFIEENTKIISQKNLIPWTPLSGIDSSIIENAKEIGLEKYLTSLENL
                     SKLKFAKKSTDKERIIKNVKLALKNLKSVSITLGSKNVHDIIDSLKANH"
BASE COUNT         2043 a         1291 c         1168 g         2322 t
ORIGIN      
        1 ctgaatcttt gcttgctgaa accaaaacat atgcaaaagc catagcaaaa aacagtggct
       61 atgctgtagg tgtatcaaag atgttagtta atagaggaat ggatacaaat ctggatactg
      121 gtcttaaatt agagatatat tcatggtctc tttgtttttc gactaaggag agagaagaaa
      181 ggatgaggtt gtttcttcat cgcaagtaat cagataacag ttgttccttt agctggtttg
      241 catatcacaa tcttgcattc tgttctaact gatgaaaacc catctatcat tgcattggat
      301 atttttttta aatttcctga ttttgaagta aaagcaatta cagaaggtcc tgccccacta
      361 atggtaactc ctaaagcgcc tgcacgaatt gcatttcttt ttaccttttc aaaacccgga
      421 atcaggcgtt gcctagcagg ctctactatt atatctttta tcgatttacc tatgagatct
      481 acgtctttct taacaaagcc tgcagttatt gcagaagcat ttgctagatt gactacatga
      541 tctgataatt tgaccatatg tggaaggact ttccttgaaa tctcagtctt cttttgtggt
      601 ataggtattt ttggtatgcc tatacacaaa actaaattct tgggtgggtc aattctaatt
      661 atatcaaatg gatttgttct tacaatcaca aaccccccta agaccgatgc tgcaacgtta
      721 tcataatgga cagaaccagc acttgctttt tctcccaagc ctgcatattg cactaaagta
      781 ttttgattta atcccaaatt aaataatgaa tcaaacgcaa ctgctgctgc agcagctgac
      841 gctgcactac ttcccattcc atatccagca ggtactcctt tcttaattct tagaacaaga
      901 cctgttttta tcttaaactt ttttgacatt tctcttatta ccaaacctgc agaatttttt
      961 ttcggattaa gtggaattga atcaaaagtt tgaattgtaa ttccttttcc ttctttccta
     1021 agttgaattt catcataata tgcatctaag gctagtccaa atacatcaaa accaggtccc
     1081 agatttgccg tagaacaggg tgcctttact gtaacacttg aaggcaacta gtcctcaatc
     1141 tcctccccta aattgagaat tctgcttaaa gcagcttgaa gatttgctaa accctccccg
     1201 gaagcatttg aaatgggaat tgaaccttga gcaaatccac ctaaatttaa actcctcaga
     1261 agatttgatg ccagaatata gttttctcca tcagattctt ttgcaagtgc atcctgaagg
     1321 cttgacatgt ttgtggacca ttttagtaca tctttaatct tgtcctcaat cagatctatt
     1381 ttcgtaatca catttacctg aggcaggttt aacctgagtt tgacagacgt tgcaagtaaa
     1441 gctattgaaa caaaattcat cggtgtagta ataagtgaac catcatgaag aaacattact
     1501 actttttgct ctgaattgag attttgaaca agaaatggac cgcttgctcg ataagcaaac
     1561 aattcaatct gaccaggtgt gtctactatc aaatagtctg ggtttacatt atctacggcg
     1621 ttttgcaatt catctatctt tgatgcaatt agatcatttg ccatgatcat agaaccatta
     1681 gggccaagat catactgtct cattattgat acaatatcta tgtaacttct aacatccaca
     1741 tcacaagtat agggcagatt ctctactccg gggtctaaat ttaacatccc cacaaaagct
     1801 ccatttcttg tataatattc aaaaatctta gaggccagca atgattttcc agatcccgct
     1861 gtcccaacaa taaagactgt tttcattttt gttgattaac tattttatgt tgagcttata
     1921 tttccatcca tgaataagcc atgcaatgaa ttggaaactg ctcgcaattc cagtaagtat
     1981 aattccattt cttatcattg cctttacttt caatgtaagt ttagctaaca ttcttgcagt
     2041 cggaatgata ccttttacga ttgctgcatt tgcaatggct tgcaaactat ttacacaggg
     2101 attgaagttc aactatctcg taaagaaact tttagggcca gtagatgtga actggagaac
     2161 gatttcagtt agaattggta gtgagtttgt tacttctacc actccatctt ttgttggtgg
     2221 tgaattggta agaatcatgt ggttgaataa aaaaggagtt ccagtaggca aggcatcata
     2281 tgttacaata gtagaaattg taaccgaggt tttagtatca ggaatattag caattagcgc
     2341 agctgcattc tccttttact atggagcata tgctgttgcg attgcaattc ttgcggtaag
     2401 tttaccagtt acgggtgtat ggtcaacact atttttctta tcagccaaaa gaacttttca
     2461 agtgccatcg ctgatttaca acattgcaaa aaagatagga aaaggacgct cactccaata
     2521 tctagacaag acaaatctct ggatgaaaga aatttgtgat atgagcaggg agacaaaaaa
     2581 taacaagcag attaaaaaag cgtttgcggt ctcaatgata atttcagcat ttacttggtc
     2641 attttatgga atttctttta tggttattgc aaatggagcg gggtatgcca tagattttat
     2701 acattctctt atggcaacca tggcagcaaa tgcagtagga aacctacctg ttacaatagg
     2761 tggttcaggt ctaactgaat ttaccatctg ggcatatctg ggtcatctaa acacgttggc
     2821 atacgatgct gcaaaaaata gcatgcagtg gaatatcata attgcttgga ggattgcaac
     2881 atatcatgta gggctcgtaa ttagttggct atttttgatg aaggttgtgt atccaagtat
     2941 taagaaagca aagactgcat agaaagcact ttattttcac cattttacat tttcattatg
     3001 aattattcag gcaaagtagt tgtaataact ggtgcatcaa gcggaattgg taaggaagcg
     3061 gccaaagaat ttgcaaagtt acatgcttcc cttgcacttg tttcaagaga cagaaataaa
     3121 ctggaagata ttgcaaagga gctctcaaaa tacaaaactg agatcttaat ttgtcagtgc
     3181 gatgtatctc aaaaagaaca ggtaaataaa atgagtaagg aggttttaga gaagtttgca
     3241 actatcgatg ttcttgtaaa taatgcaggt tttgggatct ataataccat aaaagacaca
     3301 aaaattgagg aaatagaatc acaaatgaat acaaattatt ttggcatggt atattgcacc
     3361 aaaaccttct tacccaaaat gttagagaat aaatctggac atatagtcaa tgttgcatct
     3421 gtcgcggcaa gttttggaat tcccgcaatg gcatcatact gtgcttcaaa gtttgccatg
     3481 ttaggctttt cagaatcact gtatcatgaa ctgagaggga ctggtgtagg aattactgta
     3541 gtaagcccca ttatggtgag aactaatttc ttcaatcata actcatttgg aaaaatgcca
     3601 agatatacaa tgtcactaag tgcaaatacg gtagcaaaag ctgtagtaag ggcttcttcc
     3661 tctccacgac ttgagatcgt agttccgcaa gttatcagaa tagctatttg gatgaaacaa
     3721 acatttccat atgccatcaa tctcatagtt ggcggtattt ttagaaaatc ggtaaaaacc
     3781 aactaattga ttcagatatt gtatcctatt cttcctcaga ttcttctggt gaagaagaat
     3841 cagaatccac atccataagt tccagattag ttagttcgaa ttgatatatg gcattcatat
     3901 caatctccat ctcttttctg agaaattctg ccactttgtc actcaaagga gcctttgttg
     3961 aattgaatgt aaattcatag acaacgcctt tcatcaagtc agaaggcttg gtttttttag
     4021 gcaagtccat tgttacaatt cttctgccat cctcaacggc ttcataaagc tgggcatcaa
     4081 ccttcttatc cttgtcgtaa atctcaagta tgtatcctgt tcttgtcaac gattcgggct
     4141 tgccaaattt ggcgttcttt atttcatctt gtgcccactt tggaatttct tttgccatgt
     4201 ctatttacct gataactaac cttgtttttc tttcttactt gactgccacc attcacgata
     4261 ctcatcatgt ttgtcctcac gtgtcttttc acgtttgttt aatctatatc tgatatcgct
     4321 tacttgttct cttgttgcaa ataatccaca tcttttacaa atgaaatgtt ttgtgttcag
     4381 atcgaatttc atttctactt gtacttgttt ggctgcgcac tctggacact cagtcaatga
     4441 cggcgatcac atgagttatc cataaaagct tttgctagtt ctggtacgcg gtctatgtct
     4501 tcatccctat cggtcagttc gcccatcgaa aaatgccgcg taccagaatt tgaaaatata
     4561 ctgcaaaaat tataatcctt tctagttctc tagcatttga gaaattattt ctgttgttct
     4621 ctcggttcca tttctaacat agtttctaga aaagtccgcg aggttctcct catatttgtt
     4681 ataattatcg tgtatttctg aaactgccct cactgtattt ttgatatttg tagcaagaat
     4741 tcctagtttt cgctgctcag cccattttat ctgattagta tgttcatcat aaacaggaat
     4801 accaatgatg ggttttgctt ttccacccaa tatctcgccc atggcagtat gcgaaccgtt
     4861 tatcacggca tatttacaca gactcaagac agtgtctttt tctggttctg ataaaaatcc
     4921 tatatcaatc tgtatccaat caactttctt ttctagtgcg tcagaaatag aatatttttt
     4981 accatcttta cttgtcacct tgtctagaga gggatcattt cttgcatgcg aaactatcct
     5041 tttctcatta ttcatttcag gcctgcgaaa taccttctca tatgtcttgg cagtagtctc
     5101 atttgtggat ttgttgccag ttatcatcca atatccaaaa ctatcactct tttcaatcaa
     5161 cttttcaaga tctgacttgt gagaacgatg aactataaca ccatttgaaa aatgacctgc
     5221 gtataccacc ttatctttca atttttcagg aaagtttagg ttgtattcac atatggtata
     5281 tggggggggc gcgtctgcaa caactatctt tgaagccgtg gcaattttct ttgatatgta
     5341 tatcaatccc ggataaaaat aagatcttga tttccataga cgtggtctga actgatttgt
     5401 aataaaaaca gatttgatat ttcgtttttc tgcaattaca tttgaaccaa tatcgccatc
     5461 attgataaca agatcaaagt tttgttcatc atacaactta ccctcatttc ttagatagtt
     5521 agccatgacg gaaacaagag gtggtcttcc ttttacaggt actagaaaat taaataacga
     5581 taatgaaaca ctcgggcctt ttttaccatc aactggagta ggtattgtta tactatgcaa
     5641 attttctttt ttattaggaa attttttgag aagtttttga tatatatcgc cactgcttgt
     5701 atagtgaatt tcaagttcat ctttgatatt ttcacggatt gtggaatcta gagccatcat
     5761 acgggtaaag tgaccagttc cccatggatt gatgaatccg cctatcttct tcatatctgc
     5821 aaataattag tgcccactta aaatctcaat gattagcttt caacgagtca attatatcat
     5881 gtacattttt tgaacccaat gtaattgata cactcttaag atttttaaga gcaagtttca
     5941 cattcttgat gattctctct ttgtcagtag actttttggc aaattttaat ttagataaat
     6001 tttctaaact tgtaagatat ttctcaagtc ctatctcctt tgcattttcg ataatactag
     6061 aatctattcc tgaaagagga gtccatggta tcaaattctt ttgagagata atttttgtat
     6121 tttcttcaat aaaccaagag ggatatacta atggcgatat tgttaaggca actcgaggaa
     6181 ttttctgcct tgatgctact gatgcagtaa tagatgtaat cactagagtt ttcattaata
     6241 aattagagat tcttaatatt ttacaaaatt ggagtttaat tttttcttgt atcaaggagg
     6301 gaattatcct atttatcatc ttagatattt tgagaaggtc tttatcattt gaataacata
     6361 caagtatctt tacatcaaat cccattttaa tacattgtag acacgaaatg gcagatagct
     6421 catcgtatac acaacaaaga atctctgcat tttgagagtt gtagggtacg cctcctaatc
     6481 ccttgtccac aaagatgcaa acgtatgcct ttgattcagt gatatgtgtg taaagcatct
     6541 tactatgatc agattctgaa cctggcatca cttgtaaatc cacagtctgc tcaatgagtg
     6601 aagctgtcgc tgatacttcc aaatcttttg caagataacc agatgttttt ccatttactt
     6661 tgacataaaa tttttctcct ttcaataata gatttctgct tgttttgata attgtagaaa
     6721 ctacgctatc aaaattgatc tctacctctt ttgcaatagc tattctatca acaccaaata
     6781 acaatccaat tgcagacgag gccagaacag gatcagtcac ttct
//
LOCUS       DASPUS010000138         3304 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1571769, whole genome shotgun sequence.
ACCESSION   DASPUS010000138 DASPUS010000000
VERSION     DASPUS010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3304)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3304
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1571769"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..654
                     /locus_tag="VEJ68_03165"
     CDS             <1..654
                     /locus_tag="VEJ68_03165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HXX05802.1"
                     /translation="LKTTKLDLTITLGGDGTTLRTFRYLENEVPNLAINVGGNRGILS
                     EITLPQIDTAIDQILSNNIFLDRRTRVVASCGGEEYPPALNEIYINRQNLTKTSLFEI
                     RFQNDTVTQKMDGVIVATPSGSTGHSYSLGGPILHESLDVLIITPVAPVNKLPSIVVP
                     DEKIEIISNHDSNIIMDAQVIKPARFDEVITIRKYKKQAIFVRLKKQGLRQMSKLGF"
     gene            644..1117
                     /locus_tag="VEJ68_03170"
     CDS             644..1117
                     /locus_tag="VEJ68_03170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide-binding protein"
                     /protein_id="HXX05803.1"
                     /translation="MASKVLDATSFYAGIPFSSQESSFTTPLVFEEIKHIKKEQAAIS
                     ALIESKRLQIIEPEKKFSDIVQQKAKETGDFHKLSEEDISVLALCLQLSGELITDDFA
                     ISNVAKHLNLPVLPIMTKGVVKTNWTYFCSGCEKSFSKLSVCPICGNRLRRRRIF"
     gene            complement(1114..1800)
                     /locus_tag="VEJ68_03175"
     CDS             complement(1114..1800)
                     /locus_tag="VEJ68_03175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ERCC4 domain-containing protein"
                     /protein_id="HXX05804.1"
                     /translation="MKIEDLRIVVDERERKSGIPDLLKGIGVKVELKNLPIGDYIVAS
                     ETVVERKSIYDFISSVFDGRLFDQCNRLKEHYDNPAIIIEGNIDEIDKITENPLVFYG
                     AISSVVLDFKIPVIPTPNASSTAKLLVAMCARQGQMKGPFLKKIKKSGNINNQQLSIL
                     CSLPGVGEKLATRMLEKFGSPNNSLNASVADLAKIQGMGDARAQKIRKILDAKTRSDK
                     KTGQKTLHDL"
     gene            complement(1827..2219)
                     /locus_tag="VEJ68_03180"
     CDS             complement(1827..2219)
                     /locus_tag="VEJ68_03180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prefoldin subunit beta"
                     /protein_id="HXX05805.1"
                     /translation="MSSGEQQIPPWLQEQVSRMQQLQQNLQSISMQKQHLESEHLDTE
                     RALETLKKAADEDAVYKAAGSILIKSTKASLISELEEKKELANTRLTVLSKQEVRVKE
                     NLKEAETKIREMLRGPPQTGQQKTDTPK"
     gene            complement(2242..2484)
                     /locus_tag="VEJ68_03185"
     CDS             complement(2242..2484)
                     /locus_tag="VEJ68_03185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010192381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KEOPS complex subunit Pcc1"
                     /protein_id="HXX05806.1"
                     /translation="MSNYNTRIQISAGKRTKAIFKSLEIDNKFYDENPTKTEMSCDKD
                     IDILIDAQEISHLRANLNSTLRLVQASNDSLESVKI"
     gene            complement(2471..2686)
                     /locus_tag="VEJ68_03190"
     CDS             complement(2471..2686)
                     /locus_tag="VEJ68_03190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008301376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L37"
                     /protein_id="HXX05807.1"
                     /translation="MAKGKGASLKGLGQKYGLKPRKKFTAVHRLLKMKRKCPDCGSGR
                     FGREAVGIWACKKCGFKVAGMAYDVKL"
     gene            complement(2688..>3304)
                     /locus_tag="VEJ68_03195"
     CDS             complement(2688..>3304)
                     /locus_tag="VEJ68_03195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="exosome complex component Rrp42"
                     /protein_id="HXX05808.1"
                     /translation="IQPDKPFPDLGDKGILICTAEILPLADPHVEPGPPNEEVIELAR
                     VVDRGIRETEMIDLHQLVLIENKSVIGLFIDSSVIDADGNLFDACSYASVAAILSCTV
                     PKYEIKDEVPVLVEGVTSKPPIKTIPVSVTMARIGDYIVVDPTKEEQACMDARITITT
                     NSDGNICALQKGGDNGFTVDQLLQCSQTALAVGTKIRNQFKQLM"
BASE COUNT          926 a          641 c          602 g         1135 t
ORIGIN      
        1 ctcaagacaa caaagcttga ccttactatt actcttggcg gagacggaac aactttacgt
       61 acattcagat atttggaaaa tgaagttcca aatttagcaa tcaacgtagg tggcaacagg
      121 ggaatattat cggagataac cttgccacaa attgatactg caatagacca aattttatca
      181 aataatattt ttcttgatag acgaacccgg gttgttgcat cttgtggagg agaggaatat
      241 cctccggcac tcaatgaaat atacatcaac agacagaact tgacaaagac ctcgcttttt
      301 gagataagat tccaaaatga tactgtaact caaaaaatgg atggagtgat agttgcaaca
      361 ccaagtggct ccactggaca ttcatattct ttgggaggcc ccatactcca tgaaagtttg
      421 gatgtcttaa taataacacc tgtagcacca gtcaacaagt tgccttcaat tgtagttcct
      481 gatgagaaaa ttgagataat aagcaatcat gattcaaaca taatcatgga tgcgcaagta
      541 atcaagccag caagatttga cgaagtcatt acaatcagaa aatacaaaaa acaagcaatc
      601 tttgttagac tcaaaaaaca gggtctaaga cagatgagca agcttggctt ctaaagtatt
      661 ggatgccact tctttctatg ctggcattcc gttttcatca caggaatcaa gttttaccac
      721 gccacttgtc tttgaagaaa tcaagcatat caaaaaagaa caagccgcaa tatcagcatt
      781 aattgaatca aaaaggctcc aaataattga gccagaaaaa aaatttagtg acatagtgca
      841 gcaaaaagca aaagaaacag gcgattttca caaactttct gaggaagata tatccgtact
      901 tgcattatgt ttgcagcttt ctggagagtt gataactgat gattttgcaa tatcaaatgt
      961 ggcaaagcac ctcaatctac ctgtcttgcc catcatgacc aagggagtag ttaaaactaa
     1021 ctggacttat ttttgttctg gatgtgaaaa atcattttca aaactctctg tttgtcctat
     1081 ttgtggcaac agattgagac gaagacgaat attttaaaga tcatgtaagg ttttctgacc
     1141 agttttttta tcacttctag tcttggcatc aagtattttt cttatttttt gagcccttgc
     1201 atctcccata ccttgtatct ttgcaagatc tgcaacagat gcattcaatg agttgtttgg
     1261 tgaaccaaat ttttccaaca ttcttgtagc tagtttttct ccaacacctg ggaggctgca
     1321 caatatagaa agttgttgat tatttatgtt tccagatttt tttatttttt tgaggaatgg
     1381 tcctttcatc tgaccttgtc ttgcacacat tgcaaccaac aatttcgccg tactcgaggc
     1441 atttggtgtt gggatcacgg gtatcttaaa atccaataca actgaggaga ttgccccata
     1501 gaagactaaa ggattttcag tgatcttatc aatttcatct atgtttcctt cgatgattat
     1561 tgcaggatta tcatagtgtt cctttaacct attacattga tcaaacagtc gtccatcaaa
     1621 tacagacgat ataaaatcat agatactctt tctttctaca accgtctctg aggctacgat
     1681 gtaatcacca attggaagat tttttagttc tacttttact ccaattcctt ttagaagatc
     1741 tggaattcca ctctttcgct ccctttcatc cactactatt ctcaagtctt ctattttcat
     1801 tgattcgcta aaattttact agtattttat ttaggagtat ctgtcttttg ttgcccagtt
     1861 tgaggaggac cacgtaacat ttctcttatc tttgtctcag cttctttgag attctctttt
     1921 actcgaacct cttgttttga caatacagtt aagcgtgtgt tagctaattc ttttttttct
     1981 tctagttctg agatgagact tgcctttgtt gatttgatta atatcgagcc ggctgccttg
     2041 taaacggcgt cttcatcggc tgcttttttt agagtctcaa gtgctctttc agtatcgaga
     2101 tgttctgatt caagatgttg tttttgcatg gagattgatt gtagattctg ctgtaattgc
     2161 tgcattctag atacttgttc ttgcagccac ggcggaattt gttgttctcc agaggacatg
     2221 tttgtcccat ctttgttttg cttatatttt taccgattcc agagaatcat tacttgcctg
     2281 aaccagtcgt agtgtagagt tgagatttgc tcgaagatgt gaaatttctt gggcatcaat
     2341 cagaatatcg atgtctttat cacaggacat ttctgtttta gtgggatttt catcatagaa
     2401 tttgttgtca atttcaagtg atttgaaaat tgctttggtt cttttgccag ctgagatttg
     2461 aatcctagtg ttatagtttg acatcgtatg ccatgcctgc caccttaaaa ccacattttt
     2521 tgcaagccca tattcctact gcttctctac caaatctgcc agagccgcag tctggacact
     2581 ttcgtttcat tttcaatagt ctgtgtacag ccgtaaattt tttgcgtggt tttaatccat
     2641 atttttgacc taggcccttc aatgaggccc ctttaccttt agccatctta catcagttgc
     2701 ttgaattggt tccttatttt tgttcccaca gcaagtgctg tttgtgaaca ttgtaaaagt
     2761 tggtcaacag taaagccatt atctccacct ttttgtaaag cacagatgtt tccgtcagaa
     2821 ttagtggtta tggtaattct ggcatccatg catgcttgtt cttcttttgt tggatcaaca
     2881 acaatgtaat ctccaattct ggccattgta actgaaactg gaatggtttt gattgggggt
     2941 ttagatgtaa cgccttccac tagaacgggg acttcatctt ttatttcata ttttggaacg
     3001 gtacaagaaa gaattgcagc tacagatgca tatgaacatg catcaaatag atttccgtca
     3061 gcatcaatca cgctactatc tatgaataat ccgataactg atttgttctc tattaggaca
     3121 agttgatgga gatcaatcat ttctgtttcg cgtattcctc tgtctactac tcttgcaagt
     3181 tcaattactt cttcgttagg aggaccaggt tctacgtgcg gatctgctaa aggtaaaatt
     3241 tctgcagtac aaatgaggat tcccttgtct cctagatcag gaaatggttt atctggttgt
     3301 attt
//
LOCUS       DASPUS010000139         3589 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1993047, whole genome shotgun sequence.
ACCESSION   DASPUS010000139 DASPUS010000000
VERSION     DASPUS010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3589)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3589
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1993047"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(278..448)
                     /locus_tag="VEJ68_03200"
     CDS             complement(278..448)
                     /locus_tag="VEJ68_03200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05809.1"
                     /translation="MTEGIQKLAVPARCTTYGCKFNGVILILRESPKESSVKKEECPT
                     CHSIGCLELIRI"
     gene            complement(522..836)
                     /locus_tag="VEJ68_03205"
     CDS             complement(522..836)
                     /locus_tag="VEJ68_03205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05810.1"
                     /translation="MATPLRNTVYEIIKNAGSLTDSELSKALIKAGIAIPEDEFNKTL
                     LNLEIYGLVKVTWLTKDERRVEIVEKTQEEDEIEKQAQENLEKEYEAGFPGVEQQQDI
                     SE"
     gene            complement(842..3010)
                     /locus_tag="VEJ68_03210"
     CDS             complement(842..3010)
                     /locus_tag="VEJ68_03210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDC48 family AAA ATPase"
                     /protein_id="HXX05811.1"
                     /translation="MVKKDELLQMRVGEAKQRDVGKRRARIEPEAMEFLKVEPGDMIE
                     IGGKRSSCAIVWPADDDNKAPDMIRIDGQTRKNVGVGINDLVNVRKIVAKPAKSVVLM
                     PVNGNVTVDKEFTDFVKNRLKGLPLSEGDEISVMILGNSMDFKIHKISPKGVVKIERS
                     TTLTILTETSVDKKIRVTYEEIGGLRAQINRMREIVELPLKHPEVFTRLNIEPHSGIL
                     LYGPPGCGKTLIAKVLASESEANFYSINGPEIMNKYYGETEARLRDIFKEAKDNAPSV
                     VFIDEIDAIAPKREEAYGDVEKRVVAQLLALMDGLTDRGNVIVLGATNRPESVDPALR
                     RPGRFDREIEISVPNQDGRLEILQIHTRGMPLEDVDLKTLSAELHGYTGADIKSLCRE
                     AAMKALRDYLPEIESETEKISPEVLQSMKIRLPDFFEAMHEIVPTAMREFYVESPKVW
                     WKDVGGLDDAKRTLNDNLITAIKEPAKFQKMGIKPPKGALLYGPPGCGKTLLARALAT
                     ESGANMIFVRGPEILSKWVGESEKAIREIFRKAKASSPCIIIFDELDSLARSKSLEDG
                     GIGERLLSQLLTEMEDGGASRVIVVGISNRPDLIDPSLLRPGRLDLILFIPPPDDKGR
                     FEIIKLLSRQMPLAGDVDLKEIALATKGYTGADLVAVCRESAVRAMKNDIVKIGSVDF
                     AAALKIIKPSITKGVEDWYSSIKDNISYAIPKPIDKAFYG"
     gene            complement(3019..3300)
                     /locus_tag="VEJ68_03215"
     CDS             complement(3019..3300)
                     /locus_tag="VEJ68_03215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 1-beta"
                     /protein_id="HXX05812.1"
                     /translation="MVKLSLRAKILPSDTEVNLDEIIKKIGVSLKDEITLVKYTKEPL
                     AFGLYFINAEFSLEDKEGQMDSLENAVRAVQGVGEFEVLGISRTSVSAK"
     gene            complement(3304..3483)
                     /locus_tag="VEJ68_03220"
     CDS             complement(3304..3483)
                     /locus_tag="VEJ68_03220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc finger domain-containing protein"
                     /protein_id="HXX05813.1"
                     /translation="MSSSIALPVCSSCHRPIMPNDKCVKFNCPNCGSVLLWRCESCRE
                     AARVYKCKSCNFEGP"
BASE COUNT          913 a          771 c          596 g         1309 t
ORIGIN      
        1 catcactgtt gaagcaaata ttacaacagc aattataatt gcaatcttga cagatttact
       61 gattgttttt tcttgtgaca ttttttgtca attttgtatt gtttgctaag attataactt
      121 ttgattaaat tgaaatttaa cttaactata ttgtaaataa ttgtagaaac atcatctttg
      181 ttcaataaat tttacattga gaaagttttt gccaaaaatg ttgaattatt gaaatttgat
      241 tgaatgtgtt acaatttatc aacaaaattg aattgtacta tattcgaatt aattctaaac
      301 aacctatgga atgacacgtg gggcattctt ctttctttac acttgattct tttggactct
      361 ctcttagaat aaggatgact ccgttgaatt tacaaccata tgtggtgcat cttgctggca
      421 cagctaattt ttgaatccct tctgtcatgg ttttatgaga acactacgta atataagatc
      481 attctgccaa tgttgggaac gattttgtaa tttgtgatta attattctga aatatcttgt
      541 tgttgttcta ctccaggaaa tcctgcttcg tattcttttt ctaaattctc ctgggcctgt
      601 ttttcgattt cgtcttcttc ctgtgttttc tcaactatct ctactctacg ttcatctttt
      661 gtaagccagg tcacttttac cagcccatag atttctagat tcaacaatgt tttgttgaat
      721 tcatcctctg gaatggcaat tcctgctttt atcaaggctt ttgaaagttc agaatctgta
      781 agtgagccgg cattttttat gatttcatat actgtgtttc tgagtggtgt tgccatgtta
      841 tctatccgta aaaggccttg tcaattggtt tgggtattgc atatgaaata ttgtccttta
      901 ttgacgaata ccaatcttct actccttttg ttattgaggg ttttattatc ttcagtgcgg
      961 ctgcaaaatc tacgctaccg atttttacaa tatcattttt catggcacga acggcagact
     1021 ctctgcagac tgctaccaaa tctgctccgg tatatccctt ggttgcaagc gcgatttctt
     1081 tcaaatccac atctcctgca aggggcattt gacgactcaa aagtttgatt atctcaaatc
     1141 ttcccttgtc atcaggtggt gggatgaaaa gtatcagatc tagtcttcct ggccttagca
     1201 atgaagggtc aattaggtct ggcctgtttg aaatgccaac tactattact cttgaggctc
     1261 ccccatcttc catctctgta agtaactgac taagcaacct ctcaccaatc cctccatctt
     1321 caagtgactt ggatcttgcc aaagagtcca gttcatcaaa aattataata catggagatg
     1381 atgctttggc ctttctgaaa atctccctta ttgctttttc tgattcgccc acccattttg
     1441 acaaaatctc aggacctctt acaaaaatca tgtttgcgcc gctttcagtt gcaagagctc
     1501 ttgcaagtaa agtcttaccg catcctggcg gtccataaag caaggccccc ttgggaggtt
     1561 taattcccat tttctgaaac tttgctggtt cttttattgc tgtgatcaaa ttatcattta
     1621 gtgttctttt tgcatcatct aaaccgccta catctttcca ccatactttg ggactttcca
     1681 cgtagaactc tctcatggca gtaggaacta tctcatgcat tgcttcaaaa aagtctggaa
     1741 ggcgaatctt cattgattgt aatacttctg gagaaatttt ttctgtttct gattctatct
     1801 ctggcaaata atctctaaga gctttcatcg ctgcctctct gcaaagagat ttgatgtctg
     1861 caccagtgta tccgtggagt tctgcagata gtgtttttag atcaacatct tctaatggca
     1921 tgccccttgt gtgtatttga agaatctcta gtctaccatc ttgattggga actgaaatct
     1981 ctatctctct atcaaatctt ccaggtcttc ttagtgcggg gtctacactt tcaggtctgt
     2041 ttgttgcgcc taaaacaata acgttgcctc tatcagtaag accgtccatt aaagctaaaa
     2101 gctgtgcaac tactcttttt tcgacatcac cgtaagcttc ttcccttttt ggggctattg
     2161 catcgatttc atcaatgaat acaacacttg gtgcattgtc ttttgcctct ttgaaaatat
     2221 cacgcagtct tgcttcagtc tctccataat acttgttcat tatctcaggg ccatttatgg
     2281 agtaaaagtt tgcttctgat tcactagcaa gtactttggc aattagcgtc ttaccacacc
     2341 ctggtggtcc gtataagaga attccactgt ggggctctat attcaatcgt gtaaatactt
     2401 cgggatgctt tagaggcaat tctacaatct ctctcattct attgatctga gctcgtagac
     2461 cacctatctc ctcataggtt actcttattt tcttatcaac agatgtttca gttaaaattg
     2521 taagtgtagt acttcgttca atcttgacta ctccctttgg tgatatcttg tgtatcttaa
     2581 agtccatcga attgccaaga atcataactg atatttcgtc tccttcagaa agtggaagac
     2641 ctttgagtct gttttttaca aaatcagtaa attccttatc cactgttaca tttccattaa
     2701 ctggcatcaa gacaacgctc tttgcaggtt ttgcaactat ctttctaaca ttgacaagat
     2761 cgtttatccc aacaccgaca ttttttcttg tttgaccatc tatgcgtatc atatccggtg
     2821 ccttgttatc atcatcagca ggccatacga ttgcacagct agatcttttt cctccaattt
     2881 ctatcatatc gcctggttca actttgagaa attccattgc ttctggttct attctagctc
     2941 gtctttttcc tacgtctctt tgctttgctt caccgacgcg catttggagt agctcgtctt
     3001 tttttaccaa gattacacct actttgcact aacggaagtt cgacttattc ctaagacttc
     3061 gaactctcct actccttgga ctgcacgtac tgcattttca agagaatcca tttgtccttc
     3121 cttgtcttct agcgaaaatt ctgcattaat aaagtagaga ccaaaagcaa gtggctcttt
     3181 agtgtatttt actaatgtaa tctcatcctt tagagacact ccgatctttt ttatgatttc
     3241 atctaggttg acttctgtgt cagagggtaa aatttttgcc cgtaatgaga gttttaccat
     3301 ttcttatggt ccttcaaaat tgcaagattt acacttgtac actcttgccg cctctctgca
     3361 actttcacat ctccaaagca gtacggaacc acagttggga caattgaact ttacacattt
     3421 atcattaggc attattggtc tgtggcatga actgcacact ggtagagcaa ttgatgacga
     3481 catgacacaa gctgaatttt taccgaattt atatcttgct tatcaattat gtgttctctc
     3541 aagttaagat ccgtctcaac tcatttccca aaatggattg aattgctct
//
LOCUS       DASPUS010000140         2677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_624943, whole genome shotgun sequence.
ACCESSION   DASPUS010000140 DASPUS010000000
VERSION     DASPUS010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2677)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2677
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_624943"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..332
                     /locus_tag="VEJ68_03225"
     CDS             <1..332
                     /locus_tag="VEJ68_03225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HXX05814.1"
                     /translation="KIATVTRGGLIPARLVADKFDIKVILVDKKKIPEKTLFVDDIYD
                     TGSTFNKILPKVIHPEKFLYATLVARKGMSYPKHLVFGQRTKGKEYVVFPWDALEHER
                     KKKSLKP"
     gene            513..953
                     /locus_tag="VEJ68_03230"
     CDS             513..953
                     /locus_tag="VEJ68_03230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05815.1"
                     /translation="MAFGGDVDTLNLLFDKLQYIFSGYGTIRESFLEVNSLYKQGKIS
                     NKEFFEKIHESINRFSALEFLLVKAMFEIKKTLDKSSGKPGKPATPTVNQTPDNSLAS
                     FIMAKNLPKPDVNVFEGDVKTCARCSMVMKKISKFCTYCGNKVQ"
     gene            1096..1485
                     /locus_tag="VEJ68_03235"
     CDS             1096..1485
                     /locus_tag="VEJ68_03235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010191849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CrcB family protein"
                     /protein_id="HXX05816.1"
                     /translation="MKGIELGFLAIGGVLGTFLRYRIALSPLILGTLSVNVLIINIIG
                     SFILGIFVVLSQQWSLDTKYTLLVAIGFCGSLTTMSSFALETSNLIDNKLYSLVAINI
                     VANVGLSLSAIFGGKTLMSVIMSGGLR"
     gene            1486..1800
                     /locus_tag="VEJ68_03240"
     CDS             1486..1800
                     /locus_tag="VEJ68_03240"
                     /inference="COORDINATES: protein motif:HMM:NF014677.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF190 domain-containing protein"
                     /protein_id="HXX05817.1"
                     /translation="MRTMKMWCMTIRIKKNDNVKGKRVHNVILDLLKKGKISGATVWT
                     GVAGFGKRGKSNFEIEGISVNMPLLIEVIDELTKLEAILPDIKEVIGDNGLVTLHEIG
                     VV"
     gene            complement(1980..2657)
                     /locus_tag="VEJ68_03245"
     CDS             complement(1980..2657)
                     /locus_tag="VEJ68_03245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05818.1"
                     /translation="MKNQATILISVIVIAIGTSAVLWFVFSSETSNNAKQQFPQLSNI
                     TQASNITEQITYSIPPDDPTKPIPQYYENVGIEQSCGVYMKSINGTYATCPMYNSSTS
                     GIGYLREPIFRYLDFGASNYPPPGGFRLVNSQPDLLTPEQIEKVLYVIKNDPQIKSQP
                     FDWKVFGMGYYPMNYSWYNDVRLVIHGIRDSDNTFCRWDATVTVNLNTLTVVQKENTD
                     IKSYTKC"
BASE COUNT          919 a          437 c          507 g          814 t
ORIGIN      
        1 acaaaattgc tacagtgaca agaggcggat tgataccagc aagactggtt gccgataaat
       61 tcgacatcaa agtaatactt gtcgacaaaa agaaaatacc tgaaaaaact ctctttgtag
      121 atgacattta tgatactgga agcacattca acaagatttt accaaaggta atccatccag
      181 agaagttttt gtatgctaca cttgttgctc gtaaaggcat gtcatatcca aagcatttag
      241 tctttggcca acgtacaaaa ggaaaagagt atgttgtatt tccatgggat gcgcttgaac
      301 atgaacgaaa gaaaaaatca ctgaaacctt aagaatcggt tgatcaaatt tatgatatga
      361 atccctttgc atgttcaaag tgtttcgtag gatataggcc aggagagtta ctccagtgta
      421 ccacatgtgg tcaagaattc tgtggtacgt gttttaaaga tcacaaacac tgatgccaaa
      481 aataattaat gagtaaacgg tagatatggc aaatggcttt tggcggtgat gtagacacac
      541 taaatctgtt atttgataaa cttcagtata ttttcagcgg ctatggtacc attcgcgagt
      601 cttttcttga ggtcaactct ctatacaaac aaggcaagat ctcaaacaag gaattctttg
      661 agaagattca tgaaagcatc aatcgattct ctgcattgga gttcttacta gtcaaagcaa
      721 tgttcgaaat aaaaaagact ttagataaat ccagtggcaa accaggtaaa cctgcgactc
      781 caactgtgaa tcaaactcct gataattcgc ttgcttcatt tatcatggca aaaaatctac
      841 caaaacctga tgttaatgta tttgaaggcg atgtaaagac ttgcgcacgt tgcagtatgg
      901 ttatgaaaaa aatatccaaa ttctgtactt attgtggtaa taaggtacaa taaataacca
      961 aaaatttaaa agatgtatta ttcaaaatgt atgctaggct atgacattag ccgtggtgta
     1021 aaaaccagaa ccgtgtcctt gtgactctga taatgtctac cacaaaaaat ggagatagat
     1081 taggtagaca caaaaatgaa aggaatagaa ttaggatttc ttgcaatagg cggagtatta
     1141 ggaacttttc tacgctatag aatagcactc tctccattaa ttcttggtac tctatctgta
     1201 aatgtattaa tcatcaacat cataggtagt tttattctcg gaatatttgt tgtattgtca
     1261 caacagtgga gccttgatac aaaatacaca ttgctagtag caataggatt ttgtggttct
     1321 ctgacaacaa tgtcttcatt tgcattagag acaagtaact tgattgacaa caaattatat
     1381 tcacttgtag caatcaatat agtagcaaat gttggtttat cattaagtgc aatatttggt
     1441 ggtaaaacct tgatgagtgt gataatgagt ggaggattac gataaatgag aaccatgaag
     1501 atgtggtgca tgaccatcag aattaaaaaa aatgacaatg taaaaggcaa acgtgttcat
     1561 aacgtgatac ttgatctatt aaagaaagga aaaatttctg gtgccactgt atggacaggc
     1621 gtggcaggat ttggcaaacg tggaaaatca aattttgaaa tagaaggaat atccgtcaac
     1681 atgcctttac tcatagaagt aattgatgaa ctgacaaaac ttgaagcaat acttcccgat
     1741 atcaaagaag tgattggaga taatggtctt gtcactttac atgaaattgg cgtagtctaa
     1801 ctaaatatgt taattcatag tggatcggaa gggaaacacg accatatagt tcatttttag
     1861 gatccagaag actatacgtc cgaatgagtt tatcgataaa gagtaaaaaa tagaacgccc
     1921 ccgttttgaa gcgggaaaca tgtgctttgt cgtaaaactt tagaagttaa gatttcaaat
     1981 taacatttag tatatgattt aatatctgta ttttccttct gtacaacagt caaagtatta
     2041 agattaactg tcactgttgc atcccaacga caaaatgtat tatctgaatc tcttattcca
     2101 tgtattacaa gtcgaacgtc attataccat gaataattca ttggataata acccattcca
     2161 aataccttcc aatcaaatgg ttgggatttg atttgaggat catttttgat aacgtataac
     2221 accttctcta tttgttctgg agttaaaaga tctggttgtg aattcactag gcgaaatcct
     2281 cccggtggag gataattact ggctccaaag tccaaatatc tgaaaatagg ttcacgcaag
     2341 taaccaatcc cacttgtact tgaattgtac attggacaag ttgcataagt cccgtttatt
     2401 gatttcatat atacaccaca agattgctca atgcccacat tttcataata ctggggaatg
     2461 ggttttgttg gatcatctgg cggtatagaa taagttattt gttcagtaat attggatgcc
     2521 tgcgttatat tagataattg tggaaattgc tgttttgcat tattactagt ttcagaagag
     2581 aaaacaaacc ataaaaccgc agacgtacca attgctatga caataacact gataagaatt
     2641 gtagcttgat ttttcatcaa gtccatctat ggttttc
//
LOCUS       DASPUS010000141         2623 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_216363, whole genome shotgun sequence.
ACCESSION   DASPUS010000141 DASPUS010000000
VERSION     DASPUS010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2623)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2623
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216363"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..451
                     /gene="cysC"
                     /locus_tag="VEJ68_03250"
     CDS             <1..451
                     /gene="cysC"
                     /locus_tag="VEJ68_03250"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013483114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004020 - adenylylsulfate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HXX05819.1"
                     /translation="LQEYVPNLAVLDGDELREWLSPKDFSKEGRDEHNKKVAHLAKLL
                     VKHNVPVAVSLISPFKENREAARKIIGEGTFMETYVKCPLDICEGRDVKGMYKKARNN
                     EIKNFTGLQDPYEEPTNPEILINTDQETLETSAKKVLSILKNSGHFK"
     gene            485..1021
                     /locus_tag="VEJ68_03255"
     CDS             485..1021
                     /locus_tag="VEJ68_03255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05820.1"
                     /translation="MKIVAIGSTLLDIEIGCSNTLQKFVKLGHSVSLVIPRDKHWKEN
                     QKIEQDDIGTKLKISNIYRVENFDYSKITQLNVNLINSLIGRIKPSVAIIPFINNSDK
                     MKKILAKSAILACRNVETILMYENSKNSNFLPNVYLVTNNKRPHYLQKIYANKLGISQ
                     PVEAFESQRLILLQNDLF"
     gene            1098..1718
                     /locus_tag="VEJ68_03260"
     CDS             1098..1718
                     /locus_tag="VEJ68_03260"
                     /inference="COORDINATES: protein motif:HMM:NF014625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L deacetylase family protein"
                     /protein_id="HXX05821.1"
                     /translation="MKIVSIGAHPDDIELGSGGTLAKHKARGDVTHVILCTLGGVCGD
                     PKQREREASEATRILGVKKLWVLDYPVSKLNKPSIEFEKIIEKLVDDIGPTRVYTHSP
                     FDHHQVHVGVSKSVLRAADNVNQILYYETISSTTLDFKPNAFIDITKFIDLKIKSINM
                     HKSQSFRFYLQPNVVKSLANTRYVWGKVGTNPKGLAEAFRIQKFIL"
     gene            complement(1760..>2623)
                     /locus_tag="VEJ68_03265"
     CDS             complement(1760..>2623)
                     /locus_tag="VEJ68_03265"
                     /inference="COORDINATES: protein motif:HMM:NF013799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HXX05822.1"
                     /translation="WDLYMTQWHGIDNTQHAFLRFDKSVLTEKEAQVCDNVVLKTYEI
                     ADELVGDILQATKNAQDPETYTIALSDHGHVMGKRRFFINAYLYQKGFIKLKRDNDTN
                     KVTVDWENTLAFSQGMVHIYVNLKGRDPHGCVNPGKDHDEVVQQVIDALYDAKDPKTG
                     MRPIILALSNKDAEFIGLSGERVGDVIFAANPVYAGDNRLKVSGDMFEDLKVGFRDAS
                     IHGAQLPALDMGDFGTIKAMFIASGPKIKKGHVLKKPINMVDIAPTISHILNIPGPKD
                     CEGKILHDIFE"
BASE COUNT          852 a          469 c          478 g          824 t
ORIGIN      
        1 actacaagaa tacgtaccaa acctagctgt tctcgacggt gatgagctca gagaatggct
       61 ttcaccaaaa gacttttcaa aagagggcag agatgaacat aataaaaaag tcgcacatct
      121 ggcaaaactg cttgtaaagc ataacgttcc tgttgctgtc tcattaatca gtcccttcaa
      181 ggagaataga gaagcagctc gcaaaattat cggcgaaggt acatttatgg aaacatatgt
      241 gaaatgccca ttggatatat gcgaagggag agacgttaaa ggtatgtata aaaaagcaag
      301 aaataatgaa atcaaaaatt tcactggctt gcaagatcca tacgaagaac caacaaatcc
      361 agagatcctc attaacacgg atcaagaaac gctggagacg tctgcaaaga aagtgctttc
      421 catattaaaa aattcaggac attttaaata atttattccg cattctaaat caagcctgtg
      481 aattatgaaa atcgtagcaa taggtagcac actattagat attgaaattg ggtgttctaa
      541 tacacttcaa aaatttgtta aacttgggca ttctgtaagt ttggtcattc cgagagacaa
      601 gcactggaaa gaaaatcaaa aaatcgaaca agatgatatt ggaaccaaac tcaagatttc
      661 aaatatctat agagttgaaa attttgatta ttccaaaata acccagttaa atgtaaatct
      721 gataaattct ctaataggga ggattaaacc atcggttgca attattccgt tcattaataa
      781 ttctgataaa atgaaaaaaa tacttgccaa atccgcaata ttggcatgca gaaatgttga
      841 gactattcta atgtatgaga atagtaaaaa tagtaatttt ttacctaatg tctatcttgt
      901 cacaaataac aaaagaccac attatttgca aaagatttat gctaataaat taggaatctc
      961 acaaccagtt gaagcatttg aaagtcagag gttgatatta ctccaaaatg atttatttta
     1021 aaaaattcgc attgaaatta atgctttatt catgttataa agttgatttt acatgcccgt
     1081 ctcaggagag taattagatg aaaattgtga gtataggtgc acatccagat gatatagaat
     1141 tgggttcggg tgggactttg gcaaaacata aggcacgggg agatgtcact catgttattc
     1201 tctgtactct gggtggagta tgcggtgacc ccaaacaacg agaaagggag gcatctgagg
     1261 cgacacgtat tttaggcgtt aaaaaactct gggtcttaga ttatccagtc tcaaaattaa
     1321 acaaaccttc aatcgagttt gaaaagataa ttgaaaaact tgttgatgac ataggtccta
     1381 ctcgagtcta cactcatagt ccatttgatc atcatcaagt tcacgtgggt gtcagtaagt
     1441 cagttctaag ggcagcagac aacgtcaatc aaatattata ctatgaaact atttcttcaa
     1501 caactcttga ctttaaacca aatgcattca tagatataac aaaattcatt gatttaaaaa
     1561 taaaaagcat aaacatgcat aagagtcaat cattccggtt ctatttacaa cctaatgttg
     1621 tcaagtctct tgctaacact cgctatgttt ggggcaaagt tggtacaaat ccaaagggat
     1681 tggcagaggc atttagaatt cagaaattta ttttgtaagt agattttatt ttaggattat
     1741 tcttgttgac atatagttct tattcaaata tatcatgtag aatttttcct tcacaatctt
     1801 tggggcctgg aatgtttagg atgtgagaaa ttgtcggtgc aatatcgacc atgtttattg
     1861 gtttttttaa gacatggcct ttctttattt ttgggccgct tgcaataaac atcgctttta
     1921 ttgttccaaa atcacccatg tctaaagctg gtaattgtgc accatggatg cttgcatcac
     1981 gaaatcctac cttgaggtct tcgaacatgt cgccacttac ctttaatcta ttgtctcctg
     2041 cgtaaacagg atttgccgca aaaatgacat cacccactct ttctccactg aggccaatga
     2101 attcagcatc tttgttgctt agagcaagaa ttattggtct cattccagtc tttggatctt
     2161 ttgcatcgta tagcgcatct atgacttgtt gaactacttc atcgtggtcc tttccaggat
     2221 ttacacatcc atgaggatct cttcctttca aatttacata aatgtgaacc atgccctgag
     2281 agaaagctaa tgtgttttcc cagtctactg ttaccttgtt ggtgtcatta tcacgtttca
     2341 gttttatgaa ccctttttgg tatagatatg cgtttatgaa aaatcgtcgc tttcccatca
     2401 catgtccgtg atctgataag gcaatggtat aagtttcagg atcttgtgca tttttggttg
     2461 cctgtaaaat atctcctacc aactcatcgg caatctcata tgtttttaat actacattgt
     2521 cgcaaacctg tgcttctttt tctgttaaca ctgatttgtc aaaccttaga aaagcatgtt
     2581 gtgtgttgtc tatgccgtgc cattgggtca tgtataggtc cca
//
LOCUS       DASPUS010000142         3347 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1720789, whole genome shotgun sequence.
ACCESSION   DASPUS010000142 DASPUS010000000
VERSION     DASPUS010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3347)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3347)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3347
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1720789"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..642
                     /locus_tag="VEJ68_03270"
     CDS             <1..642
                     /locus_tag="VEJ68_03270"
                     /inference="COORDINATES: protein motif:HMM:TIGR01445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hint domain-containing protein"
                     /protein_id="HXX05823.1"
                     /translation="SGQKVGAFTIAEINQNNVTGYYNNPYPLARPGLGEFTIMHIGDT
                     LNPTCDGSAPLVITAINFPNSITVSTGQSSGSHIGGCPICLSADTQIDTPDGKINVKD
                     IQDGATVLSVDNNQDVIQSKIIKINKVFVGNAHRMIDLKMSDGRELFVSPNHPTYDGR
                     VIANLKVGETYDGSTVESIELVPYKYQYTYDILPDSFTGDYFANGILVGSTLK"
     gene            complement(1115..2086)
                     /locus_tag="VEJ68_03275"
     CDS             complement(1115..2086)
                     /locus_tag="VEJ68_03275"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HXX05824.1"
                     /translation="MSSVYSIFSGYDKMINQKRSGWILSVGIIILVIGIAIGLALDNA
                     FVLYGLVAAGIAIMIASFLMIVRQYERAIILRLGKYKRQVGPGVQTRFPFADNVLVVD
                     IRERVREFKAERMLTKDNVPVTIDAILRYKIIEQRASDAILNVENFNDMIQQVSQTTL
                     RNNIGSSQFQDVLSKREEINQHIKTIITNEATSWGIEVTGVEIRQVIIPQELEAAMSM
                     QAQAEREKNARVTYGESEVLVAKKFEEASRVYADNPVAYALRQSNMLYESIKVQGNTI
                     VMIPTEALNPMGFGNLGMTVAYLDSTKKAAQSASPEKKNTDNKDETK"
     gene            2229..2810
                     /locus_tag="VEJ68_03280"
     CDS             2229..2810
                     /locus_tag="VEJ68_03280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05825.1"
                     /translation="MHIQGIYQKAKVGTAAGLIGGFAIILSFFVIDSSIGAPLGTFYT
                     MIGLAVGLHGVNALIFGLFVHMLTAVTIGVVFCICSTLHPMLNLTSTWKGTFAGGVTG
                     LEVYAIFFMPITLFIVLPAIRYFAMGSGDTALTINELHMISALKANLNLIVWGSLALH
                     VLYGSTMGFFSSLMIHEEYKTKQSTTKQDFFTV"
     gene            2908..3165
                     /locus_tag="VEJ68_03285"
     CDS             2908..3165
                     /locus_tag="VEJ68_03285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HXX05826.1"
                     /translation="MSTAYVLLNVKPNSELEVIKLLKDLLTNVGQSVRYELQGVYGVY
                     DIVVKIESEILDDVKNMLAKIRRLDNVSSTMTMLVIEEQEV"
BASE COUNT         1026 a          646 c          613 g         1062 t
ORIGIN      
        1 tcaggacaaa aggttggagc atttacaata gctgaaataa atcagaataa cgtaactgga
       61 tactacaaca atccatatcc attagcgcgt ccgggactgg gggagtttac cattatgcat
      121 attggtgaca cactaaaccc aacttgtgat ggttctgcac cacttgtaat aacagcaata
      181 aactttccaa attcaataac agtctcaacg ggtcaatcat ctggaagtca tattggtgga
      241 tgcccaatat gcctctcggc agatacacaa attgatactc cggatggaaa aataaatgtg
      301 aaagacattc aggatggagc tactgttttg tctgtagata acaaccagga tgtaattcaa
      361 tcaaagatta tcaagattaa caaggtgttt gttggtaatg cacataggat gatagacctg
      421 aagatgagtg atggaaggga attatttgta tcacccaacc atccgacata tgacggtaga
      481 gtaattgcta acctcaaggt tggagaaact tatgacggat caacagtaga atcaattgaa
      541 ctggtaccat acaagtatca atatacctat gatattcttc cagatagctt tacaggagat
      601 tactttgcaa acggcattct tgtaggaagt acattaaagt agatcttagg tatcttttta
      661 aaataataat aggtgttccg gggtcaaagt gattttgaca ttggtaggaa tatgcaccga
      721 tgccggacac cgttagatag atatttccaa tactggaaat aagtcctagt tagtagctcg
      781 tgttacaaac aactattacg ataatcctgt aaaaacctct tcaaaatgac ccaattcact
      841 ataatttaga aaatttagcg gcgtggccct gtataggcaa aagcattctc ttgccactcg
      901 cacaccattg tgtgctctac tacgtaccat ttttcgcaga gccacgcaat ttcagtcgtt
      961 agaaattgcg tcttttttca ttataactaa tacgttttcg tgatatttaa caattagtca
     1021 taataatcac agatgaacaa tagtttttgt ataaaattta gatctgctag gcataattca
     1081 aatcaaattg ccatgctttt tttaaaaatt atagttattt tgtttcgtct ttgttatcgg
     1141 tattcttttt ttcaggagaa gctgattgtg ctgctttttt tgtactgtcc agataagcta
     1201 ctgtcatacc aaggtttcca aatcccattg ggttgagagc ctctgttggt atcatgacaa
     1261 tggtgtttcc ctgaacttta attgattcat acaacatgtt ggattgtctt aatgcatatg
     1321 ctacgggatt gtctgcatag acacgcgaag cttcttcaaa tttctttgcg accaatactt
     1381 ctgactctcc atatgtgact cgagcatttt tttcacgctc tgcctgagcc tgcatcgaca
     1441 ttgctgcttc tagctcttgc ggaatgatta cctggcggat ctctacacct gttacctcaa
     1501 ttccccaact tgtagcctca tttgtaatta ttgtcttgat gtgctggttg atctcttctc
     1561 tttttgacaa gacatcttgg aactgtgatg accctatgtt atttcgtaat gtcgtttggg
     1621 atacctgctg tatcatgtca ttgaaatttt ctacgtttaa gatcgcatca cttgctcgct
     1681 gctcaattat tttatatcga aggattgcat cgatggtaac aggaacatta tcctttgtca
     1741 acattctttc tgccttgaat tctcttacac gctctctaat gtctaccacc aaaacgttat
     1801 cagcaaatgg aaacctagtt tgaacaccgg gacctacctg tcttttgtat ttgcctagcc
     1861 gtagtataat ggctctctca tattgtctga ctatcataag aaaagacgca atcattattg
     1921 caattccagc tgcaaccagt ccatacaata caaatgcatt gtcaagagca agaccaattg
     1981 cgataccaat taccaaaatt atgataccaa cagagagaat ccatccagat ctcttttgat
     2041 tgatcatctt gtcgtatcca ctaaatattg aatatacgct tgacaaattc tctcccttga
     2101 ataatagaca agttcgttga atttaaagtc cgttaaacca gatgtatttt ttgcaattca
     2161 attggtgtga aattgaattt taaacaatat ccgtaaatat ttccaagtgc atataataca
     2221 tagattccat gcatatacaa ggaatttacc aaaaagccaa ggttggaact gcagcagggc
     2281 tcatcggagg atttgctata atattgtcgt tttttgtgat tgattcaagc attggagccc
     2341 cgcttggaac cttttatacc atgattggcc ttgccgttgg gctgcatggg gttaatgcct
     2401 taatctttgg actttttgta cacatgttaa cagctgttac tattggtgtg gtattctgta
     2461 tctgttccac attacatcca atgctaaacc ttacaagtac ctggaagggg acatttgcag
     2521 gcggggtcac tgggcttgaa gtttatgcaa tatttttcat gccaataact ctctttattg
     2581 tactccctgc aatcaggtac tttgcaatgg gctctggaga tactgcattg acaataaatg
     2641 agctgcatat gatatctgca ctaaaagcaa acctaaatct catcgtttgg ggctcacttg
     2701 ctcttcacgt actatatggt tctacaatgg ggttctttag cagcctgatg atacatgaag
     2761 aatacaaaac caagcaaagt acaactaaac aagatttttt tacagtttaa ttcaaaatca
     2821 attttcaaat tggttctatc acaactataa tcaaatcagg atttgtttct aattaaaact
     2881 gaaatattat gatgtggtat tgatatcatg tcaacagcat atgttttgct aaatgtcaaa
     2941 ccaaattcag aactagaagt aataaaatta ctcaaagatc tcttgacaaa tgtaggacaa
     3001 tctgtacgat acgagcttca gggagtatac ggagtctatg acattgtagt aaaaatagaa
     3061 tcagagattc tcgatgatgt aaaaaacatg cttgcaaaaa taaggagact tgacaatgta
     3121 tcctccacaa tgacgatgtt ggtaatagaa gaacaagaag tttagaaagg actacaacta
     3181 gaattgcatg cagactgtac agtgggatga ctctgtggtc atccaatttc attagacaga
     3241 tctgaagatc aatgcaatat atccgacaag tactccgaca atgatcacag ctacgccttc
     3301 atagaaggat agtggatcac tgcccccacc atatccgttt tgttctg
//
LOCUS       DASPUS010000143         4920 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1298902, whole genome shotgun sequence.
ACCESSION   DASPUS010000143 DASPUS010000000
VERSION     DASPUS010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4920)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4920
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1298902"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1541)
                     /locus_tag="VEJ68_03290"
     CDS             complement(<1..1541)
                     /locus_tag="VEJ68_03290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05827.1"
                     /translation="MKTKFLIPLLLSAILIFPQYAFPDSFADDSNSTSTNTNNVDSTP
                     TTPTTDQTTASTTPTTDQTTASTTPTQPISDNVTSNRVLSSSNPTTSDTNNSTSNTDT
                     ATSPVTQNTSSGTTTPPIQNTTSTTTTQPVSTSSAQSSSTSSAQSSSSATVQSGSTTQ
                     QISTTSQSSSASSAQSSSIANGQSNSSTSSLSSSSSSSTITSYTSNGITNNSTSNIKV
                     TNSLTSSINDTGGDQPPVQNVSLNTNVSVNLQIPAWVHNDAKWWSEGVISDTEFSQGI
                     EYLVQERVIIVPQGTSDSAGSSSQGIPSWVKSNARWWSEGAISDDQFVKGIQFMMQNG
                     YSFDASSSTTSSSAQASTGTASSSASSSSSSSSMSLVSTQSSPYANSGTTVFTSAESS
                     ASSSSSSSATSNTSTVPTTNSTSNDIHSTTLTITPNPGIVSSIGSITLTASIGDTSSS
                     PTTPTGTVSWSDGTAGGTFNPTSCTLSSGDCTTVFTPSTSSPSSLTVTATYSGDSTHS
                     SSTGTS"
     gene            1851..3764
                     /locus_tag="VEJ68_03295"
     CDS             1851..3764
                     /locus_tag="VEJ68_03295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013720690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004668 - protein-arginine deiminase
                     activity [Evidence IEA];
                     GO_process: GO:0009446 - putrescine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HXX05828.1"
                     /translation="MVEKKSVTIGLVQTRVSDNIKDNIENTISKIREAAAKGAQIICL
                     QELYKTKYFPTDERKDVTELAEPIPGETTSALSSVAKELNVIIIAPIFEADPSGKNYN
                     TAVVIGPDKGIMGKYRKMHIPHDPFFYEKSYFDVGDTGYQIFRTPNVNFGVLICYDQW
                     FPEAARTLALQGADLIFYPSAIGYLEGDPLSQDDWHTAWENIQRSHAIANGIHVASIN
                     RVGSEGNIKFWGASFVCDAFGRLIKRASEENEEVVVAELDISMNKRMQDGWGFRKNRL
                     PESYGAISSRLVSDTPKTLGFTMPAEWEAHDSTWLAWPHDPRTFPNRVNRVEKAYMKI
                     IMALSKSEEVNLFVTDLKMRTRVTKLLEQNRIDLQKINFYVWDYADVWFRDYGPIFVL
                     NKEKKQLAFVHWTFNAWGEKYKELIKDNQIPHIISQRLQINNFKPGVVLEGGSVEVNG
                     KGTLITTEQCLLNRNRNPNLSKAEIEEYLSNYFGVTKTIWLKSGVSGDDTDGHIDNLA
                     RFVNPKTVLCAYEEDENEENYPVLKKNYDTLVESADQDGKKFKVIKVPMPSSISSHVR
                     GQKTRLPASYLNFYISNKVVLVPTYKQKTDRIALKIIQGVFPTRKIVGIDCTDIIYGM
                     GAIHCITQQQPTV"
     gene            3807..>4920
                     /locus_tag="VEJ68_03300"
     CDS             3807..>4920
                     /locus_tag="VEJ68_03300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05829.1"
                     /translation="MSLFLKVSFVVVCLGILWASGSIPRSYADGFLDFPIRLTHAPTI
                     CALEPQHDPQYPNVGKQMLDETNYAVLDWKAKLNLGIEKHPLWNFTLIEVPLGKQPDF
                     DYSKCDITMNYFRMPSEPSLQYAIAGMTIPNFEDGKTRIEIYYLGIEVVSHMVEWQQG
                     QDTYYKYVDVPKYTGFIANEPQLAGTIRHELGHSFGLGHYIVPSIKLQSIVDGIIDMP
                     SIMIDTATIIGVTHYDITPLDIGEIKSIYGLNGFNDNSAHNPYLRSSIISTDKSDYSP
                     EEQARISINTNGFDAIETGTLFVLGPQNSLIGIGSVTKTNSTFLLQNQNKTGKYYLEY
                     LDNQKDIYDYSSFTVSNGEVIIPGWIKNNAKWWSDGS"
BASE COUNT         1568 a          865 c         1093 g         1394 t
ORIGIN      
        1 gatgttcccg tacttgaaga atgtgtactg tcaccgctgt atgtagcagt cacagttaaa
       61 gaacttggtg agcttgtaga cggggtaaat actgttgtac aatctccaga cgagagagta
      121 caagaagttg gattgaatgt gcctcctgca gtaccatcac tccaagatac agtaccggtt
      181 ggagttgttg gagacgacga ggtatcacct attgacgcgg ttaatgtaat tgatcctatt
      241 gatgacacta ttcctggatt cggcgtaatg gtcagagttg ttgaatgaat gtcattggaa
      301 gtcgaattag tagttggtac agttgaagtg ttcgatgtcg cactggatga ggacgaactg
      361 cttgctgaag actctgctga tgtgaatact gttgttcctg aatttgcgta tggagatgac
      421 tgtgttgaca ccaaggacat actagaggaa gaagatgacg aagatgcact tgagctggcg
      481 gttccagtag aagcttgtgc agaacttgat gtagttgagg aacttgcatc aaaagaataa
      541 ccattttgca tcatgaattg tattcctttt acaaactgat catcagatat tgcaccttca
      601 ctccaccacc tagcattgct ttttacccag cttggaattc cttgacttga tgatccggca
      661 gagtcagatg tgccttgcgg tactatgatt accctttcct gtacgagata ttcaattccc
      721 tgtgaaaatt ccgtatcaga gattactcct tcagaccacc atttagcatc gttatgaacc
      781 catgctggga tctgtaaatt aacagagaca tttgtgttca gtgagacatt ttgaacaggt
      841 ggttgatctc ctcccgtatc attaatcgag cttgttaacg aattggttac tttgatgttc
      901 gaggtagaat tattggtgat tccattagaa gtataggacg tgatggttga agaagatgat
      961 gaacttgaca aactcgaagt actagagtta gattgaccat ttgctataga acttgattgc
     1021 gcagaactgg cagaactaga ttgagatgtg gtgctaattt gctgagttgt agatcctgat
     1081 tgtaccgtag cactggaact tgattgtgca gaacttgtag agcttgattg agcactggaa
     1141 gtagagactg gttgagttgt tgtggtagag gttgtgtttt gaattggagg agttgtagtt
     1201 cctgatgatg tgttttgtgt aactggagat gtagctgtat cagtgttaga agttgaatta
     1261 ttggtatctg aagttgtagg gttggatgat gataataccc tatttgatgt cacattgtca
     1321 gagatgggtt gtgttggagt tgtggaggct gttgtctggt ctgtagttgg agttgtggag
     1381 gctgttgtct ggtctgtagt tggagttgtt ggtgtcgagt ctacattatt tgtattcgtt
     1441 gaggtactgt ttgaatcatc agcaaaagaa tctggaaaag catactgtgg aaaaattaag
     1501 atcgcagaaa gtaaaagtgg aattaaaaat tttgttttca tactgtctca attccacatt
     1561 tggataaata aaaaattgtg acacaatgtt catgaacatt gttcttgatg ccaaaaaact
     1621 tatagattgg tgaacaaatg attgggatac cactcattga gagacaaact aaccaactag
     1681 attataagaa tagcgtagct ttcatcacta gaaaggcctc aaaagtactg aattgtttat
     1741 ttcaacgaac ccaagaaagc cccaaaaacc aaacaaagaa aaaataaaga tcgccatttt
     1801 tgacacatca acaaagtaaa tataagaacc taaaatgaaa agtgcccata atggttgaaa
     1861 aaaaatctgt aaccatagga ttggttcaga ctagagtttc agacaacatt aaagacaata
     1921 ttgaaaatac catatctaag ataagggaag cagcagctaa aggcgcccag attatctgtt
     1981 tgcaggaatt gtacaagacc aagtattttc caactgatga gagaaaagat gtcacagaat
     2041 tagcagaacc aataccaggt gagactacat ctgccctatc cagcgttgca aaagaattga
     2101 atgtgataat catagcacct atttttgagg cagatccatc gggcaaaaat tacaatactg
     2161 ccgtagtcat tggccctgac aaaggaataa tgggcaagta tcgaaagatg cacattccac
     2221 atgacccatt cttttatgaa aagagctatt tcgatgtagg agataccgga tatcagattt
     2281 ttcgtacacc aaatgtaaac tttggagtac tcatttgcta tgaccaatgg tttcctgagg
     2341 ctgcacgaac cttggcattg caaggggcag accttatctt ttatccctct gcaattggct
     2401 atcttgaagg agacccatta tcgcaggacg actggcatac tgcgtgggaa aacattcaac
     2461 gttctcatgc aatagcaaat ggaatccatg ttgcgtcaat taaccgggtt ggttcagaag
     2521 gcaacataaa attttggggt gcctcgtttg tctgtgatgc ttttgggaga ttgataaaac
     2581 gagctagtga ggaaaatgaa gaggtggtag ttgcagaact tgacatctcc atgaataaga
     2641 ggatgcaaga cggatggggt tttagaaaga atcgacttcc agaatcttat ggtgcgatta
     2701 gttcacgtct tgtcagtgac acaccaaaga ctcttggttt tacaatgcca gcagagtggg
     2761 aagcacatga ttcaacctgg cttgcatggc cacatgatcc acggacattt ccaaatagag
     2821 taaacagggt ggaaaaagca tacatgaaaa ttattatggc attaagtaag agcgaagaag
     2881 tcaatctctt tgtaaccgac ttgaagatga gaacaagagt aacaaaactc ttagaacaaa
     2941 atcgcataga cctgcagaaa attaattttt atgtatggga ttacgcggat gtttggttca
     3001 gagattatgg tccaattttt gtactcaaca aggagaaaaa gcagttagct tttgttcatt
     3061 ggacattcaa cgcatgggga gaaaagtaca aagaactcat caaggacaac cagataccac
     3121 atatcataag tcaaaggttg cagataaata atttcaaacc aggtgtcgtt ttggaaggtg
     3181 gatcagtaga agtgaatgga aaaggcaccc tgataactac agagcaatgc ctccttaaca
     3241 gaaacaggaa cccaaatctt tcaaaggcgg aaatagaaga gtatctttca aattattttg
     3301 gagtaaccaa gacaatctgg ctaaaatctg gcgtttccgg tgacgataca gatggtcaca
     3361 tagataatct ggcacgattt gtcaatccga agaccgttct ttgtgcatat gaggaagatg
     3421 agaacgaaga gaattatccc gtactaaaga aaaactatga taccctagta gaatcagcgg
     3481 accaagatgg gaagaaattc aaagtcatca aggtgccaat gccttcttcc atcagctcac
     3541 atgtaagggg ccaaaaaaca agactgcctg caagctatct taacttttac atttcaaaca
     3601 aggtagtttt ggtgcccacg tacaaacaaa agactgaccg aattgcttta aaaataatcc
     3661 aaggtgtgtt tcctacaaga aagatcgtgg gaattgattg taccgatatc atatacggca
     3721 tgggcgcaat ccactgcatt acacagcagc agccaactgt ataattccat gttatcattt
     3781 atcttaacgg ataacatgaa ccagttgtga gtttatttct caaggtttct tttgttgtag
     3841 tatgtcttgg aattttatgg gcttcaggtt caattccaag atcatatgcc gatggttttc
     3901 ttgattttcc catcaggtta acccacgcac ctaccatatg tgcactagaa cctcaacatg
     3961 atcctcaata cccaaatgtt ggaaaacaga tgttggatga gaccaactat gcagtacttg
     4021 attggaaggc aaaattaaat ctaggaatag aaaaacatcc gctctggaat tttaccttaa
     4081 tcgaagttcc attaggaaaa cagcctgact ttgattattc aaagtgtgac attacaatga
     4141 attactttag gatgccttct gagccaagtt tgcagtatgc aatagccgga atgacaattc
     4201 caaactttga ggatggcaag actaggattg agatatacta tctgggaatc gaggtggttt
     4261 cacacatggt agaatggcag cagggtcaag atacctatta caagtatgtg gatgtaccaa
     4321 aatacacggg ttttatcgca aacgagcctc aacttgcagg tacaattcgt catgagctgg
     4381 gtcactcttt tggcctaggg cattatattg ttccatcaat caaattgcaa tcaatagttg
     4441 atggcattat tgacatgccg tccatcatga tagacacagc caccataata ggtgtcacac
     4501 attatgatat tacaccatta gatattggag agataaaatc aatctatggt ctaaatggtt
     4561 ttaatgacaa ttctgcgcac aatccatatc ttagatcaag tattatttct acagacaagt
     4621 cagattatag tccggaagaa caggctcgaa tatccataaa cacaaacggc tttgatgcca
     4681 tagagacagg aacattattt gtcttaggcc ctcaaaacag cttgatagga attggttctg
     4741 tcacaaagac aaactcgact tttctgttac agaatcagaa caagacagga aagtattatt
     4801 tggaatatct ggacaaccaa aaagacattt acgattattc cagttttact gtatcaaatg
     4861 gagaggttat cattccaggg tggataaaaa ataatgccaa gtggtggtct gatggttccc
//
LOCUS       DASPUS010000144         2270 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1031284, whole genome shotgun sequence.
ACCESSION   DASPUS010000144 DASPUS010000000
VERSION     DASPUS010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1031284"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..542
                     /locus_tag="VEJ68_03305"
     CDS             84..542
                     /locus_tag="VEJ68_03305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013483221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HXX05830.1"
                     /translation="MVKVDDLDMIILSELSQDANISVPRISKKINVNSSVVYSRIKRL
                     VKRKLIERFTIVVNDRELGYTVKALTGINMDSKMRDHVIEELMKIAEVREISEVTGRF
                     DIIVTMFAKNLDEMHRLISEKVGRIQGVQRSESFIEMKRTTKPMPYKPAK"
     gene            595..1500
                     /locus_tag="VEJ68_03310"
     CDS             595..1500
                     /locus_tag="VEJ68_03310"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010192136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0048034 - heme O biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HXX05831.1"
                     /translation="MLTTKTSSRIKTYYEVTKPKIWYLLVFTAIGAAFTASNIYHIPI
                     SPLNWGLVIGGVIAGSAAANTLTNYNDRDIDAIMERTKDRPIPSRRIYPAKKALHFGL
                     ILTVISLVCAFAINIWAGIFMAFGLADNILVYSKLLKRRSRTNIVLGGFSGGAPAMIG
                     YVAVTTTGLWDLGLVMAGLVFVWIPMHIWSLTLHVKEDYNKVKVPMLTAVESEKTSVR
                     VIAGTTLMMVLFSVFPFFMTDSSGKHLFHEVYLYAAIVSGAIMVALSMWLLIKPSERA
                     SWTLFKFSSPYLAILFIALMVDSAH"
     gene            complement(1512..2270)
                     /locus_tag="VEJ68_03315"
                     /pseudo
     CDS             complement(1512..2270)
                     /locus_tag="VEJ68_03315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965888.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase domain-containing
                     protein"
BASE COUNT          706 a          416 c          432 g          716 t
ORIGIN      
        1 atgtttaact gatcgagaat tatagaaaat ttataataac aagtttaata agatccattt
       61 attcacaata atctgtgttt tgaatggtaa aagttgatga tttggatatg ataattttgt
      121 ccgaactttc acaggatgca aacatttcag ttcctcgaat atcaaagaag ataaacgtca
      181 attcatctgt ggtatacagt agaataaaga gactagtaaa acgaaagctt atcgaacgtt
      241 ttaccatagt tgtaaatgat agggaactag gttacacagt aaaggccctc actggaataa
      301 acatggattc aaagatgaga gaccatgtaa ttgaggagct catgaagata gcggaggtaa
      361 gagagatctc agaagtcact ggtaggttcg acattattgt aacaatgttt gccaaaaact
      421 tggatgaaat gcacaggttg atatctgaga aggttggtag aatacaggga gtacagcgct
      481 cagagagttt catagagatg aaaaggacaa ccaaaccaat gccctacaaa ccagcaaagt
      541 aatcaaattt tttcaaccta taaataacaa aggggttcaa agaaggctga gagtgtgtta
      601 acaacaaaaa ccagttccag aattaaaaca tactatgaag ttaccaaacc aaagatatgg
      661 tatctattgg tttttactgc aataggagcg gcgtttacag catctaatat ttatcatata
      721 ccaatttctc cccttaactg gggtttagta attggcggtg tcatagcagg ttctgctgca
      781 gccaatacac tgacaaatta taatgataga gatatagacg caattatgga aagaacaaaa
      841 gataggccaa ttcctagcag aagaatttat cctgcgaaaa aggccctaca ttttggatta
      901 atccttacag taatctcact agtttgcgct tttgcaatca atatctgggc tggaattttc
      961 atggcatttg gtcttgcaga taatatttta gtttacagta aattactcaa gcgaagaagc
     1021 agaacaaata ttgtcctagg aggattttcc ggtggagctc ctgcaatgat tggatatgtt
     1081 gcagtaacaa cgacaggtct ctgggaccta ggactagtga tggctggatt agttttcgtt
     1141 tggattccta tgcacatatg gagcctcacc ttgcacgtca aagaagatta caacaaggtc
     1201 aaagttccta tgctcaccgc ggttgaatct gaaaaaactt ctgttcgagt aatagctggc
     1261 acaactctca tgatggtact ctttagtgta tttccatttt ttatgacaga ttcatcagga
     1321 aaacatctat ttcatgaagt ctatctctat gcagcaatag tatctggagc tataatggtt
     1381 gcattgagta tgtggctcct cataaaacca tcagaaagag catcatggac attgttcaag
     1441 ttttcaagcc catatcttgc aatattattt attgcattga tggttgattc tgcacactag
     1501 tacctgaatc gttacttcaa ataatttttt agcgatatac catctgactt tggaattttg
     1561 gcaatctcaa agccctctgc gcgttttgag agggatttgg ttgcatctac acccattttg
     1621 gttgtcaaca aatttttttg atcacttgag ggatcaagac ttgaacctcg tacctttgat
     1681 attatcataa gatctttatc agcctgaaat cttgtagcaa tggcatattc tacagctacc
     1741 ggatctgatg gatctatatc atcatcgaca acagtaacat gtttgaggga tctatgggca
     1801 gcaaatgctg cctttattgt cctcttggca tcagattctc ttttctttga aatttgaact
     1861 acggcgtgca accatttgca tccaccttcg gtcagtacta ctttctttgt ctgtggcata
     1921 gtttgtctga gacttttgtt tagtttagct tcaattggca ttcacatcag caatctatgt
     1981 tcagagtatc cagacaaaat atcatgaaag atcggattgt ttctaaaata tattctatct
     2041 agctcaaaga caggttgcat tctcttaaaa tcatatgtac gaagcatttc caccatccat
     2101 tctttgtgag ttttgtcttt aaggatacgt ccctccataa ctatttctgc gtctgatggt
     2161 actaacatac ctgaatatgg acccattgct aaagtgagtt ttttatccaa taattcatta
     2221 gcaatctcta gctcatctct tccccattct gcttgatatg ctcctgcaat
//
LOCUS       DASPUS010000145         3728 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1174297, whole genome shotgun sequence.
ACCESSION   DASPUS010000145 DASPUS010000000
VERSION     DASPUS010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3728)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3728
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1174297"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..328)
                     /locus_tag="VEJ68_03320"
     CDS             complement(<1..328)
                     /locus_tag="VEJ68_03320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family N-terminal
                     domain-containing protein"
                     /protein_id="HXX05832.1"
                     /translation="MQNRRKNLLKFCNNLECDTLVAFEPENLFYMTGFWGEAIGILDK
                     NGATIIAPELEVGRAKEESINCKVVKSERGKGSVSTLIDVIKGRKIRTDTNNYDVIQS
                     LKKNLPR"
     gene            357..1406
                     /locus_tag="VEJ68_03325"
     CDS             357..1406
                     /locus_tag="VEJ68_03325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (5-methylaminomethyl-2-thiouridylate)-methyltransferase"
                     /protein_id="HXX05833.1"
                     /translation="MFAGRFRYWKQSFCLVEEKKKIVALLSGGLDSRLAVKMMQTQGF
                     DVTAVAIKTPFCDFDCGRGCGFEIRETADMLGVDLKTVYLGDEYIEMLKNPKYGFGSG
                     MNPCIDCRAMMFKAGKKVMEDINAEFIISGEVLGQRPMSQHGPALRTIEKEAGLDGKI
                     VRPLSGGLLPPTEPEMSGLIKRENLGMIRGRSRKEQLKLAHEFGFENPPNAGGGCLLT
                     DPKFAIRVKDLFKHTETPTTNDIDLLKIGRHFRFDNKTKLIVGRNKDENEMLQALALP
                     NDTLLETKDHVGPISLLRGDDSENNLRLAAAITLRYSDAPKDFTGVCLVQKNNASTEI
                     STNGITESEYLKFRI"
     gene            1479..1757
                     /gene="sepF"
                     /locus_tag="VEJ68_03330"
     CDS             1479..1757
                     /gene="sepF"
                     /locus_tag="VEJ68_03330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0090529 - cell septum assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein SepF"
                     /protein_id="HXX05834.1"
                     /translation="MQTQKMPTYLKAITLRDYSDIHAVKEDIKKGMILVLRVTPLAQK
                     NVDELRKTVEEIYNIAKNNDADIARLGEERIVVTPSGVKIWKAEYDLK"
     gene            complement(1749..3680)
                     /locus_tag="VEJ68_03335"
     CDS             complement(1749..3680)
                     /locus_tag="VEJ68_03335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-CASP ribonuclease aCPSF1"
                     /protein_id="HXX05835.1"
                     /translation="MQRNKQQREISPIPNVMGTILQSIPKEAEVTKIEYEGPRIAIYT
                     KNPRFLMEHNDVISNMVNVIKKRIVVRTEESIRKNEEEARQILTQMLPKDTDLRGTFF
                     DTATGELTVEVKRPWLLNNNETFNLADLVTKTGWRVRIRKSTVIQSQTIQTINYNLKI
                     SSVERSKHLRQVGEQIFRPKLSEDAEVSLITLGGFSQVGRSCMLLTTHESKILIDCGI
                     NPGTRSPLEAYPRLDWANITLDELDAVVISHAHLDHTGFLPVLFKYGYKGPVYCTEPT
                     LPMMNLIQLDAIKVAAAQGKIPIYSERDVKQVMKQTISLPYGTVTDISPDIKLVFSNA
                     GHILGSASCHFHIGNGNHNFVYTGDLKYGKSMLFESASWNFPRVETLLIESTYGAKED
                     IQPTREEVESAFIKSVNETLRNGGKVLIPIPAVGRAQELMMVIDQYMKTGQLMEAPVF
                     TEGMISEATAIHESYPEYLARELRQKILETEENPFDSEYFTNIEHSDAREEPLREGPC
                     IIMATSGMLEGGPVLEYFKNIAPVQKNKILFVSYQVNGTLGRRVLDGSRQVSIVGKEG
                     KIEVININCSTEKLDGFSGHSDYNQLMSYVHKLRPKLRRVIVNHGERRKCENLASSIH
                     RMFRIATTCPQVQEGLRLL"
BASE COUNT         1076 a          679 c          740 g         1233 t
ORIGIN      
        1 cccgtggcag attcttcttg agtgattgaa ttacatcata attgttagta tcagtgcgta
       61 tctttctgcc ttttatcaca tcaattagag tagaaacgga acccttacca cgttctgatt
      121 ttaccacttt gcaattaatc gactcttctt ttgcacgacc tacttcaagt tctggtgcta
      181 ttatggtagc accattttta tccaagattc ctattgcctc tccccaaaaa ccagtcatgt
      241 aaaagaggtt ttcaggttca aatgctacca gagtatcgca ttctagatta ttgcaaaatt
      301 ttaagagatt ttttctgcga ttttgcatca attcagattt tagcatgtct gaatttatgt
      361 ttgctggaag gtttagatat tggaaacaga gtttttgtct tgtggaagaa aaaaagaaaa
      421 ttgtagcatt attgtcagga gggcttgata gtagactagc tgtaaagatg atgcaaaccc
      481 aaggatttga tgtaactgct gttgcgatca agaccccgtt ttgtgatttt gattgtggaa
      541 gaggttgtgg ttttgagatt cgtgaaactg cagatatgct tggtgtagat ctgaagactg
      601 tttatcttgg tgatgaatac attgagatgc tcaaaaatcc gaaatatgga tttggctctg
      661 gaatgaatcc gtgtattgat tgtagagcaa tgatgttcaa agctggaaag aaagtcatgg
      721 aggacattaa tgccgagttt atcatttcag gcgaggtctt gggtcagcga cctatgtcac
      781 aacatggacc agcattgaga acaatagaaa aagaagctgg acttgatgga aagattgtaa
      841 gaccactttc aggtggactt ttgccaccaa ccgaaccaga gatgagtggt cttatcaaac
      901 gtgaaaatct aggaatgatt agaggacgtt caagaaaaga acaactaaaa ctagctcatg
      961 agttcggttt tgaaaatcct ccgaatgctg gaggcggttg tcttctgaca gatccaaaat
     1021 ttgcaattag agtcaaagat cttttcaaac atactgagac tccaacaaca aatgacattg
     1081 atcttttaaa aattggcaga cattttcgat ttgataataa aacaaaatta attgttggcc
     1141 gaaacaaaga tgaaaacgag atgttacaag ctcttgctct tccaaacgat actttgcttg
     1201 aaacaaaaga tcacgttgga ccgatttcac ttttgcgtgg agatgattct gaaaataatt
     1261 tgagattagc tgcagctatc accctacgat attctgatgc tccaaaggat ttcactggag
     1321 tttgtttagt acaaaaaaat aatgccagca cagagatttc taccaatggt atcactgaat
     1381 ctgaatatct caagtttaga atttagctgt acaagctagt ctgtgaattg ctattgactg
     1441 caaaggcttt ttgagggagt agatggaata ccaatggtat gcagacacag aagatgccga
     1501 catatctcaa ggctataacg ctaagagact atagcgacat tcatgcagtt aaggaagaca
     1561 tcaaaaaagg aatgattcta gttcttcgcg ttactcctct tgcacaaaaa aatgtagatg
     1621 agctaagaaa aactgtagag gaaatctaca atattgcaaa aaataatgat gctgacattg
     1681 caagattagg agaagaaaga attgttgtta cgccgtctgg cgttaagatc tggaaagcag
     1741 agtacgatct aaagtaatct taatccttct tgaacttgtg ggcaagttgt tgcaattcta
     1801 aacatcctat gaattgaact agcaagattt tcacactttc ttcgctcacc atggtttaca
     1861 atcacccttc gaagttttgg tcttaatttg tgcacatatg acattagttg attgtaatca
     1921 ctgtgaccac taaatccatc aagtttttcc gtagagcagt ttatgttaat tacttcaatc
     1981 tttccttcct ttccaacaat tgaaacttgc cttgagccat caagtactct tcttcctaga
     2041 gttccattta cttgataaga gacaaacaaa attttgttct tttgaactgg cgcaatgttc
     2101 ttaaaatatt ctaggacagg tccaccttcc agcatgcctg aggttgccat aattatacat
     2161 ggtccttctc gcaatggttc ttctcttgca tcagaatgtt ctatatttgt aaaatattca
     2221 gaatcaaatg gattttcttc agtctccaga attttttgtc tgagctcacg tgcaagatat
     2281 tcaggataag attcgtgaat tgcagttgct tcagaaatca ttccttctgt aaagaccggc
     2341 gcttccatga gctgacctgt tttcatgtat tgatcgatta ccatcatcag ttcttgtgca
     2401 cggccaactg ctggaattgg gatcaatacc ttaccaccat ttcgtagcgt ttcatttact
     2461 gatttgataa atgcagattc tacctcttct cttgttggtt gtatatcctc ttttgcacca
     2521 taagtgcttt caattagcag ggtctcaact cttggaaaat tccatgatgc gctctcaaag
     2581 agcatggatt tgccgtattt cagatctcct gtatagacaa agttatgatt tccatttcca
     2641 atatgaaagt gacatgatgc cgagcctagt atatgtccgg cattagagaa aacgagttta
     2701 atatcaggag aaatatctgt gacggtacca tatggaagag agatggtttg cttcatgact
     2761 tgttttacat ctctttcaga atatatcggg attttaccct gtgctgcagc caccttgatt
     2821 gcatcaagtt ggattaaatt catcatgggt aaggtaggtt cggtacaata aacaggtcct
     2881 ttatagccat atttgaatag gactggtagg aacccggtat gatccaagtg agcatgactg
     2941 ataacaactg cgtctagctc atcaagtgtg atgtttgccc agtcaaggcg tggatatgcc
     3001 tctagtggac ttcgagtgcc tggatttatg ccacaatcta ttaggatttt gctttcatgt
     3061 gtcgtaagaa gcatacaaga tcttccaacc tgactaaatc ctccaagagt tatcagagag
     3121 acttcggcat cctcgctaag ttttggtctg aagatctgtt caccgacctg tcgcaaatgc
     3181 ttgcttcgct caacagatga tattttgagg ttatagttga tagtttgaat ggtttgagat
     3241 tgaattacag ttgattttct tattcgaaca cgccaacctg tctttgtgac aagatctgct
     3301 aagttgaatg tttcattgtt atttagtagc caaggtcgtt ttacttcaac tgtaagttca
     3361 ccagttgcag tatcaaagaa agtaccacgt aaatcggtgt cttttggaag catttgagtt
     3421 agaatctgtc ttgcttcttc ctcgtttttt ctaatggatt cttctgttct tacaactatt
     3481 ctctttttta tgacgttaac catgtttgag attacatcgt tgtgttccat caaaaagcga
     3541 ggattttttg tgtatattgc aattctaggt ccttcatatt ctatcttagt tacctctgcc
     3601 tcttttggta tactttgaag tatagttccc atgacattgg gtattggaga tatttctcgt
     3661 tgttgcttgt ttctttgcat taaatcacta taacgtaatt atggctttct tctgttcttt
     3721 tgttaaga
//
LOCUS       DASPUS010000146         2159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1302329, whole genome shotgun sequence.
ACCESSION   DASPUS010000146 DASPUS010000000
VERSION     DASPUS010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1302329"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(231..2141)
                     /locus_tag="VEJ68_03340"
     CDS             complement(231..2141)
                     /locus_tag="VEJ68_03340"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HXX05836.1"
                     /translation="MSSSTTNQKSTLDFILKALYYFPVRFSICAFISSIILIKNDAIL
                     VTAEKQILVGMLHFFRFPSYFLGGQLYVGHFNAPTQIIVPIDTQLMFTVFFITLAIVT
                     RASLETRIRILFYGGLCALALILNEFLIIVFFTTLGFTSSDPYVQAGIIGTGIVGALC
                     IETMLFNVITLPKATKTQILVKRDYTDEYIFLAVLLFAAGVVIYLTFNVMGIKADSPG
                     ATYVALNISNILALKYYIAYFFYEAKLPQWIRWIRHPSMHKKMNLSATFLLPAYNEEK
                     GIGNCIRSIDVAASYYPGKTEIVVINDGSKDNTAKVVEEEISKLKHSTGKLYNIPNSG
                     KGYALQYGLERVSGDVIFRVDTDSVVDKHAIEPVMKHFLDPTVGSVSGMIFPVDERSL
                     WQKAMVMLGCLFVFYRRGQELIDSILVQPGAFSIFRREALVKAGGWARHQFGEDGELT
                     LRLGRFGYRNEFEQHAIVLSDAPDSLKELREQRIRWGIAYYHSRGRNTEILKEYSGPR
                     KVIFLLNLLSHGGGFMLSMFWPFLAAAIVAGTSSYSITDLAMLLGIPLSLVIVELLIF
                     GMQYILYIYFLKKFNKFYLVKYLPLMRIYDLILSLAIKPEAMEILLAWSSKYKELNDK
                     TFKILGRMAKNA"
BASE COUNT          691 a          431 c          379 g          658 t
ORIGIN      
        1 aagaatacta taattccaga aatcttgaac ggtttaataa tatttgtact caacttgtaa
       61 tgccaacccg acttcacaaa caaacggtca atataaaaag actttgttca ctttccattt
      121 ctggaatctg attgagttta gttttaatcc acgctgaaaa aatgtgagtc ttttgtccta
      181 aaaaagtctc taggattaat taaaaaataa tttttcccaa aaatgaaaaa tcaggcattc
      241 ttggccattc gtcctaaaat cttgaaagtt ttatcattta gctctttgta ttttgatgac
      301 catgcaagaa gtatctccat tgcttccggc tttatggcaa gcgatagtat caagtcgtat
      361 atacgcatca gtggcagata tttcaccaga taaaatttgt tgaatttctt tagaaaatag
      421 atatacagaa tatactgcat tccaaagatc aataactcaa ctattactag actgagtgga
      481 attcccagta acatggctag gtcagtaatt gaataagaag aagttcctgc tacaatcgcc
      541 gcagctaaaa atggccaaaa catggataac atgaatccgc caccgtgaga gagaaggttg
      601 agcaaaaaga taacctttct aggtccagaa tattctttta aaatttcggt atttcttccc
      661 cttgaatgat aatatgcaat gccccagcgg atgcgttgtt ctcttaactc ctttaaactg
      721 tctggtgcat cagacagcac aatggcgtgc tgttcaaact catttctgta accaaacctt
      781 cctagtctca aagttaattc accatcctca ccaaactgat gtcttgccca tccacctgct
      841 ttgactaatg cctctcttct gaagatagaa aaggcgccag gttgaacaag aattgaatca
      901 attaattctt gtcctcttct gtaaaaaaca aacagacatc ccaacatcac cattgctttt
      961 tgccacaaac tcctctcgtc taccggaaag atcattccag ataccgagcc aacggtcgga
     1021 tcaagaaagt gtttcattac tggttcaatt gcgtgcttgt cgaccacaga atcggtatct
     1081 actcgaaaaa taacatctcc gctaactcgc tccagcccat attgcaacgc gtagcccttg
     1141 ccagagtttg gaatgttata tagtttacca gttgaatgct tgagtttact gatttcttct
     1201 tctactactt tggcagtgtt atcttttgaa ccatcattta taacaacaat ctctgtcttg
     1261 cctggataat atgatgcggc aacatctatg ctccggatac agtttcctat tcctttttct
     1321 tcattataag cagggagtaa aaaagtggcg gatagattca tttttttgtg cattgatgga
     1381 tgcctaatcc agcgtatcca ttgcggcagt ttggcttcat aaaaaaaata cgcgatataa
     1441 tatttcaaag ccaagatatt tgagatgttg agagccacat aggtagctcc cggtgaatca
     1501 gcctttatcc ccattacatt aaaggtgaga taaatgacta cgcctgcggc aaaaagcaag
     1561 actgccaaga agatgtactc gtcagtatag tcccttttta ccaagatttg tgtttttgtg
     1621 gctttgggca aagtgatcac attgaaaagc attgtttcaa tgcaaagagc cccaacaatt
     1681 ccagtgccaa ttatacctgc ttgtacatat ggatcagatg atgtgaatcc taacgtcgtg
     1741 aagaaaacaa taattagaaa ttcgtttaag ataagtgcaa gagcacacaa tcctccgtaa
     1801 aataggatcc ttatgcgtgt ctcaagtgat gcacgtgtaa caattgcaag tgtaatgaaa
     1861 aatactgtaa acatcagctg tgtatcaata ggaacaatta tctgagttgg cgcgttaaag
     1921 tgcccaacat aaagttgtcc tccaagaaag tatgaaggaa atctgaaaaa gtgaagcatt
     1981 cctaccaaaa tctgtttttc agctgtaact aaaatcgcat cattttttat gagaataata
     2041 gaacttatga aggcacatat gctgaatctt acaggaaaat aatatagtgc ttttaatata
     2101 aaatccagag ttgatttttg gtttgtcgta gaactactca tttagcgtta caatttgtt
//
LOCUS       DASPUS010000147         9139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_349902, whole genome shotgun sequence.
ACCESSION   DASPUS010000147 DASPUS010000000
VERSION     DASPUS010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 9139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9139)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9139
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349902"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..157
                     /locus_tag="VEJ68_03345"
     CDS             <1..157
                     /locus_tag="VEJ68_03345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010191048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HXX05837.1"
                     /translation="TVRLIDGILYVRGSSHFSKEVPIETTPDMGIHDFKYRNGVLTLR
                     IKKLEAL"
     gene            complement(143..1246)
                     /locus_tag="VEJ68_03350"
     CDS             complement(143..1246)
                     /locus_tag="VEJ68_03350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008301516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HXX05838.1"
                     /translation="MKLKNKSRTRTSEARKQRLLSLLQKHGVNIYEDLDQGKFPQFVI
                     PSRSVNNIVYDKKIRQYILGNASAVRSSRNMSQLRSYTQLAWLAFFVNRLVREGKSST
                     LRDIYYSSQAFSIDFEDQPESDNIIVDLEAVLTSPREEFHIFPEERSSVFGDLTIEYT
                     VPGYEGRRVNLSDHPDGYLIGPSLSSAELVDTSAELVIAIEKGGLFTRFVEEKVHKKF
                     KAIIVDTAGQAPRSTRNLLRRLNSELSLPVVILADGDVYGEHIAMVIKSGSANAAHLR
                     ELTVPDAKWLGVWATDIEKYKLPTIPMTESDVKRIYDLQKDPRYQEGNWKKQLEVFLK
                     LKRKAELEAFSKYGLTNITDKYLPEKLEESKSF"
     gene            complement(1224..3065)
                     /locus_tag="VEJ68_03355"
     CDS             complement(1224..3065)
                     /locus_tag="VEJ68_03355"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase VI subunit B"
                     /protein_id="HXX05839.1"
                     /translation="MSSSKEVFSQISPSEFFYRNRDLAGFSNPTRSLYTSVREFVENA
                     LDACDQKKILPDIHLSIKAVDQEQGDPKHYILTVKDNGPGIDPKHVPHAFGTVLYGSK
                     FGLKQARGMFGLGATMAILYGQITTNKPVTVKSCWDGKTLDEFVMLLDIQKNKPIIQK
                     HTTKEAAKTGLSVSIVLEGDYSKAGTKIRDYVSETSLITPYASITFEDPSGEKLHFPR
                     IVKEMPPPPTIIKPHPHGIDVETIRRMIVDTHYQIPTVDNNMIDKVKKELGGQKKHLS
                     AKDILDRAQKRWSDLSRPVRTVLAAMSFLNLDFDGLQKIRIDDIDVANKKITYWDFGQ
                     SQSNVVELDPESPYYKQLANTVQGDTLLTFLTKRFQRVGPTTAEKFCEFAKLKPEKRI
                     GSMTNEELVKIADALQKFDDFLAPDPSCLAPLGEEPLSKGIMKFFNPEFASVIQRSAS
                     AYSGFPFIVEMGIAYGGDIPSAGMKVYRFANRIPLLYDEGSDVVLKIINEMDWSRYKV
                     KGDPPLVIVSHICSTRIPYKTVGKENVADRPELERELKNALQYLARKLAVHMSRQGMA
                     DMAKKRANLYSKYVPLIAQFATELSGKKKEPNYKQLVKMGSEIEEQI"
     gene            complement(3052..3624)
                     /locus_tag="VEJ68_03360"
     CDS             complement(3052..3624)
                     /locus_tag="VEJ68_03360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HXX05840.1"
                     /translation="MIFEKTVLIPLDRVGVLIGKSGSIKTKIENICSVSLLIDGQTGE
                     ITIRGNENAEDMMPFKAEEIVLAIGRGFSADNAMRLLQGENSLHVIDLREFVGKSSSQ
                     IGRVKSRIIGEGGRVRKNVEDLSGASICVYGRTVAIIGEGKQLRSAVNAITSLSSGST
                     HGKVYNDLQESRRRQKIEKLQLWEGENVFQ"
     gene            complement(3621..4400)
                     /locus_tag="VEJ68_03365"
     CDS             complement(3621..4400)
                     /locus_tag="VEJ68_03365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protein kinase RIO"
                     /protein_id="HXX05841.1"
                     /translation="MSDKLQEKLAKRIENRLVGKDRERKSQKDGFSNKVFDEVFDKAT
                     TMAVSDMKNSGTISYVNGSVGSGKESKTFWAVDPSGKDLALKIYLVATLNFKKRMPYL
                     LGDPRFTKIRKGTRNLVELWAQKEFANLKHCYESGISCVKPIAVVKNVLVMEFVGKNG
                     VPAPTLVESEVDYKDYTNAISIMDEMYNKSKIIHADFSEYNIFKTKKGLIVFDFGSAV
                     DIRHPNATEFLERDIKNITRFFVKRGLTVENPIDILKRIVK"
     gene            complement(4441..4752)
                     /gene="eif1A"
                     /locus_tag="VEJ68_03370"
     CDS             complement(4441..4752)
                     /gene="eif1A"
                     /locus_tag="VEJ68_03370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor eIF-1A"
                     /protein_id="HXX05842.1"
                     /translation="MGKRKVLNESELKEMKIPEEGEILGRVIKLLGSDHVLVKCADDK
                     TRMGRIRGKLKRKIWIRDNDIVTIAPWDFRTEDRGDITWRYTLSQVDWLKENGHLPKD
                     F"
     gene            complement(4800..5075)
                     /locus_tag="VEJ68_03375"
     CDS             complement(4800..5075)
                     /locus_tag="VEJ68_03375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF424 domain-containing protein"
                     /protein_id="HXX05843.1"
                     /translation="MNYQHNRMLNICDAELVGRTLVKSDFSINISKSYFAERIIEENE
                     AEQLLKNASIINMVGKETVALSIRIGIGTEKGVKEIDGIPFLIVFKF"
     gene            complement(5097..5519)
                     /locus_tag="VEJ68_03380"
     CDS             complement(5097..5519)
                     /locus_tag="VEJ68_03380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2 subunit beta"
                     /protein_id="HXX05844.1"
                     /translation="MTKGEYEKLLKKVQDKISETRKVSGSRFELPKVDIMWQGNRTFF
                     RNFAEFPKLLRRDPEKILQYLSKEFATPAQYAGDKAVFVGKKEPHEFTSLFERYVKEY
                     LECPTCKSPDTRVERLNRVNFLVCEACGAKSSLKGQYA"
     gene            complement(5580..5723)
                     /locus_tag="VEJ68_03385"
     CDS             complement(5580..5723)
                     /locus_tag="VEJ68_03385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5679 domain-containing protein"
                     /protein_id="HXX05845.1"
                     /translation="MTTAYCVKCRKKVEIANAKEVKLKNGRPAVKGTCPKCGTNVFRI
                     GKP"
     gene            5979..6476
                     /locus_tag="VEJ68_03390"
     CDS             5979..6476
                     /locus_tag="VEJ68_03390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05846.1"
                     /translation="MATKKGIIITAIILGVISAASFAVWFFPQNRGPGIVVSDYGNEL
                     DSVRERHGLISAEMESNLKSLLNQTLSPDDFINMTQTSSNQVTSLITELIESNPPVEW
                     RESYLNYDEALKKYNDYLTETVTLANKMKGGSSLNNLSDELSTLSSLKNESDSFIIKS
                     NETRP"
     gene            6589..7737
                     /locus_tag="VEJ68_03395"
     CDS             6589..7737
                     /locus_tag="VEJ68_03395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF373 family protein"
                     /protein_id="HXX05847.1"
                     /translation="MSTKETSFPKSETGAKTSRLLVICVDRDDDIGSKAGVLTPIVGR
                     NACIEAAQRLALEDPEDADSNSIFAAVKTFEDLVSKGYQAEVAIVSGTESKGVQADEK
                     IVSQVKSIMERFQANGAVIVSDGEDDETVIPIIQNVLPIVSVKRVVMRASRTVEYSYA
                     VLGRYLKALAFDSKYSKFFLGVPGILLVIGGIATVLGLTKEIFAVLVSILGGAFLIRA
                     FDVDRAWSHWTKPTPAGFIRIFTLVAGILLILASIIAGVSAASPELASTKPDELLKVI
                     LSKEVIGLFVSGMLPFLWMGIGCMFGGSLLSSWFRGSIRSITDILRIIVLITLYPIVS
                     QFTTVMTKDESPFTLIPPLLLGLAVILISASLLFHRYRKKKGGEVLSE"
     gene            7728..8516
                     /gene="uppS"
                     /locus_tag="VEJ68_03400"
     CDS             7728..8516
                     /gene="uppS"
                     /locus_tag="VEJ68_03400"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013482717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl diphosphate synthase"
                     /protein_id="HXX05848.1"
                     /translation="MGIKDKALEVGGFYTLYSKKLEKDIRSGEIPKHIAIILDGNRRW
                     AKRNLVLKLDGHFQGADAVEKLLDWCEELNIKIITLYVLSAENLTRDDDELHYLYGLI
                     NARLEKLYNDPRIHRNQMRIKAIGRVELLPDFLRAVLNKLETVSKDYDNHYLNIAIAY
                     GGQHELVDAVRKIATKIKDGSLEVNDIDKDVIESCLYTSHLPQSSPDMILRTSGEKRL
                     SGFLMWQSAYSELVFMDVYWPEFRKIDLMRAIRTYQKRARRLGK"
     gene            8557..8973
                     /locus_tag="VEJ68_03405"
     CDS             8557..8973
                     /locus_tag="VEJ68_03405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HXX05849.1"
                     /translation="MLEERSAGAILYRESSTGNLYLLLNYPSGHWDFVKGNIEKGEMV
                     KETVVREIQEETGITDVNFVEGFEDKVEYHYQRDGQLVHKEVIFFLAKTKTENVKLSH
                     EHHGFIWLDFNSALKKLTYKTAQNMLKKIKELGFNT"
     gene            complement(8956..>9139)
                     /locus_tag="VEJ68_03410"
     CDS             complement(8956..>9139)
                     /locus_tag="VEJ68_03410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016939459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="orotidine 5'-phosphate decarboxylase"
                     /protein_id="HXX05850.1"
                     /translation="SSKLTKGKCDIYSPGVGTQGGDARKALQEGANYLIVGRTILESR
                     APILEAKKLQMLSIES"
BASE COUNT         2734 a         1710 c         1596 g         3099 t
ORIGIN      
        1 aaccgtaaga ttaattgatg gaattcttta cgtgcgtgga tctagtcatt tttcaaagga
       61 agtaccaatt gaaactactc ctgacatggg aattcatgat ttcaagtata ggaatggagt
      121 actcactctt agaattaaga aattagaagc tctttgattc ttccagcttt tctggaagat
      181 acttgtcggt gatgtttgtg agtccatact ttgagaatgc ttcaagttca gcttttcttt
      241 ttagtttcag aaaaacttcc aattgttttt tccagtttcc ttcttggtat ctaggatctt
      301 tttgtaaatc ataaattctt tttacatcag actcggtcat tggaatggta ggaagtttat
      361 atttttcaat atctgtagcc cacactccaa gccacttggc atcaggtaca gtaagctcac
      421 gaagatgtgc ggcattcgca gaaccagatt tgataaccat agcaatgtgt tccccatata
      481 catccccatc agccaaaatt acaacaggaa gactcaactc ggaatttagt cttcgcagca
      541 agttccttgt tgatcgtggt gcttgacctg cagtatctac aattattgct ttgaatttct
      601 tgtgtacttt ttcttctaca aatcttgtaa aaagacctcc tttttcaatt gcaataacaa
      661 gttctgcact ggtatcaact aattctgcgc tactaaggct aggacctatc aaatatccat
      721 ctggatgatc cgataggtta actcgtcttc cttcatatcc aggaacagta tattctattg
      781 tgagatcccc aaatacacta cttctctcct caggaaatat gtgaaattct tctcgaggag
      841 aggtaaggac agcctctaga tcaactataa tgttatcgga ctcgggttgg tcttcaaaat
      901 caatactaaa ggcctgtgat gagtaataga tatctctaag tgttgatgac ttgccttctc
      961 gtacaagtct attaacaaaa aaagctaacc atgctagttg tgtatatgaa cgaagttgcg
     1021 acatgtttcg agaacttcgt actgcgcttg cgttaccaag tatatactgc ctgattttct
     1081 tgtcataaac aatattattt acagatctgc ttggtattac aaattgagga aattttcctt
     1141 gatcgagatc ttcatagata ttaacaccat gtttttgtag taatgagaga agccgttgct
     1201 ttcttgcctc tgatgttctg gttctagatt tgttcttcaa tttcacttcc catctttact
     1261 agttgtttat aatttggttc ctttttcttt cctgaaagtt ctgtagcaaa ctgagcaata
     1321 agaggcacat attttgagta gagatttgcc ctttttttag ccatgtcagc cattccttgt
     1381 cttgacatgt gaactgcaag ttttcttgcc aggtactgta atgcattttt gagttctctt
     1441 tcaagctcag gtctatcagc aacattttct tttcctacag tcttgtatgg aattctagta
     1501 gaacagatat gagatacaat aacaaggggc ggatctcctt ttaccttata tctactccag
     1561 tccatttcat tgattatctt taaaactaca tcgcttcctt cgtcgtagag aagcggaatt
     1621 ctgttggcaa atctataaac cttcattccg gcagatggaa tgtctccacc atatgcaata
     1681 cccatctcta caataaatgg aaatccagag tatgcagagg cgctacgttg aattacagaa
     1741 gcaaattcgg gattgaagaa tttcattatc ccttttgaca gtggctcctc acctaatgga
     1801 gccaaacagc tgggatcagg tgcaagaaaa tcatcaaatt tctgtaatgc gtcagcaatc
     1861 ttgaccaatt cctcatttgt catactgccg atcctttttt ctggtttgag ttttgcaaat
     1921 tcacaaaact tctctgccgt agttggaccc actctctgaa atctctttgt aagaaatgtc
     1981 aacaatgtat ctccttgaac ggtatttgct agttgtttat agtatggact ttcaggatct
     2041 aattccacta cattagattg tgattgccca aagtcccaat aagtgatttt tttattggca
     2101 acatcgatat catcaattct tatcttctgc aaaccgtcaa aatctagatt cagaaaagac
     2161 atggctgcaa gaacggttct tacaggtctt gaaagatcgg accagcgttt ctgtgctcta
     2221 tcaagtatgt cttttgctga aagatgtttt ttttgtcccc ccagctcttt ttttactttg
     2281 tctatcatgt tgttgtctac ggttggaatc tggtaatgag tatctacaat cattcgtcta
     2341 attgtttcaa catcaatacc atgaggatgt ggtttgatta tagttggtgg tggaggcatt
     2401 tcttttacaa ttcttggaaa atgtaatttt tctccagatg gatcttcaaa tgttatcgat
     2461 gcatatggag tgattagaga tgtttctgat acataatcac gtatttttgt acctgcttta
     2521 gaataatcac cttcaagaac aatacttaca gacagtcctg ttttagcagc ctcctttgtg
     2581 gtatgttttt gtataattgg tttatttttt tgaatatcaa gtaacattac aaactcatcg
     2641 agagtttttc catcccaaca actttttaca gtgacaggtt tgttggtagt tatctgacca
     2701 tatagtattg ccatggtggc gcctaaacca aacattcctc ttgcttgttt aagaccaaat
     2761 ttagaaccat aaagaacagt cccaaatgca tgtggcacat gctttggatc tataccagga
     2821 ccattgtcct tcacagtcag tatgtaatgt tttggatcac cttgttcttg atcaactgct
     2881 ttgatggata gatgtatgtc tggtaggatt ttcttttgat cacaagcatc caatgcgttt
     2941 tccacgaatt ctcttactga tgtgtataac gatctggtag gattactaaa gccagcaaga
     3001 tctctattac gataaaaaaa ttcactagga gaaatttggc taaagacttc cttactggaa
     3061 gacattctca ccctcccaga gctgtaattt ttctatcttt tgtctcctcc ttgattcctg
     3121 aagatcattg taaactttgc catgtgtact accacttgaa agtgaagtaa ttgcattaac
     3181 tgctgatctt aactgttttc cttccccaat tattgcaact gttctaccgt atacacagat
     3241 acttgccccg cttagatcct caacattctt tcgcactctt cctccttccc ctattatcct
     3301 actctttact cttccaatct gagatgaaga cttgcccacg aattctcgta aatctattac
     3361 atgtaaagaa ttttctccct gaagaagtct catagcattg tcagcagaaa atcctctacc
     3421 aatagccaaa acgatctctt ctgccttaaa tggcatcatg tcttcggcat tttcatttcc
     3481 tcgtattgta atctcgccag tttggccatc aatcaataaa gagactgagc atatattttc
     3541 aatttttgtc tttatactac ctgattttcc aattaaaaca cctactctat ctaatggaat
     3601 taggactgtt ttttcaaaga tcattttact atcctcttaa gaatatcaat tggattttcc
     3661 acagtcaatc ccctttttac aaagaatctg gttatatttt taatatctct ttcaagaaat
     3721 tctgttgcat tgggatgtct tatatctact gctgaaccaa aatcaaaaac tatcaatccc
     3781 ttctttgttt taaaaatatt atattcagag aaatccgcat ggataatttt tgatttatta
     3841 tacatttcat ccattattga tatagcattt gtgtaatctt tgtaatcaac ttcagactcg
     3901 accagtgttg gtgctggaac accatttttt cccacaaatt ccatcacaag gacgtttttt
     3961 actaccgcta ttggttttac gcacgaaatt cctgattcat agcaatgttt tagatttgca
     4021 aattcttttt gtgcccaaag ctcaaccaag tttcttgtcc cttttcttat ttttgtaaat
     4081 cgtggatcac ccaatagata aggcattctt tttttgaaat tcaatgtagc aacaagatat
     4141 atttttaatg caagatcttt gccagatgga tcaacagccc agaatgtttt agattcctta
     4201 cctgagccca ctgaaccatt tacataagat attgtaccag agtttttcat atcagaaaca
     4261 gccattgtgg tagctttatc gaaaacctca tcgaagactt tattgctaaa accatctttc
     4321 tgagattttc tttccctgtc cttacctact agtctattct caattctttt tgctaatttc
     4381 tcttgtaatt tatccgacaa tattttcaat tgtatagact tggtaaaatc gattacgcta
     4441 tcagaagtct ttaggcaaat gaccgttttc ctttaaccaa tctacttgag aaagggtata
     4501 tctccatgta atgtctcctc tatcttctgt tctaaaatcc caaggtgcga tggtaacaat
     4561 gtcattatca cgaatccaga tctttctttt taattttcca cgaattcttc ccattcttgt
     4621 cttatcatca gcacatttta ccaaaacatg atcactgcct aaaagtttga taactctacc
     4681 gagtatctct ccttcctcag gtattttcat ttccttaagt tcactttcat ttaatacctt
     4741 acgctttccc aaaattctca gtgaacgatc tgctcagagc gtatataatt gttgtatttt
     4801 taaaatttaa aaactataag aaatggaatg ccatcgatct ctttaactcc cttttctgtt
     4861 cctattccta ttcttattga caacgcaact gtttccttgc caaccatgtt aattattgaa
     4921 gcatttttca atagttgttc tgcttcattt tcttcgataa ttcgttctgc aaagtaactt
     4981 ttactaatat ttatagagaa atcagattta acaagcgttc ttccaactaa ctcagcgtca
     5041 cagatgttta acattctgtt atgctgataa ttcattgatc ttacagcaaa tgccatttac
     5101 gcatattggc cctttagaga tgattttgca ccgcatgctt cacagacaag aaaatttacc
     5161 ctgtttaatc tctctactct ggtatctgga cttttacatg ttggacattc aagatattcc
     5221 ttgacgtatc tttcaaaaag agaagtaaat tcatgaggtt ctttttttcc aacaaatacc
     5281 gctttatcac ctgcatattg cgcaggtgtt gcaaattctt ttgaaaggta ctgcagaatt
     5341 ttttcaggat ctcgtctaag cagttttgga aactctgcaa aattacggaa aaatgttcta
     5401 ttcccttgcc acattatatc cactttagga agctcaaatc ttgaaccaga gactttccta
     5461 gtttcagata tcttgtcttg aactttcttt agtaattttt catattctcc tttagtcaac
     5521 aattatcttc tctaggtgcc acctatatgg atttacttta aaaaagaaga aaatggtccc
     5581 taaggctttc ctattcgaaa aacgttagta ccacattttg ggcatgttcc ctttaccgca
     5641 ggtcgtccat tctttagctt aacttctttt gcattagcta tctcgacttt tttcctgcat
     5701 tttacgcagt atgccgtggt catttcatct ctttacgaag gaagttgtat ttagcaagac
     5761 gctgtaaaat ttatttcact atacgctaga ggctgttaaa tttttacatt gactttctca
     5821 gatcagctat gaagaatttg tattaaaaat actatttttt tgatatttct taggttgatt
     5881 tgatccaact tgaagaaatt ggaagacgcg gaattgaatt tgcaaattgt tctaccttta
     5941 agttatgctt ttaaacggtc ctaaattgag tcatttgaat ggcaaccaag aaagggatca
     6001 taattacggc cataatactt ggtgtcattt cggctgcaag ttttgcggtc tggttttttc
     6061 ctcaaaatag gggaccggga attgttgttt cagattatgg caatgaactt gacagtgtga
     6121 gagaaagaca tggactcatc tctgctgaga tggaatcaaa cctcaagagt ctactcaatc
     6181 aaactctttc acctgatgat ttcatcaata tgactcaaac atcttccaat caagttactt
     6241 ctctcattac ggaacttata gaaagtaatc cccctgtaga atggagagag agttatctaa
     6301 attatgatga ggcactcaaa aagtataatg attacctgac tgagacagtg actttggcaa
     6361 acaagatgaa gggcggatcc tctcttaaca atttgagtga tgaattatct acactttcct
     6421 ccctgaagaa tgaatcagat tcgtttatca tcaaatccaa tgagacaaga ccataaggaa
     6481 attatagata ttatcacctc atataggtca aaattttcct agttgttgta acatctataa
     6541 tagaaattac cttaattaat aggaaatgca atttttgtac ctatacaaat gtcgacaaaa
     6601 gagactagtt ttccaaaaag tgaaactgga gcaaaaacta gtagattatt agtaatatgt
     6661 gtagatagag atgacgacat tggaagtaaa gcaggagtac ttactccaat tgttggacgt
     6721 aatgcttgca ttgaggcagc tcaacgtctt gcacttgaag atcctgaaga tgcagattca
     6781 aattcaatat ttgccgcagt aaagactttc gaggatcttg tgagtaaagg ataccaagct
     6841 gaagttgcca tagtttctgg tacagaaagt aaaggagtcc aagcagatga aaaaattgtt
     6901 tcgcaagtaa aatccataat ggaaagattt caagctaatg gagccgttat tgtctctgac
     6961 ggagaggatg atgaaacagt gatcccaata attcaaaatg ttttgccaat agtttcagtt
     7021 aaaagagttg taatgagggc aagtagaaca gtagaatatt cttacgcagt gttagggaga
     7081 tatttgaaag ccctggcttt tgattcaaaa tattcaaaat tctttcttgg agttcctgga
     7141 attttattgg tcattggagg aattgcaaca gttcttggtt tgactaaaga gatctttgca
     7201 gtactagtta gcattctagg aggagcattt cttatcagag catttgatgt tgatagagca
     7261 tggtcacatt ggacaaaacc aacacctgca ggtttcataa gaatatttac attggtagca
     7321 ggtattctgt taatcttagc ttctataatt gcaggtgtaa gtgctgcaag tccagagtta
     7381 gcttcaacaa aaccagatga gctcctaaaa gtaattttga gcaaagaggt aattggtcta
     7441 tttgtttctg gaatgctacc atttctctgg atgggtatag gatgtatgtt tggaggttct
     7501 ttgctaagta gctggttcag aggtagcatt agatcaatta ctgacatatt gagaattatt
     7561 gtattgataa cactctatcc aatcgtatca caatttacta cagttatgac aaaagatgag
     7621 agtcctttta ctttgattcc accacttctc cttggattgg cagtaatact gatatctgcg
     7681 tcgctactct tccatagata taggaagaaa aagggtggcg aagtactatc ggaataaaag
     7741 ataaggcgct agaggtagga ggattttaca ctctttattc aaaaaagcta gaaaaggaca
     7801 tacgaagtgg agaaattccc aaacatattg caataatact agatggcaat agaagatggg
     7861 ctaaaagaaa tcttgtttta aaattagacg gacattttca aggagcagac gctgttgaaa
     7921 aactcctaga ctggtgcgaa gagctaaata tcaaaataat tacattatat gtattatctg
     7981 ctgaaaattt gacaagagat gatgatgagc tacattatct ttatggtctt atcaatgcac
     8041 gactagagaa attgtacaac gatccacgta tacacagaaa tcaaatgaga ataaaagcaa
     8101 taggtcgtgt tgaattgctg ccagatttcc taagagcagt tttaaacaag cttgaaaccg
     8161 tatcaaaaga ttatgataat cattatctga atatagctat agcatatggt ggtcaacatg
     8221 aattagttga cgccgtaaga aaaattgcga caaaaattaa agatggctcg cttgaagtta
     8281 atgatatcga caaagacgtg atagaatcgt gtctttacac ttcacatttg cctcaatctt
     8341 cgccagatat gatattgaga acctcaggag aaaaaagact tagtggtttc ttgatgtggc
     8401 aaagtgcata cagtgagctt gttttcatgg atgtatattg gccagagttt agaaagatag
     8461 atcttatgcg agctattagg acgtaccaga aacgagctcg cagattaggc aaataaaaaa
     8521 tagaaatact tgtagtttaa gttgtaatat caacacatgt tagaagaaag atcagctggg
     8581 gcaatacttt accgtgaatc atcaacaggt aatctctacc tattattgaa ttatccatct
     8641 gggcattggg attttgttaa aggtaatatc gagaagggtg agatggtaaa agaaacagta
     8701 gtaagagaga ttcaagagga aacaggaata actgatgtga attttgttga gggttttgag
     8761 gataaagtgg aatatcacta tcaacgagat ggccaacttg ttcataagga agtcattttt
     8821 ttcttggcaa agacaaagac agaaaacgtc aaactatcac atgaacatca tgggtttatt
     8881 tggctagatt ttaacagtgc attgaaaaaa ttaacctaca aaactgcaca gaatatgtta
     8941 aagaaaatca aggagttagg attcaatact tagcatttgg agcttctttg cttctaaaat
     9001 tggagctctt gattcaagaa ttgttcgtcc cacaattagg taattagcac cttcttgaag
     9061 tgcttttcta gcatctcctc cttgggtgcc aactcctgga gaatagatat cacatttacc
     9121 tttagtcagt ttactcgag
//
LOCUS       DASPUS010000148         2112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_2000640, whole genome shotgun sequence.
ACCESSION   DASPUS010000148 DASPUS010000000
VERSION     DASPUS010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2000640"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VEJ68_03415"
     CDS             complement(<1..383)
                     /locus_tag="VEJ68_03415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05851.1"
                     /translation="MPLLGRKPSFCTICKKEISHKHKPKSEWQIEGPLCGDCYVTQMK
                     KFYELSLRQKCVVCGIEKDVPEMWEPRYQWDMKGLLCKSCFNKKDEEYKNLKEFCKMC
                     GKKLGMIRYNPKKKWAILGQLCREC"
     gene            complement(455..628)
                     /locus_tag="VEJ68_03420"
     CDS             complement(455..628)
                     /locus_tag="VEJ68_03420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05852.1"
                     /translation="MENNKKDIKYDIVGNCMKELSMPICFTEDQYAKIEQAAKQKGML
                     NASQLIEEALSEQ"
     gene            complement(660..2054)
                     /locus_tag="VEJ68_03425"
     CDS             complement(660..2054)
                     /locus_tag="VEJ68_03425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004421 - hydroxymethylglutaryl-CoA
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006084 - acetyl-CoA metabolic process
                     [Evidence IEA];
                     GO_process: GO:0010142 - farnesyl diphosphate biosynthetic
                     process, mevalonate pathway [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA synthase"
                     /protein_id="HXX05853.1"
                     /translation="MAAGIDDIAIYIPRLFVDARDFASARGMDPDKLQRGLGVSKMAI
                     VDTNQDPACMAANACLRLMERNKISPKDVGRLYVATESSLDESKAMNSYVIGMLEQVY
                     GDGSFGHCGGIECKFACVSGSYALYDNSNWIRAGEAEGKYAMVVVSDIAKYDLNSSGE
                     YTQGAGAVAMLLNDNPRIMTFDPKVTSTSIRNEYDFYRPFGKETPIVRGQYSNLLYMI
                     QVKKALMDYREKALSSGLIKLKEGETILDYIDFVNMHLPYSNMGKKALAYLLRHEWRN
                     LPRWKKIIEKMGMSEPAPKDPRGTIESVLADEEFMEKDHEFTKRFTQTEEFQEAYDSK
                     LASSLIASRVVGNLYTASLYMGFRSCLEFEFQKGTDLEGKRVGFGSYGSGASAMVFSG
                     VMMPTYKEIVRDMNLESEIGNRIKVSLEEYEEIHENKRSLSENILDSKKEFVLVEVQN
                     TPEMRGQRKYIFKE"
BASE COUNT          570 a          457 c          323 g          762 t
ORIGIN      
        1 caacattctc tacataattg ccctaaaatt gcccatttct tttttggatt gtatcgtatc
       61 attcccagtt ttttaccaca cattttgcaa aactctttca aatttttata ttcttcatct
      121 tttttattaa aacacgattt acatagcaag cccttcatgt cccactgata tctaggctcc
      181 cacatttcgg gaacatcctt ttcaattccg catactacgc atttttgtct caaacttaac
      241 tcgtagaatt tcttcatctg agttacataa caatcaccgc agagaggtcc ttcaatttgc
      301 cactcacttt ttggtttgtg tttgtgggag atctctttct tacatatggt acaaaatgat
      361 ggtttacgac ctaagagtgg cacagttcaa atggcatcat aaccattaaa aaagattggc
      421 agattaaaat aaggaaaaat ttgggctgtt ttacttattg ttcgcttaag gcttcttcaa
      481 taagttggct tgcgtttagc attccttttt gctttgctgc ttgttcaatt tttgcatatt
      541 gatcttctgt aaagcaaatt ggcattgaga gttctttcat acagtttcct acaatatcat
      601 attttatatc ttttttgttg ttttccaatt gatcgggtaa aacaagattt ttctaaaatc
      661 tattctttga aaatatactt gcgttgccca cgcatttctg gtgtattttg tacctctacc
      721 aacacaaact cttttttgct atctagaata ttttcgctaa gacttcgttt attctcatgt
      781 atttcttcgt attcttcaag tgaaactttg atcctattcc ctatttcaga ctctaagttc
      841 atgtcccgta caatctcttt gtatgttggc atcataactc cgctaaagac cattgcgctt
      901 gcaccactgc cataagaacc aaatccaact cgttttcctt ccaaatctgt tcctttttgg
      961 aattcgaatt ccaaacaact gcggaaaccc atgtataatg aagcagtata aagatttcct
     1021 acaactcttg atgcaattaa ggagcttgca agttttgaat cataggcttc ttgaaattct
     1081 tctgtttgag tgaatctttt tgtaaattcg tgatcttttt ccataaattc ctcatctgca
     1141 agaactgatt cgattgttcc acgtggatct tttggagctg gttcactcat tcccatcttt
     1201 tcaatgattt tcttccagcg cggaagattt ctccattcgt gtcttaacaa ataagcaaga
     1261 gccttcttac ccatgttact gtatggaaga tgcatgttga caaagtcgat ataatccaag
     1321 attgtctcac cttcttttaa tttgataaga ccgcttgaaa gtgctttttc tctatagtcc
     1381 atcaatgcct tctttacttg aatcatataa agtaggtttg agtattgacc gcgaactatt
     1441 ggagtctctt taccaaacgg tctgtaaaag tcatattcgt ttcttattga cgtggaagtc
     1501 acttttggat caaatgtcat tattcttgga ttgtcattga gcaacattgc cacagcgcca
     1561 gctccttgag tgtattcccc actagaattt agatcatact ttgcgatgtc tgagacaact
     1621 accatcgcat attttccttc tgcttctcct gcccttatcc aattagagtt atcgtataat
     1681 gcgtaagagc cacttacaca tgcaaatttg cattcaatac caccacaatg cccaaatgaa
     1741 ccatcaccat acacctgctc tagcatacca ataacatagg aattcattgc ttttgattca
     1801 tcaagggatg actctgtagc aacataaagt ctacctacat cttttggcga tattttgttt
     1861 ctttccatta atcttaaaca tgcatttgca gccatacatg caggatcttg attagtatct
     1921 acaatagcca ttttagatac gcccaatcca cgctgaagtt tatctgggtc catcccacga
     1981 gcgcttgcaa agtctcgtgc gtccacaaat aatctcggaa tgtagatggc tatgtcatct
     2041 atacctgcag ccaatagctt cacctttggt gttacaaata taaggatttt gagtataaat
     2101 tttgatctca gg
//
LOCUS       DASPUS010000149         2071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1725604, whole genome shotgun sequence.
ACCESSION   DASPUS010000149 DASPUS010000000
VERSION     DASPUS010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2071)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1725604"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..252
                     /locus_tag="VEJ68_03430"
     CDS             <1..252
                     /locus_tag="VEJ68_03430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05854.1"
                     /translation="NPITDEGRGAYPFRTKNPLSGIFNFSSLELCKVNIIMTNTAIII
                     KIKRRQFPLLTHQKPIDDQSADSSNESSSRYPSSKYILA"
     gene            358..1059
                     /locus_tag="VEJ68_03435"
     CDS             358..1059
                     /locus_tag="VEJ68_03435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05855.1"
                     /translation="MGHKHIIRYNDGITSEHVIASASVPINYDYTTLEVESYNDNTAN
                     YEKNIRYFWDGGIMSNTPLTQLVRLHRLYWLKVKGLRDTVPKLDIGIVNVHPVRQDAI
                     PLDHDGVLNRNNDITFSDRTEREQEALLLVSDYVDLARGLINIAKDHGAKENIINDLL
                     NSKTMNHGLAMKPRKYSDILVGQFEIGKIIRVNRKNDQHTISDKVFDFSRKTIKELRE
                     SGYNNTMDLSDVEFS"
     gene            1270..>2071
                     /locus_tag="VEJ68_03440"
     CDS             1270..>2071
                     /locus_tag="VEJ68_03440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05856.1"
                     /translation="MTKIIPPMIETDTDTSKFKNIDNEVIITQISKAAKELNFTNDTM
                     TFINQMISLSLLLRMYDSPLSTTLRAIDEKTQDPSYFIATYFDTSDIDLALWVYRIVR
                     LLSRCILLYDRFFEIGNDRYALLAKKVRRSINELLHDGSDKHHLAYSIDYAFNQFWTF
                     WSFEQIIKRRILGGCAFSYKEIKHFNLSKSSDASIIYARVLDAMLPSFNENVSLILHY
                     NQAFLDIQDDWEDIEDDVKEDMPNVFVMAAVEDIPYQIIKNSSPERIRD"
BASE COUNT          716 a          354 c          391 g          610 t
ORIGIN      
        1 aatcctatta cagatgaagg aagaggcgca tatccattca ggaccaaaaa cccactatca
       61 ggtatcttca atttttcttc gttagaatta tgtaaagtta acatcattat gacaaatacc
      121 gcaattataa tcaagattaa acgccgacaa tttccattac taactcacca aaaaccaatt
      181 gatgaccagt ctgcggattc cagtaacgag tcttcgtcgc gttatcctag ctcgaagtac
      241 atactggcgt agtcatttag attagggtct gtagctgtaa catttgatag ttactgaaca
      301 gaagatggtt cacgaaaatc cgaatatgga aaatatattg ttcagaacgg gaaagaagtg
      361 ggacataaac atattataag atacaacgat ggaattacat cagaacacgt tattgcaagt
      421 gcgtccgtac ctatcaatta tgattatacc actttagaag ttgaaagcta taatgacaat
      481 acagctaatt atgagaagaa tatccgttat ttttgggatg gcgggataat gagcaatact
      541 ccattgacac agcttgttag actacaccga ctctactggt tgaaggtaaa gggattgagg
      601 gatactgttc cgaagttgga tataggtata gtcaacgtcc atccagttag acaagatgca
      661 attcctttgg accacgatgg tgtcttaaac agaaataatg acataacctt ttcagacaga
      721 acagaacgag aacaagaggc tttgttactt gtctcagact atgtcgatct ggcaagagga
      781 ttgataaaca ttgcaaagga tcatggagcg aaagagaata ttataaatga tttattgaat
      841 agtaaaacta tgaaccatgg tctagcaatg aaacctagaa aatattcgga catccttgta
      901 ggacaattcg aaataggaaa aataataaga gtaaaccgta agaacgatca acacaccata
      961 tcagacaaag tatttgactt ttcacgcaaa acaattaagg agttaagaga aagcgggtat
     1021 aacaatacca tggatcttag tgatgtggag ttttcttaga taaagtaaat aattacttta
     1081 catcaatctt cttttgctag attcggttaa tttgacaatt atgatacaaa ttgcgatatt
     1141 ttagtcggtt ctttgattgt ttgagaattt cctaaccata tcgacacatg tgatagctca
     1201 ctacctagac cagcagcagc cgcgatagct aaagattcgc tgtctcacaa tacttataat
     1261 ttcgatgaca tgactaaaat aatacctccg atgatagaaa cggatacgga tacttcaaag
     1321 ttcaaaaaca tcgacaatga ggtcattata actcaaattt ctaaagcggc taaagagctg
     1381 aatttcacta acgatactat gactttcatt aaccagatga tctctttaag tttgttatta
     1441 agaatgtatg attcgccgtt atcaaccaca cttcgagcta tagatgaaaa aacacaggat
     1501 ccttcatact tcattgctac ctactttgat acaagtgata tagacctggc attatgggta
     1561 tatagaatag tcaggctttt atctagatgt attcttcttt acgatagatt ttttgagata
     1621 ggtaatgaca gatacgccct gctggcaaaa aaagtgcgta gatcgataaa tgagttactt
     1681 catgatggaa gtgataaaca tcatcttgct tattctatag attatgcgtt caaccagttt
     1741 tggacatttt ggagctttga gcagattatc aagcgtcgta tacttggagg ctgtgctttc
     1801 tcatataagg aaataaaaca ttttaattta tccaaatcat ctgatgcgtc aataatctat
     1861 gcaagagtct tggatgcgat gctcccgagc tttaatgaaa acgtttcgtt aattcttcat
     1921 tataatcaag cgtttcttga tatacaagat gattgggagg acatagaaga cgatgtgaaa
     1981 gaagatatgc caaatgtctt tgttatggcc gctgttgaag atatccctta ccagataata
     2041 aaaaattcta gccctgaaag gatcagagat a
//
LOCUS       DASPUS010000150         3254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_490200, whole genome shotgun sequence.
ACCESSION   DASPUS010000150 DASPUS010000000
VERSION     DASPUS010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3254)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3254
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_490200"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..216
                     /locus_tag="VEJ68_03445"
     CDS             <1..216
                     /locus_tag="VEJ68_03445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05857.1"
                     /translation="ISYILQIKNSQSQVVYLNWVDDTVDSMSNVNEKIQWTPTEPGIY
                     SAEIYVWDGMNSLIPLVDQKEFKFQVL"
     gene            complement(244..1401)
                     /locus_tag="VEJ68_03450"
     CDS             complement(244..1401)
                     /locus_tag="VEJ68_03450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HXX05858.1"
                     /translation="MIYLDNAASTPMHEKVIEEMIPYFKEQYGNPSSIHKFGRIANAA
                     IQNARKSIADLINAESKEILLTSGGTESNNTAIYGIAHLNKGKHIITSAIEHDAVLEP
                     CKRLEKEGHRITYLPVDRHGLVNTQDVKREISSETCLITIMFANNEVGTIQPIKEIAT
                     IAHENNVVFHTDAVQAIGKVPVDVLELGVDLLSISSHKINGPKGVGALYIRKGITISP
                     LISGGGQEQDLRSGTENVASIVGFGMACKLAKENMNQNIIQFKNLTSRLISRVIKEIP
                     GSTLNGHVENRIPNNVHFTFLGVNGEDLIIKLDENKIAASTGSACSVRTQKASHVLKA
                     MGFSHEQITGSLRLSVGITNTEQEIDETVETLKMVVQELRAVSPYKSKYNF"
     gene            complement(1398..2198)
                     /gene="larE"
                     /locus_tag="VEJ68_03455"
     CDS             complement(1398..2198)
                     /gene="larE"
                     /locus_tag="VEJ68_03455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent sacrificial sulfur transferase
                     LarE"
                     /protein_id="HXX05859.1"
                     /translation="MNNLQKLIDWFDGRGSVLIALSGGVDSALVAYAAHKSLGDSCAA
                     ITADYKTLSQEELESAKKICSEIGIRQIIIEYNELENQDFVKNDMNRCFHCRTELANH
                     LTKVLGDEKADLIVDGTNLDDLKEYRPGIVALQNNGIKSPLVEVGFSKLDVRDCAKKA
                     GLSIYDKPSNSCLASRIPWGNFVTAEKLARIEKSEIIVKHLFGVRQVRVRDLDDRARI
                     EVGENEVKLLADSKKISTLTDSLKELGFKSVFIDPEGYKPGKLNVIAD"
     gene            complement(2195..>3254)
                     /gene="larC"
                     /locus_tag="VEJ68_03460"
     CDS             complement(2195..>3254)
                     /gene="larC"
                     /locus_tag="VEJ68_03460"
                     /EC_number="4.99.1.12"
                     /inference="COORDINATES: protein motif:HMM:NF014072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarC"
                     /protein_id="HXX05860.1"
                     /translation="GIEATHLVLEIKENEHERKGIEIQDCILQLSDKIGLSERAKVLA
                     KESIKSLIKAESKIHGEPLESVHFHEASSIDTVIDIIGSSIALDNLQFLSEEIISTPV
                     AVGGGTLDFSHGKVSNPASAILEIFRGSNIIISGGQAKEELTTPTGASLLVNLVKGCS
                     EFYPPMKVNSIGYGAGSKDFDGFANVLKIVKGESTQQFQQDTVQIIETNIDDVSGEVI
                     GMMIDKLIGKGAKDVTVSPAITKKGRPTNIVSVICDSSDLHTLIDTLVSETGTLGVRY
                     RTSNRYVTPRVTISVPIIIGGKNFTVRCKVVKHNEIVKYCKVEADDIKSCADLLGLSF
                     RDTNELIIAEVKQKIRLK"
BASE COUNT          908 a          677 c          527 g         1142 t
ORIGIN      
        1 atttcataca ttctacaaat aaaaaatagt cagagtcaag tggtatattt gaattgggtg
       61 gatgatacag ttgactcaat gtctaatgta aatgagaaaa ttcaatggac accaactgaa
      121 ccaggaatat attctgcgga aatttacgtc tgggatggta tgaattccct tataccacta
      181 gttgatcaaa aagaattcaa attccaagta ctgtaaatca tagatatgac aacagcgtaa
      241 aattcaaaaa ttgtacttgc ttttgtatgg ggatacagcg cgtaattctt gaacaaccat
      301 ctttaaggtt tcaacagtct cgtctatctc ttgttccgta tttgttattc caacgcttaa
      361 tcgcaaagaa cctgtaattt gttcgtgaga aaaacccatt gccttgagaa catgtgatgc
      421 cttttgagtg cgtacagaac aagcagaacc tgtagatgca gcaattttgt tttcatcaag
      481 ttttatgata agatcctctc catttacacc aagaaatgta aaatgaacat tgtttggaat
      541 tctattttcc acatgtccat taagggtgga acccggtatt tcttttatga ctctactgat
      601 aagccttgaa gtgaggttct tgaattgaat tatgttttga ttcatgtttt cctttgcaag
      661 tttgcatgcc atgccaaatc caacgatact tgcaacattt tctgtacctg atctcaaatc
      721 ttgctcttga cctcccccgg atatgagtgg ggatatcgtt attccctttc taatgtataa
      781 tgccccaaca ccttttggac cgtttatttt atgtgacgat attgaaagaa gatctacccc
      841 aagctctagt acatctactg gaacctttcc aatagcttgg actgcatctg tgtggaaaac
      901 aacattgttc tcatgagcta ttgttgcaat ctctttaatc ggctgaattg ttccaacctc
      961 attatttgca aacattatgg tgataagaca tgtctcgctt gagatctctc ttttgacatc
     1021 ttgggtgttt acaagtccat gtctgtctac aggaagatag gttatcctat gcccctcctt
     1081 ctcaagacgc ttacagggct caagtacagc atcatgctct atagctgaag ttatgatgtg
     1141 ttttcctttg ttcagatgtg ctattccata aattgcagta ttgttggatt ctgtaccacc
     1201 tgaagtcaaa agaatctctt tactttctgc atttatcaaa tcagctatac tttttcttgc
     1261 attttgaatt gcagcattgg caattcggcc aaacttgtgt atggatgatg gatttccgta
     1321 ttgttcttta aaatatggga tcatttcctc gatcactttt tcatgcatag gagtcgaggc
     1381 tgcattatct agataaatca atcagctatc acattcaact tacctggttt gtatccttct
     1441 ggatctatga agacagattt gaatcctaat tccttgagag aatctgttaa ggttgagatt
     1501 tttttcgaat ctgcaagcaa cttaacctca ttttctccaa cttcaattct cgctctgtca
     1561 tccaaatccc gtactcttac ttgccttact ccgaaaagat gttttactat tatctcgctt
     1621 ttttcaattc ttgcaagttt ttctgcagtc acaaaattgc cccaaggaat gcgtgatgca
     1681 agacacgagt tggatggttt gtcgtatatt gaaagaccgg ctttttttgc acaatcccta
     1741 acatccaatt ttgaaaaacc cacttcaact aacgggcttt tgattccatt attttgaagt
     1801 gcaactatgc caggacgata ttcttttagg tcatccaagt ttgtgccatc tactatcaaa
     1861 tcagcctttt catctcccaa tacttttgtt aaatgatttg ctaattccgt cctacaatga
     1921 aaacatctat tcatatcatt tttgacaaaa tcttggtttt caagttcatt gtattctatg
     1981 atgatctgtc ttattccaat ctctgaacaa atcttctttg cagattctaa ttcttcctgt
     2041 gacagggttt tgtagtctgc tgtaatcgca gcacaactat ctccaagaga tttgtgtgcg
     2101 gcatatgcca ctaacgcact atctacacca ccagatagtg ctatcaaaac acttcctctg
     2161 ccatcaaacc aatcaattaa tttttgtaga ttgttcattt caaacggatc ttttgtttta
     2221 cctctgcaat tatcaattcg ttggtatctc taaaagacag gccaagcaaa tcagcgcatg
     2281 atttgatatc atctgcttca accttgcaat atttcacaat ctcattatgt tttacaactt
     2341 tgcatctcac tgtaaagttc ttacctccta tgataattgg aacagagatg gttactcttg
     2401 gagttacata acggttggaa gtcctatatc taactcctaa tgttccagtt tcggaaacta
     2461 gtgtgtcaat taaagtatga agatctgatg aatcacaaat tacagaaaca atattggttg
     2521 gcctaccctt ttttgtaatg gctggactaa cagttacatc ttttgcaccc ttgccaatta
     2581 atttatcaat catcattcct atgacttcgc cagaaacatc atctatgttt gtttcaatta
     2641 tctgcactgt gtcttgttga aattgttgag ttgattcgcc ttttacaatc ttcaaaacat
     2701 ttgcaaaacc atcaaaatcc ttacttcctg ccccgtaacc aattgaattt accttcatag
     2761 gaggataaaa ttctgaacat ccttttacta gattcacaag caggcttgct ccagtcggtg
     2821 tggtcaattc ctcctttgct tgtccgccag aaattatgat gttagaacca cgaaatattt
     2881 ccaagattgc actagcagga tttgatactt taccatgaga aaagtctaga gttccaccgc
     2941 caactgctac tggtgttgag attatctctt cagataaaaa ttgtaaatta tccagtgcaa
     3001 ttgatgagcc tattatgtct atgacagtat caatacttga tgcctcgtgg aaatgaactg
     3061 attctaatgg ctccccatgt atctttgatt ctgctttaat tagcgatttg atactttcct
     3121 tggctaacac ttttgctctt tcagacaatc ctattttatc tgataattgt aatatgcaat
     3181 cctgaatctc tattcccttt ctctcatgct cgttttcttt tatctctaaa accaaatgcg
     3241 tagcttcaat tccg
//
LOCUS       DASPUS010000151         5045 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1581225, whole genome shotgun sequence.
ACCESSION   DASPUS010000151 DASPUS010000000
VERSION     DASPUS010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5045)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5045
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1581225"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            145..489
                     /locus_tag="VEJ68_03465"
     CDS             145..489
                     /locus_tag="VEJ68_03465"
                     /inference="COORDINATES: protein motif:HMM:NF042555.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6659 family protein"
                     /protein_id="HXX05861.1"
                     /translation="MDEKIRYATIFDVNGEIKYSGRREDVTSLLTPAESKKSLQQAIN
                     AWKYRNEYADKIGKGKYVLASYEKIKRITVPLDEEHLIYITTEPDANHDNIIEKTLAL
                     KKEFLHRPEGMP"
     gene            724..867
                     /locus_tag="VEJ68_03470"
     CDS             724..867
                     /locus_tag="VEJ68_03470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05862.1"
                     /translation="MVDDKKKMKSNTEDEYKKALASDDPTNISKEVQEKMAREAIKKF
                     KSL"
     gene            913..1440
                     /locus_tag="VEJ68_03475"
     CDS             913..1440
                     /locus_tag="VEJ68_03475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05863.1"
                     /translation="MSEDLANSIQQLILLGKGDVGRLEYILDLLKKGKLLPSSDRKYL
                     ENILPLYLQSKDVESTQYERKIEELSKEIETMNEKLSRLEETGFEKLGKKAVFLFVTL
                     FVGWNALQSSVVSLLNLDVSNNISQYLFPLNVLANYFNAGSLISFIFILMILAWPFIG
                     AILLVNYVKTRKLHA"
     gene            complement(1437..1991)
                     /locus_tag="VEJ68_03480"
     CDS             complement(1437..1991)
                     /locus_tag="VEJ68_03480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HXX05864.1"
                     /translation="MMQKITAAESFARDKHGNMTRSNGVTPYLDHLQGVVNRLKNIGV
                     SDEEVLAAAWLHDTIEDTDTTFDEIDKRFGSRIAVLVLSLSKDMRLPKDQREKHYVKQ
                     LKESPLETKMIKLCDISANLKDLKNSPWSRTKKIKEIKKKMYYLNVIKTDLSNNKLQI
                     PGIQGIVDGINEVIISYGQKPIII"
     gene            complement(1988..2173)
                     /locus_tag="VEJ68_03485"
     CDS             complement(1988..2173)
                     /locus_tag="VEJ68_03485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05865.1"
                     /translation="MIEVENMWQDTGLDVNDPSYLVEKTMRFELVQKSIMTTFSVFKN
                     IIDEYKKLSLELEKTEE"
     gene            complement(2520..3020)
                     /locus_tag="VEJ68_03490"
     CDS             complement(2520..3020)
                     /locus_tag="VEJ68_03490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05866.1"
                     /translation="MFRNYFYIVVLLFVMCVVIVPKSSFEQSTNTINFNGTNYVIPSS
                     IEGGKIQSISIDSQSKEMKILIQSTSNGVMTIDLPRILIDAKENGSDTHYVVLANNHG
                     VNFKELVTADYRELTITFLNGTTTIEIKGSQIVPEFGPIVPLVLIASIIITIAISQKI
                     KLYNSN"
     gene            3166..3669
                     /locus_tag="VEJ68_03495"
     CDS             3166..3669
                     /locus_tag="VEJ68_03495"
                     /inference="COORDINATES: protein motif:HMM:TIGR04296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEFG-CTERM sorting domain-containing protein"
                     /protein_id="HXX05867.1"
                     /translation="MRWMLYSVMAILAISLTVTPSFAQSASTYNVVDPLSGNSYPINY
                     NLTGGSVKDMSLDTNMTSLVISLQMANDGNLTITLPRTVIDAKAGANDDQYFVLVDGA
                     ETNFQESKTNSDRTLSIPVIAGTEKVEIIGTQVVPEFGPLSYVVLMISIISIVLITTK
                     TRFRLRI"
     gene            complement(3681..3932)
                     /locus_tag="VEJ68_03500"
     CDS             complement(3681..3932)
                     /locus_tag="VEJ68_03500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05868.1"
                     /translation="MKESEYNSQIEQVALLIVRDKISLDENDPKKLQKYYEFARKNFH
                     LENQSAEQLVNEAFLYLKLKTSDSLDPLQHGDEFGAGFS"
     gene            complement(3989..4114)
                     /locus_tag="VEJ68_03505"
     CDS             complement(3989..4114)
                     /locus_tag="VEJ68_03505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05869.1"
                     /translation="MNKEKKKKNEEFLDDDVENDENAEEYLDDEFEDDNTTNKST"
     gene            complement(4118..4960)
                     /locus_tag="VEJ68_03510"
     CDS             complement(4118..4960)
                     /locus_tag="VEJ68_03510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010195496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HXX05870.1"
                     /translation="MVDNIVERDREQPISRYLLEELLPNSLTTSPVVSVRTFDKVSGV
                     AALLPHHLETFTDSLVVTKDDQPVGIIGSLEILEGVLKNPNSAFFEQTTSEQIMNKDK
                     LIILKPRTPLFELLQHWSHTRRAFAITPNQYHGYSVISARKLLEIGASCRTDMRISSI
                     PKKDTILFRKEDTVRDIISLMFENKTRKLILKDTSLFISDRIIIQKITRELNCLKGKD
                     NFLGMKADLFRLDEAKKIPSNLKINEASKIMYDMQSPYLMIEDHVVTPWDIAMALSSD
                     EIYN"
BASE COUNT         1565 a          879 c          825 g         1776 t
ORIGIN      
        1 caataatgca tatgatcaaa acacaggaca attatttcat attttccaac tcaaatattt
       61 tatgtcaatt gggaaacctt tattgtttag aaattacaat attattatac ggattaccaa
      121 gaactatacc aaagcattct gaagatagat gaaaagattc gttacgctac aatatttgat
      181 gtaaatggag agataaaata tagcggacgc agggaagatg tgaccagtct gctaactcct
      241 gctgaaagca aaaaatctct tcaacaggct attaatgcat ggaaatatcg aaatgaatat
      301 gcggataaaa tcggaaaggg aaaatatgtt ttggcttcat atgaaaagat caaacgcata
      361 accgttccat tagatgaaga acatctgatt tacattacaa ctgagcctga tgctaatcac
      421 gacaatataa ttgagaaaac attggcgctc aagaaagaat ttcttcacag acctgaagga
      481 atgccctaac aattctgaat aagattaatt gcaatcgttt gcaatgtaat acatcattct
      541 taaaaacata gaatagatcg atatctcaga gactgtaggt aaggtcgggt taatcaaccc
      601 catccaccga ctttcctacg gtttcatttt aaggctatgc caagcctaat gttgatcaaa
      661 tgtatgacca aataattcat cacaagggga agagatatca atacaatact actattttca
      721 ttattggttg acgataagaa gaagatgaaa tcaaacacag aagatgaata caaaaaggca
      781 ttagcttcag acgatcctac gaatatatca aaagaagttc aggagaagat ggcgcgtgag
      841 gctataaaaa aattcaagtc attataatga actaccattt gccttttatc tgggaaaatt
      901 gtgaataccg cattgtctga agatttggca aattcaattc aacaattaat tcttcttggc
      961 aagggagatg taggtaggct cgagtatata cttgatctat taaagaaagg aaagcttctt
     1021 ccttcttctg atcgaaaata tctagaaaat atactcccgt tatatttaca atcaaaagat
     1081 gtggagtcaa cacagtatga acgtaaaata gaggaattgt ctaaagaaat tgaaactatg
     1141 aatgaaaaac tatctagatt ggaagaaaca ggatttgaaa aattaggtaa aaaagctgtc
     1201 ttcctttttg ttactctttt tgttggctgg aatgcgcttc aatcctctgt ggtatcattg
     1261 ttgaatttag atgtgtcaaa taatatctca caatacttgt ttcctcttaa cgttcttgca
     1321 aattatttca atgctggttc tcttatttca tttattttca ttttaatgat cttggcttgg
     1381 ccttttatcg gcgccatttt acttgtaaac tatgtcaaaa ctcgtaaact tcatgcttag
     1441 ataataattg gcttctgacc gtaggatata atgacttcat taataccatc tacaatgcct
     1501 tggatgccag gaatttgcaa tttattattg ctcagatctg tttttatgac atttaagtaa
     1561 tacattttct tttttatttc ctttatcttt tttgtcctcg accatgggga atttttcaag
     1621 tccttcagat ttgcggaaat atcgcaaagc tttatcatct ttgtttcaag aggtgattct
     1681 tttagttgct tgacatagtg tttttcacgc tgatcctttg gaagtcgcat gtcttttgat
     1741 agtgatagga ctaggacagc aattctacta ccaaatctct tatcaatttc atcaaaggtt
     1801 gtgtctgtgt cctctatggt atcatgtaac caagctgccg ccaaaacctc ctcgtcagaa
     1861 acaccaatat tttttagtct attgactacc ccttgtagat gatctagata aggtgtaaca
     1921 ccattacttc ttgtcatgtt gccatgttta tctctggcaa atgactccgc cgcagttatt
     1981 ttttgcatca ttcttctgtt ttttccaatt cgagactcag ttttttatat tcatcaataa
     2041 tgtttttaaa aacggaaaat gttgtcataa tacttttctg aaccaattca aaacgcattg
     2101 tcttttctac aagataagag ggatcattta catctaatcc tgtatcttgc cacatgtttt
     2161 ctacttcaat cattaacttc tgtaaacgtt tttcatcctc ctctatcttt ttctttaatt
     2221 gcttgatctt gattgatggt atattctaac acccacatct atgaggcatg aggatgatat
     2281 tttaataaaa tgatcaaata atataggata tcactaggga gataacaaag gaaacaaacc
     2341 atgcaatata gaaactgttc ttgtaaatgt ggctgtaaca gggaaatcat gagtcattat
     2401 tatgatcttt gtatcttttg taccctgggg cagcatagaa atgcggtagt agcaccaaat
     2461 gcctagttac aatttgtatg ccactttatc gagcatatca aatgataact ggtacctgat
     2521 caattagaat tgtaaagttt gatcttttgc gaaattgcga ttgtaattat tattgatgcg
     2581 ataagaacca aaggtacaat cggtccaaat tctggtacta tctgtgatcc tttaatttct
     2641 atggtagtag ttccattaag aaatgttatt gtcaattctc tatagtctgc tgttacaagt
     2701 tctttaaaat tcacaccgtg gttattagct aacactacat agtgagtatc actaccgttt
     2761 tccttggcgt caattaatat tctgggtaaa tcaatagtca tgacgccgtt acttgtagac
     2821 tgaattaaga tcttcatttc ttttgattga gaatctatgc taatactctg tatctttcca
     2881 ccttctatgc tacttggtat tacataattg gtaccattga aattgatagt gttagttgat
     2941 tgctcaaatg atgactttgg tacgataact acacacatga caaataataa aaccacgatg
     3001 taaaagtaat ttctaaacaa atcctcggtg acttgattta ttcctaattt aatctagatg
     3061 tgtcgattgc aaagttaaat tttggtttgt tcctttattg gatttgttat aatgcgccga
     3121 tggttctcca gtaaaagtga aatactactc aaattagaca actctatgcg ctggatgtta
     3181 tattcggtta tggcaatact tgcaatttcg ttaacagtaa ctccatcttt tgcccaatcc
     3241 gctagtacct ataatgttgt agatcctcta agtggcaatt catatccaat aaattacaat
     3301 ttaacaggcg gctcagtcaa agacatgtcc ttagacacta acatgacatc tcttgtaatt
     3361 tcattacaaa tggcaaatga tggcaatctg acaataactc ttccaagaac ggttattgat
     3421 gcaaaggctg gtgcaaatga tgatcaatac tttgttttgg tagatggtgc tgaaactaac
     3481 ttccaagagt caaaaacaaa ctccgataga actctttcaa tacctgtaat tgctggaaca
     3541 gagaaagtag agataattgg aacacaagta gttccagagt ttggccctct atcgtatgta
     3601 gttctcatga tatcgataat ttcaattgtt ctaatcacta caaaaactag atttagactt
     3661 aggatttaga attattttta ttaactaaaa ccagcgccaa attcatcccc atgttgaaga
     3721 ggatcaagcg aatctgatgt tttcaatttc aaatacagaa atgcttcatt taccaattgt
     3781 tcagcagatt ggttttccaa atggaaattt tttcttgcaa attcataata tttttgaagt
     3841 ttttttggat cattttcatc aagagatatc ttatcacgta caattaagag cgcaacttgt
     3901 tcaatttgag aattatattc tgattctttc aatatgacta gtcgtcgtta ctatctttta
     3961 agtgattata aaattatcat ttgatggatt atgtcgattt gtttgtggta ttgtcatctt
     4021 caaattcgtc atctaaatat tcttcagcat tttcatcgtt ttcaacgtca tcgtcaagaa
     4081 attcttcgtt tttcttcttt ttttctttgt tcatttctta attataaatt tcatcagatg
     4141 ataatgccat tgctatatcc catggtgtaa ctacatgatc ttcaatcatt agatatggag
     4201 attgcatatc gtacattatt tttgatgctt cattaatttt taaattgctc ggtatttttt
     4261 tagcctcatc taatctgaat aggtccgcct tcattcctag gaaattatct ttgcctttca
     4321 gacaatttaa ctctcttgtt atcttttgta tgatgattct gtcactaatg aacaaagaag
     4381 tatcttttag aatcagcttt ctagttttat tttcaaacat caatgaaatt atatctctta
     4441 cagtatcctc ttttctaaat aggatggtat ctttctttgg tatgctggat atacgcatgt
     4501 ctgtcctgca cgatgctcct atctccagca atttacgtgc tgagattacc gaatagccgt
     4561 gatattgatt gggtgtgatt gcaaaagccc ttctagtatg actccaatgc tgtaatagtt
     4621 caaaaagcgg agttcttggt tttagaatta tcaatttgtc cttgttcatt atttgttctg
     4681 aggtggtttg ctcaaaaaat gcactattag gatttttcaa aaccccttcc agaatctcga
     4741 gagaacctat tattccaaca ggctggtcat cttttgtaac taccaaggaa tctgtaaatg
     4801 tttccaaatg atgcggcagt aatgctgcca ccccacttac tttgtcaaaa gttctcacac
     4861 tcacaactgg tgatgtagtt aatgaatttg gtaatagctc ttccaagaga tatctactaa
     4921 tgggttgttc tctatcacgt tctacgatat tatctaccat gtacgatcat actgattcgt
     4981 ttaagcatta aggcgcttat ttacggtagt tgatgattat caaaactggt tatatctcat
     5041 tatta
//
LOCUS       DASPUS010000152         3897 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_915511, whole genome shotgun sequence.
ACCESSION   DASPUS010000152 DASPUS010000000
VERSION     DASPUS010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3897)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3897
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_915511"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..451
                     /locus_tag="VEJ68_03515"
     CDS             <1..451
                     /locus_tag="VEJ68_03515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05871.1"
                     /translation="KESNNLSDYSDPMVLKTLQSMKQMSSEDNPFDNVENHWTCLDKD
                     GIAAGYVVGADEHEAVRNYVNCAAGGSCFDTPVCILTRGNVRLDVADFIIFLRVKKMP
                     NGPLIGMINPNKWRVDDKQPKSIEEIISTLETSFPSMYEVVNDPLSR"
     gene            885..1802
                     /locus_tag="VEJ68_03520"
     CDS             885..1802
                     /locus_tag="VEJ68_03520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05872.1"
                     /translation="MLTLAYNSVLDWQQKLNQGYGKHPAWNMNFIKVPLNMQSSFDST
                     SCDITMYFKSEPDNPDDQLLEAGVTYPDVTNHTAKIEVYYLGVNLKWSTDEYTQGNDI
                     IYIYTPILYFTGYLASDPQLEDTISHELGHGFGLGHYIVQNDTLYQITQGQRDPPSIM
                     ITTGIGYGVTHYDITPLDVNEMKTIYGNNGFPQQVTTPPANTPTQNATPALTQTTSSI
                     PKWIKNSAKWWSEGTVSDGEFIKSMQYLIQQGILKVPTAQTGSSSSQTIPTWIRINAG
                     WWADGTISDDDFVKGIQYLVASGIVQIHS"
     gene            1926..2396
                     /locus_tag="VEJ68_03525"
     CDS             1926..2396
                     /locus_tag="VEJ68_03525"
                     /inference="COORDINATES: protein motif:HMM:NF037735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD domain-containing protein"
                     /protein_id="HXX05873.1"
                     /translation="MKSVLFLDIDGVMVPFGMVGRDEGIYDHDPFDKGCVKILNTIID
                     QTDCEIIISSTWKHFFDLKQIQEIFQWNGVIKAPIDVTPNSEETIDEEPEDIKCHEIS
                     KWLSKNKTKISHGWCAIDDWDLSFGLQNFVLCHNSRKGLKTKGISEKIIFYLEN"
     gene            complement(2507..>3897)
                     /locus_tag="VEJ68_03530"
     CDS             complement(2507..>3897)
                     /locus_tag="VEJ68_03530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05874.1"
                     /translation="NSNYTRITMISYGNAKLIVTLNQDISKNNGDIYGNHPNVPYIPH
                     IYSSDSSNLSEQTSRKINIEWGTPNNFTLALTNVGNETVTITHPFYGVLGMVVNFENG
                     TSILRDRIVDMPVTTMMEMPEFSASELKQGQSLMQYSSLYWPTNINPNYGYTVPYFSN
                     AIVMSGNYTISSYARFLGDVNGTCSMVYLWSKPIDLIITSPEQNSIIPHNVKKFYQSN
                     ANKTDWDYEHQFLRYLLDTKNLNMLKFHQTDNILTPPWLKNTYQWWLGGQISDNEFIG
                     AIQYLMDHKIITSSSPGPETGIERKNLAINLATNSYFFKQYARGYNYTFQAGGNDCEV
                     FPKSNDTSYSSLPDCMAKYDWLQFDLYQGAIDTGYNEKQVLRVTEDSALTKVLNVTES
                     SPMWNGSVISLNTTTQEQNTASTCNQGYTYDDNYKQCIPLRVAEQSYCKEGYRYDTYL
                     NQCLPIFEASSR"
BASE COUNT         1241 a          688 c          733 g         1235 t
ORIGIN      
        1 aaaggagagt aacaaccttt cagattattc agacccaatg gtattaaaaa cacttcaatc
       61 tatgaagcaa atgtcatctg aagataatcc ttttgataat gtggaaaacc attggacctg
      121 tttggacaag gacggtattg cggcgggtta tgtagtgggc gcagatgaac acgaagcagt
      181 aaggaattat gtaaattgtg ccgcaggcgg gagctgtttt gatactcctg tatgtattct
      241 cactagaggt aacgtgcgtc tagatgttgc tgattttatc atttttttaa gagttaaaaa
      301 aatgccaaat ggtccactaa taggtatgat taaccccaat aagtggaggg tagatgataa
      361 acaaccaaaa tctatagagg aaatcatttc aacactagaa acttcattcc ctagtatgta
      421 tgaggtagtg aacgacccct tatctcggta gaacttacgt tatgatttgt tgctaaatca
      481 gattttccat tcaagttcac cctaaacgaa cccttacagg tctgaaccct cacaggtttt
      541 aatccaagta gattcgaacc ttccagaata atgagtaagt atatgcctat tttgatgaat
      601 tttcaataaa tttgaaacat cataaaagaa tttcaaggaa ttgaaaattg ataagactat
      661 cttttttagt tcaaatgtat ttttcatatt gtgggattgc actgaaaata aaattaatta
      721 cattttgcat ttttgtctgt acaacgtttc tggttctatt ttcctacatc cctcaatcat
      781 ttgccgatgg gtttgaatca ccaatcaaca aactgagtcg caatccaaca atctgtgctt
      841 ttgagccctc acctgaccct caatttccca atctgggaag caaattgtta actctagcat
      901 ataattcagt cttggactgg cagcaaaaac tcaaccaagg ttatgggaaa catccggctt
      961 ggaacatgaa ttttatcaaa gttcctctaa acatgcaatc aagctttgat tctactagct
     1021 gtgatattac catgtatttc aagtcagaac cggacaaccc agatgaccag ttgcttgagg
     1081 caggagtaac ttatccagat gtaactaatc atacggcaaa aatcgaagtc tattatttgg
     1141 gagtcaatct gaaatggagc actgacgagt atacgcaagg aaatgacatc atttacatat
     1201 acacgccaat tctttatttc acgggttatc tagcatctga tccacaacta gaggatacaa
     1261 taagtcatga actgggacat ggatttggtc tgggtcatta tatcgtgcaa aatgatacgc
     1321 tttatcaaat aactcaaggg caacgagatc caccatccat catgataaca actggaatag
     1381 gttatggcgt aactcattat gatattaccc cgcttgatgt caatgaaatg aaaactatct
     1441 atggaaacaa tggttttcct cagcaggtaa caactcctcc ggctaacact cctactcaga
     1501 acgcaacacc tgcattgaca caaacaacta gttcaatacc aaagtggata aaaaattcag
     1561 caaagtggtg gtctgaagga acagtatctg acggagaatt cattaaatca atgcaatacc
     1621 ttattcagca aggaattctt aaagtgccaa cagctcaaac aggttcctcg tctagtcaga
     1681 caataccaac ttggataaga attaacgcag gatggtgggc ggatggaacg atatcagacg
     1741 atgactttgt aaaaggaata cagtatttgg ttgccagtgg aatagtacag atacattctt
     1801 agaatatgtt tccaaccatt ttagattaat ctttctggat tcgtacattt ctagattcag
     1861 gaacaaaaaa tacagttgat tttaactgca aaccttaatt caaaataagg taatacagga
     1921 ttaatatgaa gagcgttttg tttttggata ttgatggcgt tatggttcca tttggaatgg
     1981 ttggtcgaga tgagggcatt tatgatcatg atccctttga caagggttgt gtaaaaatac
     2041 tcaacaccat cattgatcaa accgattgtg aaattataat atcttcaact tggaagcact
     2101 tttttgatct taaacaaatc caagagatat tccagtggaa tggagtaata aaagcaccaa
     2161 tcgatgtgac cccgaattct gaagagacca ttgatgaaga acctgaggac ataaaatgtc
     2221 atgagatttc caaatggctc tcaaaaaaca aaacaaaaat ctcgcatgga tggtgtgcta
     2281 ttgatgattg ggatttaagt tttggtctac aaaattttgt tctctgccac aacagtagaa
     2341 agggattgaa aaccaaggga atatctgaaa agataatttt ctatttagaa aattaaaaca
     2401 atagattctc aaaaataaga tgtatattca taggtcttaa tctaattgga ttcggacttt
     2461 ataggtctga tcctgttgta aaacttggat tagaaattga gatcaattat ctagatgatg
     2521 cctcaaatat tggtaaacat tggtttaggt atgtatcata tctgtagcct tccttacaat
     2581 atgactgctc agctactcgt aacggaatac attgcttgta gttgtcatca tatgtgtatc
     2641 cttgattgca tgtggaagcc gtattttgtt cttgggtagt tgtgttaagc gagattaccg
     2701 atccattcca catcggtgac gattctgtca catttagtac cttagtaagt gccgaatcct
     2761 ctgttactct aaggacttgc ttctcattgt agcctgtatc gattgcacct tggtacaagt
     2821 caaactgtaa ccaatcatat ttagccatac agtctgggag ggaagaataa cttgtatcat
     2881 tagattttgg aaacacctca caatcatttc ctccagcttg aaatgtgtag ttgtatcctc
     2941 ttgcatattg cttgaagaaa tacgaatttg tggctagatt gattgccaag tttttccttt
     3001 ctattccggt ttctggacca ggagaagacg atgtaattat tttatgatcc ataagatact
     3061 gtattgctcc gataaattca ttatcagaaa tctgtccacc tagccaccat tgatatgtat
     3121 ttttcagcca aggcggtgtc aaaatattat ctgtctggtg aaattttaac atattcagat
     3181 ttttggtatc aagtagatac cgtaaaaatt gatgctcata atcccaatcg gttttgtttg
     3241 cattagattg ataaaacttc tttacattat gtggaattat agaattttgt tccggtgaag
     3301 ttattataag atctattggc ttagaccaca aatagaccat gctacacgta ccatttacat
     3361 ctcctaggaa tcttgcatat gatgaaattg tgtagtttcc agacattact atcgcattag
     3421 aaaagtaggg aacagtgtag ccataattag gattaatgtt agtgggccag tatagactag
     3481 aatattgcat taatgactga ccttgtttta attcagatgc actaaactct ggcatttcca
     3541 tcattgtagt tactggcatg tcaacaattc tgtcccttag aatgcttgta ccattttcaa
     3601 aatttacaac catcccaagt acaccataaa aagggtgtgt aattgtcaca gtttcgtttc
     3661 caacatttgt taatgcaaga gtgaaattgt ttggcgtacc ccattctatg ttaatttttc
     3721 tcgatgtttg ttcagaaagg tttgaagaat ccgatgaata aatgtgtgga atgtacggga
     3781 catttggatg attgccatat atgtctccgt tattctttga tatgtcctgg tttaatgtta
     3841 ctattagctt ggcattaccg taggaaatca ttgtaattct ggtgtagttc gaattca
//
LOCUS       DASPUS010000153         2295 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1727357, whole genome shotgun sequence.
ACCESSION   DASPUS010000153 DASPUS010000000
VERSION     DASPUS010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2295)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2295
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1727357"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1551)
                     /locus_tag="VEJ68_03535"
     CDS             complement(<1..1551)
                     /locus_tag="VEJ68_03535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008300931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HXX05875.1"
                     /translation="MSGKRIVLTADRSLMTNYRGNFLYGFIACGPYEVVPEWVFDKVF
                     CPPVETDQITGEAKVAQVGLRRVEAALLQGYNRDEVFIANPDYLEKSIGPDTKVVGIN
                     VMDPLGMAPVTTTMSPEKLSYVAMKFKRMCAKIIQLKKKYNFHVAVGGNGAWELAKTE
                     RMKIHGLDTVVVGEADELALDLFHDLEKGDAPELMHCFVKNIQNIPIIQGPTVNSLIE
                     AMRGCGRGCDFCDVNKRSKKDLPLERLQHEAKINLDYGFDSIWLHSDEMLLYGCDNRE
                     FRPNYDAITELWKGLKSLGARFVGTTHMTFSAVCADPKLFHDISEINGMSNEKWLATN
                     LGVETVAPRMVKKHLGVKTKPFSADEWGWVVREGAKIMNQNHWFPAATLIIGWPDETP
                     DETQYTIDLIEDFKHMNMRGIVAPLLYQDFNEKNSMHFGNLNESQFTLFWKCWEHNLR
                     VINDIIPIILRNKTYGPLMKPVMYGMIKAGTWAIMRYLRGLCKELFNGKLPEDMIEKY
                     ARSRSVNAP"
     gene            1657..>2295
                     /locus_tag="VEJ68_03540"
     CDS             1657..>2295
                     /locus_tag="VEJ68_03540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HXX05876.1"
                     /translation="MGISEPRHIERHQKESSSIRDFVFGFGDGINTSLGLVAGVGGAN
                     ESSSIIILAALVAMFTGAKAMAVQNYLAVRSQRQILQSEIEREKWEMENVPNAEIQEI
                     EDIYKEKGFSGSELENIVKKITSNKKVWLDTMLTEELKLNLEIVGSPLKSAFRMFGAF
                     LIGGILPIIPYFFSNGYVPLLIAIGTSLSASFIIGAFKSKLANLSMIRGGLEM"
BASE COUNT          688 a          451 c          399 g          757 t
ORIGIN      
        1 aggtgcatta actgacctgc ttctagcata tttttcaatc atatcttctg gtagttttcc
       61 gttgaacagt tccttgcaca ggcctcgcaa ataacgcatt attgcccaag ttccggcttt
      121 tatcatgccg tacattacag gtttcatcaa aggaccgtag gtcttattcc tcagaattat
      181 tgggataata tcatttatta ctctcaagtt gtgctcccaa catttccaaa acagagtaaa
      241 ctgcgactcg ttaagattac caaaatgcat tgagttcttt tcattaaagt cttgataaag
      301 tagtggtgca actatacctc tcatgttcat gtgtttgaaa tcttctatca gatctattgt
      361 atattgtgtc tcatcaggtg tttcatcagg ccatcctata atcaaagtgg ctgctgggaa
      421 ccagtgattt tgattcatta tctttgctcc ttctcttact acccatcccc attcatctgc
      481 agagaatggt tttgtcttaa ctccaagatg tttctttacc attcttggag ctactgtttc
      541 tacaccaaga tttgttgcaa gccatttttc attactcatt ccattaattt cagatatgtc
      601 atggaataat tttggatcag cgcacacagc agaaaacgtc atgtgagttg ttccaacaaa
      661 tcttgctcca agtgatttca accctttcca taattctgtt atggcatcat agtttggtct
      721 aaactctcta ttatcacaac cataaagtaa catctcgtca gaatgaagcc agattgagtc
      781 aaatccatag tcaagattga tttttgcttc gtgctgtaat ctttccaatg gcaaatcttt
      841 tttcgatctt ttgttgacat cacaaaagtc acaacctctg ccgcaacctc gcattgcttc
      901 gattagtgaa ttcacagtgg gaccttgaat tataggaatg ttttgaatat tttttacaaa
      961 acaatgcatt agctctggag catcaccttt ctctaaatcg tgaaacagat ccaatgcaag
     1021 ctcatctgct tcgccaacta caacagtatc aagaccatga atcttcattc gttcagtttt
     1081 tgcaagttcc caagctccat ttccaccaac tgcaacatgg aaattgtatt ttttcttaag
     1141 ctgaatgatt ttagcacaca ttcttttgaa tttcattgct acataggaga gtttttctgg
     1201 tgacattgta gtagtaacag gagccatgcc aagaggatcc attacattta ttccaacaac
     1261 tttggtatct ggtccaatac ttttttctaa ataatcagga tttgctatga aaacttcatc
     1321 tcgattataa ccttgtaata gagctgcttc gactctacgt aatcccacct gtgcaacttt
     1381 agcttctcca gtaatttgat ctgtttctac aggcggacag aatactttgt caaataccca
     1441 ttctggaact acctcatatg gcccacatgc aatgaacccg tatagaaaat taccacggta
     1501 attagtcatc aggctacgat ctgcagtaag aactattctc ttgcctgaca tttccttctc
     1561 taattcattt cactacgata taaatcgttt accttaatgc tttattttga aaaaaattac
     1621 tttggacata taaatcggca ttatatactc tacaggatgg gcatttctga accaagacat
     1681 attgaacgac atcaaaagga aagtagctct atcagggatt ttgtatttgg ttttggtgac
     1741 ggtataaaca catccttagg gctagtagca ggagttgggg gagctaatga atcatcaagt
     1801 ataatcatat tggctgcact agtggcaatg tttactggtg caaaagcaat ggctgttcag
     1861 aattatcttg cagtaagatc acaaagacaa attttacaat ctgaaataga acgagaaaag
     1921 tgggagatgg aaaatgttcc gaatgcagaa atacaagaaa tagaggacat ttacaaagaa
     1981 aagggatttt caggtagtga gcttgagaat attgttaaga agatcacatc aaacaaaaaa
     2041 gtctggttag ataccatgtt gacagaagaa ttgaaattaa atttggaaat agttggaagc
     2101 ccgttaaaaa gtgcatttcg catgtttggg gcttttctca taggaggcat actaccaata
     2161 attccatatt ttttctcaaa tgggtatgta ccactcttaa ttgcaattgg aacaagtctt
     2221 tctgcgtctt ttattatagg agcattcaaa tcaaaacttg ctaatctaag tatgattcgt
     2281 ggtggattag agatg
//
LOCUS       DASPUS010000154         2521 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_81251, whole genome shotgun sequence.
ACCESSION   DASPUS010000154 DASPUS010000000
VERSION     DASPUS010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2521)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2521
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81251"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1132
                     /gene="gatA"
                     /locus_tag="VEJ68_03545"
     CDS             <1..1132
                     /gene="gatA"
                     /locus_tag="VEJ68_03545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HXX05877.1"
                     /translation="SRLKSEDGIILGKVNLDEFAMGSTTEFSCYGPTKNPWNTLYVPG
                     GSSGGSGASVSALECLMSLGSDTGGSVRSPASFCSVVGLKPTYGLVSRYGLVSYANSI
                     EQIGPVAKKVEDIAFILNIIAGYDPHDDTTVDKKSDDYAKDLDVGISGKKIGIIEQMT
                     GDGIDKEVLSATNKAVSKLQDLGAQCETISLDAVEHSVAAYYTIASAEASSNLSRYDN
                     LRYGFDFGTEGFEFKAYVAKVRSNFGHEVTRRMLLGAFVLSAGYYGKYYLKAQKVRAM
                     IKSQIDEAFKKVDFLMAPTMPILPFKIGEKIDDPLTLYLLDINTITANLSGIPAISVP
                     FAISNSNLPIGIQLFANSFEEKKLLQAAYDLQQTTSLPEVPI"
     gene            1129..>2521
                     /gene="gatB"
                     /locus_tag="VEJ68_03550"
     CDS             1129..>2521
                     /gene="gatB"
                     /locus_tag="VEJ68_03550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HXX05878.1"
                     /translation="MTKIGLEIHCQLTKLESKLFCQCKADYRNLSPNSNICPICIGLP
                     GSLPMLNRRAVEKAAMISLALGCKIPEKIGFFRKNYFYPDLPKNFQITQYNAYGPTSI
                     GSEGKVEVGGKEISIRRIQLEEDPGRLVYEGSSEKTQITLVDYNRAGTPLVEIVTEPD
                     FENPRQVRIFLNMLADLVENLGVADPYLEGAMRVDGNISVEKGNRVEIKNVGSFRDIE
                     KALHFEITRQQSLVERNIPIPAETRHWDEARKITVSSRSKEEEQDYRYLPEADIPIIQ
                     ISTNAISILQKTMPESIAAKKERYIKRYGVPPQVAEVLSSDKFYSDLFEQAHNEKNAK
                     EVANIITTDLMGFADTREKKMELKISPKHISDLADGIVNNKITRNSGKQALQEMVKTG
                     KSFSEIIGLLDLSHVSDTISIEKIVDEVFKEEEKAVLEAKQNPDAVNYIVGKVMRKTK
                     GKVDPSITLEIIRK"
BASE COUNT          875 a          427 c          531 g          688 t
ORIGIN      
        1 ctcaagacta aaatctgaag atggtataat cttaggaaag gtaaacttgg atgaatttgc
       61 gatgggatca actacagagt ttagttgtta tggtccaaca aagaatccat ggaacacact
      121 gtatgttcct ggaggatcat caggaggaag tggtgcctct gttagtgcac ttgaatgtct
      181 catgtcttta ggttcagaca ctggcggttc tgttagaagc ccagctagtt tttgttcagt
      241 ggttggcttg aagcctacct atgggcttgt tagtcgatat ggattggtat cttatgcaaa
      301 tagtatagag caaataggcc ctgtagcaaa aaaggtcgaa gacattgcat ttatcttgaa
      361 tattattgca ggttatgatc cccatgacga tactactgtg gataaaaaaa gtgacgatta
      421 tgcaaaagat ttggatgttg gaatatctgg aaagaaaatt ggaataattg aacagatgac
      481 tggggatgga atcgataaag aagtattatc tgccacaaat aaagcagttt caaaacttca
      541 agaccttggt gcacaatgtg aaacaatatc ccttgatgca gttgagcatt cagtggctgc
      601 gtattataca attgcatctg cagaggcaag cagtaatctt tcaagatatg ataatctaag
      661 atatggattt gactttggaa cagaagggtt cgagtttaaa gcatatgttg caaaggtgcg
      721 aagtaatttt ggacacgaag ttacgcgaag gatgttactt ggagcctttg tattgtctgc
      781 aggatactat ggaaaatact atctaaaagc acaaaaggtc agagccatga taaaatctca
      841 gatcgatgag gctttcaaga aagttgactt tctcatggct ccgacaatgc ccattcttcc
      901 ttttaaaata ggcgaaaaaa tagacgatcc actgacattg tatcttcttg atatcaatac
      961 aattaccgca aacctctctg gaattcccgc aatttctgtt ccatttgcaa tatcaaattc
     1021 aaacttgcca ataggaattc aattgtttgc aaattcattt gaggagaaaa aacttctcca
     1081 agccgcatat gacttacaac aaacaacatc ccttcccgag gtgccaattt gacaaaaata
     1141 ggtcttgaga ttcactgtca gctaacaaaa cttgagagta agctcttttg ccaatgtaaa
     1201 gcagattatc gaaatctctc tccaaattcc aacatttgtc caatttgtat tggtcttcca
     1261 ggctctcttc caatgttaaa cagaagagct gtagagaagg ctgccatgat ctcacttgcc
     1321 ttaggatgta agattccaga aaagattggt ttttttagaa agaattattt ttatccggat
     1381 cttccaaaaa atttccaaat aacacaatac aatgcctacg gacctaccag cataggatca
     1441 gaaggcaaag tagaggtagg tggaaaggag atcagtattc gaagaattca actcgaagaa
     1501 gaccccggga gactagttta tgaaggaagt tctgagaaaa ctcagataac acttgtagat
     1561 tacaacaggg caggaacacc actagtcgag atagtgactg aaccagactt tgaaaatcct
     1621 cgacaagttc gtatattttt aaatatgctc gcagaccttg ttgagaacct tggggtggca
     1681 gacccatatc ttgaaggtgc gatgagggtt gatggtaaca tatcagttga gaagggtaac
     1741 agagttgaaa tcaaaaatgt ggggtctttt agagatattg aaaaagcact tcattttgag
     1801 ataacaaggc aacaaagtct cgttgaaaga aatattccca tccctgctga aacacgacat
     1861 tgggacgaag ctcgtaaaat tacagtttct tctagatcaa aagaagaaga acaggattat
     1921 agatatctgc ctgaagcaga tattccaatt attcaaataa gtactaacgc tatatctatt
     1981 cttcaaaaga cgatgccaga aagcattgcg gcaaaaaaag aacgatacat caaaaggtat
     2041 ggcgttcctc ctcaggttgc agaggtttta tcttcagaca aattttattc tgatttgttt
     2101 gaacaagctc ataatgaaaa aaatgccaaa gaggttgcaa atatcataac tacagatttg
     2161 atgggttttg ccgacacacg agagaagaaa atggaattaa aaatctctcc taaacatata
     2221 tcggaccttg ctgatggaat agtcaataat aaaattacaa ggaattcagg aaaacaagcg
     2281 ctgcaggaaa tggtaaagac tggcaagtca ttctctgaaa taattggatt attagacttg
     2341 agtcatgtta gtgatacgat atctattgaa aaaattgtag atgaagtatt caaagaagaa
     2401 gaaaaggcag ttttggaagc taagcaaaac ccagatgcag taaattacat tgtaggaaag
     2461 gtgatgcgga agacaaaggg caaggtagac cccagtatca cacttgaaat tataagaaaa
     2521 a
//
LOCUS       DASPUS010000155         3687 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1582678, whole genome shotgun sequence.
ACCESSION   DASPUS010000155 DASPUS010000000
VERSION     DASPUS010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3687)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3687
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1582678"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            537..929
                     /locus_tag="VEJ68_03555"
     CDS             537..929
                     /locus_tag="VEJ68_03555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05879.1"
                     /translation="MDYNKPTLPKESKSKRKKMLFYAAAGGAAISLAIIVLFVIPANT
                     PQYSLSVEPRNEMVMGAGMMNRVYLTNTGSEPLTNIKLNWGSTSDNLPILNPGERVMF
                     SPPSTATMVTVTADHGISIMKSLTNSMS"
     gene            937..1728
                     /locus_tag="VEJ68_03560"
     CDS             937..1728
                     /locus_tag="VEJ68_03560"
                     /inference="COORDINATES: protein motif:HMM:NF017831.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF929 family protein"
                     /protein_id="HXX05880.1"
                     /translation="MPTKKLKIKNIVFVIAIITISGILVFYMATNNSQTNSNSANQAL
                     VGQTLSPELYQQISNVNYSTISLVGSGTALHFNHISGDQIIDTKKPVVLYVGANYCPY
                     CAAERWALVVALSKFGTFSNLSYMLSSPTDVYPNTPTISFHGATFTSKYIDFQSVELQ
                     DRSGSTLETITPEQQNVFSTYGQNGAIPFVDIANQYVFTGSQFMPSTLVGLSWGQIGT
                     KINDPNSDIAKGVDCAANIIISDICKSTNYNPTDVCSQSFVKPDS"
     gene            1734..2201
                     /locus_tag="VEJ68_03565"
     CDS             1734..2201
                     /locus_tag="VEJ68_03565"
                     /inference="COORDINATES: protein motif:HMM:NF019499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin K epoxide reductase family protein"
                     /protein_id="HXX05881.1"
                     /translation="MNKASATFLGLVIIGICISSYLVYYHYASRAGAKGWCNINDQIN
                     CKNVIQSRYSEIFGVPLAAFGLVWFSVSGIFHYFRESSVAFLGPNAPFYLFVWSSIGV
                     VSVIVLVFLEIFSVGSICLLCTACHIMAVGIFAISHTFLKKPLSDYVRDLFYY"
     gene            complement(2291..3016)
                     /locus_tag="VEJ68_03570"
     CDS             complement(2291..3016)
                     /locus_tag="VEJ68_03570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HXX05882.1"
                     /translation="MENKDSAEKDAKMTNEKEIAVADKIIQIVVDESSGISLDDFQLN
                     DKKILSVLNQDSDVADNQYTFNGLVRKLGIHQQSLSRALRRLEDACLIQRTESGYKLS
                     KNLRLILVKKSRIDLEHLSKKSSKQHLQFTQILQLYIPITAKVDEVVNQLVGKWFGNL
                     RWIGLVEGDGGYVLQWANSDKFLVNLKIVSRYATIESNAASEKDKADSMISAHRIFEQ
                     ITKVLKVESEKPHESNNFYNQYN"
     gene            3091..3330
                     /locus_tag="VEJ68_03575"
     CDS             3091..3330
                     /locus_tag="VEJ68_03575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05883.1"
                     /translation="MDRDLITSLSFPNKSDLYKILNLFFLDLAFLEFNLSLLLQHGQR
                     CTGNKLTSTNIPQIEHGLCPATNLYPPVGRFAAYL"
     gene            3498..>3687
                     /locus_tag="VEJ68_03580"
     CDS             3498..>3687
                     /locus_tag="VEJ68_03580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05884.1"
                     /translation="MQRGYGILIAGACMLVFGHFLSQWVIDSIPTINPSHSTMLSDAQ
                     YHMLSWSNQLSVISQTGII"
BASE COUNT         1114 a          704 c          644 g         1225 t
ORIGIN      
        1 acactgtggc ggagatgctc caaatgctga agtcatcatt tgacctggcc ctgaactaaa
       61 gccaagcgaa gctacaattg taatagctac aattgcacct agaagtaatc ttgtcttcat
      121 tgataaccaa ttttataaaa aatatttgaa gaatatggta cattcgtgag atgtactaat
      181 actgaatgat catctaatgt aaaactgcaa aatgcatatg cggtagctga aagcactgta
      241 acagagataa aataatgacc ttgtcatgca tgacaaaata atgttaatgt aaaatccgtg
      301 tgttttttcc cagatagatt gtttaccata tcatcacaaa agaactcact aattctaata
      361 gtggtcaaca ctagattgtt acagatgatt gagaacacaa tgaataggta aggtccttat
      421 tgataccaag taaactgtgt tctcaatttc atgtaccaag ataaagtttt aaatttactg
      481 gtacaacaat cgattgtacc actcaaatta taacaattaa acaattattc tgtcacatgg
      541 attacaacaa gccaacactg ccaaaagaat ccaagtctaa gaggaaaaag atgttatttt
      601 atgccgcagc tggtggagcc gcaatttccc tcgcaataat tgttttgttt gtaattcctg
      661 caaatacacc acaatattcc ttatctgtag aaccaagaaa tgagatggtt atgggagctg
      721 gtatgatgaa cagagtatac ctaacaaata caggttcgga accgctaacc aatatcaaac
      781 tcaattgggg aagcacctca gataatttgc ccatacttaa tccaggcgag agggtgatgt
      841 tttcacctcc ttctacagct accatggtaa cagtaactgc agatcatgga ataagcataa
      901 tgaaatctct cacaaattct atgagctagc acaaacttgc ctaccaagaa attaaaaata
      961 aagaacattg tatttgtcat tgcaatcata acaatttctg ggatacttgt tttttacatg
     1021 gctacaaaca attcacaaac caattcaaac tctgccaacc aggcattagt tgggcaaacc
     1081 ctgagcccag aactttatca gcagatatca aatgtgaatt attctaccat ttctcttgtg
     1141 ggaagtggaa cggcacttca ctttaatcat atttcaggcg accaaattat agatactaaa
     1201 aagcctgtgg tgctttatgt aggagcaaat tattgtccat attgtgccgc agaaagatgg
     1261 gctctagtgg ttgccctttc aaaatttgga acctttagta acctaagtta catgctttct
     1321 tctcctacag atgtctatcc aaatacaccc accatttcct ttcacggggc aacgttcaca
     1381 agtaaataca tagattttca gagtgttgag cttcaggaca gatctggaag cacgttggag
     1441 actatcaccc ctgaacaaca aaatgttttt agcacttacg gacagaacgg tgcaatcccg
     1501 tttgttgata ttgcaaatca atatgtgttt acaggttcac agtttatgcc atctacactt
     1561 gtagggttga gttgggggca gataggcaca aaaattaatg acccaaatag tgacatagcc
     1621 aagggagtag attgtgctgc aaacatcata ataagtgata tctgcaaatc tacaaactat
     1681 aatcccacag atgtctgttc acagtcgttt gtcaaaccgg atagttgatc tcattgaata
     1741 aagcatctgc gacatttcta ggccttgtta taatcggcat ttgcatttct tcgtatttgg
     1801 tttattatca ttatgcttca agggcgggag ctaaaggctg gtgtaacatc aacgaccaga
     1861 tcaactgcaa aaatgtaatt cagagcagat attcagaaat tttcggcgta cctcttgcag
     1921 cgtttggatt ggtttggttt tcagtatctg gaatatttca ttattttaga gagtcttcag
     1981 ttgcattcct tggcccaaat gctccattct atttgtttgt ctggtcttca ataggagtag
     2041 tatctgtaat agtcctagta ttcttggaaa tattttctgt gggttcaatc tgtctacttt
     2101 gtactgcctg ccacatcatg gcagtgggca tatttgcaat atcacatacc tttttgaaaa
     2161 aaccactttc agattatgta agagatctat tttattacta aggggcataa caaccattga
     2221 aggatttttg atttggttat ttgaggttca gaaattttgg taagaaaatg tgaaaaatct
     2281 aattgttttc ttaattgtat tgattgtaaa agttgttact ttcgtgaggt ttttcagatt
     2341 caacttttag tacttttgtt atctgttcaa atatcctgtg agcgcttatc atagagtctg
     2401 ccttgtcttt ttcacttgcg gcattgcttt ctattgtggc atatcttgag acaatcttca
     2461 agtttaccag aaacttgtca ctgttggccc attgtaacac atatccacca tctccttcaa
     2521 ccaatcctat ccagcgtagg ttgccaaacc actttccaac caattggttt accacttcgt
     2581 cgactttggc agtaattggg atatacaatt gaagaatctg tgtaaactgg agatgttgtt
     2641 ttgatgattt tttagataaa tgttcaagat ctattctgga tttcttgact agaattaatc
     2701 gaaggttttt gcttagcttg taaccagatt ctgttcgttg tatgagacaa gcatcttcta
     2761 atcttcgcaa tgctcttgat aggctttgtt ggtgtattcc taattttctt accaatccat
     2821 tgaacgtata ctggttatct gccacatcgc tatcttgatt taaaacagac aaaattttct
     2881 tatcatttaa ttgaaaatca tcaagagata ttccagagga ttcatcaacc acaatttgta
     2941 ttattttgtc agctactgca atctccttct cgttagtcat tttcgcgtct ttttcagcgg
     3001 aatctttgtt ttccattagt gtaacattcc attagtcttt ttacttattt aagcttaggt
     3061 agtattacca ttggatcctt tacttttgat atggatagag atctcattac ctcactatct
     3121 tttccaaata aatcagactt gtacaaaata ttgaatctgt tttttctaga tcttgcattt
     3181 cttgagttca atcttagttt gttgttacaa catggacagc ggtgtacagg aaacaagttg
     3241 acgtctacaa atataccaca aattgaacat ggtctttgtc ctgccacaaa tctatatcct
     3301 ccggttggcc gttttgctgc atatctgtaa cagattcctt tacatttcaa aattacaatc
     3361 tcccttttca agcctaggag gctcgttcat catcttatga taattatgct acaataaagc
     3421 gactaattaa caaagaacct agtcacacca tgtcccagtt gaagaatttt taagatctgt
     3481 acatacgata ctatctcatg caacgtggat atggaatttt aattgctggc gcatgcatgt
     3541 tggtctttgg tcattttcta tcgcaatggg tcatagacag catacccaca atcaatccgt
     3601 cgcattctac catgttatca gatgcacaat atcacatgtt atcttggagt aatcagttgt
     3661 ctgtaattag tcaaactggt attattt
//
LOCUS       DASPUS010000156         2656 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_917483, whole genome shotgun sequence.
ACCESSION   DASPUS010000156 DASPUS010000000
VERSION     DASPUS010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2656)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2656
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_917483"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..900)
                     /locus_tag="VEJ68_03585"
     CDS             complement(160..900)
                     /locus_tag="VEJ68_03585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05885.1"
                     /translation="MIRNWHVLLGLFLITGITTSPFTNVFGQETSIPSWVKTNTFAWG
                     KGQTSDYYFIQSLQWLIDQKILKTPATDNSFNFDPILKLATLESAVGNETYAYDAELS
                     LFENGSITTQNMLNISDNHLQTMINLQGQFNQLEPPLSFKPSFQFYTLSVQSELESDK
                     LLKDWITTNNESTRQKSDAIFNDSQNYETQANQMFAMEQSTYHTSPSWIKNTATWWGE
                     GQISDAEFIQTMQWLIDNNIFKITPSNS"
     gene            complement(997..1557)
                     /locus_tag="VEJ68_03590"
     CDS             complement(997..1557)
                     /locus_tag="VEJ68_03590"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HXX05886.1"
                     /translation="MSQTVEKTRLRKQLLDQRESLSLDFIKISSGKIRENLRKIDYYR
                     SAQSIGAYFAIGSEVRTQDILQEILNSGKELALPKVEKKDLVFKKISGFSDLEIGNFS
                     IMEPKDRCETVKRLDVILAPVIAVTRDGYRLGYGFGYYDRYLHGKHSKKIALSYYKQV
                     VKTIPYDDHDVKVDCIATEDEIIYVK"
     gene            complement(1541..2410)
                     /locus_tag="VEJ68_03595"
     CDS             complement(1541..2410)
                     /locus_tag="VEJ68_03595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 5,10-methylenetetrahydrofolate
                     dehydrogenase/5,10-methenyltetrahydrofolate
                     cyclohydrolase"
                     /protein_id="HXX05887.1"
                     /translation="MSGQKIDGIQVANSVKERVKAAVEELKKEKIEPCLATILVGDDS
                     ASASYVSSKQKDCAEVGILTKDHRLPGTFSQQEMNSLLDLLNNDNTVHGILVQLPLPQ
                     QLDEFATVNKISPIKDVDGLTPYNMGLLVSGRALLKPCTPSGIMELLDFYNIDISGKN
                     AVIINRSNLVGKPLYHLMLEKNATVTTCHSKTKNLKEICLDADIIVSAVGNRSRFTLT
                     ADMVKEGAIVIDVGTSRQDGKLVGDVDYDNIIKKASYATPVPGGVGPMTRAMLLKNTV
                     TSASISKGFVTNR"
BASE COUNT          775 a          496 c          480 g          905 t
ORIGIN      
        1 actagaagat gcaatctcaa acgtatatgc aagaataggg aaaattagtt ggcctagcaa
       61 atattgtcgc actgatatcg gaaaaaaagg cctaacttta cataaataaa aagactgaat
      121 gcaatctcgt aatgtagttc ggtctgattt gttagaattc taggaattag aaggtgtaat
      181 tttgaatatg ttgttgtcaa tcaaccattg catcgtttga ataaattctg catcacttat
      241 ctgtccttcg ccccaccatg tagcagtatt tttaatccaa gatgggcttg tgtgataggt
      301 agattgttcc atagcaaaca tttggtttgc ctgagtttca taattctgag aatcattaaa
      361 aatagcatct gatttttgcc gtgtagattc attatttgtg gttatccagt cttttagtaa
      421 tttgtcactc tccaattccg attgtacaga aagtgtataa aattgaaatg aaggcttgaa
      481 acttaatggt ggttctaatt gattaaactg accttgaagg tttatcatgg tttgtaggtg
      541 attatctgaa atattcaaca tgttttgtgt agtaatggaa ccattctcaa aaagtgataa
      601 ctctgcatcg taggcataag tttcattacc aactgcgctt tctaatgtag ccagttttaa
      661 tatcggatcg aaattaaaac tgttgtccgt ggcaggagtt ttgagaattt tttggtcaat
      721 tagccattgc aacgactgga taaaataata atcacttgtc tgaccttttc cccacgcaaa
      781 tgtattggtt ttaacccaac ttggaataga tgtctcttgt ccaaacacat tggtaaaagg
      841 acttgttgta atgcctgtta tcaaaaacaa gcctaacaaa acatgccagt ttctaatcaa
      901 ttctcaatat gcctaaatga ctcttaaaaa gtgtaaacca tttcagcaga ttgacgattt
      961 agtcaatttc aagtttacaa tgacatgatt tcttttttac tttacgtaaa taatttcatc
     1021 ttctgttgcg atacaatcca cctttacatc atgatcatca tatgggattg tttttacaac
     1081 ctgcttgtaa tatgacaatg caatcttttt ggaatgtttg ccatgtaggt atctatcata
     1141 atacccaaaa ccatatccta gtctgtatcc atctcttgtt acagcaatga ctggtgccaa
     1201 tatgacatca agtcttttga ctgtctcgca acggtctttt ggctccatta tggaaaagtt
     1261 tcctatttca aggtcagaaa aaccagagat ctttttgaag acgagatctt ttttctcaac
     1321 ctttggcaaa gctagttctt ttcctgaatt tagtatctct tgcaaaatgt cttgtgttcg
     1381 aacctcgctt ccaattgcaa aatatgctcc aatgctttgt gcactacgat aataatcgat
     1441 ttttcgtagg ttctcccgaa tcttgccact agaaattttt ataaaatcaa gtgagagtga
     1501 ttctcgttgg tctaagagct gtttgcgcag ccttgttttc tcaacggttt gtgacaaatc
     1561 ccttactaat tgaagctgaa gtgacagtgt tttttaaaag catcgctcta gtcatgggtc
     1621 ctaccccgcc aggcacagga gttgcataag atgccttttt gataatgtta tcataatcta
     1681 catctccaac aagtttgccg tcttgcctac ttgtgccaac atctatgaca atggctcctt
     1741 cctttaccat gtctgctgtt agtgtaaacc ttgatctatt gcctactgca ctgactatga
     1801 tatcagcatc aagacatatc tctttgagat tttttgtttt agagtggcat gttgttacag
     1861 tagcattctt ctctagcata agatggtaca atggcttgcc tacaagatta cttcggttta
     1921 ttattactgc attttttcct gaaatatcta tattataaaa atcaagtaat tccataattc
     1981 cagacggggt gcatggtttt aggagcgctc taccagagac tagaaggccc atgttgtatg
     2041 gtgtaagacc atcaacgtct tttattgggg agatcttgtt tacagttgca aactcatcta
     2101 gttgttgggg cagaggcaac tggaccagga tgccatgaac ggtattatca ttatttaaca
     2161 aatcaagtag gctattcatc tcttgctggg aaaatgtccc tggtaatctg tgatcctttg
     2221 ttaaaatgcc gacttctgcg cagtcttttt gcttacttga gacataagaa gcagatgctg
     2281 aatcatctcc tacaagtatg gttgcaaggc atggctcaat cttttctttt ttcagttctt
     2341 ccaccgcagc tttgactctt tccttgacag aatttgcaac ttggatacca tctatctttt
     2401 gtccactcaa acatactttg atattttttt gggtatttaa tccttggaac attaattatc
     2461 tacattggta aagaatcatc aatgaatcgc agggaagcag aagatcatat tagaacaaca
     2521 cttgacaaaa taaaaaaaca tgagatagaa ctgcatcaag gatgtgtggc atgtcatatt
     2581 atattttcca tcaaacaaaa atcaggaagg tcagagcaag atgcagccga tattgtatcg
     2641 gaggtcctta cacatg
//
LOCUS       DASPUS010000157         3239 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1451010, whole genome shotgun sequence.
ACCESSION   DASPUS010000157 DASPUS010000000
VERSION     DASPUS010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3239)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3239
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1451010"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1342)
                     /locus_tag="VEJ68_03600"
     CDS             complement(<1..1342)
                     /locus_tag="VEJ68_03600"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HXX05888.1"
                     /translation="MFNRLLIFSLCFILFTLFFSTSTEEKSENTLQPSIQLVGDNAAR
                     LDGFEGQGVKIGIIDTGIDFDHPDLFGFGLQGKVVGGYDFVSGNEKPLDTNGHGTEVA
                     GIIAADGNFSGMAPKSKLFAYKVSNTGDAVSSDFIVNGIQQAIQDGVNVINISLGINK
                     TNDQIDTAIDNAVSKGIVVVVAAGNNGPQEGTIGSPGKDIDAITVGASYNNITSSQVA
                     TLEVGKKQYQVLPMVGTNVLASPVEGKIIYGSYGRTSDLEKLNVKGNILLEERGSNVT
                     GEKIYFSLKEKNAEEMGAKGLIVFNNQSGIFFGQLVGQNKTTTFMPKIPVISMSYEDG
                     LALKSMLAENVTGRLNIFYHPDVVAPFSSRGPVSPFYIKPDLVAPGVFVNSTTLNGMY
                     NLTSGTSVAAPHVTGAVALILQKHPELDPDSVTSLITTTTDPATDQYGKPLPIDA"
     gene            1418..2035
                     /locus_tag="VEJ68_03605"
     CDS             1418..2035
                     /locus_tag="VEJ68_03605"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HXX05889.1"
                     /translation="MAKYELPKLPYAYDALEPHIDARTMEIHHSKHHQAYTDGLNKAL
                     ETLSSDLQNMELTKLLTSLDKVPEATRGAVNFHGGGYDNHTLFWNNMKPSGGGNPGGK
                     LADAINSVFGSFDSFKEKFTKDTIAIQGSGWGWLTFNPQSKKVEFTTMPNQTSPRTKG
                     LIPLMGLDVWEHAYYLKYQNKRADYVAAWWNAVNWDEVDKRLAKA"
     gene            2133..2555
                     /gene="pfdA"
                     /locus_tag="VEJ68_03610"
     CDS             2133..2555
                     /gene="pfdA"
                     /locus_tag="VEJ68_03610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prefoldin subunit alpha"
                     /protein_id="HXX05890.1"
                     /translation="MSEEQAQALMQQLQALEGYMADLLQREEAVMRLLQEAAGAVESM
                     KALSGDKELETLIPVGLGAYVKAKVEPNQKMIVNIGAGASMEQDKASTINYMESRIKE
                     LEIAFQQIAAQRQEVAMRLEQGQHEMNKLIQSSRGSIQ"
     gene            2567..>3239
                     /locus_tag="VEJ68_03615"
     CDS             2567..>3239
                     /locus_tag="VEJ68_03615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HXX05891.1"
                     /translation="MFEKLRNAFSSAVKSLGEKELKEKDIDEVLFELEVALLESDVAT
                     EVIDSIKSDLKKQLIGTTVQKDTIAEFVKQNLRQSISNMFDATAKVDMLNNIQKKKET
                     NEPYIILFMGINGTGKTTTIAKFANLLRENKFSSVIAAADTYRAGAIEQIVEHGKRLN
                     IRVIAQNYGSDPAAVARDAVLYAKSHKIDCVLIDTAGRMQTSKNLMDQISKINKVVNP
                     DFRLFV"
BASE COUNT         1066 a          620 c          645 g          908 t
ORIGIN      
        1 cggcatctat tggaagaggt tttccatatt gatccgttgc tggatctgtt gttgtggtaa
       61 ttaaggaagt aacagagtcg gggtctagtt caggatgttt ttgtaaaatg agagctactg
      121 cacctgtgac atgtggagca gccacacttg taccgctagt aaggttgtac attccattca
      181 atgtagtgga atttacaaaa actcctggtg caacaagatc aggcttgatg taaaaaggtg
      241 atactggacc tcttgaacta aaaggcgcaa caacatctgg atgataaaat atgttcaaac
      301 ggccagtgac attttctgca agcattgact ttagagccag tccatcttca tatgacatgg
      361 atatcacagg aatcttgggc atgaaggttg tggttttatt ttgtcctaca agttggccaa
      421 aaaatatgcc actctggtta ttgaatacaa tcagtccttt tgcacccatt tcttcggcat
      481 ttttttcttt taaagaaaaa tagatctttt ccccagttac gttgctgcct ctttcctcaa
      541 gaagtatgtt acccttgaca tttagttttt ccaagtcgct tgtcctccca taacttccgt
      601 agattatttt tccttcaaca ggtgaagcca aaacattggt gccaaccatt gggagaactt
      661 ggtactgttt ttttcctacc tctagcgttg ctacttgact agatgtaatg ttgttatatg
      721 atgcaccaac cgtaattgca tcaatatctt ttcccggact tccaatggtg ccttcttggg
      781 gtccattatt gcctgcagct actactacga caattccctt acttacagca ttgtcaattg
      841 cagtatctat ctgatcattt gtcttgttaa ttcctaaact aatgtttatg acattgacac
      901 cgtcttgaat ggcctgttga attccattga caataaaatc tgatgatact gcatcacctg
      961 tatttgagac cttgtatgca aataattttg atttgggggc catgccgcta aaatttccat
     1021 cagctgctat aattccagca acttctgttc catggccatt tgtgtctagt ggtttctcat
     1081 ttccgctaac aaagtcgtat cctccaacca ccttaccttg tagaccaaat ccaaaaagat
     1141 ctggatgatc aaagtcaatt cctgtatcaa tgatgcctat cttgactccc tgtccttcaa
     1201 acccatctag tcttgctgcg ttgtctccaa ccagttggat acttggctga agagtatttt
     1261 cagatttttc ctcagttgat gttgaaaaaa ataatgtaaa caaaataaaa caaagtgaaa
     1321 aaatcaacag tcggttaaac acgatatatc tggatttaga ctaaataaaa tgcatttgca
     1381 accaaaacca taaatgtcta ggatgatgtg agaactcatg gcaaaatatg aactcccaaa
     1441 gttaccatat gcatatgatg cattggagcc acacatagac gcaagaacaa tggagattca
     1501 tcactcaaaa catcatcagg catatactga tggtttgaac aaagcactgg aaactctaag
     1561 ttccgatttg caaaacatgg aactgaccaa acttttaaca agtctggata aagttcctga
     1621 agccacaaga ggcgcagtta attttcatgg cggtggttat gataaccata cactattctg
     1681 gaataacatg aagcccagtg gtggtggaaa cccaggagga aaactggcag atgctatcaa
     1741 ctcagtcttt ggcagctttg acagtttcaa agaaaaattc acaaaagaca caattgctat
     1801 ccaaggaagc ggttggggtt ggttaacgtt caatcctcaa agcaagaaag ttgaatttac
     1861 aaccatgcca aatcaaacca gtccacgaac caaaggtctg ataccgttaa tgggattaga
     1921 tgtttgggaa catgcatact atctaaaata tcagaacaag cgcgcagact atgttgccgc
     1981 atggtggaat gcagtaaact gggatgaagt cgacaagaga cttgcaaaag cataatcctc
     2041 ttctttttgt tttaacaatt atttccaaac tagattaatt ttgattgaat cacagaatgc
     2101 atttataggt cggtaaaaga atttttttgc aaatgagcga agaacaagcc caagcgttaa
     2161 tgcaacagtt acaagcactt gaaggctaca tggcagactt gttgcaaaga gaagaggcag
     2221 taatgagact attacaggaa gcagcaggcg cagtagaatc tatgaaggct cttagtggag
     2281 acaaagaact tgaaactcta attccagttg gcttgggtgc atatgtaaaa gcaaaagtag
     2341 aaccaaacca gaaaatgatc gtaaacatag gtgctggagc atctatggaa caggataaag
     2401 cttctacaat caactacatg gaatcaagga taaaagaatt agagattgca tttcaacaga
     2461 tagctgctca acgacaagaa gtagcaatga gacttgagca aggccaacat gaaatgaaca
     2521 aacttataca atcaagtcgt ggctcaattc agtaaggctg taaattatgt ttgagaaatt
     2581 aagaaatgct ttttcgtcag cagtaaagag tttaggagaa aaagaactaa aggaaaagga
     2641 catcgacgaa gttctgtttg agcttgaagt agcacttttg gaatcagatg ttgcaacaga
     2701 ggtaattgat tctataaagt ccgacctgaa aaaacaattg attggaacaa cagttcaaaa
     2761 agataccatt gcagaatttg tcaagcaaaa tctacgacag tccatctcaa acatgtttga
     2821 tgctacagcc aaagttgaca tgttaaataa catacaaaaa aagaaggaaa caaacgaacc
     2881 atacatcatt ttatttatgg gaattaacgg taccggaaag actaccacta ttgcaaagtt
     2941 tgcaaatctt ctacgcgaaa ataagttttc ttcagtcatt gctgcagcag acacgtacag
     3001 ggcaggtgca attgaacaga tagtagaaca cggcaagaga ttgaacatca gagttatcgc
     3061 tcagaactat ggttctgatc ctgcagctgt tgcacgtgat gcagtgcttt atgcaaagtc
     3121 tcacaaaata gactgtgtgt taatagacac tgcagggcga atgcagacaa gcaagaacct
     3181 catggaccag atttctaaaa taaacaaagt ggtaaatcca gattttaggc tgtttgtag
//
LOCUS       DASPUS010000158         3179 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1585141, whole genome shotgun sequence.
ACCESSION   DASPUS010000158 DASPUS010000000
VERSION     DASPUS010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3179)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3179)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3179
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1585141"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..435)
                     /locus_tag="VEJ68_03620"
     CDS             complement(<1..435)
                     /locus_tag="VEJ68_03620"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HXX05892.1"
                     /translation="MAKATIETNFGSIVLELFPNIAPETVRNFITLTKKNFYDGTLFH
                     RVIPGFMIQGGDPNTKKPDKSRWGMGGPGHTIKAEFNSRSHLRGIVSMARATDPDSAG
                     SQFFIVTKDSTFLDRQYTVFGQVLEGMDVADKIVNLPRDKNDC"
     gene            714..950
                     /locus_tag="VEJ68_03625"
     CDS             714..950
                     /locus_tag="VEJ68_03625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008298605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05893.1"
                     /translation="MNRTTQSTNIKQAINQLLDKGFTDKQDIYTKVVEELGVPRPTVR
                     RVARDLRNELLQKIKILQSEVPELEENQKSESSN"
     gene            1033..1491
                     /locus_tag="VEJ68_03630"
     CDS             1033..1491
                     /locus_tag="VEJ68_03630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05894.1"
                     /translation="MGNIPTIVVACLAIALTILYFVLPPALQFGMTIFMAAAWFLVII
                     LWLAHKSEQYMHNIEGGYGHAHDEKKKLATNYSQRQHTVQIGANEINEAKAELSADLE
                     SLQHSLQNKDTEIENLKAEIANLNTLVEIEKLRAELANLKALAAKEGKKK"
     gene            1671..2087
                     /locus_tag="VEJ68_03635"
     CDS             1671..2087
                     /locus_tag="VEJ68_03635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05895.1"
                     /translation="MKYIIGGIFGLLMLLLPSLTVPASQEQVASNLVPESDVVLQKVV
                     MNMNIPDNPKLPFGCVWGTVTNPAPGYPVEIEIFKDGKPVYVAQVDVNSDGSYEKYFR
                     VIDVEKDHVTHIFQGDYTVDVFKYVVKNSPPSTTQT"
     gene            complement(2106..2198)
                     /locus_tag="VEJ68_03640"
     tRNA            complement(join(2106..2165,2184..2198))
                     /locus_tag="VEJ68_03640"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2143..2145),aa:Arg,seq:cct)
     gene            complement(2224..2934)
                     /gene="bluB"
                     /locus_tag="VEJ68_03645"
     CDS             complement(2224..2934)
                     /gene="bluB"
                     /locus_tag="VEJ68_03645"
                     /EC_number="1.13.11.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016722 - oxidoreductase activity, acting
                     on metal ions [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0032363 - FMN catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5,6-dimethylbenzimidazole synthase"
                     /protein_id="HXX05896.1"
                     /translation="MVGDFSPEEKSGFYKAVFSRRDVRSHFTPESIDEKVLSKILNAA
                     HHAPSVGFSQPWNFILIKDVETRRSVKESFDEERIRSSNLIEDPKRSKYLSLRLQGIL
                     DSAVNVCVTYDPSKFGPFVIGRSSIPETGIYSVCCAIQNLWLAARAEGIGVGWVSILS
                     NDDLKKVLDIPEHVIPVAYLCLGHVSNFAEKPDLESAGWLPRLSLKDVIFYEKWNNVD
                     DPKWQQIRDMIISNLDYA"
     gene            3013..3086
                     /locus_tag="VEJ68_03650"
     tRNA            3013..3086
                     /locus_tag="VEJ68_03650"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3047..3049,aa:Val,seq:gac)
BASE COUNT         1034 a          621 c          544 g          980 t
ORIGIN      
        1 gcagtcattc ttatctctag gtagatttac tatcttgtct gctacatcca ttccttccaa
       61 gacttgacca aaaacggtat attgtctatc aagaaatgtg ctgtcttttg ttactataaa
      121 aaattgagaa ccagcgctgt ctgggtctgt cgctcttgcc attgagacaa ttcccctaag
      181 atgagatctt gaattaaact ccgcttttat agtatggcct ggtcctccca tgccccatct
      241 gctcttgtct ggttttttgg tattgggatc ccctccttga atcataaaac ccggaattac
      301 tctatgaaaa agtgtgccgt cgtaaaaatt ttttttggta agcgttataa aatttcgaac
      361 agtctctggt gcaatatttg ggaataactc aagtacaata cttccaaaat ttgtctctat
      421 tgtagccttg gccacttttg acaaaatctt tcctaatcat aagaaccttt ctacgctttt
      481 ttactttttc agtaaggttt tacttttgat tattctaata accaatccag tacgataaaa
      541 agattttaac tgtaacaaat tcaataaaaa attctgaaaa aattagaaaa ttatgataca
      601 aacataaaac aggaatgcct tgttaaaaca aaaaactgta tttttttaat gtgtaatact
      661 actaccaaaa ttatagtaac agtcttatat agaagatctg aaaaataaaa aacgtgaatc
      721 gtactactca aagcacaaac atcaaacaag caatcaatca actgcttgac aaaggcttta
      781 ctgataaaca agatatctac acaaaagttg tagaagaact tggagttcca cgaccaacgg
      841 taaggcgagt agcaagagat cttagaaacg agcttctaca gaagattaag attttgcagt
      901 ctgaagttcc agagttagaa gaaaatcaga aaagtgaaag cagcaactag caaaatccct
      961 cttttttaat tcatataatc taccttgata atctccatta ctgttatatt ctagaacttt
     1021 tagggtattt tcatggggaa tatccctact attgtagtag catgtcttgc tatcgcttta
     1081 acaattctgt actttgtact accaccagca ctacaatttg gtatgactat ctttatggca
     1141 gcagcttggt ttttggtaat tattctctgg ttagcacata aaagtgaaca gtatatgcat
     1201 aacattgagg gtggttacgg ccatgcacat gatgaaaaaa aaaagctagc aaccaactat
     1261 agtcaacgac aacacactgt acaaattggt gctaatgaga taaatgaagc aaaagccgag
     1321 cttagtgcag atctagaaag tctacaacac tcacttcaga acaaagacac tgaaattgaa
     1381 aacctaaagg cagagattgc caatctaaat actcttgtag aaatagaaaa actgcgagca
     1441 gagctagcta atctgaaagc attagcagca aaagaaggaa agaaaaagta atcatctatt
     1501 tgcaatgcgc acaaaaatgt tttccgtgat tttctttaca tgatggacaa ctaactgctc
     1561 ctccataatg gcagttacac ttgcagccat catttagctt ctcttctgct atcaactgat
     1621 atacaccact tgtacgtcat cttaatattt aacgatgtaa aatacttggt gtgaagtata
     1681 tcataggtgg catctttgga ctgttgatgc ttttacttcc tagtttaaca gtcccagctt
     1741 ctcaagaaca agtagcttca aatttggttc cagaaagtga tgttgttcta caaaaagttg
     1801 ttatgaatat gaatattcca gacaatccca agcttccatt tggttgtgtt tggggaacag
     1861 tgacaaatcc tgcaccagga tatcctgttg aaattgaaat ttttaaagat ggaaaaccag
     1921 tctacgttgc tcaagttgat gttaattctg atggttcata tgaaaaatac tttagagtca
     1981 tcgatgttga aaaagatcat gtgacacaca tcttccaagg tgattatacc gttgatgttt
     2041 tcaaatatgt ggtaaaaaac tcaccaccat ctactactca aacctaaatt gtggatttaa
     2101 ataaacgggc tcggagggct tcgatccctc gacctgtaac ttaggaggct accgcgctat
     2161 ccatgtttcg cgtcataaag actctgcgcc acgagcccag caaaaatcaa acttggtatg
     2221 catttaagcg taatcgaggt ttgaaattat catatctcga atttgttgcc atttgggatc
     2281 atcgacatta ttccattttt cataaaatat gacatccttc aaacttagtc gtggtaacca
     2341 accagcactc tccaaatctg gcttttcagc aaaatttgag acatgtccaa gacacaaata
     2401 ggcaactgga attacatgct cgggaatatc aagaactttt tttagatcat catttgaaag
     2461 tatacttacc catcctacac ctattccttc ggctcttgca gctagccaaa gattttgtat
     2521 ggcacaacaa acgctgtata ttccagtttc tggaatgcta cttcgaccta ttacaaatgg
     2581 tccaaacttt gacggatcat aagttacaca aacatttaca gccgaatcca agattccttg
     2641 caatcttaaa gagaggtact ttgatctttt gggatcttct ataagatttg aagagcgtat
     2701 tctctcttca tcaaaggatt ccttcacact ccttcgagtt tctacatctt taattaaaat
     2761 aaagttccaa ggctgagaaa agccaactga tggtgcatga tgtgctgcat ttagtatttt
     2821 tgataaaact ttctcatcta tcgattcggg tgtaaaatga gaccttacat cacgtcttga
     2881 aaagactgct ttgtaaaatc cacttttttc ctccggtgaa aaatcaccaa ccatgtgata
     2941 tcaaatagtg cattgcatat tattcttgtt ttcttaaacg ttaataacgt ctagagaagg
     3001 tcgaatccta ttgggccgat ggtctagcct ggtaggatac ccccctgaca cgggggtggt
     3061 cgagagttca aatctctctc ggcccatttc tttttattta atgcaagtaa atacaatgca
     3121 tgctaagatt taccataaag gaatcacaat tcctaaagga aaatgagggc tgcagagta
//
LOCUS       DASPUS010000159         2570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1585294, whole genome shotgun sequence.
ACCESSION   DASPUS010000159 DASPUS010000000
VERSION     DASPUS010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2570)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1585294"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="VEJ68_03655"
     CDS             <1..406
                     /locus_tag="VEJ68_03655"
                     /inference="COORDINATES: protein motif:HMM:NF019604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HXX05897.1"
                     /translation="ENVELVPQSSIKNISGKNSLQSITIVDNAGKEKNLQVDGLFIEM
                     GSKINLDFVKHLVKINTKGEIEISEGGKTSNPAIFAAGDATTIPYKQIVAACAGGANA
                     GLSAFNYVERLKGRPGIRADWKKTIGETVFHY"
     gene            494..838
                     /locus_tag="VEJ68_03660"
     CDS             494..838
                     /locus_tag="VEJ68_03660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008300109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05898.1"
                     /translation="MSKTNKDWDMMWDDYTNSLKEWMQAFESLRKAGNDVQSKYNEVM
                     KKAMNESSQKTMKEFTENWQKTMTRSESNAFKEFGDNWQKTMNQSGMEQLKTYGEMMD
                     KFADTWQKMWRK"
     gene            complement(1046..1633)
                     /locus_tag="VEJ68_03665"
     CDS             complement(1046..1633)
                     /locus_tag="VEJ68_03665"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HXX05899.1"
                     /translation="MSDIKSLHKKGLELQKTGKQEEAISYFDKAIKRQPSNADLFYDK
                     AISLQRLFRFEDAIAFYDKSLEIEPNSFASLINKGLCLSNSSINRQNEAVICFEEAIK
                     IEPNDLGVQTLLGYSLDSIGRYSEAINCYDKVLENAPNDLNVLANKGLSLLHLGRYDE
                     AIAYFDKVIEDEPNNLFAQEWKKDAIKMQDKHLLF"
     gene            complement(1653..2081)
                     /locus_tag="VEJ68_03670"
     CDS             complement(1653..2081)
                     /locus_tag="VEJ68_03670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05900.1"
                     /translation="MPGNHIPEDGGLSPCEIQYLEKVDWTWKQLVPSQKSRIVYSVYD
                     GTLRQGSGKHCFIAEAININKIKTPHDSHLLEKCIQFVSDIFYDGPSYDFLFDREITS
                     HERKILDDIYYARIGNREYGYQRATELVRMYVTCQLIIAK"
     gene            2248..>2570
                     /locus_tag="VEJ68_03675"
     CDS             2248..>2570
                     /locus_tag="VEJ68_03675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HXX05901.1"
                     /translation="MNKNSILTICAALVGSIIILSSIQVSDSVLTYKMLVTVQPEKSP
                     IMEGEFPVIIGTVKDEAYKPVANANVLILFGNEAVTTTTDVAGNYRYQSAIPATPGTY
                     EIDVTA"
BASE COUNT          851 a          455 c          454 g          810 t
ORIGIN      
        1 agaaaatgtg gaattggtac cacaatcttc aatcaagaat atttctggca agaatagtct
       61 acaatcaatc actattgttg acaatgcagg aaaagaaaaa aatcttcagg ttgacggtct
      121 attcatcgag atgggttcta agataaattt agattttgta aaacaccttg ttaaaatcaa
      181 cacaaagggt gaaattgaga tttcagaggg aggcaaaaca tccaatcctg caatttttgc
      241 agcaggtgat gcaaccacaa ttccatataa acaaattgtt gctgcatgtg ctggcggtgc
      301 caatgctgga ttgtcagcgt tcaactatgt agaaagattg aagggaagac cggggatacg
      361 tgcggattgg aaaaagacca tcggagaaac ggtatttcat tactaaatgc agatttttac
      421 atattaatat gataaacggt ctgtgattgg cgcaagtaac aacatttatc agataattaa
      481 agaatagaaa atcatgtcaa aaactaacaa ggattgggat atgatgtggg atgattatac
      541 aaattctctt aaagaatgga tgcaagcatt tgagtctctc agaaaagcag gtaatgatgt
      601 acaatccaaa tacaacgagg ttatgaagaa agccatgaat gaatcaagtc aaaaaacaat
      661 gaaagaattt acagaaaact ggcaaaaaac aatgactcgt tctgaatcca atgccttcaa
      721 agaatttggt gataattggc aaaaaacaat gaatcagtca ggtatggagc aactaaagac
      781 atacggcgaa atgatggaca aatttgcaga tacttggcag aaaatgtggc gaaaataatt
      841 tcattttttc caagttttat atttatcgac caaaacgatt gatattaaaa ttactaatga
      901 attattccta atcttcaaat tcataaaaat ccttcgtaag ataggttcga tccaaaggtt
      961 ctatccacat gctgcgtctt catgcccctt gggtcgaacc ggatgcaatt ttataatact
     1021 gtgaactttt tctcaaacgt ttacatcaaa acaaaagatg cttatcctgc atttttattg
     1081 catctttctt ccactcttga gcaaatagat tattcggctc gtcctcaatt accttatcaa
     1141 aatatgctat tgcttcgtca tatcttccaa gatgcagaag cgaaagtccc ttgtttgcaa
     1201 gaacgttcaa atcatttggc gcattctcta gtaccttgtc ataacaattg atagcttcac
     1261 tgtatcttcc tatgctatca agggaatacc ccagaagagt ttgaactcca agatcatttg
     1321 gttcaatttt gattgcttct tcaaaacaaa ttactgcttc attttgcctg tttatactag
     1381 agtttgacaa acaaagaccc ttgttaatta gtgatgcaaa gctatttggt tctatttcaa
     1441 gtgacttgtc ataaaaggca attgcatctt caaatctgaa gagcctttgc aaagatattg
     1501 ccttgtcata aaataaatcg gcattactag gttggcgctt tattgccttg tcaaagtacg
     1561 atatggcttc ttcttgcttt cctgtcttct gtagttccaa tcccttctta tgcaatgatt
     1621 tgatatcgct cattttacat acactggaat gattactttg ctattatcaa ttggcatgta
     1681 acatacattc ttaccaattc tgttgctctc tggtaaccat actctctatt tcctattctt
     1741 gcataataga tatcatcaag tatttttctt tcgtgggaag ttatttctct atcaaataaa
     1801 aagtcataag aaggtccatc ataaaatatg tcgcttacaa attgtatgca tttttcaagt
     1861 aaatggctgt catggggggt ttttatttta tttatgttga ttgcctctgc aataaagcaa
     1921 tgcttaccgc taccttgtct caaagtacca tcatatacag agtaaactat cctggatttt
     1981 tgtgaaggaa caagttgttt ccatgtccaa tccacttttt ctaaatactg aatttcacat
     2041 ggggaaaggc caccgtcttc aggaatatgg tttcctggca catgtaatat tacgtgttgg
     2101 ttaaatttaa gaattaaaat tctaattata ctctcttaac agtgaattct ctgggaacca
     2161 tgttttatct ttactaaaca attctgagcc aatagagaaa aaagttagat ttcgctgatt
     2221 aacaatgaat acaaaaagga caaagagttg aataagaatt caattctcac aatctgtgct
     2281 gccctcgtag ggagtataat tatactatct agcattcagg tttcagactc tgtgcttact
     2341 tacaaaatgc ttgttacagt acagcctgaa aaaagcccaa taatggaagg ggagtttcca
     2401 gtgattattg gtactgtaaa agatgaagca tacaaaccag ttgctaatgc taatgtgttg
     2461 atactatttg gaaatgaggc agtgacaact acaaccgatg tagcaggcaa ctacagatat
     2521 caatctgcaa tacctgcaac ccctggtact tatgaaattg atgttactgc
//
LOCUS       DASPUS010000160         4614 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_227647, whole genome shotgun sequence.
ACCESSION   DASPUS010000160 DASPUS010000000
VERSION     DASPUS010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4614)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4614
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227647"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(86..763)
                     /gene="pyrH"
                     /locus_tag="VEJ68_03680"
     CDS             complement(86..763)
                     /gene="pyrH"
                     /locus_tag="VEJ68_03680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HXX05902.1"
                     /translation="MRKRIVIKLSGSLFGLDDTKTLKQFAELFVRISRICQPIIIAGG
                     GKIARHYISHARLSGADESTLDELGIEVSRLNAKLLIYALQDKAYPHPPTNLKEVAHA
                     SDSGLVVITGGLHPGQSTNATAALIAEKVRASIFLNATDVDGVYDSDPHKNKHAKKFK
                     KIPIKKLRNMLVHQDSIAGGYDLMDIVALKVIERSKIKTRILKADVKILEKAIKGSPE
                     GTEITLT"
     gene            complement(763..2004)
                     /locus_tag="VEJ68_03685"
     CDS             complement(763..2004)
                     /locus_tag="VEJ68_03685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013482777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HXX05903.1"
                     /translation="MVKKYFQIVDPIHDFINVYNYEVQIIDDPIFQRLRRIRQLAGAH
                     LVYPGAQHSRFEHSLGTMHIASQAASILKEKNYLGSDDIENLRLAALLHDIGHGPFSH
                     LFEEVLYKKRKISHEQIGKKLILKSEIGDLISKNGFNKNFISKLAFGNSKYQFMNEII
                     SGGLSADMMDYLLRDSYFTGAEHARIDFKRIINSLDVHEKKLSLNKSALHSFESMMIS
                     RYQMFRTVYFHKTVRAAEVMLLESMLLADDELGLTTSDLKNYVQLTDEYIISKLIFLP
                     KKDSQLRRASQLALDYQERRLLKCVYEKIFMKPRMGKINTIELQHDIAKKARVDEDEV
                     FIDISKTPSIPLTPSKKESRSIILTSKGVNPKEAYELPISEIPLVSAISGFMDILRVY
                     ARQQFRKKVEMAAEVIIGENR"
     gene            complement(2006..2587)
                     /gene="tmk"
                     /locus_tag="VEJ68_03690"
     CDS             complement(2006..2587)
                     /gene="tmk"
                     /locus_tag="VEJ68_03690"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HXX05904.1"
                     /translation="MIIVIEGFDQAGKKTQSKYLATFLRKKKIKSKIFSFPDYGTPLG
                     KEIKHYLSGNRKFPPQVIHCLLAANRWERSKEIRKAISEKFIVIMNRYYQSNLVYGNV
                     NGLDMKWLENLDKGLPKEDLVILLDVNPNVSFSRKKEKRDKFEKNKEFAQKITRTYKK
                     LAKKFGWYIVNASRDKQEVHKEIKQIVSKYIKK"
     gene            2668..3051
                     /gene="hsp14"
                     /locus_tag="VEJ68_03695"
     CDS             2668..3051
                     /gene="hsp14"
                     /locus_tag="VEJ68_03695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012216090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaeal heat shock protein Hsp14"
                     /protein_id="HXX05905.1"
                     /translation="MGLGYYMVKEVMREIGNKSREFYEFILPPVDMVMHNDNLIVTID
                     MPGFDKKDIKLRIHGHILSINAKRETIDEGTIIWRQRPNVIDKKVRLPLGVKGEEDIG
                     ASAKYHDGVLSLTIPMKTGKNISIE"
     gene            complement(3052..4602)
                     /locus_tag="VEJ68_03700"
     CDS             complement(3052..4602)
                     /locus_tag="VEJ68_03700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010189566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/ABC1/UbiB kinase family protein"
                     /protein_id="HXX05906.1"
                     /translation="MTKIRTAKTFLTLLPLVLALRKDRREWVKKQGKNVNLSRYQRNA
                     RKALKTFVSLGPVYIKLGQWLSSRADILPQPYMEELSKLQDEVPAASFEQAKPVIEND
                     LGPIDRNFDYINPTAVSGASLGQVYLAKIKGQEVIVKVKRPNIEKVVEEDIKVLKKII
                     PFAMKFVDPNLRYSADAMLSQFIETIHEEMDYRIESQNLKTIKRNLRNYPKLIIPSVM
                     EDYSSKNVLVMEYVPGIKITNVKALDEAGINREQLVVRAHKVFFTMLLRHEIFHADPH
                     PGNISVTNDGSLILYDFGMVGRLDTQTRLKLIRLYLALVEKDPPRTVNAMDDLGMLMP
                     GYDRGIIEQGIGLSIQALYGTKVDKMEVKALMELANKTMSRFPFKLPKHLALYMRMAS
                     ILEGIYLTHKVDFRFIGVLRTILEEENIVKDAYVEELKLAFNRFVKSIDSAIAIVPEI
                     KKFLEENRRLRENPPKSKNILLIGSILSAALFVGSTILYTVNNSIGEIGMAGSAVVIG
                     ISIALTNH"
BASE COUNT         1364 a          811 c          780 g         1659 t
ORIGIN      
        1 caatcaaaga cgctgactga aaaagaagca aaagaaattt tgaataaggc aaaaaattca
       61 ggaattccag aatatacagg acaagttagg ttagtgtaat ttctgttcct tcgggacttc
      121 ctttgatagc cttttctaat atcttaacat cagcttttag aattcttgtt ttgattttgg
      181 atcgttcaat aactttgagt gctacaatat ccatcaaatc atagccaccg gcgattgagt
      241 cttgatgaac caacatattg cgtaattttt tgattggaat ttttttgaat ttctttgcat
      301 gcttgttctt atgaggatct gaatcgtaga caccatctac atctgttgca ttaagaaata
      361 tacttgctct gaccttttct gcaataagag ctgctgtagc gttagtactt tgtcctggat
      421 gcaagcctcc cgtaattact acaagcccac tgtctgatgc gtgtgctact tcctttagat
      481 tagtgggggg atgtggatat gccttatcct gtaatgcata tatcagtaat tttgcgttta
      541 aacgagatac ttctatgccc agttcatcaa gtgtagattc atcagcacca gataatcttg
      601 catgtgagat gtaatgccta gcaattttac cacctcctgc aattattatc ggttgacaga
      661 ttctgcttat tctaacaaaa agctcagcaa attgtttgag cgtcttagta tcatccaaac
      721 caaataaact accagaaagt tttatgacaa ttctttttct cattatctgt tttcaccaat
      781 gatgacttct gctgccattt caaccttttt tctaaactgt tgtcttgcat aaactcgaag
      841 aatatccatg aatcctgata ttgcagagac tagaggaatt tcagaaattg gaagttcata
      901 agcttcctta ggatttactc cctttgaagt taagatgatt gatcgtgatt ccttttttga
      961 aggtgtaagg ggtatcgatg gtgtttttga tatatcgatg aaaacctcat cttcatctac
     1021 tcttgctttt tttgcaatgt cgtgttgtaa ctctattgta ttaatcttgc ccattcttgg
     1081 tttcatgaaa attttttcat atacacattt tagcaatctg cgttcttgat agtccaatgc
     1141 aagttgactt gcccttctaa gttgcgaatc tttcttaggt agaaaaataa gctttgatat
     1201 tatatattcg tctgtaagtt gtacataatt ttttaaatca cttgtagtaa gtccgagctc
     1261 gtcgtctgca agtaacatgg attcaagcaa cataacctct gcagctcgaa cagttttatg
     1321 gaaataaact gtcctgaaca tttgatatct agatatcatc attgattcaa aagaatgaag
     1381 agctgacttg ttaagagaaa gttttttttc atgaacatcg agcgagttaa taattctctt
     1441 aaagtcgatt ctagcatgct ctgctcctgt aaaatagcta tcacgaagca aatagtccat
     1501 catatctgca ctaagaccac ctgaaattat ctcattcatg aattgatatt ttgaattacc
     1561 aaatgctaac ttgctaatga agttcttgtt aaaaccattt tttgaaatta aatctccaat
     1621 ttctgatttt aaaattaact tctttcctat ttgttcgtga gagatttttc tcttcttata
     1681 tagaacttct tcaaaaagat gggaaaaagg cccatgacct atatcatgta ataatgctgc
     1741 aagtcttagg ttttcaatat catcagagcc gagatagttt ttttctttga gtattgatgc
     1801 tgcttgactt gcaatatgca tcgttccaag cgagtgttca aatcttgaat gttgtgcacc
     1861 aggataaaca agatgtgctc cggcaagttg ccttattcga cgaagtcttt gaaatatcgg
     1921 atcatctata atttgaactt catagttgta gacattaatg aagtcgtgta ttggatcaac
     1981 gatctgaaaa tattttttta ccatattatt tcttgatgta tttagagaca atttgtttaa
     2041 tttctttatg aacttcttgt ttatcacgtg atgcatttac aatataccat ccaaattttt
     2101 ttgctagttt tttgtatgtt ctagtaatct tttgtgcaaa ttctttattt ttttcaaact
     2161 tgtcacgttt ttcttttttg cgagaaaatg aaacattcgg atttacatct agaagaataa
     2221 ctagatcttc ttttggaagt cctttgtcaa gattctcaag ccatttcata tcaaggccat
     2281 ttacatttcc ataaactaga tttgattgat agtatctatt cataataaca atgaattttt
     2341 ctgaaatagc ttttctgatt tctttagatc tttcccacct gtttgctgca agaagacaat
     2401 ggattacttg tggcggaaat ttacgattgc cactaagata atgtttgatt tctttaccta
     2461 gtggtgttcc ataatccgga aaactgaata ttttagattt tatttttttc tttctcaaaa
     2521 aggttgcaag atacttggat tgagtttttt ttcctgcttg atcaaatcct tcaattacga
     2581 taatcatcac gtcctattga aaagggaagt agataaattg taaatttgac taacgtttaa
     2641 taaccaaaat gggttaaaaa tagtaaaatg ggcttgggtt attacatggt aaaagaagtc
     2701 atgcgagaga taggcaacaa gtcaagggag ttctatgaat ttattctacc tccagttgac
     2761 atggttatgc ataatgataa tctcattgta acaatagata tgcctggatt tgataagaag
     2821 gatatcaaat tacgaatcca tggtcatatt ttatctatta atgcaaaaag agagacgatt
     2881 gatgagggta caataatctg gcgccaaaga cctaacgtaa tagacaagaa agttagatta
     2941 ccattaggag taaaaggaga ggaagatatt ggtgcttccg caaagtatca tgacggagta
     3001 ctctcactga caataccaat gaagactgga aaaaatatat caatagaata actaatgatt
     3061 tgttaatgca attgagattc ctatcacaac tgctgaacct gccataccta tttctccaat
     3121 agagttgttt acagtataaa gtatggttga accaacaaat aatgcagcag acaagatgct
     3181 tccaatcaat aatatgtttt ttgatttagg tggattttcg cgcaatcttc tattttcttc
     3241 taagaatttt ttgatctctg gaacaatagc tattgcagaa tcaattgatt tcacaaatct
     3301 gttgaaggca agcttcagct cttcaacata ggcatctttt acaatgttct cttcttccaa
     3361 aatagttcgt aaaacaccga tgaatctaaa atctacttta tgtgtgagat aaattccctc
     3421 caaaatggat gccatcctca tgtagagtgc aagatgtttt ggtagtttga atggaaacct
     3481 gctcatagtt ttatttgcaa gttccattag tgccttgact tccatcttgt caaccttggt
     3541 tccataaagt gcctgaattg agagtcctat tccttgttct attattcccc tatcatatcc
     3601 aggcattagc ataccaagat catccattgc gtttactgtt ctgggtggat ctttttccac
     3661 caatgccaga tacaacctta tcaactttag acgtgtttga gtatctagtc ttcctaccat
     3721 gccaaaatca tatagtatca aggaaccatc atttgtgaca gatatattcc caggatgagg
     3781 gtctgcatga aatatctcat gtctgaggag cattgtgaaa aacaccttat gtgcacgtac
     3841 aactagttgt tctctattaa ttcctgcttc atcaagggct tttacattgg ttatttttat
     3901 tccaggaaca tactccataa cgagtacatt tttgcttgaa taatcttcca taactgatgg
     3961 tattattaat ttggggtagt ttctgagatt tctctttatt gtctttaaat tctgagattc
     4021 tatacgataa tccatttctt catgtatggt ttctatgaat tgtgatagca tggcatctgc
     4081 tgaatatctc aaatttggat ctacaaactt cattgcaaat ggaatgattt tctttaaaac
     4141 tttgatatcc tcttctacta ccttttctat attgggtcgt ttaaccttga caattacctc
     4201 ctgaccttta atttttgcaa gataaacttg cccaagagaa gctccagaga cagctgttgg
     4261 attgatatag tcaaagtttc gatctattgg tcccagatca ttttcaataa ctggttttgc
     4321 ttgttcaaat gacgctgctg gaacttcatc ctgaagtttt gaaagctctt ccatgtatgg
     4381 ttgcggtagt atatcagctc ttgaagaaag ccactgacca agcttgatgt aaacaggtcc
     4441 aagtgataca aaagttttga gtgctttacg agcattcctt tgatatctac ttagattaac
     4501 attttttcct tgttttttta cccattctct tctatctttt cgtaaagcta gtacaagtgg
     4561 taaaagtgtg agaaaggttt tagctgttcg aatttttgta atgtcaatgt cccc
//
LOCUS       DASPUS010000161         9717 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1452952, whole genome shotgun sequence.
ACCESSION   DASPUS010000161 DASPUS010000000
VERSION     DASPUS010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 9717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9717)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9717
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1452952"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..319)
                     /locus_tag="VEJ68_03705"
     CDS             complement(<1..319)
                     /locus_tag="VEJ68_03705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HXX05907.1"
                     /translation="MTENILLNKPQHNLHDAANAALLLAIFVGVWQLVFMLGIWPKIS
                     LPSPAMVAVSFGTLTSNLSLPLGVGITLGRLVAGFLISISLGTLIGLGMIRFKGFGKT
                     LNSF"
     gene            complement(316..1092)
                     /locus_tag="VEJ68_03710"
     CDS             complement(316..1092)
                     /locus_tag="VEJ68_03710"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HXX05908.1"
                     /translation="MTKLQAKSIVKHFDHNGESVLALDGVDLKVEEGDFICLVGPSGC
                     GKSTFLNIVAGLEKPDSGEILLNGKPVYATGPDRTLVFQEGALFPWLKVVDNVEFGLK
                     MAGVPKEQRREISQRYLDMMQLTKFADSYTYQLSTGMKQRVAIARALAMDPEILLMDE
                     PFAALDSQTRDLLLVELQLIWERTKKTIIFVTHNISESVILGNRVVVFKNRPSKIKKE
                     IAIDYRRPRLAEDENLQKYYHQILEALKSEVIAQIKDENQ"
     gene            1328..2515
                     /locus_tag="VEJ68_03715"
     CDS             1328..2515
                     /locus_tag="VEJ68_03715"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HXX05909.1"
                     /translation="MKGKAVLAFSGGLDTSVVIKYLQEQHDLDVVTVTIDVGQGDDQK
                     KIAAKAKRLGVLKHYNIDARQEFVDNFIFPSIKANALYQKKYCLATALARPLIAQKVV
                     EVAKKENAKALAHGCTGKGNDQVRFDVTMRSGSNLPIIAPIRDLNLTRDIELKFAKKH
                     GIQIDTAAKRFSIDQNLWGRAIEGGDLEDSFEEPPEDAFIWVKTKNMPDKPQYLEIRF
                     NQGIPVAVDGKSLKPIELIEYINKKAGGCGVGIVDHIEDRVVGIKSREVYETPAALAI
                     IEAHTDLEKMVLTKHELKFKAIVDSEWAWLAYSGLWQDPLKSDLDMFINASQKRVSGT
                     VKLKMFKGSLRVVGRKSPYSLYSHDLATYGKGSTFDQTLAKGFVELWGLQSTEANKLL
                     KKR"
     gene            2527..2694
                     /gene="lysW/argW"
                     /locus_tag="VEJ68_03720"
     CDS             2527..2694
                     /gene="lysW/argW"
                     /locus_tag="VEJ68_03720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019878 - lysine biosynthetic process via
                     aminoadipic acid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-aminoadipate/glutamate carrier protein
                     LysW/ArgW"
                     /protein_id="HXX05910.1"
                     /translation="MNCPECDGNMKIPDDASVGEIVSCPDCGADFEIASKNGSVCELK
                     HAEKVGEDWGE"
     gene            2695..3552
                     /gene="lysX"
                     /locus_tag="VEJ68_03725"
     CDS             2695..3552
                     /gene="lysX"
                     /locus_tag="VEJ68_03725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine biosynthesis protein LysX"
                     /protein_id="HXX05911.1"
                     /translation="MPKVRIVFDRIRLEEKMLEEKSKELGHDTKMIDAKTTHINTESK
                     KSNFDFGDVVLERCVSYFRGLHFTSCLEFLDVPVLNRFEVANNCGNKMITSLLLKKQN
                     VPTPKTFFSFSSETALEILEKEGYPLVIKPIIGSWGRGVILLKDRDTADAIIEVRELS
                     DGPLDRIYYLQEAVKRPPRDIRAIVVGDQVIAAMYRTSTGGFKTNIALGGEPVLCEIT
                     KDIEDICIKASKAVGGGILGVDIMEDEKRGYVVHEVNNTVEFKGLAKVAKRNIPKEMI
                     DYAVSFAIR"
     gene            3612..4664
                     /gene="argC"
                     /locus_tag="VEJ68_03730"
     CDS             3612..4664
                     /gene="argC"
                     /locus_tag="VEJ68_03730"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013482452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HXX05912.1"
                     /translation="MRIGVIGASGYVGGEILRLLVSHPKVEISMVTSRQYVGEYISRV
                     QPSLKGFTDLTFSELNYDKLSDKCDLVFTSVPHGTAVDIVKELYDRGMKVIDLSADYR
                     LHNAPDYDKWYGWKHTHPDYLPKSVFGVPELHREEIKKAQLVSCPGCMAVTSILGLYP
                     LVKKGIIDTEHIIVDSKIGSYGAGAGTEAGTHHAMRSGVIRPYKPAKHRHTGEIEQEL
                     SQAAGKKIKVSMSPHAVDIVRGILCTNHTFLTKQVSEMDLWKMYREQYQNEKFIRLIR
                     DKKGFYKFPDPKFVVGSNFCDVGFDIDEDNNRLVVLSASDNLMKGAAGSAIQNMNVMA
                     GFDEMDGIRYSPLTPV"
     gene            4669..5469
                     /locus_tag="VEJ68_03735"
     CDS             4669..5469
                     /locus_tag="VEJ68_03735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[LysW]-aminoadipate/[LysW]-glutamate kinase"
                     /protein_id="HXX05913.1"
                     /translation="MITIKIGGSVVDGLHPSIIADLKKVSENEKVILVHGGGKEVTKI
                     SEALGKEQKFIVSPGGIKSRFTDKETAEIFTMVMSGKINKMIVGMLQKNGINAVGLSG
                     VDGKIIQAERKKKLIVINEKGRKMAIDGGYTGKIQEVNTDLIKLMLDKGYVPVISPIA
                     ISEEFDFLNVDGDRAAAYVAGKMKSDKILFLTNVNGLLMDDKLVTKLTLAEAKEILPK
                     IGFGMEKKILAATEAIEMGVKQALISNGQRENPITVAIANDNCTVIEK"
     gene            5466..6641
                     /locus_tag="VEJ68_03740"
     CDS             5466..6641
                     /locus_tag="VEJ68_03740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_process: GO:0006525 - arginine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine/succinylornithine family
                     transaminase"
                     /protein_id="HXX05914.1"
                     /translation="MTEDQFMGNIYQRFPVTIERGLGSHVWDINGKEYIDCMGGYGVA
                     IVGHCNPRVVHKIKEQLDKIITVHSSLYNKTREEFLERLAKIAPSGLNQVFLNNSGTE
                     AVEAAIKFARKFTGKKGLVAMNGSYHGKSYGSLSVTFNPKYRKAFEPLLSNVSFSPFG
                     DIEALKSTINQDTALIILEPIQGESGIHVAPDGFLQEVRKICNENGIVLVFDEIQSGM
                     GRTGKMWASQHWETVPDIMCLAKGIAGGVPMGATLVKPEILACIGKGEQSSTFGGNPL
                     SCAAGIGTIQALTEDGLVENGAKMGKVFREGLERLKEKHKIIREVRGKGLMIGIEMKF
                     EVKDILFDAMANNLLLLYSGKNILRLLPPLVISEPDITKALETLDIIITKEKQRRNV"
     gene            6634..7053
                     /gene="lysM"
                     /locus_tag="VEJ68_03745"
     CDS             6634..7053
                     /gene="lysM"
                     /locus_tag="VEJ68_03745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0019878 - lysine biosynthetic process via
                     aminoadipic acid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator LysM"
                     /protein_id="HXX05915.1"
                     /translation="MSSDKTDETIIEMLKKDSRQSFVEIGEKLGLSESAVRRRVKNLT
                     DGGAIKKFTIETGDSNSTSAIILISVDSATDTSKVSAKLVRLPGVHTVYEITGQYDIA
                     AIIRAPTITDINVCIDSLRKVPGVFDTNTVIILRTIS"
     gene            7169..8359
                     /locus_tag="VEJ68_03750"
     CDS             7169..8359
                     /locus_tag="VEJ68_03750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HXX05916.1"
                     /translation="MDDPNYYAYKYNEMGVKPKKIHILDSTLREGEQHPGVTFSNKQR
                     IQIAWMLDYFGVDQIEISPVVSPDHKEATKTIIKQGLKADIVAHVRALREDVDVALDC
                     GATWMATYLGISDIHMKDKLRITPEEALRRAVDTVEYAKSHGLKMRFTVEDGSRADPE
                     FLIKVCKAISDVGVDRISIPDTVGIMRPNGMYNLVKTVRDQIKTPLDVHCHNDIGLAL
                     ANALAGCDGGADQIHTTIDGIGERTGIPALAETAVALTYLYRSPNNFRLDMLMDLSRL
                     IEQYTTIVPYDSKPIVGATAYKHKAGTHLAAILRNPAAYEPIEPKVVGNRRRIVFGEL
                     AGKNGAAYLMSLLGLDQDDEHAKKVAAGLKNLRMGDLLEIPLDDRLERKIINDTQMKV
                     KTGK"
     gene            8361..8525
                     /gene="lysW/argW"
                     /locus_tag="VEJ68_03755"
     CDS             8361..8525
                     /gene="lysW/argW"
                     /locus_tag="VEJ68_03755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019878 - lysine biosynthetic process via
                     aminoadipic acid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-aminoadipate/glutamate carrier protein
                     LysW/ArgW"
                     /protein_id="HXX05917.1"
                     /translation="MKCLECDANINPPKDSMEGEIVTCPDCGASFELAKSSAGFELKP
                     AQTVGEDWGQ"
     gene            8522..9370
                     /gene="lysX"
                     /locus_tag="VEJ68_03760"
     CDS             8522..9370
                     /gene="lysX"
                     /locus_tag="VEJ68_03760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine biosynthesis protein LysX"
                     /protein_id="HXX05918.1"
                     /translation="MSSGLSILYDTIRWEEKALFDAAKKKNVNAKMVDCKGLSVNLDS
                     SVEEFGTVIQRCVSYYRSLHSTAALEGKGINVINSLNTSILAGNKLFTHMLLVKNNIP
                     TPFSAVAFSEEAALEFLDKQGYPMVLKPTVGSWGRMIALLKDRDAAEGIMETREKMYP
                     IYQVYYLEEFVERPPRDIRAIMVGDKVVAAIYRYSGEGQWKTNMALGGKAEPLKVTKE
                     LEDICIKAKDAVQGQIVGIDLMESKEKGLVVHEVNNTTEYKNTVRVTGVDIPALMIDY
                     AVQLRK"
     gene            9374..>9717
                     /locus_tag="VEJ68_03765"
     CDS             9374..>9717
                     /locus_tag="VEJ68_03765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HXX05919.1"
                     /translation="MDSSITITPSYSVKMLEKTLRLYTPSLSEKPLAEFLADKCDDLG
                     FENIRIDDVGNLIATKGSGSPKILLCGHMDTVPGKIKVRNEAGFIYGRGASDAKAPLM
                     AMLLAAASLQNN"
BASE COUNT         3376 a         1654 c         2120 g         2567 t
ORIGIN      
        1 agaacgaatt cagtgttttt ccgaatccct tgaaccttat catcccaagt ccaatcaagg
       61 taccaagaga gattgatatc aaaaatccag ccacaagcct gcctaaagtt atgcctaccc
      121 ccaaaggcaa cgagagattt gatgttagag taccaaaaga tactgcaacc atagctggag
      181 agggaagtga gattttgggc cagataccta gcatgaatac tagttgccaa acaccaacaa
      241 agattgctaa aagtaacgca gcattggctg catcatgaag attatgctgt ggtttattta
      301 acaaaatatt ttctgtcact ggttctcatc ttttatttgt gcaattactt cgctttttag
      361 tgcctcaaga atctgatgat aatatttttg aagattttca tcttctgcaa gtcttggtct
      421 cctgtaatcg atagcaattt ctttttttat tttagaaggc ctatttttga aaaccacaac
      481 ccgatttcct aaaattacgg attctgaaat gttatgagta acaaaaatta ttgtcttttt
      541 tgtcctctcc caaataagtt gaagttccac aagtaacaga tctcttgttt gtgaatcaag
      601 agcagcaaat ggctcatcca tcaataaaat ttcaggatcc atagcaagag ctcttgcgat
      661 agcaactctt tgtttcattc cagtagaaag ctgataagtg taagaatccg caaacttggt
      721 caattgcatc atgtcaagat atcgttgaga aatttcccgt cgctgttctt ttggaacacc
      781 agccattttt agtccaaact caacgttgtc aactacttta agccaaggaa ataatgcacc
      841 ttcttgaaat accaaagtcc tgtctggacc tgttgcatat actggtttgc cgttaagtaa
      901 aatctctccc gaatctggtt tttctaatcc tgcaacaata tttagaaaag tggatttgcc
      961 acatcccgat ggaccaacca agcatatgaa atcaccttct tcaactttaa gatctacacc
     1021 atctaaggca agaactgatt cgccattgtg gtcaaagtgt tttacaatac tttttgcttg
     1081 aagcttagtc atgagtagaa atcttctccc acttgtctga agaagtgctc ccaataggat
     1141 ccaaccaaac caaattcaca taacagcgtt ataatttatt ggttaaatat tgatcgaatt
     1201 ttagctcaga ctaataacct aattccagaa ttgggaaaat caattttaca atttcttggc
     1261 aaaataaaat gagaaaaatt aaagatcata aaagataaat gcgaaattct ggtcacagaa
     1321 aacctcaatg aaaggaaagg cagttttagc tttctctggc ggattagaca cgtctgttgt
     1381 cataaaatat ctccaagaac agcacgattt ggatgttgta actgttacaa tagatgttgg
     1441 acaaggagat gatcaaaaaa agattgccgc aaaagcaaag cgactcgggg ttctaaaaca
     1501 ttacaatata gatgcacgac aagagtttgt agataatttt atttttcctt caatcaaggc
     1561 aaatgcacta taccagaaaa aatattgtct tgcgacagca cttgcacgtc ctctgattgc
     1621 acaaaaagta gtagaggttg caaagaaaga aaatgcaaaa gctcttgccc atggttgtac
     1681 aggcaaagga aatgatcagg tgcgatttga tgttacaatg cgatcaggat ctaatctacc
     1741 aataattgca ccaattcgtg atctcaatct tacgcgtgat atagaattga aatttgcaaa
     1801 aaaacacggg atacagatcg atactgctgc aaagaggttt agcattgatc agaatttgtg
     1861 gggaagagca atagaaggag gagatttgga ggattccttt gaagagcctc cggaagatgc
     1921 tttcatttgg gtcaagacaa aaaatatgcc tgacaagccg cagtacttgg agatcaggtt
     1981 caatcaagga attcctgttg cagtggatgg aaagagtctc aaaccaatag aattgattga
     2041 atacatcaac aaaaaagcag gaggctgtgg tgtaggtatc gtggatcaca tagaggacag
     2101 agtggtagga ataaaatctc gtgaagttta tgaaacacct gcagcgcttg ctatcattga
     2161 agctcacact gatcttgaaa aaatggttct cacaaaacat gagttaaagt tcaaagcaat
     2221 tgtagattca gaatgggcat ggttagctta ttctgggctc tggcaagacc cattgaaatc
     2281 tgatttagat atgtttatca atgcgtcaca gaagagagtt agcggaactg taaaattaaa
     2341 aatgttcaaa ggaagtttac gagttgttgg aagaaaatca ccttattcat tgtatagcca
     2401 tgacttggca acatatggaa aaggttccac ttttgatcag actcttgcaa aaggatttgt
     2461 tgaattgtgg ggacttcaat ctacagaagc taataaatta ctaaaaaaga ggtgagagat
     2521 taaagaatga attgtccaga atgtgatggg aatatgaaaa ttccagacga tgcaagtgtt
     2581 ggagagatag tctcttgtcc tgactgtggt gcagattttg agattgcttc aaaaaatggt
     2641 agcgtatgcg aattaaaaca tgctgaaaaa gtaggcgaag attggggaga gtaaatgccc
     2701 aaagtccgta tcgtgtttga tagaattcgc ttagaggaga aaatgcttga agaaaaatca
     2761 aaggagttag gacacgatac gaagatgatt gatgccaaga caacacacat caatactgaa
     2821 agcaagaaaa gtaattttga ttttggcgat gttgtactag aaagatgcgt aagctacttt
     2881 cgtggccttc atttcacatc atgcctagaa tttcttgatg ttcccgtttt gaacaggttt
     2941 gaggttgcaa ataattgtgg aaataagatg ataacgtcac tgctattaaa gaaacaaaat
     3001 gttccaactc caaaaacatt cttttctttt tcttctgaga ctgcacttga gatcttagaa
     3061 aaagaaggat acccacttgt catcaagcca atcataggaa gttggggaag aggggttata
     3121 ctattgaagg atagggatac agcagatgca attattgagg taagagaact aagtgatggt
     3181 cccttggaca gaatatacta tttgcaagag gctgtaaaaa ggcctccaag agacattcgt
     3241 gctatagtag taggtgacca agtcattgct gcaatgtata gaacatcaac tggtggattt
     3301 aagacaaaca ttgcactagg cggggaacca gtactatgcg agattaccaa agatattgag
     3361 gatatttgta tcaaagcatc aaaagcagta ggtggaggaa ttcttggagt cgatatcatg
     3421 gaagatgaaa aaagaggata tgtagttcac gaagtgaaca atactgtaga gtttaaaggc
     3481 ttggcaaaag ttgcaaaacg aaatattcca aaagaaatga ttgattatgc agtaagtttt
     3541 gctattagat aatttagaat ttagaaaatt ttagagttta aattatacta cgttatgcta
     3601 ggagaatatc aatgagaata ggagtaatag gagcatcagg atatgtcggt ggagaaattc
     3661 ttaggttact tgttagtcat ccaaaggttg agatctcaat ggttacctca agacaatatg
     3721 ttggagaata catttccaga gtccagccaa gtctcaaggg atttactgac ctaacatttt
     3781 ctgagctcaa ctatgacaag ttgtcagaca aatgtgatct ggtgtttacc tctgtaccac
     3841 atggtactgc tgttgatatc gtaaaagaac tgtatgatcg tggaatgaaa gtgattgatt
     3901 tgagtgcaga ctatagattg cataatgctc cggattacga caagtggtat ggttggaaac
     3961 atacgcatcc agattatcta cccaaatctg tatttggagt tccagaactt cacagagaag
     4021 agatcaaaaa ggcacagcta gtttcgtgtc ctggatgcat ggcggtaaca tcaattcttg
     4081 gattatatcc ccttgtcaaa aaaggcatca ttgataccga acatatcata gtagactcta
     4141 agattggttc ttatggtgcg ggagcaggca cagaagcagg cactcaccat gcaatgaggt
     4201 ccggagtcat acgaccatac aaaccagcaa agcatagaca cacaggagag atagaacaag
     4261 aactaagcca agcagctgga aagaagatca aggtatcaat gagtcctcat gcagtggata
     4321 ttgtaagagg aattttatgt acaaatcaca cttttcttac taaacaagta agtgagatgg
     4381 atctttggaa gatgtatcgt gaacagtatc aaaatgaaaa gttcatcagg ctaatccgtg
     4441 acaagaaggg attctacaag tttcctgatc ctaaatttgt tgtaggctcc aacttctgcg
     4501 atgtaggatt tgacattgat gaagataaca acagactagt cgtactatct gcatcagata
     4561 atttgatgaa gggagctgca ggttctgcca tacaaaacat gaatgtaatg gcaggatttg
     4621 atgaaatgga cgggataaga tactccccac taactccagt gtaaaaagat gattacaata
     4681 aagataggag gaagtgtagt agatggtctt catccatcaa ttattgcaga cttgaaaaag
     4741 gtatcagaaa atgaaaaagt aattctggta cacggcggtg gaaaagaagt taccaagata
     4801 tcagaagctc ttggaaaaga acaaaaattc attgtatctc ccggcggaat caaaagcaga
     4861 ttcactgaca aggagacagc tgaaattttc acaatggtaa tgtcaggcaa gataaacaag
     4921 atgattgtcg gaatgctaca gaaaaacgga atcaatgcag tgggtctttc tggtgtcgat
     4981 ggaaagataa tccaggctga gcgaaagaag aaattgattg taatcaacga aaaaggcaga
     5041 aagatggcaa tcgatggagg atacaccggc aaaattcagg aagtaaatac cgacctcata
     5101 aagttgatgt tggacaaggg atatgttcca gtaatctctc caattgccat tagtgaagag
     5161 tttgactttc taaacgtgga tggagataga gccgcagcat atgtagcagg taaaatgaaa
     5221 tcagacaaga tattatttct tacaaacgtc aatggattgc ttatggatga caagttggtt
     5281 acaaagctaa ccttggcaga ggcaaaagaa attctaccaa agataggatt tggcatggaa
     5341 aagaaaatac ttgccgcaac agaagcaatt gagatgggtg taaagcaagc attaatctca
     5401 aatgggcaaa gagaaaaccc aataacagta gccattgcaa atgacaattg cacggtgatt
     5461 gaaaaatgac agaagatcaa ttcatgggaa atatctacca gaggtttcct gttaccatag
     5521 agcgaggatt aggttctcat gtttgggaca tcaatggtaa agaatacatc gattgtatgg
     5581 gtggatatgg tgtagccatt gttggacact gcaacccacg agttgttcac aaaataaaag
     5641 aacaactcga taaaataatc acagttcaca gttcactgta caacaaaacc agggaagagt
     5701 ttcttgaaag acttgccaag atagcaccat ctggactaaa ccaagtgttt cttaataaca
     5761 gtggaacaga agcagtcgaa gctgcaataa aatttgcgcg taagtttact ggaaagaagg
     5821 gattggtagc catgaatgga tcgtatcatg gcaaatcata tggttctctt tcagttacat
     5881 tcaatccaaa atatcgcaag gcattcgagc ctctactaag caatgtctcc ttttctccat
     5941 ttggagacat tgaagcatta aaatcaacaa taaatcaaga cacggcatta attatacttg
     6001 aaccaattca gggagagagt ggaattcatg ttgccccaga tggattcttg caagaagtaa
     6061 gaaagatttg taatgaaaat ggtatagtct tggtcttcga tgagattcaa tctggcatgg
     6121 gacgaactgg aaagatgtgg gcaagtcaac attgggaaac ggttccagac atcatgtgtc
     6181 tagcaaaagg aattgcggga ggagttccta tgggtgctac tcttgttaaa cctgaaatcc
     6241 tagcttgtat tggaaaaggc gagcaatcat ccacatttgg tggcaatcca ctttcatgtg
     6301 cagcaggaat tggaacaatt caggcactta cagaagatgg attggtagaa aatggtgcaa
     6361 agatgggcaa agtatttcga gaagggttag agagattaaa agaaaagcac aagataatcc
     6421 gtgaagtacg cggaaaagga ctaatgattg gaattgagat gaaatttgaa gtcaaggata
     6481 tcttatttga tgcaatggca aataacttgc tattattgta ctctggcaag aacatactca
     6541 gactattacc tcctcttgta atctctgaac ctgatatcac caaagcttta gaaacacttg
     6601 acatcataat aacaaaggag aaacagagaa gaaatgtcta gtgacaaaac ggacgaaacc
     6661 ataattgaga tgttaaaaaa agactctaga caatctttcg ttgaaatagg agaaaaactt
     6721 ggtctttcag aatcagcagt aagaagaaga gtaaagaatc taactgacgg cggagcgata
     6781 aagaaattca caatagaaac aggagattcc aattctacca gtgcaataat tctgatttcc
     6841 gtggactcgg caactgatac atcaaaggtt tcagcaaaac ttgtcaggtt accaggagtt
     6901 cacacggttt acgaaataac aggacagtat gacattgctg caatcataag agcacctact
     6961 ataacagaca ttaatgtctg cattgattct ttacgtaaag tgccaggcgt ttttgatacc
     7021 aatactgtta ttattttgag aaccatatca taaaacgaaa ttcggctttg tacaacgact
     7081 attagcgtta atcgttacaa aaacgccaac attagccgaa ttctgtacga atatgtttat
     7141 atttgtttta tcgtgatact aagaagtaat ggacgatcca aactattacg catacaagta
     7201 taatgagatg ggtgttaaac caaaaaagat acacatctta gatagtactc taagagaagg
     7261 agaacaacat ccaggtgtta cattttcaaa taaacaacga attcagatag catggatgct
     7321 tgattatttt ggtgtagacc agattgaaat ttcaccagtg gtatcaccag atcacaagga
     7381 agcaaccaag acaataatca aacaaggctt gaaagcagat attgtagctc atgtgcgagc
     7441 actccgtgaa gatgtagatg tagcacttga ctgtggtgca acatggatgg caacttatct
     7501 tggaatctct gacattcaca tgaaagacaa actcaggatt actccagagg aggcattaag
     7561 aagagcagtg gacacagtag aatatgcaaa atcgcatgga ctgaagatgc gatttacagt
     7621 agaagatggt agtagagcag atccagaatt tctaatcaag gtttgtaaag caatatcaga
     7681 tgttggcgtt gacagaatca gtattccgga cacagttgga ataatgagac caaatggtat
     7741 gtacaatttg gtaaagaccg taagagatca gataaagaca cctcttgatg tacactgtca
     7801 taatgatatt ggattagccc tggcaaacgc attagccgga tgtgatggtg gtgcagatca
     7861 aatacataca actatagatg gcattggaga aagaacaggc attcctgcat tagcagagac
     7921 tgctgttgct ttgacttatc tttacagatc tcccaataac tttaggttag atatgctaat
     7981 ggacctctca agactaattg aacaatatac aacaatagta ccctatgatt caaagccgat
     8041 agtaggagcc acagcataca aacacaaggc tggaacacat ttggctgcaa tcttgcgaaa
     8101 tccagctgct tacgagccaa ttgaacctaa ggttgttggt aacagaagaa gaatagtctt
     8161 tggagaactt gcaggaaaga atggtgctgc atatctcatg tcactcttag gtcttgacca
     8221 agatgatgag catgcaaaga aagtggctgc aggtctcaaa aatctaagga tgggagattt
     8281 acttgagata ccactggatg acagacttga aagaaagata attaatgaca cccaaatgaa
     8341 ggtaaagaca ggaaaataat atgaaatgtc tagaatgtga tgccaacata aatcctccaa
     8401 aggattcaat ggaaggagaa atagtaacat gtcctgattg cggggcaagt tttgagttag
     8461 caaagagttc tgcaggcttt gagttaaaac cagcacaaac tgttggtgag gactggggcc
     8521 agtgagctca gggttatcga tactttacga taccatcaga tgggaagaaa aagctctgtt
     8581 tgatgccgca aagaaaaaga atgtaaacgc aaagatggta gattgtaaag gattatctgt
     8641 caacttggat agtagtgtgg aagaatttgg tactgttatt caaagatgtg taagctacta
     8701 tcgtagtctt cattcaactg cagcacttga aggaaaagga atcaatgtca tcaactcttt
     8761 gaatacaagc attcttgctg gaaacaagtt gttcactcac atgttactag taaaaaataa
     8821 catccctact ccgtttagtg ctgttgcctt ttcagaggag gcagctcttg aattccttga
     8881 caaacaagga tacccaatgg ttctcaagcc aacagttggt agttggggaa gaatgattgc
     8941 cttgctaaag gatcgtgatg ctgcggaagg aataatggag acaagagaga agatgtaccc
     9001 aatttaccaa gtatactatc ttgaagaatt tgtagagagg cctccacgag atattagagc
     9061 cataatggtt ggagacaaag ttgttgctgc catataccga tactctggag agggccagtg
     9121 gaagacaaac atggccttag gaggcaaagc agagccgctg aaggtaacaa aagagttgga
     9181 agatatctgt atcaaggcaa aagatgccgt tcaaggtcag atagtaggaa tagatctcat
     9241 ggaaagcaag gaaaaaggcc tggtggtaca cgaagttaat aatacaacgg aatacaaaaa
     9301 taccgtaaga gttactggcg tagatatacc agccttgatg atcgattacg cagttcagtt
     9361 gagaaagtaa gaattggact cttcaattac cattacccca agttattcag taaagatgct
     9421 agagaaaact ctaagactat acacaccttc cctttctgaa aaaccacttg cagaattttt
     9481 agcagacaag tgtgatgatc ttgggtttga aaacataaga atagatgatg taggaaattt
     9541 gatagcaacc aagggctcgg gctctcccaa gatactactt tgtggacaca tggatacagt
     9601 tccaggcaag atcaaagtac gaaatgaagc tggtttcatt tatggccgag gagcttctga
     9661 tgcaaaggcc ccgcttatgg ccatgttact tgctgctgcg tcacttcaga acaacaa
//
LOCUS       DASPUS010000162         5949 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1731315, whole genome shotgun sequence.
ACCESSION   DASPUS010000162 DASPUS010000000
VERSION     DASPUS010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5949)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5949)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5949
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1731315"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..386
                     /locus_tag="VEJ68_03770"
     CDS             <1..386
                     /locus_tag="VEJ68_03770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="TrmB family transcriptional regulator"
                     /protein_id="HXX05920.1"
                     /translation="KIKEMIATAKEEFLMFCTQKDFARFYHADLVHLLVKSPAYEKVI
                     ISPAQLKPDISDDINKERIRVQPTGKTDNLCFLVKDSTEVLMFLRNANHPSHNTFAVW
                     SDSKSMVDSMTTLFNYSWENSELLY"
     gene            complement(440..1246)
                     /locus_tag="VEJ68_03775"
     CDS             complement(440..1246)
                     /locus_tag="VEJ68_03775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05921.1"
                     /translation="MQTNFEKLKPYRFLIFSLPAIGFPVLITNFFGKQIAATTTDILF
                     VPLSGTLFVLSVIIAKRFNGKGNHGVGYLCFCGFAATWFIAELVWAISEISNHLSPFP
                     QIDEYFYLAGYPLLLLFTYYYLKPVGIAISKKMLGLAALTSVAFLTPTFYTIYSYNPD
                     ASISQILWAGIYPIADAILLFPTVIGMIMFFKGDVSMLWSLMFFAILLNVVADSGFLY
                     LDVDKSYYSGNPINILYLWAYVLFSFGLYSHIKVFRKPKMKSYGNVDEFK"
     gene            complement(1250..1546)
                     /locus_tag="VEJ68_03780"
     CDS             complement(1250..1546)
                     /locus_tag="VEJ68_03780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05922.1"
                     /translation="MELSKNQDMPSRKELLAFAVEDALNEMGEPTFEIISNKLIQKYH
                     CTLVECVDKPDYLANVLKETFGHAYIAVLAKIKKNLGEFGAEQPVEEFIKVLSR"
     gene            complement(1562..2422)
                     /locus_tag="VEJ68_03785"
     CDS             complement(1562..2422)
                     /locus_tag="VEJ68_03785"
                     /inference="COORDINATES: protein motif:HMM:NF022932.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HXX05923.1"
                     /translation="MKEGVEKIQINVFEAEPGSNLYTHKLNLQKVTEELLKFGLSTNQ
                     AKIYIYLGKYGPKTAAEVYKSLELPRSETYFILNTLQNRGIIESELSSPTKYSAISLD
                     KALSTLVNAEKEKLDILSQQKKELTELWDVIPSYIVETNETKAEKLQMVQGSAVIHNK
                     IKSMIASAKQEALIFCTEKDLSRFYHAEILDSLSNSLLDVRIILSPAQGIPNFLADID
                     KKIIRVMPMSVTDNQCFIIMDSNEILFFLRNATHASHNLFALWADSKSLIDSMHSLFD
                     YRWDNSEVCH"
     gene            2785..4185
                     /gene="sufB"
                     /locus_tag="VEJ68_03790"
     CDS             2785..4185
                     /gene="sufB"
                     /locus_tag="VEJ68_03790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HXX05924.1"
                     /translation="MTSENLDMDYSKYDFKDSTEMYVYTSKKGLSREVVEEISRMKKE
                     PQWMLDFRLRSYDIFMKKPMPNWGGDLKQIDFNNIYYYAKASEKTEKDWDNVPAEVKA
                     TFDKLGIPEAEKKFLAGVGAQYESEVVYHSLREDLAKKGVIFLDTDTALKEHPDIFKK
                     YFGKVIPPEDNKFAALNSAVWSGGSFIYVPKGVKVDMPLQAYFRINKENIGQFERTLI
                     IADEGAEVHYIEGCTAPVYSSESLHSAVVELIAMKDGKLRYTTIQNWSNDVYNLVTKR
                     AYAYEGARVEWIDGNIGSKLTMKYPGIYLMGQRAHGETLSIAFAGKNQHQDTGAKMVH
                     LASNTTSRITSKSVSKNNGRTTYRGLLHVAKGSTNVKASVRCDALLLDDISKTDTYPY
                     MEINQEDATITHEATVGKIGDEQIFYLMTRGFTEEEALTLIVNGFIEPFTKELPMEYA
                     VELNRLIKLEMDGSVG"
     gene            4215..5615
                     /gene="sufD"
                     /locus_tag="VEJ68_03795"
     CDS             4215..5615
                     /gene="sufD"
                     /locus_tag="VEJ68_03795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HXX05925.1"
                     /translation="MSSFVLSKLDSNHVEEISEANNDPTWLKDYRKNSFSIYQQLPSE
                     VSPLYNKYTDANRMDSSQIVLSLSSDSTIPEFVKDRLAEISENPYIVQIGTNIYKISI
                     PMELKSKGLVICSIQDAIKDHSDKIKKSFEQIDPKRDKYIALNSAFFNSGIFIYIPQN
                     LVLEKPIHIISSLALDQTSTISRNIIIGDENCKASMVQELYAPKSEKQQAYLEVLDVT
                     VGQNSQVDMITLQAMELSSVNFSSRAARIARDAKMDWYLGLFGSYLSRYQIDNHLNGI
                     GANAHDTEVIFGNKTQSFDLASNLIHNAPSTIGRVLEKSVLKDTSKSLFKGMIRIEKD
                     AHHAESYLAGHSILLDKGAKSDSIPGLEIFTNDVKATHSASVAQMDDEQLFYLASRCL
                     SKSEAQKIIVEGFLEPLSRKMSYQIRAWISYLIESKWLGRDLTIKTDEQLKALLEVEE
                     TRYRETDIFESHYKYR"
     gene            5620..5931
                     /locus_tag="VEJ68_03800"
     CDS             5620..5931
                     /locus_tag="VEJ68_03800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme iron oxygenase ferredoxin subunit"
                     /protein_id="HXX05926.1"
                     /translation="MSEWVNVCKTSQLKKGDMIDFDYNDKKILVANLNGQFYATDRIC
                     THAEADLSTGILNEEGVTCPLHLSTFDLKTGVPQNLPAEIPLKTYNVKIEQNEIYVEV
                     E"
BASE COUNT         2050 a         1056 c         1064 g         1779 t
ORIGIN      
        1 taaaaattaa agagatgatc gctaccgcta aagaagagtt tctaatgttt tgtacacaaa
       61 aggactttgc aagattttat catgcagatc ttgttcattt actcgtaaaa tctcctgctt
      121 atgagaaagt catcatatca ccggctcaat taaagcctga tatttcagat gacattaaca
      181 aagaaaggat tagagtgcaa ccaaccggga aaacagataa tctctgtttc ttagtaaagg
      241 attctacaga agtccttatg tttctaagaa acgcaaatca tccttcacat aatacatttg
      301 cagtatggtc tgattcaaaa tcaatggtag attccatgac tactctattc aactattcat
      361 gggaaaattc agaactcctc tactaaaatc tccttctttc aatattataa tcattgacaa
      421 tcatacggtg ttagatatat tatttgaatt catctacgtt tccatacgat ttcatttttg
      481 gttttctgaa tactttgatg tgactgtaaa gaccaaatga aaacaaaaca taggcccata
      541 aatacaatat gttgatggga tttcccgaat agtatgactt gtctacatct agatagagaa
      601 aaccagaatc tgcaacgaca tttaatagaa ttgcaaagaa catcagtgac cataacatgc
      661 ttacatcacc cttgaaaaac ataatcattc caattactgt gggaaacaaa agtattgcat
      721 ccgcaattgg ataaatgcct gcccaaagta tctgagatat acttgcatca ggattgtaac
      781 tatagatcgt gtaaaaagtt ggagtcaaaa atgctacact tgtcaaagcg gctagtccta
      841 gcattttttt tgagattgca attcctacag gtttcagata atagtatgta aataataaaa
      901 gtaaaggata acctgcaaga tagaaatatt catcaatttg aggaaaggga gaaagatggt
      961 ttgatatttc tgaaattgcc cagactagtt cagcaataaa ccaagtggca gcaaaaccac
     1021 aaaaacaaag atacccgact ccatgattcc cttttccatt aaatctttta gctatgatta
     1081 cagataatac aaaaagtgtt ccagaaagag gaacaaaaag aatatccgtg gttgttgctg
     1141 ctatctgctt tccaaaaaaa tttgtaatta agacgggaaa gcctattgcg ggaagagaaa
     1201 agattaggaa tcgatacggc tttagctttt caaaattggt ttgcaagtct tatctggaga
     1261 gcactttaat gaattcttca acaggctgtt cagcgccaaa ttctcctaga ttctttttga
     1321 tttttgccaa gactgcaata tacgcatgac caaatgtttc tttgagaaca ttggctaaat
     1381 aatcaggctt gtctacacat tccactagtg tacaatggta tttttggatg agcttattac
     1441 tgattatctc aaatgtgggt tcgcccatct catttagcgc atcttctact gcaaaagcca
     1501 atagttcttt tcttgaaggc atgtcttgat tcttactcaa ttccatctac aactcctttt
     1561 atcaatgaca tacctccgag ttatcccacc tgtaatcaaa caatgaatgc attgaatcaa
     1621 ttagtgattt tgaatcagcc catagtgcaa aaagattatg tgaagcatga gttgcatttc
     1681 ttaaaaagaa caagatctcg ttactgtcca ttataataaa acattgatta tctgttacgc
     1741 tcatcggcat taccctgatt atctttttat caatatctgc caaaaagttt ggaattccct
     1801 gagccggtga tagtatgatt ctgacatcaa gaagggagtt tgacagagaa tctaaaattt
     1861 cagcatgata aaaccgtgac agatctttct cggtacagaa aattagagct tcttgttttg
     1921 cactggcaat catactcttg attttgttat ggataactgc acttccttga accatttgta
     1981 atttctcagc tttggtttcg tttgtttcaa caatgtagga tggtattaca tcccacaact
     2041 cagttaattc ctttttttgt tgtgataaaa tgtcaagctt ttccttctca gcatttacta
     2101 gagtagagag agctttatct aaagagatag cagaatattt ggttggagaa gaaagctctg
     2161 attcgattat tccgcggttt tgtaaagtat tgagaataaa gtatgtttca cttctaggca
     2221 attccaacga tttgtaaact tccgctgcag tctttggacc atattttcca aggtaaatgt
     2281 atatttttgc ttgattagta gacaatccaa attttaagag ctcctctgta actttctgga
     2341 gattcagttt atgagtatac aagtttgaac caggttctgc ttcaaataca ttgatctgta
     2401 tcttttcaac tccctctttc aagacacttt tttaatcgtc gctgacatat acagtttttg
     2461 gtttataaca cgaatgatcg aacaacttcc attaatggaa atatttctct catgttactt
     2521 tgattcaatt atacaataaa actgcagaaa gtcttcaacc aattacaaca tctcatttcg
     2581 atctagaatt tttctaaata aaaaattcct atgtaaaaac acaaagatca attttcttgc
     2641 ttgttgattc tacaaatata gaatgacgat gttagctcta cctaagaatt ttttgaaaca
     2701 agtttgattt agcttggcct actccgctgt acaagtatga agtggtgtgt aactttttta
     2761 taacataacg gtgttatgtc aatcatgacc tctgagaacc tcgatatgga ctatagtaaa
     2821 tacgatttca aagattctac tgagatgtat gtttacacaa gcaaaaaggg cttgtctaga
     2881 gaagtggtcg aagagattag cagaatgaag aaagaaccac aatggatgct agactttaga
     2941 ctaagatcat atgatatttt catgaaaaaa ccaatgccca attggggtgg tgacttgaaa
     3001 caaattgatt ttaacaatat ttactattat gcaaaagcat ctgaaaagac agaaaaagat
     3061 tgggataatg taccagctga agtaaaggca acttttgata aacttggaat tccagaagca
     3121 gaaaagaaat tcctagcagg tgtaggtgcg caatatgaat cagaggttgt atatcacagt
     3181 ctacgagaag atcttgccaa gaaaggtgtc attttccttg atactgatac tgcattaaaa
     3241 gaacatcctg atattttcaa gaaatatttt ggcaaggtaa ttcctccgga agacaacaag
     3301 tttgcagccc ttaacagtgc tgtatggagc ggtggttcat tcatctatgt tccaaaggga
     3361 gtcaaggtag atatgccatt gcaagcatac tttagaatta acaaagagaa tattggccag
     3421 ttcgaaagaa cattaattat tgctgatgaa ggtgctgagg ttcactatat agagggatgc
     3481 accgcaccgg tttactcatc agaatccttg cactctgcag ttgtagaatt gattgcaatg
     3541 aaggatggaa agctccgata tacaacaatt caaaactgga gtaacgatgt ttacaatctg
     3601 gttacaaaga gggcgtatgc gtatgagggt gctcgagtgg aatggattga tggaaacatt
     3661 ggaagtaagc ttacaatgaa atatccagga atatacctca tgggacagag agcacatggt
     3721 gaaacgttat cgattgcatt tgcaggaaag aatcaacacc aagatactgg cgctaagatg
     3781 gttcatcttg cctcaaatac tacatcaaga attacatcaa aatctgtaag caagaacaat
     3841 ggcagaacaa cttatagagg attacttcat gttgcaaaag gctcaacaaa tgttaaagca
     3901 tcggtgagat gtgatgctct gttacttgat gacatatcaa agacagacac ctatccatac
     3961 atggaaatca atcaagaaga tgctacaata actcatgaag caactgttgg aaaaataggt
     4021 gatgaacaaa tattctacct aatgacaaga ggttttacag aagaagaggc attaacacta
     4081 atagtaaacg gattcatcga accattcaca aaagaacttc caatggaata cgcagtagag
     4141 ctgaatagac taattaaatt ggaaatggat ggctcagtcg gctagtccga ctaggtcaat
     4201 ctcagtagtc agatatgtca tcatttgttt tatcaaaact tgattcaaat catgtagaag
     4261 agatatctga agccaacaac gatcctactt ggttaaaaga ttacagaaag aattcatttt
     4321 caatttatca acaactccca tcagaggtat ctccacttta taacaaatat actgatgcta
     4381 accgaatgga ttcgtctcag atcgtacttt ctttgagctc tgatagtaca ataccagaat
     4441 ttgtaaaaga cagacttgct gaaatctcag aaaacccgta catagttcag attggaacaa
     4501 acatttacaa aattagtatc ccgatggaac tcaaatcaaa aggccttgta atctgttcaa
     4561 tacaagatgc aataaaggat cattctgaca agatcaaaaa atcttttgaa caaatcgatc
     4621 ctaaacgtga caaatacatt gcactcaata gcgctttctt taattccgga atttttattt
     4681 acattccaca aaatctagtc ttagaaaaac caattcatat aatatcatca cttgctcttg
     4741 atcagacttc aacaatatca agaaatatca tcataggaga tgagaactgt aaggcttcta
     4801 tggttcaaga gctatatgct ccaaaatctg aaaaacagca agcatacctt gaagttcttg
     4861 atgtaacagt tggtcaaaac agccaagtag atatgattac gttacaggca atggaactat
     4921 catctgtcaa cttttcatca agagcagcaa gaatagcacg cgatgccaag atggattggt
     4981 atcttggctt atttggttca tacctgtcta gataccaaat tgataatcat cttaatggaa
     5041 taggtgcgaa tgcacatgat actgaggtaa tttttggaaa caagacacaa tcgtttgact
     5101 tggcttctaa tcttatacac aacgctccat ctactattgg acgagtcttg gaaaaatcag
     5161 ttctcaaaga tacttcaaaa tctctcttta agggaatgat tcgaatagaa aaagatgctc
     5221 accatgccga gtcctattta gctggtcatt ccattctctt ggacaaggga gcaaaatctg
     5281 attctatacc aggacttgag atttttacaa acgatgtcaa ggcaactcac tcggcatccg
     5341 ttgcccaaat ggatgatgaa caacttttct atcttgcatc aagatgtctt agtaaatctg
     5401 aagctcagaa gattattgta gaaggatttc ttgaaccgtt gtcaagaaag atgtcttacc
     5461 aaattcgtgc ttggataagc taccttattg aatcaaaatg gcttggtaga gatcttacaa
     5521 tcaaaacaga cgaacagctc aaagcactgc ttgaagtaga agagacaaga tacagagaga
     5581 ctgacatatt tgagagtcat tacaaataca ggtgagcaaa tgtctgaatg ggtaaatgtt
     5641 tgcaaaacca gtcagctgaa aaaaggtgat atgattgatt ttgattacaa tgataaaaaa
     5701 attctagtag caaatctcaa cggacaattc tacgctacag atagaatatg tactcatgca
     5761 gaagccgact tgtctactgg catactaaat gaggaaggtg taacctgtcc actacatctc
     5821 tcaacttttg atcttaaaac tggggttcca caaaatcttc cagcagaaat tccattgaaa
     5881 acctacaatg ttaaaataga gcaaaatgaa atctatgttg aggtagaata aattgcagac
     5941 aagtataat
//
LOCUS       DASPUS010000163         4326 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1040611, whole genome shotgun sequence.
ACCESSION   DASPUS010000163 DASPUS010000000
VERSION     DASPUS010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4326)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4326
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1040611"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(213..1073)
                     /locus_tag="VEJ68_03805"
     CDS             complement(213..1073)
                     /locus_tag="VEJ68_03805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05927.1"
                     /translation="MIKLKIVTIILVSCGLLHMDYILGDESSSCQPHNICVHPGDYLR
                     YEIIVGQTNSSESYYFGDMPDHNDIKVNETYSSTSSVENTTFILDLTTGYGHSVQENS
                     TTIPFLMILPTPIMYDQNDSSISKESKNFNGFNRDALAATRISNSGTLVMEYDIQTGI
                     LISAHSIDPAKQSDQPTIEYSNNLVGTNIINSDSVTNIISVPAWIKNTAGWWASDTID
                     DTSFVKAIQYLISNKIIQIPHGQSGHISSQKIPAWIKSNAQWWSQGKISDNEFISGIQ
                     YLIGAGIVQV"
     gene            1120..3198
                     /locus_tag="VEJ68_03810"
     CDS             1120..3198
                     /locus_tag="VEJ68_03810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HXX05928.1"
                     /translation="MAFDGSIQISICIKKIVEPNNLIKESSPYLLQHAYNPVKWYPWN
                     NDALTRAKQENKPIFLSIGYSACHWCHVMAHESFENDEIAHFMNENFINIKVDREERP
                     DIDDIYQKVCQLVTGSGGWPLSVFLTPDQRPFYIGTYFPPLDNYGRPGFGSIIRQLSQ
                     AWKEKPHDVEAAAENFMNSLQRTESISSQSKLDRSILDEGALNLLSLADQINGGFGNA
                     PKFPNVANLSFLLRYSRMSGIAKFQEFVFKTLSKMANGGIYDQVGGGFHRYSTDSRWL
                     VPHFEKMLYDNALLPTVYAEAYQITKDPKYLEIVNQTLSFVLREMTSDEGGFYSAQDA
                     DSEGEEGKYYVWSKGEIEQLLGKDAELFCLYYDVIQGGNFEGKNILHNNINQSSVSFQ
                     FGKSELETMEIIRHCKEKLYETRIKRIHPGKDDKILTSWNALMITGFLKGYRVTQHDE
                     FLKAATRCIDFIEQKITKNGTLLHTYKNGEAKLNAYLDDYAYFINALLDYFEIMPTKK
                     YLDLAVHYANYILQHFWDENEKNFFFTADNHEKLIIRTKNIYDLSLPSGNSVAASVML
                     RLYHITQDKRFLETSLKVMESLATMSAENPFGFGQLLNVIYMFLQKPIEITVINKMNP
                     EIYEYLTKKFLPEAILVTVSDHDDLATLRHLPFFAGKDYDVRKTKVYICRDFTCSLPL
                     GTTKEIERLL"
     gene            complement(3195..3515)
                     /locus_tag="VEJ68_03815"
     CDS             complement(3195..3515)
                     /locus_tag="VEJ68_03815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05929.1"
                     /translation="MSELVQYQIQQLVDNGQTVQLTLAEDVQTEPISQKQLMLEAINK
                     KLEPELREQILPFLEAILQAQPTISIKSYAQTSIIITMPKRRYERMGSPQVGQKLEIN
                     IKKS"
     gene            complement(3584..3865)
                     /locus_tag="VEJ68_03820"
     CDS             complement(3584..3865)
                     /locus_tag="VEJ68_03820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05930.1"
                     /translation="MIPATTRSFIDNLADYYISEAASYRQMATIYADEVGDIPAATFG
                     LIVGSIYSAFLQTYDNQKQKPPLEDIQEFTQIIKRKAAQIKRSILDAEK"
     gene            4006..>4326
                     /locus_tag="VEJ68_03825"
     CDS             4006..>4326
                     /locus_tag="VEJ68_03825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05931.1"
                     /translation="MKNSTRRFILIATMLVLLNSGIYFVTAYSQMRESNDVASQMQTM
                     LFTTAAITYLPLGIWMVKNGLHSKAPYIIAILISIALIGLYIASRTIALPIVGIQGDV
                     GLIDV"
BASE COUNT         1410 a          751 c          789 g         1376 t
ORIGIN      
        1 taactagact aaatcctcat caatttcttc tattggatcg atatactgtt tacaagtaca
       61 attaggaaca aggcatctcc ctattttcaa taaggatttg ctactgaggg agggttcatg
      121 tgcatcatct atgtggtgac atcgcttaca attcatactt gaagattttt tggtcgtatt
      181 tagtatttga atttagatgg aacaaaaaac acctaaacct gtacaatgcc agcacctatt
      241 agatactgta ttccagaaat gaactcgtta tcggaaattt tcccctgtga ccaccactgt
      301 gcattacttt ttatccatgc aggaattttc tgtgatgaga tgtgacctga ctggccatgt
      361 ggtatttgaa taattttgtt tgatattagg tactggatag cctttacaaa actagtatca
      421 tcaattgtat cagacgccca ccagccagct gtgttcttta tccatgctgg aacagatatt
      481 atatttgtta ccgaatctga gtttatgatg ttggttccta ccagattatt tgaatactct
      541 attgtaggtt gatcagattg ttttgctgga tcaatagaat gagcactgat taggattcct
      601 gtttgaatat catactccat aactaatgtg ccactgttgc taattcgtgt tgcagcaagg
      661 gcatctctat taaaaccatt aaagttcttt gattcctttg atattgaaga gtcattttgg
      721 tcatacatga tgggcgttgg caatatcatg agaaatggaa ttgtggtaga attttcttga
      781 acagaatgtc cgtatccagt agttagatct aaaataaaag tggtattttc aacgctactt
      841 gtactagagt atgtttcatt tacttttatg tcattatgat ctggcatgtc cccaaaataa
      901 tatgattcag aactattggt ttggcctaca ataatttcat acctaagata atccccagga
      961 tgaacacaaa tattgtgagg ttgacaagat gagctctcat cgccaagtat gtaatccatg
     1021 tgtagtaaac cacacgaaac aagaataatg gtaacaattt tcaattttat catttatttg
     1081 cacactacgg cagatacaca aaactgtttc tatggaatta tggcatttga tggatcaata
     1141 caaatatcca tttgcattaa aaaaattgtg gagcccaata atctgataaa agaatctagt
     1201 ccatatctct tacagcatgc ctataatcct gtcaaatggt atccatggaa taatgatgca
     1261 ttaacaagag caaaacaaga aaataaacca attttcctaa gtataggtta cagtgcttgc
     1321 cactggtgcc atgttatggc acacgagtcg tttgaaaatg atgaaattgc tcatttcatg
     1381 aatgagaatt ttataaacat caaagttgac agggaggaaa gaccagacat tgatgatatt
     1441 taccaaaaag tctgtcaact agttactggc agtggtggtt ggccactgag tgtatttctt
     1501 acaccagatc aacgaccatt ttacattgga acatattttc caccccttga taattatggg
     1561 cgaccaggat ttggaagcat cattcgtcaa ctatctcaag cttggaagga aaaacctcat
     1621 gatgtagaag cagccgcaga aaatttcatg aattctctac aaagaacaga atcaatttca
     1681 tcacaatcaa aacttgatcg ttccatacta gatgaaggtg ctcttaactt actttcgttg
     1741 gcagatcaga ttaacggggg gtttggtaat gcaccaaaat ttcccaacgt ggcaaatctc
     1801 tcatttctat tacgatattc aaggatgtca ggaattgcaa aatttcaaga atttgtattc
     1861 aaaacgctat ctaagatggc aaatggaggg atatatgatc aagtaggggg aggatttcac
     1921 agatattcga cggattcacg gtggcttgta cctcactttg agaagatgct atacgacaat
     1981 gccctgttgc caacagttta cgcagaagca taccaaatta caaaagatcc aaaatatctc
     2041 gagatagtaa atcaaacatt atcatttgta ctaagagaga tgacatctga tgaaggcggt
     2101 ttctattctg cacaagatgc cgattccgaa ggtgaagagg gcaagtatta tgtgtggagc
     2161 aaaggtgaaa tagaacaatt attgggaaaa gatgctgaac tcttctgcct atactatgat
     2221 gtaatccaag gtggaaactt tgaaggtaag aatattttac ataataacat caatcagtct
     2281 tctgtaagtt ttcaatttgg caagtcagaa ttagaaacaa tggaaatcat tcgtcattgc
     2341 aaagaaaaac tctatgaaac aagaataaaa cgcattcatc ctggcaaaga tgataaaatt
     2401 ttgactagct ggaacgcgtt gatgataact ggatttctaa aaggatacag agtaacacag
     2461 catgatgaat ttctaaaagc agcaacaaga tgtatagatt tcattgaaca aaagattaca
     2521 aaaaatggca cactattaca cacatacaaa aatggcgaag caaaactcaa tgcatatctt
     2581 gacgactatg catacttcat aaatgcatta ttggattatt ttgaaataat gcctacaaaa
     2641 aaatatctag acctggcagt acattacgca aattatatac tccaacattt ctgggatgaa
     2701 aatgaaaaaa atttcttctt tacagcagac aatcatgaga agttaataat cagaactaaa
     2761 aacatttacg atctttcatt gccttcggga aattctgttg cagcaagtgt catgttaagg
     2821 ctttatcata taactcaaga taaaagattc ttggaaacat ctctgaaggt aatggaatct
     2881 cttgctacca tgtctgcgga aaacccattt ggttttgggc aattattaaa tgtgatttac
     2941 atgtttttac aaaaaccaat tgaaattaca gttattaaca aaatgaatcc cgaaatatac
     3001 gaatatctga caaaaaaatt ccttcctgag gcaatacttg taactgtttc agaccacgat
     3061 gacctggcga cacttagaca tttaccgttc tttgctggca aggattacga tgtgagaaaa
     3121 actaaagtgt acatatgtag ggatttcaca tgttctttac cattgggaac aacgaaagaa
     3181 atcgagcgtc ttctttagga ctttttgata ttaatttcta gtttctgccc aacttgaggg
     3241 ctacccattc gctcatatct tcgctttggc attgttataa taattgaagt ctgtgcataa
     3301 cttttgatag atattgtagg ttgagcttgc aaaattgcct caaggaaagg taaaatctgt
     3361 tctcttaatt caggttctaa tttcttgttg atggcctcaa gcattaattg tttttgtgat
     3421 attggttcag tctgcacatc ctctgcaaga gttaactgta cagtttgccc attatctact
     3481 agctgttgta tttgatactg gacaagttct gacatgaaca ttctttgaaa tcattgaaat
     3541 ttaatcgttc gtaagtttac aaaatcacaa attaataata tgtctatttt tctgcatcca
     3601 atatacttct tttaatctga gcagctttac gtttgattat ttgtgtaaat tcttgtatgt
     3661 cttcaagggg gggcttttgt ttttgattat cgtatgtttg taggaatgca gaataaatgg
     3721 aacccacgat cagtccaaaa gttgcagctg gtatgtctcc cacctcgtct gcatatatcg
     3781 ttgccatttg tctatacgaa gcggcctcac tgatataata atccgccaaa ttgtcgataa
     3841 aacttctagt tgttgctgga atcacaattt cacttgagcc ttattattta taatgtttaa
     3901 ttttaaagaa attcttaaga caatttaaca gtaaatggta atggccattt ctataattga
     3961 gaatggtcgt taggcaatta aataccaaat cctataccat agacgatgaa aaattccaca
     4021 cggcgattca ttctgattgc aactatgctt gtactgttaa atagtggaat ctattttgtt
     4081 actgcatatt cacaaatgag ggagtcaaat gatgtggcaa gccagatgca aaccatgtta
     4141 tttacaaccg cggcaataac atatctgccc ttaggtatat ggatggtcaa aaatgggctt
     4201 cacagtaaag caccatatat tatagcaatc ttgatctcaa tagcattaat tgggctttac
     4261 attgcttcaa ggactattgc gcttccgata gttggaatcc aaggtgatgt aggtcttata
     4321 gatgtc
//
LOCUS       DASPUS010000164         2604 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_922155, whole genome shotgun sequence.
ACCESSION   DASPUS010000164 DASPUS010000000
VERSION     DASPUS010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2604)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2604)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2604
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_922155"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..460
                     /locus_tag="VEJ68_03830"
     CDS             <1..460
                     /locus_tag="VEJ68_03830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05932.1"
                     /translation="LLVMNESSIVKVMGMWKKHKSSVAIAFVNNSISPDAFTSVCSRF
                     ARNLEDSPYGEAYRSMNKGYRRLSEIAWHVCYEEDAFDLIGQAYGSVETFFELLEEQR
                     VALEAYAHSYMDTRRYIEGIVLLLVAKKAIGWGKRFKDEYRNLDVRIKYR"
     gene            663..1427
                     /locus_tag="VEJ68_03835"
     CDS             663..1427
                     /locus_tag="VEJ68_03835"
                     /inference="COORDINATES: protein motif:HMM:NF017944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CbiX/SirB N-terminal domain-containing protein"
                     /protein_id="HXX05933.1"
                     /translation="MKKALLIIDRGSRELEVREELERICSIAKTKGGYYYTNYCFLEV
                     IPPFIEEGIRKCQENGVDVITVMPYFLYPGMKLKDSVRKSARISKILKLNLVIAKPLS
                     YHHKMTELVIDRINCLKKEKGIQYSDLECDILLMGHGSSDKNARIAFEYTRNSLRPFY
                     RKVEFCFLELDNPNIQQGIKMMFENDPKLLILMPYFLHKGAHMKRDVINEVNEALKKY
                     RFKNVFIANHLGVDQKLVDLLIERARDVEKKRFGFS"
     gene            1745..2389
                     /locus_tag="VEJ68_03840"
     CDS             1745..2389
                     /locus_tag="VEJ68_03840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4443 domain-containing protein"
                     /protein_id="HXX05934.1"
                     /translation="MHAHVKTLQEISGRYAPSRILSFDIAHVYKALQLIETRGHISRD
                     LLCKELNLGEGSIKTLVKHLMMQNMIETSNAGTKMSDKGKKFFAELHSSIPAECRIPK
                     CSIAFGKFNHAILLKKLNSPIKLGIEQRDAVIKAGGIGATTLLFKKGKFMMPSTNIDS
                     LRKEPKIHKLLIEELNPKDGDVVIIASSDEDGRIAELSAKSGALLTVMNHNRHN"
BASE COUNT          938 a          404 c          530 g          732 t
ORIGIN      
        1 tctactggtg atgaatgaat ctagtattgt aaaagtaatg ggaatgtgga agaagcataa
       61 atccagtgta gcgatagcgt ttgttaataa ttccatttcc ccagatgcgt ttacgtccgt
      121 gtgctcgcgc tttgcacgca atttagaaga tagtccttat ggtgaagcat acaggtcgat
      181 gaataaaggt tatagacggc tatctgaaat agcatggcat gtctgttatg aagaagatgc
      241 ttttgatcta ataggtcaag cttatggttc agtagaaaca ttttttgaat tattagaaga
      301 gcagcgcgtt gcgcttgaag catacgcaca ttcatacatg gacacgagga ggtatataga
      361 aggtatcgtt ctactacttg ttgctaaaaa agcgatagga tggggtaaaa ggttcaaaga
      421 cgaatacaga aacctagatg tcagaatcaa gtataggtga attctaaatt gattgatcat
      481 gggattagca gtacaatgaa aagagtaccc tctatgcaat agagaagcag gtgtaaaatg
      541 cttacaaatt tttcttcgga attcgtacat ttacagcaga agcagcatac caaatccatc
      601 caagaaggta caattaaagg caaccgtaac gtgtcaggaa gctgcactta acttttagca
      661 aattgaaaaa agccttactg attatcgata gggggagtcg ggagctcgaa gtaagagaag
      721 agcttgagag aatatgctcg attgccaaaa ccaaaggagg atactattac acaaattatt
      781 gctttttgga agtaattcct ccattcattg aggaaggaat cagaaaatgt caagaaaacg
      841 gagtagatgt cataacggtg atgccatatt ttctctatcc tggaatgaag ttaaaggatt
      901 cggtcagaaa gagcgctaga atctccaaga tcctaaaact gaacttggtt attgcaaaac
      961 ctctaagtta ccaccataag atgacagaat tggtaataga tagaatcaac tgcttaaaaa
     1021 aagagaaggg tattcaatat tcagatcttg aatgtgatat tcttcttatg ggtcacggta
     1081 gtagtgataa gaatgccaga attgcttttg aatataccag gaattcctta agaccttttt
     1141 atcgcaaagt agaattttgt ttccttgaat tagacaatcc taatatacaa caagggataa
     1201 aaatgatgtt cgaaaatgac ccaaaacttc tcatattgat gccctacttt cttcataaag
     1261 gagcacatat gaaacgggac gtaatcaatg aggtaaatga agcactaaaa aaatatcggt
     1321 tcaaaaacgt ctttatcgca aatcatttgg gggttgacca gaagctagtt gatcttctta
     1381 tcgaacgtgc aagagacgtc gagaaaaaaa gatttggatt cagctgacct gggaccagat
     1441 ctgtcttgaa tagttggatg tctgaaagaa accacataga aaaaatcttg atgccgacgc
     1501 agtagagggg ttatgatcaa atcgaattag tatcgtaacg agggtaatct ttattgacgc
     1561 ttgttcatta ttgttggctg aactatccga tacaaaaaaa gccaagaaat aataatatga
     1621 cctcatagat ataatcagtc ttattaatcc caaagataga caaaatatgc agatggtcat
     1681 acatctcaac cacaaattca aatgaattaa taagaaggta ggtacacagg taagtataca
     1741 gaacatgcat gcacatgtta aaacgcttca agagatttca ggtaggtatg ctccaagtag
     1801 aatactttct tttgatatag cacatgttta caaagcacta caacttatcg aaactagagg
     1861 acacataagt agagatttac tgtgtaaaga actaaatctt ggagagggtt caatcaaaac
     1921 cttagtaaag catttgatga tgcaaaatat gatagagacc agcaatgctg ggactaaaat
     1981 gtcagataaa ggtaagaagt tttttgctga gttacattcc tctattcctg cagaatgtag
     2041 gattccgaaa tgttctattg cattcgggaa atttaatcat gcaattctat taaagaagct
     2101 caattcaccc ataaagttag gtatagagca aagagatgct gtaataaaag cgggaggaat
     2161 aggggctacc actctattgt tcaaaaaagg aaaatttatg atgccttcta ctaatataga
     2221 ttctctaagg aaagaaccca agatacataa attattgatc gaagaattaa atcctaaaga
     2281 tggcgatgtg gtgataatag caagtagcga tgaagatgga cgaattgcag aacttagtgc
     2341 aaagagtgga gcacttttaa ctgtaatgaa ccataataga cataattagg tggcatttat
     2401 accgtggtct taatttccac agtgtcttta tattatatgg atattttaac ataaatttta
     2461 ttctataatt acttggataa acagtccaat aatttaaata gtacgtaaga acaaaacaga
     2521 cgattgagaa cagtcagtaa atgatttgta caagtatgag ccatcacatt ttccttggta
     2581 caaatgtaat tttaaactct tcat
//
LOCUS       DASPUS010000165         3054 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1734676, whole genome shotgun sequence.
ACCESSION   DASPUS010000165 DASPUS010000000
VERSION     DASPUS010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3054)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3054
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1734676"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1527
                     /locus_tag="VEJ68_03845"
     CDS             <1..1527
                     /locus_tag="VEJ68_03845"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HXX05935.1"
                     /translation="WGRKPLASMKLAATSFWIMEGAIILLFLDTVLHFGAGWYNLMPL
                     TFLPGFPVITWDLTAAITFQIADVLVGIAITIFCIVILATLLRGKLPVGTQIFEYMHE
                     KDEGDQKYHEHPLVRANRDVREIQSRESSENEKSSEEKITDKQIKIADQEFTHREDLP
                     ASIRWVSLIGINAWFPKKWRDATPAVPIVLVSAFVTAMVQIIANPGLFVQLSIGFESI
                     KNPIASSNWLLTKDAWWFFGHPIVYFPLFIFLGAIYFLAPRYGKERVPFFKWNYRTWP
                     FYLAFSTLVFSHHVFMDIPNPVWLQMVSQTASLAIVWPSAMTIITILLFTWRSKISWN
                     ITARFFIAGIAGWMFGGFQGAEMGMWGTDVYLHNTMVMPSHIHLSLLLGPLLMAFGII
                     YAIFPDLTKKHLSKTLGEIHFWLTIFGGFGLAILFDIIGMQGAIRREADMPIVFHWAM
                     APLLFFALVIGITQFLFVYNFVKTLHRNYTKRELVEYDELHKNPDGLGINLETNLDGG
                     "
     gene            complement(1573..2133)
                     /locus_tag="VEJ68_03850"
     CDS             complement(1573..2133)
                     /locus_tag="VEJ68_03850"
                     /inference="COORDINATES: protein motif:HMM:NF017758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF892 family protein"
                     /protein_id="HXX05936.1"
                     /translation="MNTKVSTRSNSKMAEYLNEQLAVENAVVDRLVTRIHETPISDLK
                     QHLEKNLRQTMNRQERMYQVINGLGVKPTDTKANLPSLKMSHRDNIKVLKDKVESLTI
                     HDKDDAKSAENEIHKIKEDLIIEKSGVISYKILLRLAEQANIQDAIDTLKQNLEEEQS
                     MSDWITDNASAMIDELWPKIESSLIE"
     gene            2875..>3054
                     /locus_tag="VEJ68_03855"
     CDS             2875..>3054
                     /locus_tag="VEJ68_03855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05937.1"
                     /translation="MINAPTQLKFAAVNLLTGSHLKNLLAMVVITTNSSGHGKIFKFS
                     NIIVPDGNFTLECFTN"
BASE COUNT          888 a          568 c          570 g         1028 t
ORIGIN      
        1 tgggggagaa aaccgttggc cagcatgaaa ctagcggcga catccttctg gattatggaa
       61 ggagctataa tacttttgtt cttagataca gtccttcatt ttggtgctgg gtggtacaac
      121 cttatgccct taactttcct acctggattt ccagtaataa catgggatct gactgcggct
      181 attacatttc agatagcaga tgttcttgta ggtatagcta ttacgatctt ttgtatcgta
      241 atacttgcta ccttgcttag aggaaaatta cccgtgggaa cccagatatt cgaatacatg
      301 catgaaaaag atgaaggaga ccaaaaatac cacgaacatc ccttagtgag ggcaaacaga
      361 gacgttcggg aaattcagag tagagaaagc agtgaaaatg aaaagtcttc cgaagagaag
      421 ataacagata agcaaatcaa gattgcagat caggaattta cacacaggga agatttaccg
      481 gcaagcatca gatgggtatc attaatagga atcaatgcgt ggttcccaaa aaaatggaga
      541 gatgcaactc ctgctgtgcc gatagtatta gtatctgcct ttgtaactgc catggtacag
      601 ataattgcaa atcccggtct atttgtacaa ttatctattg gctttgaatc tataaagaac
      661 ccgattgcat cgtcaaactg gttattaacc aaagatgcat ggtggttctt tgggcatcca
      721 atagtttatt ttcccttatt catattttta ggtgcaatat actttttagc ccccagatat
      781 ggaaaggaac gtgttccatt ttttaaatgg aattacagga cctggccgtt ctatcttgct
      841 ttctctacac tcgtcttttc tcatcatgta tttatggata ttcctaaccc tgtttggctt
      901 caaatggtat cccaaaccgc atctttggct attgtttggc cctctgctat gacaatcata
      961 acaatattgt tgttcacttg gcgttcaaaa atatcgtgga atattacagc acgtttcttt
     1021 attgcaggga tagcaggatg gatgttcgga ggatttcaag gagcagagat gggtatgtgg
     1081 gggactgatg tgtatcttca caataccatg gtcatgccat cacacataca cctatcactt
     1141 ctgttaggtc ctttgttaat ggcttttggc ataatctacg ctatatttcc agatcttaca
     1201 aagaaacatt tgagtaaaac ccttggtgaa attcactttt ggcttacaat ttttggcgga
     1261 ttcggtttgg ccatattatt tgacattatt ggtatgcagg gagcgatccg tagggaagca
     1321 gatatgccga tcgtatttca ttgggcaatg gctcctcttt tgttctttgc acttgtgata
     1381 ggcataactc aattcctgtt tgtttacaat tttgtcaaga ccctacatag aaattataca
     1441 aaaagagagt tggtggaata cgatgaattg cataagaatc ctgacggatt gggcatcaac
     1501 cttgaaacga accttgatgg tggttaagaa ttaaaactgg atgggtgaaa tgtatcgttg
     1561 tttatgattt gcctattcaa ttaatgatga ttctattttt ggccataact cgtcaatcat
     1621 agctgaagca ttgtctgtga tccaatcaga catagattgc tcttcctcta ggttttgctt
     1681 gagtgtatct atcgcatctt gaatatttgc ttgctcagca agtcgcagta gtattttgta
     1741 cgaaataact ccagattttt ctataatgag atcttctttg attttatgga tttcattctc
     1801 tgctgatttt gcatcatctt tatcatgaat cgtcaatgat tctaccttat ctttcaatac
     1861 ttttatgtta tctctatgtg acatctttag acttggtagg ttggcctttg tgtcagtagg
     1921 ttttacgccc aagccattaa ttacttgata cattctttcc tggcgattca tggtttgtct
     1981 caggtttttc tctagatgct gcttcagatc agatatcggt gtttcgtgaa tcctggtcac
     2041 taatctatct actactgcat tttccactgc cagttgttca ttaagatact ctgccatctt
     2101 cgaattagaa cgggtgctaa cctttgtatt cattctgatt ctttgaatga aaacaaatgc
     2161 tttaaccgtt taccagcaga agtcgactaa atagcaacat ctcaattcca aaacccattt
     2221 tgggcaaaaa ttgaacgttc taatcggctt agtaggtcac tagtcttgat gtaatatgtt
     2281 ctccaaatag tcgctcatcc tatttttgtc atatcaggcc gactaattcg tgtagagcca
     2341 ttaatagaat tgcaactata atcacgccca gtactatcca tatgtatttc caaatcataa
     2401 taaattcaat aaatattatg gtataaataa tataataacg atatcattag gcgtaccttg
     2461 gaagactaaa tggcatatgg aatttagtca ccttcatttt gattctaatt ctgttttctt
     2521 aaccttaaga gtgctcaaat cccttcctat acagtataat tctcatcaag tattcgtaga
     2581 gaaatgatat ctcatgacta ttattacatt gatgatctaa cctccagaag cttttacatt
     2641 agatcacaat tcatatagtt gaaaaaaatc aaactgatag ttgatgaaaa atccaaactt
     2701 ggtagctatc caggctgcct tttccttcat attcttactt gtgctaatag tgacaattaa
     2761 taatgtcaca tttgaatggt cggcattagc tcaatcttct ggaaatgaaa cacaagtttg
     2821 gatagacaga gaaaataatg tgaaaatttt tttacttatt caccagagaa tcctgtgata
     2881 aatgccccga ctcagctcaa gtttgctgca gttaacctac taacaggttc tcatttgaag
     2941 aatttgttag cgatggttgt cataaccact aatagcagtg gacatgggaa aattttcaaa
     3001 ttttcaaaca taatcgttcc tgatggtaat tttactttag aatgtttcac taac
//
LOCUS       DASPUS010000166         4269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_361200, whole genome shotgun sequence.
ACCESSION   DASPUS010000166 DASPUS010000000
VERSION     DASPUS010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4269)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4269
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361200"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..759
                     /locus_tag="VEJ68_03860"
     CDS             <1..759
                     /locus_tag="VEJ68_03860"
                     /inference="COORDINATES: protein motif:HMM:NF016101.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HXX05938.1"
                     /translation="PRTATDGALQTAYSAHHEPFEYYNSTSNPHHLPPASNAEIGNNG
                     QANHQYDLNLFYTAINNGNLPQVTFLKAVKARDGHAGYSDSLDEQVFLANVTNTIANS
                     PYWPNTAVVIAYDDSDGWYDHVAPTIKNNSNDPLNDYGPECGGKNAGLGGANDRCGPG
                     PRLPLVVISAYAKQNYISHVQTDQSSIIKFVLQNWNLGGIPTTLGQQSFVNIAGSIND
                     MFDFTNHGNTPKICLNAAGQVVPPVSGKCTAVNS"
     gene            812..1597
                     /locus_tag="VEJ68_03865"
     CDS             812..1597
                     /locus_tag="VEJ68_03865"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HXX05939.1"
                     /translation="MQDIFSLIILGVLGLVIGFIGGLVGLVLGVIRFPLILGTELSAS
                     ITAGTNIGVSTLGAFTAAIRHYRQHNIHLRIFVIMASTGAVGGFLGAMVTKFVPVNLL
                     LLVIGLIVSYEAYVLISNSRKKIENKIQNTKRNSIFIESCIGFGIGFLGGVVGLVLGS
                     IRMPAMISVLKMEPKVAVGTNLAAATIMGTSALVGHLINKEVDFLTLAVMGSTAMIGG
                     YIGAKYTGKFRPERLKLLLGFVLIVVAIFMFTSIFLHTRGSSF"
     gene            1620..1997
                     /locus_tag="VEJ68_03870"
     CDS             1620..1997
                     /locus_tag="VEJ68_03870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05940.1"
                     /translation="MYSDTKSIKLDKLCKSIIDSNENIRSVEIIGKFGTTLEKLGDME
                     NTLKLNDTYNECLLDIALGKEFGEFYGPIRYHFSKNKSVMFSFPFDENFVFVTTTKNI
                     SPIWLATKIARIINKYTSVFKNL"
     gene            complement(2220..2510)
                     /locus_tag="VEJ68_03875"
     CDS             complement(2220..2510)
                     /locus_tag="VEJ68_03875"
                     /inference="COORDINATES: protein motif:HMM:NF013224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HXX05941.1"
                     /translation="MEEFNECIYPHEMATAHLAIKCRSGLENRITEDLQEIEGVTSVH
                     RTAGEFDILVKVEAIDYESLRKIIRWKIFTSDYIESITTLMCMRKSMCVVVE"
     gene            complement(2625..3023)
                     /locus_tag="VEJ68_03880"
     CDS             complement(2625..3023)
                     /locus_tag="VEJ68_03880"
                     /inference="COORDINATES: protein motif:HMM:NF042555.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6659 family protein"
                     /protein_id="HXX05942.1"
                     /translation="MTSEALVRRPQLELICKQISHIDDHVDLVAILNHKGRVEDMIAR
                     DDGINRDLTAHKREMLFMESVLHASMYSEYDDEFGRVKVSVIQREKVLVFSFQIDNYY
                     LLVISKPVLNPAALQQKIASVIFNYTTIAN"
     gene            3485..3982
                     /locus_tag="VEJ68_03885"
     CDS             3485..3982
                     /locus_tag="VEJ68_03885"
                     /EC_number="2.7.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010189596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide-nucleotide adenylyltransferase"
                     /protein_id="HXX05943.1"
                     /translation="MNGLLIGRFQPFHKGHLSAVSFGLSKVENLWIGIGSSNKSHEKR
                     NPFTADERKEMILSSLDSESLKRIKIFFVPDIGDHEKWTWHVDSIVPKYDVVFSNDDF
                     TLSLYKKRGVNVIEVPLLQRDTISGTKIRELMIKDGDWSSLVPEGTKKVLLQTNVKER
                     LSKIL"
     gene            4025..>4269
                     /locus_tag="VEJ68_03890"
     CDS             4025..>4269
                     /locus_tag="VEJ68_03890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008298563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HXX05944.1"
                     /translation="MEYLVMLPGPTNVPERVTRAMFTHMINHRSKDFVKLYVDTIEKS
                     QKIFDTTSDVVALSASGTGAVEASVVNMIKKGDKVIIP"
BASE COUNT         1388 a          740 c          794 g         1347 t
ORIGIN      
        1 ccaagaacag caactgatgg agctttgcaa actgcctata gtgcacacca cgaaccattc
       61 gaatactata actccacatc caatcctcat cacctgcctc cagcatctaa cgcggaaata
      121 ggaaacaacg gacaagcaaa tcaccaatat gacctcaatc tcttctacac tgcaataaat
      181 aatggaaact tgccacaagt aactttcctt aaagcagtca aggcaagaga tggtcatgca
      241 ggatattcag actcgcttga cgaacaagta ttccttgcta atgttaccaa tacaattgca
      301 aacagtccct attggccaaa cacagccgtg gtcatcgcat atgatgactc tgatggctgg
      361 tacgaccatg ttgcaccaac catcaaaaac aattcaaacg atccactcaa tgactatggt
      421 ccagagtgtg gtggtaagaa tgcaggttta ggtggtgcaa atgacagatg tggtcctggt
      481 ccaagactgc cattagtggt gatatccgca tacgcaaaac aaaactacat ttcacatgtt
      541 caaacagacc agtcctccat tatcaaattc gtattgcaga actggaatct aggtggaatt
      601 cctacaacac taggacagca gtcatttgtt aacattgcag gttctataaa tgacatgttt
      661 gatttcacca atcatggaaa cactccaaag atatgtttga atgcagcagg tcaagtagtt
      721 ccaccagtaa gtggtaagtg tacagcagta aactcttaaa cactccccct ctctttattt
      781 ttaaattaaa gtatcatagt agggtttatg cttgcaagat attttttcgc taataatttt
      841 aggggttctt ggtcttgtaa taggttttat tggaggtctt gtggggctag ttttaggtgt
      901 tattcggttt cctcttattt taggaacaga actttctgca agcattactg cgggaacaaa
      961 tattggagta agtactttgg gagcctttac agctgcaata agacactata gacaacataa
     1021 catacatctc cgaatctttg ttataatggc atcaactgga gcagtagggg gatttcttgg
     1081 agccatggtt acaaaatttg ttccagtaaa cctgttgctt ttagtaattg ggttaattgt
     1141 ttcatacgag gcatatgttc taatctctaa ttcaagaaaa aaaattgaaa ataaaataca
     1201 aaacacaaaa agaaattcca tattcattga atcgtgtatt ggctttggaa ttggatttct
     1261 tggaggcgta gttggcttgg ttttgggaag tattcgtatg cctgcaatga tctcagttct
     1321 aaagatggaa ccaaaagtag cagtgggaac aaatcttgct gctgctacta taatgggtac
     1381 atcagcccta gttggtcatc tgataaacaa ggaggtagat tttcttacat tggctgtaat
     1441 gggatcaact gcaatgatag gaggatatat tggagcaaaa tatacaggaa aattcaggcc
     1501 agaaaggcta aaacttctcc ttgggttcgt attgatagta gttgcaatat ttatgttcac
     1561 aagtattttc ttgcatacta gaggatcatc tttttagagg tctgcatgat acgaaaattg
     1621 tgtattctga tacaaaatct ataaaactag acaaactctg caagtcaatt atagattcaa
     1681 atgaaaacat tcgttctgta gaaataatcg gaaaattcgg tactacactt gaaaagctcg
     1741 gtgatatgga gaatactttg aaactaaatg atacgtataa tgaatgtctt cttgacatag
     1801 ctcttggaaa agagtttggt gaattttacg gaccaattag atatcacttt tcaaaaaata
     1861 aatctgtaat gtttagcttt ccgtttgatg aaaattttgt ttttgtaaca actacaaaaa
     1921 atattagtcc tatatggtta gcgacaaaaa ttgcccgtat tattaataaa tatacatctg
     1981 ttttcaaaaa cctctagtaa ttttttagat aatatacaac tcaagaaagg aaaattttgt
     2041 tgcaataggc taatacattt acaaaaatct gattctacat ttgtcttatg atcaagcggg
     2101 attgacaaat tttatgtaca aatcacttgt ttcccacttg gctgctggaa ggcccaaaaa
     2161 aggtcgcttg tagtatttgc ttcgagactc attttttgtt gtttgatttg ttttttcttt
     2221 cattctacaa caacacacat agattttctc atgcacatca aggtagtaat tgattcaatg
     2281 taatcactag tgaagatctt ccatcgtatt atttttctta aagattcata gtcaattgct
     2341 tctactttga ctaaaatatc aaactcgcca gcagttctat gtacacttgt aacaccttca
     2401 atttcttgaa gatcctcagt tatcctattc tctagacctg atctacattt tattgccaga
     2461 tgtgcagtag ccatctcatg aggatatata cattcgttga actcttccac aatttttcat
     2521 taaacactat ttgcttgaaa ggattgacct aatgatttct ttagtgctat gaggattcca
     2581 tagtcttcat aaaataagtt ttgtatcttt gttttactat atcattaatt tgctattgtg
     2641 gtatagttga aaattacaga agcaattttt tgttgaagtg ctgccggatt aagcactggt
     2701 tttgatatga caagcagata ataattatcg atttgaaatg aaaatacaag aaccttttct
     2761 ctttgtatca ctgaaacttt gactctacca aattcatcgt catattcgct atacatagat
     2821 gcatgaagca cagattccat gaataacatt tctctcttgt gcgcagtcag atctctattt
     2881 atcccatcat cacgtgctat catgtcctca actcgacctt tgtgatttag gatagcaact
     2941 agatcgacat ggtcatcaat gtgagatatt tgtttacaaa ttagttctaa ttgtggccta
     3001 cgtacaaggg cttcacttgt catactatta gagttgtttt tgctcgtcaa aaggattcac
     3061 cgtatagaac gttgttctct atggcaatta catagctcta tgaagtatac gaaaaaccat
     3121 agtgtatgtt tagataatta tactagtaag acaagttagt ggtctaccat ggtcactttg
     3181 ccttcttcca tttgatcagg tagacttact ccccacctta ctaactgttt tatttggcat
     3241 ttctgtgacc aaagtcgaaa atattggaaa cttgtaagaa atgtggccat tcaaaagatg
     3301 atcatagggg tacagccacg atatgtatga agcaaatcgg agacgaacct gatcgcctct
     3361 gtgattgtaa ctggtttgat gatggcaaag tgcatgtgtt gccaattaga taggatatgt
     3421 gaaattcaga aaattagttt tacataatga tggtttttta aacaagcgag gttagatctc
     3481 gctgatgaac ggtcttctaa ttggaaggtt tcaaccattt cacaaaggac atctctcagc
     3541 tgtaagtttt ggactatcaa aagttgagaa tctctggatt ggaattggca gctcaaacaa
     3601 gagtcacgaa aagaggaatc cctttacggc agatgaaaga aaagaaatga tcttatcttc
     3661 actagattca gagtcactaa agagaatcaa gatcttcttt gttccagata ttggcgatca
     3721 tgaaaaatgg acttggcacg tagattctat agtaccaaag tatgatgtgg tcttttcaaa
     3781 tgatgatttt accttatcac tatacaaaaa gagaggagta aacgtgattg aggtcccact
     3841 tttacaaaga gatacaatct caggcacaaa aattcgtgaa ttgatgataa aagacggaga
     3901 ttggtcaagt cttgttcctg aaggaacaaa gaaggtattg ttacagacaa atgtcaaaga
     3961 acgtttatcg aaaattctgt aattataaat aatggatggt tttcgtaaag aatggagaaa
     4021 tttattggaa tatttagtaa tgctaccagg accaacaaat gtcccagaaa gagtaacacg
     4081 agcaatgttt actcacatga taaatcatag aagtaaagat tttgtaaaat tatacgtaga
     4141 taccattgaa aaaagtcaga agatatttga taccacaagt gatgtagtag ctcttagtgc
     4201 atctggtact ggagcagtcg aagcatctgt tgtaaacatg ataaagaaag gtgacaaggt
     4261 aataattcc
//
LOCUS       DASPUS010000167         3141 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_234595, whole genome shotgun sequence.
ACCESSION   DASPUS010000167 DASPUS010000000
VERSION     DASPUS010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3141)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3141)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3141
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234595"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..286)
                     /locus_tag="VEJ68_03895"
     CDS             complement(<1..286)
                     /locus_tag="VEJ68_03895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-CASP ribonuclease aCPSF1"
                     /protein_id="HXX05945.1"
                     /translation="MQRNKQQREVSQQPNVMGTILQSIPKEAEVTKIEYEGPRIAIYT
                     KNPRFLMDHNDVISNMVNIIKKRIVVRTEESIRKSEEEARQILTQMIPKDA"
     gene            complement(294..926)
                     /gene="psmB"
                     /locus_tag="VEJ68_03900"
     CDS             complement(294..926)
                     /gene="psmB"
                     /locus_tag="VEJ68_03900"
                     /EC_number="3.4.25.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000502 - proteasome complex [Evidence
                     IEA];
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaeal proteasome endopeptidase complex
                     subunit beta"
                     /protein_id="HXX05946.1"
                     /translation="MSDYIEQHTLHGTTTVGIACTDGVVLCADMRASAGYFIANNNTM
                     KIQKIDNHAGMTMAGGVADAQNITDILRYHSNIHRIEKQEYLPIKSIARLASLIFFQN
                     RYYGFIADILVGGYDKQGPSLYNIDPFGSLDKKKYVTTGSGSPVAYGLLESEYRDNLT
                     VDEAKVVALRAVKGAITRNIGTGDGINIAVIDKQGFQLLTREQKKAIITL"
     gene            1012..2073
                     /locus_tag="VEJ68_03905"
     CDS             1012..2073
                     /locus_tag="VEJ68_03905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-1-phosphate dehydrogenase"
                     /protein_id="HXX05947.1"
                     /translation="MRFEEKFMPSHVMELPRQIVVGEKNINSIGGFLIGLSKPRKVSL
                     VSGEQVKRITYNKVVKSLSDSKIKHIWHPSTSNDVESVKKILFDIKKDKSDLIIGIGG
                     GRSVDIAKMIAFTVKKPFVSIPTSASHDGIASPFVSLRGDKPYSIIATAPLGVFVDIE
                     ILKKAPRRLIASGCGDLMAKVTAVRDWELARDKIGEYFGTYAANLASMSAKIVIDNSK
                     NFKKKPDVRMIVEALISSGVAACIAGSSRPCSGAEHLFSHAVDYLESGIGLHGEKCGI
                     GAILIAKLQGQDWKKIIRMLKNVGAPTTAKEICLEPKILAKALTIAQSLRPERYTILS
                     QVKMTEEKAIALAKSTGVL"
     gene            complement(2075..2824)
                     /locus_tag="VEJ68_03910"
     CDS             complement(2075..2824)
                     /locus_tag="VEJ68_03910"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HXX05948.1"
                     /translation="MVFQKGTLILVDYTAKVKDTNEVFETTQEADAKSNSIHDANVKY
                     QPRLVSVGESWVLKGLDDALANANSGDKLSVEVPPEKGFGARDTSKVRMVPLRKLGDD
                     AEKVSVGDTIELDDRTGIIRFIGSGRVQVDFNHRFAGRTILYDVNVIKSLDTDQDKIM
                     GLLKRRFPLEESKLKFEIKGTELDIIIPEEAMMMEGLQVVKRAIANEILKFVTKLDKI
                     NFIEVYNRAKPQEKPVEQKAAEAKPAPPKAA"
     gene            complement(2868..>3141)
                     /locus_tag="VEJ68_03915"
     CDS             complement(2868..>3141)
                     /locus_tag="VEJ68_03915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013482796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HXX05949.1"
                     /translation="ARSTVVIALNYLQGLDDKTFRGTLSEKFRVLVAGGFGELKGKVF
                     RVGCMGEVSKYHVMRTISAIHSTLDMMGYKTNPEALKVAEEKLKAL"
BASE COUNT          868 a          613 c          595 g         1065 t
ORIGIN      
        1 ctgcgtcttt tggaatcatc tgagtcagta tctgtcttgc ttcttcctca cttttcctaa
       61 tcgactcttc tgttcttaca actattctct tttttattat attgaccatg ttcgaaatta
      121 catcgttgtg atccattagg aaacgaggat tttttgtgta aattgcaatt ctaggtccct
      181 catactctat tttagttacc tccgcttctt ttggtatact ttgaagtatg gtccccatga
      241 cattgggttg ctgtgatact tcacgttgtt gcttatttct ttgcattaaa tcactataaa
      301 gtaatgatgg ctttcttttg ttctcgtgtt aaaagttgga atccctgttt gtcgattact
      361 gcaatgttta ttccatctcc tgttccaata tttcttgtta ttgcaccttt gacagctctt
      421 aaggctacta ctttagcttc atctactgta agattatcac gatattcact ttccagcaga
      481 ccataggcta ctggtgaacc actccctgtg gtcacatact ttttcttatc aagagatcca
      541 aaaggatcaa tgttgtataa ggatggacct tgtttgtcat accctcctac aaggatatct
      601 gcaataaacc catagtatcg attttggaag aagataagcg aggcaagtct tgcaatcgat
      661 ttgattggta gatactcttg tttttctatt ctatgaatgt tggagtggta tcggagaatg
      721 tcagtgatgt tctgtgcatc tgcaacacca cctgccattg tcatgcctgc atgattatct
      781 atcttttgaa ttttcattgt attgttattt gctatgaaat agccagcgct agctctcatg
      841 tctgcgcaca aaactacccc atcggtacac gcaattccca cagtagttgt tccatgtagt
      901 gtgtgttgtt caatatagtc tgacaaataa cattctccta actagagata ccttcgttta
      961 ggatttcacc tgtttaaata actttgtatt atgataggat atcgataaat aatgaggttt
     1021 gaagaaaaat tcatgccttc tcatgttatg gagcttccaa ggcagatagt cgttggcgag
     1081 aaaaacatta acagcatagg aggtttccta ataggccttt ctaaaccaag aaaagtttct
     1141 cttgtttctg gagaacaggt aaaaaggatt acttacaata aggtagtcaa gtcactatct
     1201 gattccaaga taaaacacat ctggcatcct agtacaagta acgatgtaga gtctgtaaaa
     1261 aaaatacttt ttgatataaa aaaggacaag agtgatttga taattggaat tggtggcggt
     1321 cgttctgtgg atattgcaaa aatgatagct tttacagtaa agaaaccatt tgttagtatt
     1381 ccaacttcgg catcgcatga cggaattgca agtccatttg tctccttgcg tggtgataaa
     1441 ccgtattcaa taatagctac agctccactc ggggtttttg tagacattga aattttgaaa
     1501 aaagctccga gaagactcat tgctagtggg tgtggtgatt tgatggcaaa agtaaccgct
     1561 gtaagagatt gggaacttgc aagagataag ataggggaat attttggtac ctatgccgca
     1621 aacctcgctt cgatgagcgc caagatagta atcgataatt caaagaattt caagaaaaaa
     1681 cctgatgtta gaatgatagt agaagctttg ataagctcag gtgttgcagc ttgtattgct
     1741 ggaagtagca gaccatgttc tggtgcagaa catctattct ctcacgcagt tgattatctt
     1801 gagtcaggga ttggtcttca tggtgagaaa tgtggaatag gggcaatttt gattgcaaaa
     1861 cttcaaggtc aagattggaa gaagataatc agaatgttga aaaatgttgg tgcacccaca
     1921 actgcaaaag agatttgtct tgaaccaaag attcttgcaa aggccttaac tatagctcaa
     1981 tctttaaggc cggaaagata tacaattcta agccaagtaa aaatgaccga agaaaaggcc
     2041 attgctttgg caaaaagtac cggtgtctta tagtttaagc ggcttttggc ggtgcaggtt
     2101 tagcctcagc ggctttttgc tccactggtt tttcctgcgg ttttgcccta ttgtagacct
     2161 ctataaagtt aattttatca agttttgtca caaactttag gatctcgttg gcaattgctc
     2221 tctttactac ctgaagtcct tccatcatca tagcctcttc tgggataata atatcaagtt
     2281 ccgttccttt tatctcgaat ttcagtttgg attcttcgag tgggaacctt ctcttaagaa
     2341 gccccatgat tttatcctgg tcggtgtcaa gtgatttgat tacgtttaca tcataaagga
     2401 ttgttcttcc tgcaaatctg tgattgaaat ctacttggac tcgcccagag ccaatgaatc
     2461 gtataattcc agttcggtca tcgagctcaa tagtatcccc aacagaaact ttctctgcat
     2521 catcacccaa cttgcgtaga ggaaccattc taaccttgct tgtatctcgc gctccaaatc
     2581 ccttctctgg tggtacctca actgagagct tgtcacctga atttgcattt gcaagtgcat
     2641 catctaatcc tttgagcacc caagactctc ctactgagac aagtcttggt tggtacttga
     2701 catttgcatc atgtatagaa tttgattttg catcagcttc ttgtgtagtt tcaaagactt
     2761 catttgtgtc ttttacttta gcggtgtaat ctactaaaat taaggtacct ttttgaaaga
     2821 ccaacgtcat cgatcctttt tgttccttat attaagttaa catgaaatta aagtgctttt
     2881 agtttctctt cagctacttt tagtgcttca ggatttgtct tgtatcccat catgtcaagt
     2941 gttgaatgta ttgcagaaat tgttctcatg acatgatatt tactaacctc tcccatgcaa
     3001 ccaactctga aaacctttcc tttcaattct ccaaatccac ctgctactaa aactctgaat
     3061 ttttcagaca gtgttcctct gaaagttttg tcatcaagtc cttgtagata gtttaatgca
     3121 attacaacag tagaacgtgc a
//
LOCUS       DASPUS010000168         4110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1461090, whole genome shotgun sequence.
ACCESSION   DASPUS010000168 DASPUS010000000
VERSION     DASPUS010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4110)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4110
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1461090"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1489)
                     /locus_tag="VEJ68_03920"
     CDS             complement(<1..1489)
                     /locus_tag="VEJ68_03920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012216080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HXX05950.1"
                     /translation="MSETISRMPLSILSKNKWPLVFALAALVVTMSGFTAMQDAHAQF
                     GPIGNLANPAKTNEIHCGQPMTPPGNGTFGGSMAPCIDTGDTTFMYAAASFVMIMTPG
                     GVGFLYGGLTRRKHALMVILQNFMVYAIVSVQWVIWGYSIMFGPSADPYGFIGNLDWV
                     GLNNVFTNAPADVYAPTIPHLAYVMFQLMFAAITPALAIAGYADRVKMSAFLIHVVLW
                     TTFIYDFVGHANWSLGSQGTSGGWLFKIGTEDFAGGTVIHITSGFAGLAAAMFLGRRI
                     GYGKAPFEPHSIPLIILGATLLWFGWFGFNPGSAGFAGFLETEAFQNTNLATAVAAIW
                     WMFLSWAHTGKASAIGACNGAVAGLVAITPASGFIGVWASIIVGFACATVCFYCVLIK
                     NRARIDDALDTWGVHGMGGVVGALLTGAFSETRINPYGHNGLFFGNPMQFVINCEGAG
                     FGAAWSFGITYIIWRIQDAIWPGGVRVTPKEEEIGLDLAQVGERAY"
     gene            1664..1825
                     /locus_tag="VEJ68_03925"
     CDS             1664..1825
                     /locus_tag="VEJ68_03925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05951.1"
                     /translation="MSEADISIFLATAVCLGITIAIYFGERSYRYKRIKEGKHAGTYG
                     MSYEGEGHP"
     gene            1894..2394
                     /locus_tag="VEJ68_03930"
     CDS             1894..2394
                     /locus_tag="VEJ68_03930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05952.1"
                     /translation="MRVNLEEEEYIIASLPKIWGIALGLEGFFHKSKEGVLALTNRNV
                     IFVPRFLQLMSKEREKYFGDDKARVTKLANYSEADLDEDISKNSKTWIIPLNSLINAE
                     SVTTRKVDFLRMTFKNEKNKIKKYDFGITKSVINYPQRQPLLYYNLDWTAWVDLLNSY
                     ITDKKI"
     gene            complement(2405..2881)
                     /locus_tag="VEJ68_03935"
     CDS             complement(2405..2881)
                     /locus_tag="VEJ68_03935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05953.1"
                     /translation="MTDTKIDWFDDFLGLGYHMYDVRPTIFLIFDGRKKIANTWNKII
                     KYFPDDEIRIRFIEKDLEYELVLYCQSRILSTTWVFSKSLKVSEHYKQFREDYEGAAN
                     LKLALYIPKKDTYELEIFKHLKRITDVKFLTESAIEQDFILERSIQHLRRLPQDKL"
     gene            2991..3215
                     /locus_tag="VEJ68_03940"
     CDS             2991..3215
                     /locus_tag="VEJ68_03940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05954.1"
                     /translation="MKSDKKRISEILRMSERELLEYLRETDNSILVTDSIQIMSFEHG
                     IKAIYHHKDSPKPYKTRVFLKDVENSDSMK"
     gene            3258..3992
                     /locus_tag="VEJ68_03945"
     CDS             3258..3992
                     /locus_tag="VEJ68_03945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05955.1"
                     /translation="MADGHFAEDRWAFIGNIQDWFQRKSQFWLVLSILTFSSILILQI
                     IFNFASQTNLAAKQQSEFLIIPILALFIFSIFWRNIFCTFLSFTGSMLTYGGMFLFHT
                     VNMTTQLTTPIIANRLGYGIKHIVTISPDSVADRYFIVGAFALAFCLAIAIKPNFFKP
                     KDVQELPYPIWKHRRDLELTRNSNATKLVPVSSLMTFAEQHLVAKYKFITVIIGGKKF
                     LVSLYEWVPEDSTVVRDTESGSIIGI"
BASE COUNT         1338 a          789 c          725 g         1258 t
ORIGIN      
        1 tgtatgctcg ttctccgact tgtgccaagt ctaggccaat ttcttcttcc ttgggtgtta
       61 ctcgtacacc accaggccat atcgcatctt gtattctcca tattatgtag gtaataccaa
      121 atgaccatgc agcaccaaag cctgctcctt cacagttaat tacaaactgc atcgggtttc
      181 caaagaacag accgttgtga ccgtatggat taatgcgtgt ttcactgaat gcacctgtta
      241 acagtgcacc aactacacca cccattccgt gtacacccca tgtatccaat gcatcatcta
      301 ttcttgctct gttcttaatt agaacacagt agaaacagac agttgcacag gcaaagccta
      361 caattatcga tgcccaaact ccaataaatc ctgatgctgg cgtaattgct acaagtcctg
      421 ctaccgcacc attacatgca cctatcgcac ttgcctttcc ggtgtgcgcc caactaagaa
      481 acatccacca tattgctgca actgcagtcg caaggtttgt gttttggaat gcttctgttt
      541 ccaagaaacc tgcaaagcct gcacttcctg gattgaaacc gaaccaacca aaccagagca
      601 atgtagctcc tagtatgatt aatggtattg aatgaggttc aaatggagct tttccataac
      661 caattcttct tccaaggaac attgctgcag cgagtccagc aaaacctgat gtgatgtgaa
      721 tgactgtacc tcccgcaaag tcttcggttc ctatcttgaa gagccatcct ccagatgtgc
      781 cttgacttcc aagtgaccag tttgcatgtc ccacaaagtc atagatgaat gtagtccata
      841 gaactacatg tatcaaaaat gcactcatct ttactctatc agcatatcct gcaatagcta
      901 atgcaggggt gatagcagcg aacatgagct ggaacatgac atatgccaag tgtggaattg
      961 taggtgcata aacgtcagct ggtgcatttg taaagacgtt attgagtcca acccaatcca
     1021 gatttccgat gaaaccatat ggatcagcag atggaccaaa cattatagag tagccccaaa
     1081 tgacccactg aacactaacg atcgcgtaaa ccatgaaatt ctgtaagatt accatgagtg
     1141 catgttttct tcttgttaaa ccaccataca agaaaccgac accacccgga gtcatgatca
     1201 tgacgaacga agctgctgcg tacatgaacg tagtgtcacc agtatcaatg catggagcca
     1261 tactaccacc aaaggttccg ttacctggtg gtgtcatggg ttgaccacag tgaatttcat
     1321 ttgtcttggc cggattggca agattaccaa ttggaccaaa ctgcgcgtga gcgtcttgca
     1381 ttgcagtgaa tcctgacatt gtaacaacta aagctgccag ggcaaaaacg agcggccatt
     1441 tattcttaga tagaatactc aatggcattc tcgagattgt ttccgacatc ttttcgtaga
     1501 gatgatatcc gtctataaaa ggtattttat cttaaaatca ttgttttatg atattatata
     1561 gatcaggaac aaatctagat caagttttat ttagaataag gtatcataga atttcaaaaa
     1621 aaattaaaaa aaattattat acaagctccc ggctaattct ttcatgtcag aagcagacat
     1681 tagtatattc ctggcgactg cagtatgtct tggaatcacc attgcaatct actttggtga
     1741 aagatcatac aggtacaaga gaattaaaga aggcaagcac gctggaactt atggaatgtc
     1801 atatgaaggc gaaggccatc cataaaatcc acacgctatt tttaatccac atatcaagat
     1861 agattgattt actattaaga agatgtattt caaatgagag ttaatttaga agaagaggaa
     1921 tacatcatag cctcacttcc caagatttgg ggaattgcac ttggattgga aggctttttc
     1981 cacaagagta aggagggggt tcttgcgttg acaaacagga atgtgatttt cgtaccaaga
     2041 tttttgcaac tcatgtctaa agaaagggaa aagtactttg gagatgataa ggcacgggta
     2101 acaaaactcg caaattattc tgaggcagat cttgatgaag acatatctaa aaattccaaa
     2161 acctggataa ttccattaaa ttctctgata aatgcagaaa gtgttactac aagaaaggtt
     2221 gattttctta gaatgacctt caagaatgaa aaaaataaga tcaaaaagta cgattttggc
     2281 attacaaaga gtgtaataaa ttacccacaa cgacaaccac tactgtatta taatttggat
     2341 tggacagcgt gggtagattt gttgaactcg tacataaccg ataagaaaat ctaattttct
     2401 ggttttataa tttatcttga ggtaggcgac ggagatgctg aattgatcgt tccaatatga
     2461 aatcttgttc tattgctgat tctgttagga atttaacatc cgttattctt ttcagatgct
     2521 tgaatatctc aagttcatat gtatcttttt ttggaatgta cagcgccagt tttagatttg
     2581 ctgccccctc gtaatcctct ctgaattgtt tataatgttc agaaactttt aacgattttg
     2641 agaaaaccca agtagtagac aatatgcgtg attgacaata aagaactaat tcatattcaa
     2701 gatctttttc gataaatcta attcttattt catcatcagg aaaatatttt attattttgt
     2761 tccaagtatt agcaattttt tttcttccat caaaaattag aaaaatggta ggtcgaacgt
     2821 catacatatg ataaccaagg cctaagaaat catcaaacca atcaattttc gtatctgtca
     2881 tctagagcgt ttcaatcatg taacatattt atcattaagc ctaagatgat tattttcaat
     2941 cctccatctc aaaagatatg ttatatacta gcattgaatt tttttacatg atgaaatcag
     3001 ataaaaaaag aatatcggaa attcttagaa tgtctgaaag agaattactt gaatatctaa
     3061 gagagacaga taattccatc ttagtaacag actcgattca aataatgagt tttgaacatg
     3121 gcatcaaagc aatttatcac cacaaggatt caccaaagcc ctacaagact cgtgtctttc
     3181 taaaagatgt cgaaaattca gattcaatga aatagtttac agaatcatat aatttctaca
     3241 tcgtgtaata taccatattg gcagatggac attttgctga agatagatgg gcgtttattg
     3301 gaaacattca agattggttt caacgtaaaa gtcaattctg gcttgtccta agcattttga
     3361 cattttcttc aattttaatt ttacaaatta tatttaattt tgcttcacaa acaaatcttg
     3421 cagcaaagca acagtcagaa tttcttataa tacctattct cgcacttttt atatttagta
     3481 ttttttggag aaacatcttt tgtacatttc tttcatttac tggttcaatg ctgacatatg
     3541 gtggtatgtt cttatttcac actgtaaaca tgacaactca attaacgaca cccatcatag
     3601 caaaccgatt aggatatggt ataaaacaca ttgtgactat ttctccagat tctgttgctg
     3661 acagatattt tattgtgggt gcatttgcat tggctttttg tcttgcaatt gccattaaac
     3721 caaatttttt taaaccaaaa gatgtacaag aacttcccta tccaatatgg aaacaccgta
     3781 gagatttaga attaacgaga aattcaaacg ccaccaaatt agttcctgtt tcatcattga
     3841 tgacttttgc agaacaacac ctagttgcaa agtacaaatt cattacggtg attattggag
     3901 gaaaaaaatt tttagtcagt ctttatgaat gggtaccaga agattcaact gttgtaaggg
     3961 atacagaatc gggatcgata ataggaatat aaaaatagat aaaaaaattg tagttagaag
     4021 acaggctttg atttgagttc acgatattta ccacgagccc agaatccacc ccttattttg
     4081 tcctcagaat tgtaataaca tttttcattg
//
LOCUS       DASPUS010000169         2596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_927545, whole genome shotgun sequence.
ACCESSION   DASPUS010000169 DASPUS010000000
VERSION     DASPUS010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2596)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2596
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_927545"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..249)
                     /locus_tag="VEJ68_03950"
     CDS             complement(<1..249)
                     /locus_tag="VEJ68_03950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HXX05956.1"
                     /translation="MTKFEELGIKNPILTALTEINFQEAFPIQAAAIPILLSGQDVIG
                     QAHTGTGKTAAFSLPIIQNIVPKRGIQALILAPTRELAV"
     gene            475..1200
                     /locus_tag="VEJ68_03955"
     CDS             475..1200
                     /locus_tag="VEJ68_03955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05957.1"
                     /translation="MSSEYRLKKLRGSGGFVMAMITDEQQMKGNLGGPDLFLAPMGRL
                     DSEKISKYYCNTCEKEYEGSPKIDFETPNEIVADNLILLEKGQYICTTCGSVLAEYRN
                     FSKQDEAESIGMAKPDLTSQPMFIPPRDSELQETFTTSVSTSTVKPFSSIAGIAVYDA
                     EARKVGVVKEIGIQPGQSDIILIVTKNDGSDVTVKWDEIRKIGEIVLLGGQIIDNNMK
                     CTKCGNINNQGSKFCETCGNKLK"
     gene            1248..1901
                     /locus_tag="VEJ68_03960"
     CDS             1248..1901
                     /locus_tag="VEJ68_03960"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008297776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HXX05958.1"
                     /translation="MKKRSATSGIVKDIIIVVIGIAIIWIGLRVAFGTENPFYVVSSG
                     SMVPNLNIFDVIVVNGNVSFDQLKIGDIIVFNRPVIHDKVIVHRVAEFLNKNPLIIRT
                     KGDANPGSIPGTDFPISKEDYIGKVVYVIPQIGYVTRILTPPINYVIIAVIVGIMIVK
                     QFGKSKTGTGTSADDGNNLPPSSENPNITSEIKNQIDNEYTKSTSVDDNKDSVDNKQ"
     gene            complement(1905..>2596)
                     /locus_tag="VEJ68_03965"
     CDS             complement(1905..>2596)
                     /locus_tag="VEJ68_03965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase C-terminal
                     domain-containing protein"
                     /protein_id="HXX05959.1"
                     /translation="NGEYEFASMLVERFTCYHRRSYVCKTGLGDVLIGASASIADYNG
                     IPNVSHIRDKLVEMTHLNESIYAAGVASSYQSHRMKSGVWLNDDMLANVCKHNVTRFP
                     YEIGRLAQDIAGGLMVTLPSEKDFRSPETGPILKKYLKGRKGVDVENRLRILRLIENM
                     TMGRNAVGYLTESMHGAGSPQAQRIQIARLMQLEYKKQLAKNLANVKEDGETTPEQSD
                     YFQRVFKTSKK"
BASE COUNT          850 a          451 c          496 g          799 t
ORIGIN      
        1 tacggctaat tctctagttg gtgcaagtat caaggcttgt atgccacgtt ttggaacaat
       61 attctgaata ataggcaatg aaaaagcggc ggttttgcct gttccggtat gtgcttgccc
      121 tatgacatct tgtcctgaca aaagaattgg tattgcagct gcttggatag gaaatgcctc
      181 ttgaaaattg atctcagtta gcgctgttag tattggattc tttatcccta attcttcaaa
      241 ttttgtcaac ttggttcatc atctttttat cgaaattaca gagaagtttt tcggttattc
      301 cgtcattatc tgtatttagc ttgatttgcg ctctgtctct aataactctt tccaaattat
      361 tgaaaaaaac aacgaaaatt tttaaaattg tataatctgt tattcttatt ttatcagaga
      421 tttgacaatc aatttgatat acatacttaa atgacttttc cataggataa ggtcatgagt
      481 agtgaatatc gcttaaagaa actaagaggt tctggaggat ttgtaatggc aatgattaca
      541 gatgaacaac aaatgaaagg aaatttgggc ggaccagatc tctttttagc tcccatgggg
      601 cgtttggatt ctgaaaagat ttcaaaatat tattgcaata cttgcgagaa ggaatacgaa
      661 ggtagtccaa agattgattt tgaaacacca aatgagatag tagctgacaa tctcatactt
      721 ttagaaaaag gacaatacat atgcactact tgtggttctg ttcttgcgga atatagaaat
      781 tttagcaaac aggatgaagc tgagtctatt gggatggcaa agcctgactt gacatcgcaa
      841 ccaatgttta ttccacccag agattctgaa ttacaagaaa cctttacgac ttcagtttca
      901 acatctacag taaaaccatt tagttccata gcaggtattg cagtttatga cgctgaggca
      961 agaaaagttg gagtggtaaa ggagattgga atccaaccag gacaatcaga cataattcta
     1021 atagtaacaa agaatgatgg atcagatgtt acagtaaaat gggacgagat aagaaagata
     1081 ggagagattg tccttttggg aggacagatt atagacaata acatgaagtg caccaagtgt
     1141 ggaaatatta ataatcaagg ctcaaaattc tgtgagactt gtggaaacaa actgaagtaa
     1201 acaatgttaa gcaagattta tcttacgagt taaaaggaca aaaataattg aaaaaacgtt
     1261 cggctacatc agggattgta aaggacatca taattgtggt tattggaatt gcgataatat
     1321 ggattggtct aagagtagca tttggtacag aaaatccatt ttatgtggtg tctagcggaa
     1381 gcatggtacc aaacttgaat atttttgatg tcatagtagt caatggcaac gtttcttttg
     1441 accaactaaa aataggagat atcattgtct tcaatagacc agtgatacac gacaaagtaa
     1501 tagttcatcg agtagcggag tttctaaaca aaaatccatt aattattaga actaaaggcg
     1561 atgccaaccc aggttctata cctggaacag actttcccat atcaaaggaa gactacattg
     1621 gaaaagttgt atatgtcata ccacagatag gttacgttac gaggatccta actccgccga
     1681 ttaattatgt aattattgct gtaatagttg gcatcatgat agtaaaacag tttggaaagt
     1741 caaaaactgg aactggaact agtgctgacg atggaaataa tttacctcca agttcagaaa
     1801 atccaaatat tacaagcgag attaaaaatc agatagataa cgaatatacc aaatctacat
     1861 ccgtagatga taacaaagat tcagtagata acaagcaata gaacttattt tttacttgtt
     1921 ttgaaaactc tttgaaagta atcagattgt tcaggtgttg tttctccgtc ttcctttaca
     1981 tttgccaagt tttttgcaag ttgtttcttg tattcaagtt gcatcagacg tgctatctga
     2041 attcgctggg cctgtggaga accagcaccg tgcattgatt ctgtcaaata gccaaccgca
     2101 tttctgccca tagtcatatt ctctattaga cgtaatattc gcagtctgtt ttcaacatcc
     2161 actcctttgc gacctttcaa atattttttc agtattggac cggtttctgg gcttctaaaa
     2221 tctttttcag atggcagagt caccatcaat ccacctgcaa tgtcttgagc caatcttcct
     2281 atttcatatg gaaatctggt aacattgtgt ttgcaaacat ttgccaacat gtcatcattt
     2341 aaccagacgc ctgacttcat acgatgagat tgatatgatg atgcaacacc tgctgcataa
     2401 atagactcgt taagatgagt catttccaca agcttgtccc tgatgtgtga gacgtttgga
     2461 ataccattat aatcagctat cgaagcagat gctccaatta gcacatctcc aagaccagtc
     2521 ttacaaacat aacttcgtct atgatagcag gtaaatcgct caaccagcat tgatgcaaat
     2581 tcgtattcac cattca
//
LOCUS       DASPUS010000170         2901 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_2015133, whole genome shotgun sequence.
ACCESSION   DASPUS010000170 DASPUS010000000
VERSION     DASPUS010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2901)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2901
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2015133"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(195..560)
                     /locus_tag="VEJ68_03970"
     CDS             complement(195..560)
                     /locus_tag="VEJ68_03970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HXX05960.1"
                     /translation="MKVLNGKSAAEDYMSSHTLTFSTPELTLIRFAGWLSDMVPDPKN
                     PGQQVPRVMTFIEEKDFAPVPVIDDDKFVPTGAVKTINGIYGNIKTESGSNTKFCSEC
                     GTKISSNARFCTECGSNQD"
     gene            complement(654..726)
                     /locus_tag="VEJ68_03975"
     tRNA            complement(654..726)
                     /locus_tag="VEJ68_03975"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(691..693),aa:Ala,seq:cgc)
     gene            802..2196
                     /locus_tag="VEJ68_03980"
     CDS             802..2196
                     /locus_tag="VEJ68_03980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HXX05961.1"
                     /translation="MTFDTLIMNSHVVLPNGIVDKNIMIDEGKILGLTNDIPQCDTKI
                     NANGLVALPGVIDPHVHYGVYSPIEQAALTESKVAAIGGITTMMRMLRLSGSYKKNLE
                     PHLSASAKSHYVDYSIHASILHEEQIDEMDFCTKKGITSFKLYMNLGDEVGHVYMDMQ
                     PNGNSLLEEKVEINTKIVEKVITKASELGCTVLVHAEDYQMCSCGIREARSKNKNGLA
                     AWSESRSVDSEVKSITTASQIARKTGCKLYFVHIGSQAAMESISKEKKHGTKIFVETC
                     PHYLTLSYESQQGFLAKVMPPIRTSKDKDMIWNAVQDGKIDSIGTDHVANRLNLKLGG
                     STVWDALAGFPGIGTMLPILLSEGVNKGKITLQQLANLTSTNTAKIFEMYPKKGIIQK
                     GSDADIVLVDLKQEKKVSSELLDGFSDYSVYEGWAMKGWPVKTLVRGSVVSEDLKVIQ
                     KPGYGKFISRPTSS"
     gene            complement(2191..2862)
                     /gene="rpiA"
                     /locus_tag="VEJ68_03985"
     CDS             complement(2191..2862)
                     /gene="rpiA"
                     /locus_tag="VEJ68_03985"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008297758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HXX05962.1"
                     /translation="MTLDDAIKALSPQALKMIKNNFVIGLGSGRAATAIVRSLSLHLK
                     KNHLSVVAIPTSLQIKIEAEKGGIPIIEPDQIDHIDLVFDGADQIDASGNMIKGGGGA
                     LLREKILISIAKRVVIIADESKFAKKLDRSVPIEVHQFARNIATIQIRKLGGKPHMRL
                     LDRGYPFVTENGNIILDCEFGKISKPRELARKIIEIPGVIEVGIFSKPNIIYKIKENG
                     KFEIL"
BASE COUNT          888 a          532 c          529 g          952 t
ORIGIN      
        1 ctggcgccgg tcgacctcca tctataatct ctgcagcttc tgcattttct acaccaggcg
       61 tgttacctac acctgatcct gcattattgc cacaaaatac atctgctaat ctatcctgta
      121 gttcctgtgg atctcctctt aaggctactt caaaattttg caccaaatgc ggaactaaga
      181 ttcaataaaa ataactagtc ttgattggat ccacattcgg tacagaatct agcatttgat
      241 gaaattttcg ttccacattc tgaacaaaat tttgtatttg aacctgattc tgttttgata
      301 tttccataaa taccatttat tgtttttaca gcaccagttg gaacaaattt gtcatcatca
      361 ataaccggaa ctggtgcaaa gtctttttct tcaataaaag tcataactct aggtacttgc
      421 tgtccaggat tttttggatc aggaaccata tcacttaacc atccggcaaa tcgaattaaa
      481 gtcaattcag gtgtagaaaa ggtcaatgtg tggcttgaca tgtaatcttc tgctgctgat
      541 tttccattta ataccttcat cattttgatt accgacgttg gctgtatatt gttttttgct
      601 tgcatcttat agatcataat tggaatagat aattactgag atgaaattgt gaatggaccg
      661 ggggggactt gaacccccga catcctcgtt gcgaacgagg cataactacc actagactac
      721 cggccctttt gttatcaaga atggtatctg cttttattca tttactcaaa gaataatact
      781 gggattttga caaaagtttt gatgactttt gataccttaa ttatgaattc ccatgttgta
      841 ttgccaaacg gtatagttga taagaatatc atgatagatg aaggtaagat cttaggtctt
      901 acaaacgata ttcctcaatg tgataccaag ataaatgcta atggattagt tgcgttacca
      961 ggtgtgattg atccacatgt gcattatggt gtatattctc caatagaaca agcggcatta
     1021 acagaatcta aagttgctgc gataggagga ataactacta tgatgagaat gttacgctta
     1081 agcggttcat acaaaaaaaa tcttgaacct catctctctg ctagtgcaaa atcacattat
     1141 gtagattatt ctatccatgc ttcaattctt catgaagagc agattgatga aatggatttt
     1201 tgcacaaaga aaggaatcac ctcattcaaa ttgtatatga atctaggaga tgaggtagga
     1261 catgtctata tggatatgca accaaatgga aattctcttc ttgaagaaaa agtagagatc
     1321 aacacaaaaa ttgtagaaaa ggtaatcact aaagcatcgg aattgggatg cacagttctt
     1381 gttcatgctg aagactatca gatgtgttct tgtggtatac gtgaggcaag atctaaaaat
     1441 aagaatggtt tagccgcatg gtctgagagc agatccgtag actctgaggt aaaatcaatt
     1501 accactgcat cccagatagc aagaaaaacc ggttgtaaac tctattttgt gcatattggc
     1561 tctcaagctg caatggaatc aatttcaaaa gagaaaaaac atggtaccaa gatttttgtt
     1621 gagacatgtc ctcattatct tactttatca tatgaatcac aacaaggatt tcttgctaaa
     1681 gttatgccac caatcagaac atctaaggat aaagatatga tctggaatgc agtacaggat
     1741 ggaaaaattg attctatcgg taccgaccat gttgcaaata ggcttaatct aaagctcgga
     1801 ggtagcactg tctgggatgc tttggcagga tttccaggaa taggtacaat gttaccaatt
     1861 ttattaagtg agggagttaa caaaggcaaa ataaccctac aacaacttgc taatctcact
     1921 agcacgaata ctgcaaaaat attcgaaatg tatccaaaga aagggataat ccaaaaagga
     1981 tcggatgcag acattgttct tgttgatttg aaacaagaga agaaggtaag ttcagaactt
     2041 ttagacggct tttctgatta cagtgtatat gaaggatggg caatgaaagg atggccagta
     2101 aagactcttg tgagaggctc tgttgtatct gaagatctta aagtaatcca aaaacctggc
     2161 tatggcaaat ttatttcaag gccaacttca tcataagatc tcaaactttc cattttcttt
     2221 aatcttgtag attatgtttg gttttgagaa gatccctact tcaattacac ctgggatctc
     2281 tattattttt cttgcaagtt ctctaggttt tgagattttt ccaaactcac aatctaatat
     2341 aatgttccca ttttcggtca caaatggata tcctcgatct aataatctca tatgtggttt
     2401 gccaccaagt tttctaattt gtattgttgc tatatttctt gcaaactggt gaacctcaat
     2461 tggtacactc ctatcaagtt tttttgcaaa ttttgattca tcagctataa ttactactct
     2521 cttagcaata ctgataagaa ttttttctcg taggagtgct cctccacctc cttttatcat
     2581 gttaccgctt gcatctattt gatcagctcc atcaaaaacc agatctatgt gatcaatttg
     2641 atctggttct atgattggta tgcctccttt ttcagcttca attttaattt gtagggatgt
     2701 tggaatggct actactgaca agtgattttt ctttagatgt aatgatagtg atctaactat
     2761 agctgttgca gccctaccgc ttcctaatcc tatgacaaag ttgtttttta tcattttcag
     2821 cgcttgaggc gataatgcct ttatggcatc atccaatgtc aattattcta cctctacttg
     2881 ttctagtttg gataatgctc g
//
LOCUS       DASPUS010000171         2398 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_365207, whole genome shotgun sequence.
ACCESSION   DASPUS010000171 DASPUS010000000
VERSION     DASPUS010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2398)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2398)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2398
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_365207"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VEJ68_03990"
     CDS             complement(<1..182)
                     /locus_tag="VEJ68_03990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase domain-containing
                     protein"
                     /protein_id="HXX05963.1"
                     /translation="MLKVAFQGEHGAYSEAAATLFFKEPIDTVPYPTFYEVLESVEND
                     RADYAVLPVENSLEGSV"
     gene            complement(187..741)
                     /locus_tag="VEJ68_03995"
     CDS             complement(187..741)
                     /locus_tag="VEJ68_03995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exosome complex RNA-binding protein Csl4"
                     /protein_id="HXX05964.1"
                     /translation="MSDKPALPGDKIAMIEEYETGQNTFDDGQSIRSVVVGTTEFDKT
                     NRIAKINEFKKTSVPKVGDVVIGTISALMNNMFALNIMYINGKPTHADIECICQARGA
                     KKRILVRVSDIVMAKIISHLNGVIHAIINEPELGVLFSQCIKCGGKVVMLGSNIKCTD
                     CGYIEERKLSSKFGNSDFIKFNSN"
     gene            complement(850..1845)
                     /gene="dph2"
                     /locus_tag="VEJ68_04000"
     CDS             complement(850..1845)
                     /gene="dph2"
                     /locus_tag="VEJ68_04000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043364 - glycyl-radical enzyme activating
                     activity [Evidence IEA];
                     GO_process: GO:0017183 - protein histidyl modification to
                     diphthamide [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diphthamide biosynthesis enzyme Dph2"
                     /protein_id="HXX05965.1"
                     /translation="MIIIDEKKIFDEIQRRKPVSVALNGPDGILPKIQDTAIKIMSTF
                     GIPAYVLADSCFGTCDLNSNGAKVLGTEILFHIGHSINSTTFGDNIVLIDAFDDVSFD
                     NVAKKCVNELVGKTVSLVTDSQHLHEIEKVKKTLEDGGIKVKIGKGKGQLNDGQVFGC
                     EFYPVTETKNSVDANVFLGQSNFHAAGIALSTNKPTYVLDPYFNEMREVTEFSQKLQK
                     KAILSIYKAAEAESFGIIVGLKEGQFSKITALKFKKELELLGKQVQLFALTDITDEKL
                     RNLKGIDAFIQVACPRISTDNHFHKPVLSSPQANALLKILRKESVEGFLQIPHWL"
     gene            1925..2155
                     /locus_tag="VEJ68_04005"
     CDS             1925..2155
                     /locus_tag="VEJ68_04005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HXX05966.1"
                     /translation="MPIAFVLVNAELGTENELLNQLKAIEHVKYVYVLYGAYDLVVKV
                     EAPDNETLKKTISNNIRQLKNVRSTLTMTVIE"
     gene            2152..>2398
                     /locus_tag="VEJ68_04010"
     CDS             2152..>2398
                     /locus_tag="VEJ68_04010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016939493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HXX05967.1"
                     /translation="MKQTILHIGFDDTDSAKGMCTTFLAYKIVEYLKREKVKFLDYPY
                     LIRFNPNIPWKTRGNGAVALKISTTKPNLIKKNIIRFI"
BASE COUNT          735 a          469 c          394 g          800 t
ORIGIN      
        1 acgcttcctt caagtgagtt ttcaactggt aatacagcat agtctgctct atcattctca
       61 actgattcaa gaacctcata aaaagtcgga taaggaactg tatctatggg ttccttgaaa
      121 aagagagttg cagccgcctc actataagca ccgtgttctc cctgaaatgc tacttttaac
      181 atgtttttaa ttcgaattga attttataaa atcgctgttt ccaaattttg aagacagttt
      241 tcgctcttcg atgtaaccac aatctgtaca ctttatgttg ctaccaagca taaccacctt
      301 gccgccgcac ttgatgcatt gagaaaataa aactccaagc tcaggctcat taattattgc
      361 atgtatgact ccattaagat gactgattat cttggccata acaatgtcgc tgactctcac
      421 aaggatcctc ttctttgctc cccttgcttg acatatgcac tcaatatcgg cgtgtgtagg
      481 tttaccattt atgtacatta tatttaatgc aaacatatta ttcatcagag ctgaaattgt
      541 tccaattaca acgtctccaa ctttgggaac tgaggttttt ttgaattcat tgattttagc
      601 tatacgattt gtcttgtcga attccgttgt tccaactact acagacctta tagattgtcc
      661 atcatcaaat gtattttgac ctgtttcata ttcctcaatc atcgctatct tatctcctgg
      721 aagagcaggt ttgtcagaca ataaataaac tcaggattcg atgattataa ttgttattag
      781 cctgcaattg ttcataatag actaaaattt cgagaaatta taactatatt ttaactggat
      841 cgtaattatt tatagccaat gaggaatctg aagaaacccc tctacacttt cttttcttaa
      901 tattttgagc agtgcattgg cttgaggaga tgacaaaaca ggtttatgaa aatggttgtc
      961 cgtggatatt ctagggcaag ctacttgaat gaatgcatct attcccttta gattacgaag
     1021 tttttcatct gttatgtcag ttaatgcaaa gagctgaact tgctttccca ggagttctaa
     1081 ctcctttttg aatttcagag ctgttatttt tgaaaattga ccctctttta gtccgacgat
     1141 aattccaaag gactctgctt cagccgcttt gtaaattgat agtattgctt ttttctgtaa
     1201 cttttgtgaa aattcagtca cttctctcat ctcgttaaaa tacggatcaa gaacataggt
     1261 aggtttgttg gtagataacg caattcctgc agcatgaaaa ttactctgac ccaagaacac
     1321 atttgcatct acactgttct tggtctctgt cacgggatag aactcacatc caaaaacttg
     1381 tccatcattc agttgaccct ttcctttgcc tattttcact ttaatacctc catcttctag
     1441 ggtttttttc actttttcaa tctcatgaag gtgctggctg tcagttacta acgaaactgt
     1501 ttttcctaca agttcattaa cacatttctt ggcaacatta tcaaaggaaa catcatcgaa
     1561 tgcatcaatg agaactatgt tatctccaaa agttgtagaa tttattgaat ggcctatatg
     1621 aaacaaaatc tcggttccga gtaccttggc tccattgcta ttcaagtcgc aagtcccaaa
     1681 acaactatct gcaagaacat atgcagggat tccaaacgtg ctcattatct taattgctgt
     1741 atcttgaatc ttgggaagga taccatcagg tccattcaac gctaccgaga caggttttct
     1801 tctttgaatc tcgtcgaaaa tcttcttttc gtctattatt atcaatcgta atccaagatt
     1861 gtttttttaa tttaaatcaa gcgaacacac aatatttaat attgtagcat ctgaacacca
     1921 actgatgcca atagcattcg tacttgtaaa cgctgaattg ggaacagaaa atgagttgtt
     1981 aaaccaactt aaagccattg aacatgtaaa gtatgtctat gttctctatg gcgcatatga
     2041 tttagtggta aaagttgagg ctcccgataa tgagaccttg aagaagacta tatccaacaa
     2101 cataaggcaa ctcaaaaatg tacgttctac attgactatg actgtaatag aatgaagcaa
     2161 actatacttc acattggatt tgatgatacg gattctgcaa aaggaatgtg tactacattt
     2221 cttgcttaca aaatcgttga atacttgaag agagaaaaag taaagttctt ggattatcca
     2281 tatttaataa gatttaatcc aaacatacca tggaagacta gaggaaatgg tgcggttgca
     2341 ctaaaaatca gcacaactaa acctaatcta attaagaaga atataattcg gtttatca
//
LOCUS       DASPUS010000172         3458 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_365393, whole genome shotgun sequence.
ACCESSION   DASPUS010000172 DASPUS010000000
VERSION     DASPUS010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3458)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3458)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3458
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_365393"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..658)
                     /locus_tag="VEJ68_04015"
     CDS             complement(<1..658)
                     /locus_tag="VEJ68_04015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HXX05968.1"
                     /translation="MGISEPRHVERHQKETSTIRDFVFGFGDGINTSLGLVAGVGGAN
                     ESSSIIILAALVAMFTGAKAMAVQNYLAVRSQRQILQSEIEREKWEMENVPEAEIQEI
                     EDIYKAKGFSGIELESIVKKITSDKIVWLDTMLTEELKLNLEIVGSPLKSAFRMFGAF
                     LVGGILPIIPYFFSSGNIPLLIAIGTSLSASFVIGAFKSKLANLNMIRGGLEMAGMGT
                     G"
     gene            766..2331
                     /locus_tag="VEJ68_04020"
     CDS             766..2331
                     /locus_tag="VEJ68_04020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HXX05969.1"
                     /translation="MPGKRIVLTADRSLMTNYRGNFLYGFIACGPYEVLPEWVFDKVF
                     CPAVETDQVTGEAKVAQVGLRRVEAALLQGYKRDEVFIANPDYLEKCIGPDTKVVGIN
                     VMDPLGMAPVTTTMSPEKLSYVAMKFKRMCAKVIQLKKKYDFHVAVGGNGAWELAKTE
                     RMKIHGIDTVVVGEADELALDLFHDLEKGDAPELMHCFVKNIQNIPIIQGPTVNSLIE
                     AMRGCGRGCDFCDVNKRSKKDLPLERLQHEAKINLNYGFDSIWLHSDEMLLYGCDNRE
                     FRPNYDAITELWKGLKSLGARFVGTTHMTFSAVCADPKLFHDISEINQMSNEKWLATN
                     LGIETVAPKMVKKHLGVKTKPFSTDEWGWVVREGAKIMNQNHWFPAATLIIGWPDETP
                     DETQYTIDLVEDFKHMNMRGILAPLLYQDFNEKNSMHFGNLNEAQFTLFWKCWEHNLR
                     VINDIIPIILRNKTYGPMMKPVMYGMIKAGTWAIMRYLRGLCKELFNGKLPEDIMEKY
                     ARSRSVSAPAYTR"
     gene            complement(2324..2659)
                     /locus_tag="VEJ68_04025"
     CDS             complement(2324..2659)
                     /locus_tag="VEJ68_04025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05970.1"
                     /translation="MNFEFEEFDSSEDIFVYMSTMAPPMKNMLPINSYKGYIFSMIPL
                     TPTTGNSYLFIYTKGKLEGKLLEFDMNLKKFKVVETAERTDKNYFVVLTPKRNTIADA
                     AIEELEKSI"
     gene            complement(2843..>3458)
                     /locus_tag="VEJ68_04030"
     CDS             complement(2843..>3458)
                     /locus_tag="VEJ68_04030"
                     /inference="COORDINATES: protein motif:HMM:TIGR04296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PEFG-CTERM sorting domain-containing protein"
                     /protein_id="HXX05971.1"
                     /translation="LWTTAGNYTVKAQYGPALNATANFYFSGGNGQSIINTVTNGTYA
                     LQAGQMMFNIPYTIQGGTIQSMQAIPSQSSVMITISSTADGSLTVDLPRALIDAKQQP
                     PTSNSQNNTVTTQYNQAELPDQPFVVQINGQNVKASQTSDPNSRTLGIPFHKGDTTIY
                     IIGTVAVPEFGPIAALVLAIAIVSIIAVSAKTGLRFMPKYYGAA"
BASE COUNT         1054 a          614 c          717 g         1073 t
ORIGIN      
        1 taccggtacc cataccggcc atttcaagtc ctccgcggat catgttgaga ttggcaagtt
       61 ttgacttgaa tgctccgata acaaaagagg cggatagact agtccctatt gcaatcagta
      121 gaggtatgtt accacttgag aaaaagtatg gtattatggg aagtattcct cctacgagaa
      181 aggccccaaa catacgaaat gcacttttca atgggcttcc cactatctcc agatttaatt
      241 tcaattcttc tgtaagcata gtatccaacc agactatttt atctgaagtt atttttttta
      301 caatgctctc gagctcaatc ccagagaatc cttttgcttt gtagatgtct tctatctcct
      361 gtatctcagc ctctggaaca ttttccatct cccatttttc tcgttctatt tcagattgta
      421 ggatctgtct ttgtgatctc actgctaagt agttctgaac cgccattgct tttgcaccag
      481 taaacattgc cactaaagca gccaatatga ttatacttga agattcattg gctccaccaa
      541 ctccagcgac taatcctaac gaggtgttta taccatctcc aaaaccaaat acaaagtccc
      601 tgattgtact ggtttctttc tgatgtcgct caacatgtct tggttcagaa atgcccattc
      661 tatagagtat atactaccga tttatatgtc gaaggcaaaa atttttcaaa atcaggcatt
      721 agggtaaacg atttatatca tagtgaaaaa gaactagaga aggaaatgcc aggcaagaga
      781 atagttctta ccgcggatcg tagcctgatg accaattacc gaggtaattt tctgtatgga
      841 tttattgcat gtggaccata cgaggttctt ccagagtggg tgtttgacaa agtattctgt
      901 ccggcggtag aaacagatca agttacggga gaggcaaagg ttgctcaggt aggattgcgt
      961 agagttgaag cagcactttt acaaggttac aaaagagacg aagttttcat agccaatcct
     1021 gattatttag aaaagtgtat tgggcctgat accaaagttg tcggaataaa tgttatggac
     1081 cctcttggta tggcacctgt tactactacc atgtcaccag aaaagctatc atacgtagct
     1141 atgaaattca agaggatgtg tgcaaaggta attcaactca agaaaaaata cgacttccat
     1201 gtagcagttg gaggaaatgg cgcatgggaa cttgcaaaga ccgaaagaat gaaaattcat
     1261 ggtattgata ctgttgtagt aggcgaagcc gatgagcttg cgctagatct atttcatgat
     1321 ttagagaaag gtgatgctcc agaattaatg cattgttttg taaaaaatat tcagaatata
     1381 ccaataattc aaggtcctac tgtgaattca ctcattgagg caatgcgagg atgcggaaga
     1441 ggctgtgact tttgtgatgt taataaacga tctaaaaaag atctaccatt ggaaagattg
     1501 cagcacgaag caaaaataaa tcttaactat ggatttgact caatttggct tcattctgat
     1561 gagatgttac tttatggctg tgataataga gagtttagac caaactatga cgcaataaca
     1621 gagttgtgga aaggactaaa atcacttggt gctagatttg ttgggacaac ccacatgaca
     1681 ttctctgcgg tatgtgctga tccaaaatta ttccatgata tatctgagat taaccaaatg
     1741 agtaatgaga aatggcttgc aacaaatctg ggtatcgaaa cagtggcacc gaaaatggtg
     1801 aagaaacatc ttggagtaaa gacaaaacca ttttccacag atgaatgggg atgggtggta
     1861 agagaagggg caaagataat gaatcaaaac cattggttcc ctgcagctac cttgattata
     1921 ggatggcctg atgaaacacc tgatgagaca caatatacta tagatttggt agaagatttc
     1981 aagcacatga atatgagggg tatacttgcg ccactacttt atcaagactt taatgaaaag
     2041 aattctatgc acttcggcaa tctcaatgag gcgcagttta cgctattctg gaaatgctgg
     2101 gaacacaacc tgagagtaat taatgatatt attcccataa ttcttagaaa taagacctat
     2161 ggtcctatga tgaaaccagt aatgtatggg atgataaagg ctggaacttg ggcaataatg
     2221 cgttatttac gtggattgtg caaggagtta ttcaacggaa aactcccaga agacataatg
     2281 gagaaatatg ctaggagcag gtcagttagc gcgcctgcat atactagata gatttttcta
     2341 gctcttcaat agcagcatcg gcaatagtgt ttctcttagg ggtcaaaact acgaaatagt
     2401 tcttgtctgt tctttctgca gtttcaacta ccttgaactt ttttaaattc atgtcaaatt
     2461 caagcaattt tccttcaagt ttccctttgg tatagataaa tagataggag ttacctgtag
     2521 tgggagttag tgggatcatt gagaatatgt atcctttgta cgaatttatt ggtaacatat
     2581 tcttcattgg tggcgccatg gttgacatgt aaacaaatat gtcttcagaa gaatcaaatt
     2641 cttcaaattc aaaattcata ctatgctctt tcatcaagtt gtataataat ctataagtgt
     2701 aatttttaat tcctgccatc aaaatgttcg taagatgaaa tgaattatgc caataaatgc
     2761 caaattaaaa attaagtgat taaattccca aattgttggc aggaagaaag tgctaaagta
     2821 gaatttggaa aaatatcttt gtttatgctg caccgtaata ttttggcata aatcttaacc
     2881 cagtctttgc tgacactgca attattgata caattgcaat tgcaagtact agagctgcga
     2941 tcggaccaaa ttctggaact gcaactgtac ctatgatgta tattgtagta tcacccttgt
     3001 ggaaaggtat tcctaatgtt cttgagttcg ggtctgatgt ctgacttgct ttcacatttt
     3061 gtccgtttat ttgtactacg aatggttgat ctggcaattc tgcttgattg tattgtgtcg
     3121 ttactgtatt attctggctg ttactggtag gtggttgttg tttggcatca atcagtgctc
     3181 ttggtaggtc aacagttagc gaaccatctg ctgttgagct gattgtgatc atgactgacg
     3241 actgacttgg aatagcttgc atgctttgaa tagttccacc ctgaattgtg taaggtatat
     3301 tgaacatcat ttgccctgct tgtaacgcat aagtgccatt tgtcactgta tttattattg
     3361 attgaccatt gcctccacta aaatagaagt ttgcggttgc attgagagct ggtccatact
     3421 gagctttaac tgtgtaattc ccagcagttg tccataat
//
LOCUS       DASPUS010000173         6436 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1049211, whole genome shotgun sequence.
ACCESSION   DASPUS010000173 DASPUS010000000
VERSION     DASPUS010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 6436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6436)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6436
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1049211"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..316)
                     /locus_tag="VEJ68_04035"
     CDS             complement(71..316)
                     /locus_tag="VEJ68_04035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05972.1"
                     /translation="MHKDRGTCRGICKEFKVRKPKDGTSRYLSGQVRCNICGVFISRQ
                     GCHDREDKPATDDTVDLYCNCCNCMVRSKPRNKPKIV"
     gene            complement(357..884)
                     /locus_tag="VEJ68_04040"
     CDS             complement(357..884)
                     /locus_tag="VEJ68_04040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05973.1"
                     /translation="MHFFSAKSYLKILAIVALVFVPSIVYGYDGKENTAAVTLGWLAI
                     GCGVAANITLVGFKIVRKKIPMKVVIGSGTSQSLAPLYMPILNFHIMLNSVGFFAGMA
                     HGFFLIRGLDYISLSLVIVMTVSMASGIMLKYTSDKNLKFFNRLIHGQVILAVLLVTL
                     VILHVITKWPHGLGN"
     gene            complement(890..1192)
                     /locus_tag="VEJ68_04045"
     CDS             complement(890..1192)
                     /locus_tag="VEJ68_04045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05974.1"
                     /translation="MKNSSYGILAFVILLASTPTLALADSDGDQGSYQAQQQQSSPAP
                     VSTQTEHQESGTGHNVISAYSNLVLYGTISAILWVVGYSAWKVYKVRRKVASRNLV"
     gene            1339..1674
                     /locus_tag="VEJ68_04050"
     CDS             1339..1674
                     /locus_tag="VEJ68_04050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HXX05975.1"
                     /translation="MTSLKTEMEFNSMQKTIPKHQYRTSMGILSEILQIIMDAGMDGV
                     MVSELSRRSNLSYRVTVENCQKLIDASLIESIRRGRNSLFAITPQGIGFFREFKKFQE
                     ITCQMNLRC"
     gene            1733..2107
                     /locus_tag="VEJ68_04055"
     CDS             1733..2107
                     /locus_tag="VEJ68_04055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05976.1"
                     /translation="MGIFQKKGLAFEKIDLSKSKINSDETTKITINIKNFKEKFDDIS
                     VLIKTDDASNQYLQISQSTLRLPSLDFPNRNTGDQVITLNPINIPVQKMSFKITIEVY
                     SDNGKKLMLKKEFNLTVNKKKI"
     gene            2261..2461
                     /locus_tag="VEJ68_04060"
     CDS             2261..2461
                     /locus_tag="VEJ68_04060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05977.1"
                     /translation="MDKPSVDEMWAFIEKILLPYDDVPDRTRMNEDKIFELYSMIKDA
                     DELFRMLAKIATLKKAIEDRRI"
     gene            2526..2789
                     /locus_tag="VEJ68_04065"
     CDS             2526..2789
                     /locus_tag="VEJ68_04065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05978.1"
                     /translation="MEEGFLSLRSLQKVWSGMKRGYSQSPNYSKFNQHLSELILEVEG
                     IKLRAEKNDMGGIKEHLDRMNAILLEFMDARMDLVEKCRNIAN"
     gene            2924..3268
                     /locus_tag="VEJ68_04070"
     CDS             2924..3268
                     /locus_tag="VEJ68_04070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MscL family protein"
                     /protein_id="HXX05979.1"
                     /translation="MAEAAPPEKQSFIQEFVDFLNKFAVIGLAIAFVIGQAASKLISA
                     FVNDLITPLIGLLTPNVGDLNKVHFTVGNSVFSYGDLISNVINFLIIALIVFLAYKQL
                     SKFGLMKDPVKG"
     gene            complement(3282..3665)
                     /locus_tag="VEJ68_04075"
     CDS             complement(3282..3665)
                     /locus_tag="VEJ68_04075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05980.1"
                     /translation="MVALLPLLVPTSLAQYYWIHHTKLVLMPIPRNLEQGHQITFSGK
                     LLTSDDNTPLPNRLIFIQYDSPYDRTRTLASTTTDSNGNFAVYWTAKPKGFSGGSYNL
                     FAKFNGDDETFWSLSKQFSLNVTPK"
     gene            complement(3807..3947)
                     /locus_tag="VEJ68_04080"
     CDS             complement(3807..3947)
                     /locus_tag="VEJ68_04080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05981.1"
                     /translation="MDIKMGLQALIACAMMTLPAFYADIVSASAQMTVKSVISVLVVG
                     MV"
     gene            complement(4376..5917)
                     /locus_tag="VEJ68_04085"
     CDS             complement(4376..5917)
                     /locus_tag="VEJ68_04085"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HXX05982.1"
                     /translation="MRALPTSYFNYIIPLALFAGSFFIYSYNLEGQPWHGDEVTYLGW
                     AGNYVKLLKQGDLSNPCLRSLDDCDLLFHLPAFGLTYSHLRNLFIGFPMVLENKDSGD
                     FYNWSCYWDCYNSSKGPTVTEMTAGRLLSPLFGSLTIVISYMIGKILFNRYIGITFSL
                     LFLFYDLWIWYSRTIMTEVHYIFFSMLAFLLLLYAVKKGNLRIKYLVASAISFGFALS
                     TKMLAIEFSVLFLGIILYGIVSNRKTEPTGKRSVPKIILAISIFFAISGLSLFLAQPG
                     FYHNPLQQITIMKSDMDNYNRDVWYIGYPTIHGIQPARILALFHYTVFPSFIEKQVAN
                     PNLNLSGNFGWTYPPTFSSIPISIFFFVGIGSLIYNVGKFRRLSAEALLLVWFVSAFI
                     FTLLIARDFSLERYLLPYMITIIFIASYGLWVFIKNIKHHKTKIVFSIYFILVHSMTA
                     MSYWQKIYFSPQTTWVNPLHYGTLQDSFDYFLTFGLNMSFVVFFIGMVIIQLGQRMKK
                     QIEVK"
     gene            complement(6024..6422)
                     /locus_tag="VEJ68_04090"
     CDS             complement(6024..6422)
                     /locus_tag="VEJ68_04090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05983.1"
                     /translation="MNNRVLAAITGGGISALIVFLVLTFLPIIPPSEKYDISVDPIIV
                     KDDMGTEMHVAIKNTGMDVLTNVTVIYGGAAKSDVIPSLNPGEKISLSPPQGSNLNYV
                     RVTTNEGIDLTQPYRTPSSAPFVGNSGYGG"
BASE COUNT         2158 a         1147 c         1187 g         1944 t
ORIGIN      
        1 tatgagaaaa ataagagata tccaaaatat aacaagcagt aaatcctcga ttggttcctg
       61 ttagttcatg ctacacaatt tttggcttgt ttcttggctt tgagcgtacc atgcagttgc
      121 aacaattaca atacaaatct acagtatcgt ctgttgcagg cttgtcttcc ctgtcatggc
      181 atccttgtct tgaaataaaa acaccacaaa tattgcatcg cacctgacct gagagatatc
      241 gactagtacc atcctttggc tttcttacct tgaattcttt acaaatacct ctacaagttc
      301 ctctgtcttt gtgcacacta gttcaatatt tgggataaat aaattcccat cttgacctag
      361 tttccaagtc cgtgtggcca tttggtaatc acatgtaaaa taactagagt cacaagcaac
      421 acggcaagga taacttggcc atgaattagt ctgttaaaga atttcaggtt tttatctgat
      481 gtatatttga gcattatccc gcttgccatt gagacagtca tgacaataac taatgagagt
      541 gagatatagt ccagtcctct gatgaggaaa aacccatgag ccatgcctgc aaagaatccc
      601 acagagttta gcattatgtg aaaattcaat attggcatgt acaagggagc caaactttgt
      661 gatgtgcctg agccaataac caccttcatc ggaatcttct ttcttacaat cttgaatcct
      721 actagtgtta tgtttgcagc aacaccacat cctattgcta accagccaag tgtcacggct
      781 gcagtgtttt cttttccatc ataaccgtat actatgcttg gcacaaaaac tagcgctaca
      841 attgctaata ttttcaaata tgatttagca gaaaaaaaat gcataatgtt tacaccaaat
      901 tccttgatgc aacctttctt cttaccttgt acaccttcca ggcagagtat cccactaccc
      961 agagtattgc ggaaatggtt ccatataaca caagattgga atatgcagaa attacattat
     1021 gtccagttcc actttcttga tgttctgttt gtgttgatac aggtgcagga gatgattgtt
     1081 gctgttgggc ttgatatgat ccttggtcac catccgagtc tgcaagagcc agtgttggtg
     1141 tacttgcaag aaggataaca aatgccaaaa ttccatatga agaatttttc atcaccaaac
     1201 agtagataat tctaaataaa acagattcta ccattctcat ccataaaaat ggctgtgtac
     1261 ctgttgtttt cttttcacta acaatgttca ctaacttggt tcgacaagtg ttttatttga
     1321 aaaaattatt ctcaacctat gacaagtcta aaaactgaaa tggaattcaa ttccatgcaa
     1381 aaaacaatac caaaacatca gtacaggact tctatgggaa tactttctga gatcctgcaa
     1441 attataatgg atgcaggcat ggatggggtc atggtctccg agctgtcacg cagatcaaat
     1501 ttgtcataca gggtaacggt tgagaactgt caaaagttaa tcgacgcatc tctcatagaa
     1561 tcgattagaa ggggtagaaa ctctctcttt gctattactc cacaaggaat agggtttttc
     1621 agagaattta aaaaatttca agaaattacc tgccaaatga accttagatg ctaaattaag
     1681 caaatcccgt tactttattt atggtaaaga tgcccgaagt aggtgataaa cattgggaat
     1741 attccaaaaa aaaggtctag cctttgaaaa aatagatctc tcaaaatcaa agataaactc
     1801 ggacgagact acaaaaataa caattaatat caaaaatttt aaggaaaaat tcgacgatat
     1861 ttccgtatta ataaagacag atgatgcctc taaccaatat cttcagatta gtcagtcaac
     1921 acttaggctt ccgtctctgg attttcctaa cagaaatacg ggtgaccaag taatcacact
     1981 taacccaata aacatcccag ttcaaaaaat gtcttttaaa ataacaattg aggtatattc
     2041 agataatgga aaaaaattaa tgctaaaaaa agaatttaat ctgactgtaa acaaaaagaa
     2101 aatttagaca acaccgatga aataacatct tgagcagata aactggaaca tccatatttg
     2161 gaaaattctc cttgtattca gatcctcatt aagatctaga gaaaatattt tccaatgttg
     2221 gcaggacaat tttttatcgt caaaccttca aatcagcata atggacaagc cttcagtcga
     2281 tgagatgtgg gcttttattg aaaaaatatt gttgccgtat gatgatgtgc ctgataggac
     2341 aaggatgaat gaagataaaa tattcgaact ttattctatg ataaaggatg cagatgaact
     2401 gttcaggatg cttgccaaaa ttgctacttt aaaaaaagcc attgaagaca ggagaatcta
     2461 aattgtgaga ttgaaatttt gtaattaact tgaaataaag attggttaga tcgtaatttc
     2521 catttgtgga agaggggttt ttatcattgc gatcattaca aaaggtatgg tctggaatga
     2581 aaagaggtta ctcgcagagt cctaattatt cgaaattcaa ccagcatctc tcagaattga
     2641 tcctagaggt agaagggata aagctacgag ctgaaaaaaa cgatatgggg ggaatcaagg
     2701 aacacctgga tagaatgaat gccatacttt tagaatttat ggacgcaaga atggaccttg
     2761 tagaaaaatg tcgtaacata gcaaactgat caaatagtat tacaaactat cacacggata
     2821 agcagattat atcatatcaa atgatctttc aaatcctttt agaagcaagt agatgaataa
     2881 ttttgaccaa tctcaagtta tatgactagt actgccaaaa tacatggctg aggcagcacc
     2941 acctgaaaaa caatccttta ttcaggaatt tgttgatttt ttaaacaagt ttgctgtaat
     3001 tggtcttgca attgcatttg tgatagggca agcagcctca aaattaatta gcgcgtttgt
     3061 aaatgatctg ataacgccac ttattggact gctgactcct aacgttggtg atctcaacaa
     3121 ggtacacttc acggttggta actctgtatt ctcatatggc gatctaatat cgaatgtcat
     3181 taacttctta attatagcat taattgtatt tcttgcatac aagcagctct caaagtttgg
     3241 tttgatgaaa gatccagtaa agggataatt ctaatcaagt tctatttggg ggttacattc
     3301 aatgaaaatt gtttgcttag ggaccagaag gtttcatcat cgccattaaa ttttgcaaaa
     3361 aggttgtatg agccgccact aaaccccttt ggcttggctg tccagtatac tgcaaaattt
     3421 ccattgctat cagttgtggt acttgcaagt gttctggtac gatcatatgg agaatcatat
     3481 tgtatgaata tcaatctgtt tggcagtggg gtgttatcat ctgatgttaa gagttttcct
     3541 gaaaaagtta tctgatgtcc ttgttccaga ttacgtggta tgggcatcag aactagtttg
     3601 gtatggtgta tccaataata ctgggcaagt gatgttggca caagtaacgg tagaagggct
     3661 accattatca aaataggaat ggtaaggttt ctgttcaaat gcttcgtaac accttatcag
     3721 tcgtagctta aaaataaaat ctcaatttga ttatgacttg ctaaaaattc tgtattgtag
     3781 gggtatttca aactacaatc tgggacttat accattccta ctactaggac agatatgact
     3841 gattttaccg tcatttgtgc gcttgctgat actatatcag catagaatgc tggtaatgtc
     3901 atcatggcac atgcaattaa tgcctggagt cccatcttta tgtccatgta aattagtacg
     3961 aatttttgct tataattagt tgcgacacat tattcactaa caaggttaac taacaaggtt
     4021 cggcaattgt tttattataa ataatcaaat gagacccatg cgatacaaga aaaaagtctt
     4081 cgagtttggc gatgtgagtg ttaaatttgc tcatcccgtc atagtcgaaa acaattgaaa
     4141 atatggaagc gaggattagc gtcaattatc caatcttcct tactatgtgg agagttccaa
     4201 taaatgtttg agagaaaaaa agatttccat tgtaaggaat gtggaatgaa atttgatgat
     4261 cctacaaggt tggaacgtca tttcagagcg gctcatccca caaagcccga aggatttaga
     4321 caaaaatggt attgggaaaa ttgatcaaga cgaatatttt gtaattataa tattttcatt
     4381 tcacttcaat ttgttttttc attctttgtc caagttgaat aattaccata ccgatgaaaa
     4441 atactacaaa tgacatgttc agaccaaaag taaggaaata atcaaacgaa tcctgcaatg
     4501 ttccatagtg aagaggattt acccatgttg tttgtggaga aaaatagatt ttctgccaat
     4561 atgacatggc agtcatggaa tgaaccaata tgaaataaat cgaaaaaaca atttttgttt
     4621 tgtgatgttt gatgtttttt atgaataccc atagaccata agaggcaatg aaaataattg
     4681 taatcatata aggtaataga tatctttcaa gagagaaatc ccttgcaatt aagagcgtaa
     4741 atatgaaagc gcttacaaac cacactagta atagtgcctc tgcagacaat ctcctaaatt
     4801 ttcctacatt gtaaattaat gagccaattc ctacaaagaa aaatatgctt atgggaatac
     4861 ttgagaaagt gggaggatac gtccagccaa aattgccact cagattaaga tttggattgg
     4921 ctacctgctt ttctatgaaa cttggaaaaa cggtataatg aaaaagtgcc aaaattctgg
     4981 caggctgaat gccatgaatg gtaggatatc caatatacca aacgtcgcga ttataattgt
     5041 ccatatcact cttcattatt gtaatctgct gcagtgggtt atgataaaat ccaggctgtg
     5101 ctaaaaataa cgacaagcct gatatcgcaa aaaatatcga gattgcaagt atgattttag
     5161 gaacagatct tttaccggta ggctctgttt tacgattgga tacaattcca tatagtatta
     5221 ttccaagaaa tagcactgaa aattctatgg ccaacatctt tgtacttaat gcaaaaccaa
     5281 atgagatggc gctagctacg agatacttga ttctaagatt tcctttctta acagcatata
     5341 gtaacaacaa aaatgcaagc atgctaaaga agatgtaatg aacctccgtc attatggtac
     5401 ggctatacca tatccaaagg tcatagaata ggaaaagtaa ggagaatgta atgccaatgt
     5461 atctgttgaa aaggattttt cctatcatat acgaaattac aatagtaagt gaaccaaaaa
     5521 gcggagaaag caaacgtccc gccgtcattt ctgtaactgt cggtccttta cttgaattat
     5581 aacaatccca ataacacgac caattgtaaa agtcaccgct atccttgttt tccaaaacca
     5641 tgggaaaacc tatgaacaga ttgcgaagat gactataagt caaaccaaat gctggcaagt
     5701 gaaacaagag atcacaatca tcaagggatc tcaaacatgg gttggagaga tctccttgct
     5761 ttaacaattt gacataattt ccagcccatc caaggtatgt tacttcatcc ccatgccaag
     5821 gctgtccttc taaattatat gaatagatga aaaatgatcc tgcaaataat gcaagaggaa
     5881 ttatgtaatt aaaatatgaa gttggaagag ctctcatttg attaacctct tcatggacgt
     5941 ttcttaaatg aacggttgaa cctagttaaa gccattctaa tatttgctca ggtctgccgg
     6001 ttttgtaaaa agaaatctac actctatccg ccataaccag aatttccaac aaatggggca
     6061 cttgaaggag tcctgtatgg ttgggttaag tcaattcctt catttgttgt aactctgaca
     6121 taattgaggt tacttccttg tggtggtgag agcgagatct tttctcctgg gttgagactt
     6181 gggatcacat cggattttgc agctccgcca taaattactg tgacattggt aagcacgtcc
     6241 atcccagtat ttttgatcgc aacatgcatc tcagtgccca tgtcatcttt tacgataatg
     6301 gggtcgacag aaatatcgta tttttctgag ggcggaatta ttggaaggaa cgtcaatacg
     6361 agaaatacaa tcaatgctga tattccgcca cctgttattg cagcaagaac tcgattattc
     6421 aactattatt agaata
//
LOCUS       DASPUS010000174         3665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1870271, whole genome shotgun sequence.
ACCESSION   DASPUS010000174 DASPUS010000000
VERSION     DASPUS010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3665)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3665
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1870271"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..274
                     /locus_tag="VEJ68_04095"
     CDS             <1..274
                     /locus_tag="VEJ68_04095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HXX05984.1"
                     /translation="TYYDPFAAQKIFDDYPDIGIEPIFYPAFFYCKKCLSFASEKNCP
                     HGEEFQEQLSGTKLRTMILEKQSPSEFMIRPEVFKVLMNWENPFVD"
     gene            373..972
                     /locus_tag="VEJ68_04100"
     CDS             373..972
                     /locus_tag="VEJ68_04100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05985.1"
                     /translation="MNKSEQYDLVDVPASAFNVVRNDATVFRLAHEHATNWQLEIQNK
                     LVYENPNGTAVIRLYEDLTKQKYIEIGMGSPPDHRFWVSVNTPEDGYFLIHDDKTDGW
                     APGQVVTVTHSSNSGLSVSVGPDVKVDSLDIAGFTIRAFTAYGMDSATDPPAVNSGNV
                     TLSFVSGNPSANPIFYMPTILLVGVGALIIVLMKTKKRT"
     gene            complement(956..1609)
                     /gene="nth"
                     /locus_tag="VEJ68_04105"
     CDS             complement(956..1609)
                     /gene="nth"
                     /locus_tag="VEJ68_04105"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014966126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HXX05986.1"
                     /translation="MERILNKMTRTMNSVKPPRMTALRELHEAEDGNPLSILIGTILS
                     ARTRDENTSAVVKKLFSRYKTSRALANAKLSDVEKIIKSTGFYHVKSKRIIEVASIID
                     LKYSGRVPETLEELLELPGVGRKTANCVLVYAFDKPAIPVDTHVHRISNRLGLVSTRT
                     PEETEIKLMQNIPKEHWIRINDIFVMYGQNICKPISPMCKVCQLKNECNYYKTKFSS"
     gene            1673..2827
                     /locus_tag="VEJ68_04110"
     CDS             1673..2827
                     /locus_tag="VEJ68_04110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase X catalytic domain-containing protein"
                     /protein_id="HXX05987.1"
                     /translation="MNLTKEEEAALDGKQGETLALAYRTLLAIGEATGADKLIPIEWA
                     HLSGVNYNTIGDAGEEFLSHISKDATFKVKTTVNPMGFDFDTVSKYNLDDEFIKKQEN
                     IKLSYEKMGAIPSFSCIPYEIFQLPNKDSHVSFAESNAAIYANSISGLKTNKEGAFSA
                     LASAITGKSPYSDLREEGNRSPKLTIRMKVEQKDELTYGLLGYFAGKVDESSVSISGT
                     KELDKRSCKSLCAGMGTSGRCGMFTLGEDGGEKIDFDKKEMQKVHDELNTSESGDLIT
                     LGSPQLGFDEISDLSSMLKGRSFTKRCMIFCPRAIQGQIRKMGYENEIKRAGGELLYD
                     CCICLTPLVDKKDVDSVITNSVKGAYYLKTSNEVDVNLKSLRQIIQEETK"
     gene            2824..3207
                     /locus_tag="VEJ68_04115"
     CDS             2824..3207
                     /locus_tag="VEJ68_04115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF126 domain-containing protein"
                     /protein_id="HXX05988.1"
                     /translation="MTLKVIVRGKTRGTILVSKNPINFLGGVDKKTGRIRDEKHDLFG
                     KILANKILVFPYGIGSSVGAYTIYSLKYNKCAPIAMICLKADLTTASGCAISNIPLLV
                     AEKEEYESLKDGQDVFVDAIDGKIL"
     gene            complement(3202..>3665)
                     /locus_tag="VEJ68_04120"
     CDS             complement(3202..>3665)
                     /locus_tag="VEJ68_04120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TIGR00296 family protein"
                     /protein_id="HXX05989.1"
                     /translation="VTLSKEDNLRGCIGFPTPDRKLYLSFIDAAISSATEDPRFSPVN
                     YDELQDITFEVTVLTPPEVVKVQEPTEYLRKIKVGRDGLVVKWEYGSGLLLPQVPVEY
                     GWTEEEFLENTCVKAGAPPDYWKKKSTVILRFEGIVFKEERPHGPVTRVNL"
BASE COUNT         1169 a          677 c          698 g         1121 t
ORIGIN      
        1 aacttattac gatccctttg ctgcccaaaa gatatttgat gattatcctg acatcggtat
       61 agagccaatc ttctatcctg cattttttta ctgcaaaaaa tgtttgtcat ttgcaagtga
      121 aaagaattgt ccacacggag aagaatttca agaacaactt agtggaacca aactgagaac
      181 aatgattctc gaaaaacaga gtccttcaga atttatgatt agacctgaag tgttcaaggt
      241 tcttatgaac tgggaaaatc catttgttga ttagatttca ttgaaatgac tttagtaccc
      301 aatatgcgga ttttattgtt ggtatctctc ctattcatcc ccatgttgcc agtctttgct
      361 cagcaatcga ctatgaataa atctgaacaa tatgatcttg ttgatgttcc agccagtgcc
      421 tttaatgtag taagaaacga tgctactgta ttcagactag cacatgagca cgcaactaat
      481 tggcagcttg aaattcaaaa caaattggta tatgaaaatc caaatggcac agctgtaatc
      541 aggctatatg aagatctaac aaagcaaaaa tacatagaga ttggtatggg tagtcctcct
      601 gatcacagat tttgggtatc tgtcaacact cctgaggatg gctattttct gattcatgac
      661 gacaagaccg atggatgggc tccaggtcaa gttgtaacag taactcactc aagtaatagc
      721 ggactttctg taagcgtagg tcctgatgtg aaagttgata gtcttgatat agcaggattt
      781 acaataaggg cctttaccgc ttatggcatg gattctgcaa ccgatccacc cgctgttaac
      841 tctggaaatg ttaccctgag ttttgtatca ggaaatcctt ctgcaaatcc tatcttctat
      901 atgccaacaa ttctgcttgt aggcgtaggt gcgcttatca ttgtattaat gaaaactaag
      961 aagagaactt agtcttgtaa taattacatt cattctttaa ctgacaaact ttacacatgg
     1021 gagagatggg cttgcatatg ttctggccat acattacaaa aatatcgttt attctaatcc
     1081 aatgttcttt tggaatattt tgcattagtt ttatctctgt ttcttctgga gtcctagtac
     1141 ttacaagccc taacctgtta gagatcctat gtacatgagt atcaacaggt attgccggtt
     1201 tatcaaatgc gtaaactagt acacaattag ctgtctttcg tcctacccct ggtaactcaa
     1261 gtaattcttc caaggtctcg gggactcttc cagaatattt caaatcaatt attgatgcta
     1321 cttctattat tctcttggat tttacatgat agaagcctgt tgatttgatt atcttttcaa
     1381 catcagatag ctttgcgttt gcaagtgcac gcgatgtctt atatcttgag aatagctttt
     1441 tgacaactgc tgaagtattt tcatctctag ttcttgctga aagtattgta ccgataagta
     1501 tgcttaatgg atttccatcc tcagcttcat gaagctcacg cagtgcagtc atacgtgggg
     1561 gtttgacaga gttcatagtc cttgtcattt tatttagtat cctttctatc ttgtccaaac
     1621 agtttctaaa tgaccataca agtattatat ctgttataac aaaggcgtaa tattgaattt
     1681 aacaaaagaa gaagaagctg ctcttgatgg aaagcaggga gagactctgg cacttgctta
     1741 caggactctt ttagcaatcg gggaagcaac aggtgcagat aaactaattc ctatagagtg
     1801 ggctcatctc tcaggtgtta attataatac aattggtgac gctggtgaag aatttctttc
     1861 acacatcagt aaggatgcca cattcaaggt gaaaactact gttaatccta tgggatttga
     1921 ttttgataca gtttcaaagt ataaccttga tgatgaattt atcaaaaaac aagaaaacat
     1981 taaactatca tatgaaaaga tgggcgccat tccatcattt tcttgtatac cctatgaaat
     2041 ctttcaactt cctaacaaag actctcatgt ttcctttgca gaaagtaatg ccgcaattta
     2101 tgcaaactcc atttctggcc ttaaaacaaa caaagaaggt gcatttagcg cccttgccag
     2161 cgcaattact ggcaaaagtc catactctga tctcagggaa gaaggcaata gatcaccaaa
     2221 acttaccatt agaatgaaag tagaacaaaa agacgaattg acatatggcc ttcttggtta
     2281 ctttgctgga aaggtagacg aaagttctgt ttcaatctcg ggcactaaag aactggataa
     2341 acgaagctgt aaatcattat gcgctggtat gggcacatcg ggaagatgtg gtatgttcac
     2401 attgggagaa gatggagggg aaaaaataga ttttgacaaa aaagagatgc agaaagttca
     2461 tgatgaactt aacacatcag aatctggcga tctgattaca cttggcagtc cacaacttgg
     2521 ttttgatgag atttcagatc tcagttccat gctaaaagga agatccttta caaagcgttg
     2581 catgatcttc tgtccacgtg caattcaagg acaaataaga aaaatgggat atgaaaatga
     2641 gataaaaaga gcagggggag aattactgta tgactgttgc atttgtttaa cacctcttgt
     2701 agacaagaaa gatgtggatt cggtcataac aaacagcgtg aagggagcat attatttgaa
     2761 gacctcaaat gaggtagacg ttaatctaaa aagtctaaga cagattattc aagaggagac
     2821 aaaatgacct taaaagtaat tgtacgagga aagactagag gaaccattct tgtttcaaaa
     2881 aatcccataa attttctggg aggagtcgat aaaaaaacag gaagaataag agatgaaaaa
     2941 catgatcttt ttgggaaaat acttgcaaac aagattcttg ttttccctta tggaattgga
     3001 agtagtgtgg gagcatatac gatttattct ctaaaataca acaaatgtgc acccattgca
     3061 atgatttgtc taaaggcaga tctcacgaca gcatctggtt gtgcaatctc aaacattcct
     3121 ctgcttgtag cagaaaagga agaatacgaa tctttgaaag acggtcaaga tgttttcgtt
     3181 gacgcaatag acggtaaaat actataaatt cactctggtc acaggaccat gaggtctttc
     3241 ttctttgaat actataccct caaaccgtaa aatcactgta ctttttttct tccaataatc
     3301 tggtggggca ccagctttta cacaagtatt ttccaaaaat tcttcttcag tccagccata
     3361 ttcaactgga acttggggta aaagaagccc agacccatat tcccatttta ctacaagccc
     3421 atccctacca accttaattt tccttagata ttctgttggt tcttgaactt ttactacttc
     3481 agggggagtt aatacagtta cttcaaaagt aatgtcttgc aactcatcat aatttactgg
     3541 tgaaaaacgt ggatcttctg ttgcagaaga tattgctgca tcaataaatg atagatacaa
     3601 ttttctgtca ggtgtgggaa atccaataca cccccttaga ttatcttctt tactcaaggt
     3661 cacaa
//
LOCUS       DASPUS010000175         2241 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1191207, whole genome shotgun sequence.
ACCESSION   DASPUS010000175 DASPUS010000000
VERSION     DASPUS010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1191207"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..406)
                     /gene="pgk"
                     /locus_tag="VEJ68_04125"
     CDS             complement(<1..406)
                     /gene="pgk"
                     /locus_tag="VEJ68_04125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HXX05990.1"
                     /translation="MRILTLDDFDTKGKTVFLRVDMNVPIDPSTMQIIESSRIREATE
                     SLKDLEGSKVVIASHQGRVGNKDYTGMENHAKVLEQILGHKIKYVEDVIGSEAQREIK
                     NMKDGEIILLDNLRLCAEENYEFSGLDASKTIM"
     gene            541..1200
                     /locus_tag="VEJ68_04130"
     CDS             541..1200
                     /locus_tag="VEJ68_04130"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HXX05991.1"
                     /translation="MEKWLFDIRSRTFFLLVLAFLILTYLTCAKITVTADNNFENYMQ
                     KITGNTTLDLIMQSFSELGWVLYPIFVAIILFIIKKTRRLGLTLLLALLIGTMSAAYM
                     RCYTGYEKPDLQFMGAHLPFKSGADVGVPCVIDGTFPAGYTVRTTIFAFIVSYALSRR
                     FPHGCYLVWLYPFFVSISRLYLLQEYPTTVIAGVIFGILIADIVGKKLKIELIFDKLK
                     T"
     gene            complement(1189..1500)
                     /locus_tag="VEJ68_04135"
     CDS             complement(1189..1500)
                     /locus_tag="VEJ68_04135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05992.1"
                     /translation="MDFHPSQIPISKTFQVDNEYKAPDIAAEMVKLGFGVQKGAFRVI
                     MTKDKNVAKKIGFTIMNELNLGLRKTKQERDVRYWIYSYDVDHYAMVLISSKVFELLG
                     F"
     gene            1659..>2241
                     /locus_tag="VEJ68_04140"
     CDS             1659..>2241
                     /locus_tag="VEJ68_04140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05993.1"
                     /translation="MASLAVIAKSYRAKRDAVSKLRREREKKLKEALSQMRRSNSGLL
                     SLERKKEDIVRQRDHAAQSLNQYLAQKDSIERLKIAAEERLRHEQDARDEAKQQSEYG
                     GDEEKAAGFQRLKIIDEKIEELRAEIREREGAEARIFSQIENSQKEKSKLDRKLKNQS
                     HAKPGLLERLRSGEKAEANLRPQVQSLIKREVQT"
BASE COUNT          736 a          400 c          422 g          683 t
ORIGIN      
        1 ccattatggt cttagatgca tccaatcccg aaaactcgta attttcttca gcacatagtc
       61 ttagattatc aagtaagatt atctccccgt ctttcatgtt tttaatttct ctctgggctt
      121 ctgatccgat gacatcttca acatatttta ttttgtggcc cagaatctgt tccaaaacct
      181 tggcatggtt ttccattcca gtataatcct tgtttccaac tctcccttga tgtgatgcaa
      241 ttactacttt ggaaccttcc aaatccttga gcgattctgt cgcttcacga atcctactac
      301 tttcaattat ctgcatggta gaaggatcta tggggacatt catgtcaaca cgaagaaaaa
      361 cagtcttccc tttagtatca aaatcatcaa gtgtaagaat cctcacggcg atcctttctt
      421 aggggtggtt aaaatctttt agtcagtaat aagattgaaa aataatatga ccataatggc
      481 attttaatat ggatcggttt tcggttatgt atacatgata atacaatgga ggaactttcc
      541 ttggaaaaat ggctctttga tataagaagt agaacatttt tccttcttgt actagctttt
      601 ttaattctta catatctaac ctgtgcaaaa atcacagtta cagcagataa caactttgaa
      661 aattacatgc agaaaatcac aggaaatact acattagacc ttataatgca gtccttttct
      721 gagcttggat gggtcttata tccaatattt gtagccataa ttctctttat tattaaaaag
      781 acaagacggt tggggcttac gctcctcctt gcgctcttga ttggtacaat gagtgctgcg
      841 tacatgagat gttatactgg atatgagaag ccagaccttc agtttatggg tgcacatttg
      901 ccgtttaaat cgggagcaga tgtcggggtt ccatgtgtta tagacggaac ttttccagca
      961 gggtacacag tgagaacaac gatctttgca tttattgtgt catacgcatt atcgagaaga
     1021 tttccacatg gatgttatct agtctggttg tatccatttt ttgtttcaat aagtaggctt
     1081 tacttgttac aagagtatcc cactactgta atagcaggcg tgatatttgg tatcttgatt
     1141 gctgatatag tcggaaaaaa actaaagatc gaattaatct ttgataaatt aaaaacctag
     1201 taattcaaag accttggaac ttatcaaaac catcgcataa tgatcaacgt cataactgta
     1261 gatccaatat cgtacgtcac gttcttgttt tgttttgcgt aatcctaagt tgagttcatt
     1321 catgatagta aaaccaattt tttttgctac atttttgtcc tttgtcatta tgactctaaa
     1381 agctcccttt tgtactccaa atcccagttt taccatttca gctgcgatgt ctggagcctt
     1441 atactcgtta tctacttgaa aagtttttga gattggtatc tgtgatggat gaaaatccat
     1501 gcattttcca cgatgttacc aaataaaatc tagttgatct cttctgtaaa ttggctaaaa
     1561 ttttaggaaa aaattagata atatgttaaa aatattaact cttgtgtcaa atcctgatca
     1621 taacaaaaac ttaatcgatt accacggctc tacatcccat ggcatccctt gcagtaatag
     1681 ctaaatcata tagagcaaag agagatgccg tatcaaaact gagaagagag agggaaaaga
     1741 agctaaaaga agctctttca cagatgagaa gatcaaattc aggacttttg tcacttgaaa
     1801 gaaaaaaaga agatatagtt aggcagagag atcacgctgc tcaatcattg aatcaatatt
     1861 tagctcaaaa agacagcatt gaacgtctaa agattgcggc agaggagagg ttgaggcatg
     1921 agcaagacgc gcgagatgaa gccaagcaac agagcgaata tggtggagat gaggaaaagg
     1981 ctgcaggttt ccagagactt aaaattattg atgaaaaaat tgaggagctc cgagctgaaa
     2041 ttagggaaag agaaggagca gaagcaagaa ttttcagtca aatagaaaac tcacagaagg
     2101 aaaagtcaaa acttgataga aaattaaaga atcaaagtca tgctaaacca ggattgctag
     2161 aacgactaag atcaggcgaa aaagcggagg caaacctaag accacaagtt caatcattga
     2221 taaaaagaga agtacaaact t
//
LOCUS       DASPUS010000176        12519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_93937, whole genome shotgun sequence.
ACCESSION   DASPUS010000176 DASPUS010000000
VERSION     DASPUS010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 12519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12519)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12519
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93937"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..294
                     /locus_tag="VEJ68_04145"
     CDS             <1..294
                     /locus_tag="VEJ68_04145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05994.1"
                     /translation="QQGVAKAALQANTPTVQTQPPAKTNQPVTPIQTAEQVTPVQTTQ
                     SIASDKAQLPQPPVQSIPTQNSWTMIAALVSVAAAVAVGGSLLTIKLTHKVTN"
     gene            316..1161
                     /locus_tag="VEJ68_04150"
     CDS             316..1161
                     /locus_tag="VEJ68_04150"
                     /inference="COORDINATES: protein motif:HMM:NF024258.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HXX05995.1"
                     /translation="MDLVFSDIHADISALETILGVTTSAEFTKKYGTFSRIINLGDVL
                     ERGTSPREVLARLKSLEQNYPLHSVMGNHDEGFLDNKMIGGSSIESMNAHAKLDEKDL
                     SFFKQNKDGTFGKREFIDKKNGLFCVHGGPLDPDKIMPKNARDEAWLYQRSWQRLSDE
                     EFEYFSYYGYHYTPRSAFDEAKSQVQNHIILCGHQHIEEAIMQDGDIHRIYPNLKPKR
                     EKISNHILQSREINIDPSNNYLIRLGVGGPEGYYGVGEPFPHFGIVQHDPKKVILFTV
                     LDNKT"
     gene            1158..1700
                     /locus_tag="VEJ68_04155"
     CDS             1158..1700
                     /locus_tag="VEJ68_04155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HXX05996.1"
                     /translation="MSGTETLRNDHKQIRRLEKIVIKCYTKLYAKENIPFDDIEKMTT
                     IMAEFLDAIHYSREEDAYFPCVASYDSLKDEIRAFMIEHEFSRRIANNVSKHLQKWKK
                     GEDTSEPVARFLKAYAVYLNDHITKEEKFFDKVESQVLSQEEEKMIFEEFRAVVAITT
                     KIDEMIQSLDYLEQTLWMKN"
     gene            1819..2580
                     /locus_tag="VEJ68_04160"
     CDS             1819..2580
                     /locus_tag="VEJ68_04160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008301601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6293 family protein"
                     /protein_id="HXX05997.1"
                     /translation="MQTIHTMMNIGNLRVHIAPVGFEIDRIAIAAKQMKADRVWLLMH
                     GDPAKDRAQGYMEKIRSQLKKEKIEVHVEYTDRFSLFKILKSVREIVEKEKNNDVFIN
                     CSSGSKIQAIACMMACMMFHGKTRLTPYYAEPESYASVKGEQLSTGLKTVVKLPAYEI
                     HTPKPALVQALKIIKEHDNKITKKEMARLADEKKLIVVNAKEENFQQARFASLDKNII
                     QPLQNEWKFVEIERIGRTRWIKMTPEGIGAVEFLG"
     gene            complement(2577..2795)
                     /locus_tag="VEJ68_04165"
     CDS             complement(2577..2795)
                     /locus_tag="VEJ68_04165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010191809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX05998.1"
                     /translation="MTPKKKRALKIIILLSVIWFAAALPVPFLWFNPSPQQSQQYWTY
                     MEIALIVSIPFIAMGVVWTIKPELATRS"
     gene            complement(2838..3578)
                     /locus_tag="VEJ68_04170"
     CDS             complement(2838..3578)
                     /locus_tag="VEJ68_04170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HXX05999.1"
                     /translation="MKFSNKIVIVTGGSRGIGKATAKLFVKEGANVTITARDETRLQT
                     SAKELNVIGIAGDIRKNQDVENVVNKTVEKFGKIDILVNNAGIFPQVKPLHEISEKEW
                     NDVIDINLTGQFRVTKAAIPHMMKSGGCIINVSSDAGLRSFENFEADAYSASKAALIL
                     LTKAWAIEYAKYRIRVNCVCPGVVDTDMTVPFLKTEADREITAADHPIGRIGSPEDVA
                     HAILYLASEDSSWVTGTIMAVDGGAAIK"
     gene            complement(3587..4012)
                     /locus_tag="VEJ68_04175"
     CDS             complement(3587..4012)
                     /locus_tag="VEJ68_04175"
                     /inference="COORDINATES: protein motif:HMM:NF016060.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HXX06000.1"
                     /translation="MAIGQQRSSKASLFAKHAFMYYLVGGIGVLVNLGILYALKEYLG
                     LWYLASSAIAIYVSMTTNFFLNKAWTFKDTMVKQSTLFMYFKFIAISVVGMLIQLGFN
                     YIFVNNMQMYYIVAAFISIVIASGVNFVLNRKITFGIKL"
     gene            complement(4486..5400)
                     /locus_tag="VEJ68_04180"
     CDS             complement(4486..5400)
                     /locus_tag="VEJ68_04180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TFIIB-type zinc ribbon-containing protein"
                     /protein_id="HXX06001.1"
                     /translation="MTRESFGSGGRCPRCGKGPMVTDSTTGEMFCGGCGFVMTERVEE
                     SGPEWRSFSKEEHEDRSRTGTPTSLAMHDMGLATIIGPADKDASGKPLSASMKSTIER
                     LRTWDSRSQVHEPVDRNFRQAFSELDRLKDKLALSDAVIEKTAYIYRKALDKGLVRGR
                     SIPGLVAAALYAACRDTETPRTLTDVANGINIKRKDVARCYRLLLRELDLKMPVVDPI
                     KCVARIASKAGLSEKTKRKALQILKDAAEIEISAGKDPMGLAAAALYLSCVMNGENKT
                     QKDVAQAAGVTEVTIRNRYKGLKESLKL"
     gene            6052..6684
                     /locus_tag="VEJ68_04185"
     CDS             6052..6684
                     /locus_tag="VEJ68_04185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Snf7 family protein"
                     /protein_id="HXX06002.1"
                     /translation="MTNFTNNWQKPQTPSLGERINDTLKPKGPLKPRMEHAIKRLQTQ
                     ISKMDGMITKLKQRDEKLFKRIVVATQQHDTTASKVLSKELAEVRKVTKLLGNARMAL
                     EQIELRLSTFHDLGDTVVTIMPTIGLMRNLRSSLIRFMPEADHELSGMTEMLGGLMTD
                     TFHNGDFGIDSEATSEESEKILQEAAAVAEAAVNDKLPSMPAGQASTRYI"
     gene            complement(6681..7946)
                     /locus_tag="VEJ68_04190"
     CDS             complement(6681..7946)
                     /locus_tag="VEJ68_04190"
                     /inference="COORDINATES: protein motif:HMM:NF024241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HXX06003.1"
                     /translation="MENKSKRWIWYVIPSNVTAQGLSTVIPLYVIFLGGGIGEVAIIA
                     AIQNGALTIGSIFWGKIIDRFRVRRQLLLISFFVVILCSLWMYFTSSILILYGIAPIL
                     GFFMVARNPITQLLVMESVKKNLWSWLFARTSIMSTLGMLIAMAIGAVGSLYFEVRPY
                     FLICAASSGLAMALSVTVKGGSFHLERSSIAHSIHGLTYAISHYHFVFPKIPELYDFK
                     HIIAIFRGKISNEIGIFYLGIFVFNLGSNMYFTGWTPFLVRHHFSNSAVFLNYSIQTA
                     TMLLVFFVAPRIISKLGEERATKVAFVPRVIAVIIPGISIPFMIGSLGSAIAIISSCL
                     MVVGFSIFSTSSSVIFFKSIPQGFEGKYLGVNSAITGMGVFAGSIVTGEITKSFGYSI
                     LFLTASAILICSLVLFQIYFRYRLSNKIV"
     gene            8378..8713
                     /locus_tag="VEJ68_04195"
     CDS             8378..8713
                     /locus_tag="VEJ68_04195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06004.1"
                     /translation="MIEEGIYQLIYESNLDSKLEQILIGLMKDNPSPKIETMIKKFLL
                     YIQHSTENFWTMYYRAKTYQEKLDCYYQFSKNQCLATEVLIRDLDSLSSEEELKESLG
                     TILKEGFTF"
     gene            complement(8710..9333)
                     /locus_tag="VEJ68_04200"
     CDS             complement(8710..9333)
                     /locus_tag="VEJ68_04200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HXX06005.1"
                     /translation="MFEKFRKKKDEFKPASTKKEEDVFTTDTTQYQPQELRSEETAGI
                     VEQQTPRQEEFREQPKPRPPEQVKIPEHIQQATMSTSGEDIGIRTLMDKRTKLEEAID
                     YVGLMIKNLKDKRTKLEKNIEDESVDIKNLKEKLIKVGQYIDEERQGIKTLQQKRGEV
                     EREADDVATIIGNLREKLLSIDHVVNEEGTKIEKFKETRSSKESTFT"
     gene            9558..9875
                     /locus_tag="VEJ68_04205"
     CDS             9558..9875
                     /locus_tag="VEJ68_04205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6659 family protein"
                     /protein_id="HXX06006.1"
                     /translation="MMRFAAIIDLKGNISEAIMKEGKTSLKSQKEEEHFCKQVAIRRK
                     IRKQFDKSLGPVNYVHIERQKVTQIVIYPKHKTVYVTLEPKMDIRRKLEIIEQIKKKT
                     WNL"
     gene            complement(9909..10256)
                     /locus_tag="VEJ68_04210"
     CDS             complement(9909..10256)
                     /locus_tag="VEJ68_04210"
                     /inference="COORDINATES: protein motif:HMM:NF014047.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAM domain-containing protein"
                     /protein_id="HXX06007.1"
                     /translation="MSFNDSGFGDSPNQGYSGNRGYGGGRRFGGGGRRFGGGRRFDDN
                     RPKPVETGKEYDVSITEISRKGDGIARVEGFVIFVKGGQVGQNAKVKITQVGGRFATA
                     DVVGEGTPQAASE"
     gene            10455..10742
                     /locus_tag="VEJ68_04215"
     CDS             10455..10742
                     /locus_tag="VEJ68_04215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016940139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HXX06008.1"
                     /translation="MSKQQYRSEMGIIADILGVTMDGGVQGVIISAISRRANLSHYAV
                     LEKCQKLIDAGLVESLKDERNRLFKITEKGIKFFQEFQRFQGVVQGLNLRY"
     gene            10744..11937
                     /locus_tag="VEJ68_04220"
     CDS             10744..11937
                     /locus_tag="VEJ68_04220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06009.1"
                     /translation="MYQKALVVPEVPQEGMLFVRFTYILTSMIKAPIVAVCFFLIALS
                     SSVQYVLSSPKVLEFSIYPDGTTHVFYQTDVDSQSPDFTLDLFGNTTNNLVTQDENGT
                     LLSSTVNTNDAVIETLGASTIKVNYDTPDLVSKSGKTWTFHVDSPVDFSVLLPQNTVI
                     VGISSPPSNLQIIDNQSLISLPSGTADISYIFGVLGTSQTATLAIQKAHDFITTVNSE
                     GISTPLASTKLGDANTAFNQGKFSDAESLANDAKNLAIEEQQTALSTPKGSTENNNIP
                     ILIAAGAAAAGTTAFIIIRKSRGTKSTTIPQIPQTNYIPSDKETIFRLRPELRQEDKD
                     MVAFISEKGGRVFESELRKKFLLPRTTMWRAVKRLEREGIVEIEKVEQQNLIKLLKIE
                     GESQE"
     gene            11934..>12519
                     /locus_tag="VEJ68_04225"
     CDS             11934..>12519
                     /locus_tag="VEJ68_04225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06010.1"
                     /translation="MRIFSFILLALVGTMVLGLPLQSYADPQLDIFLNIATQARDNLG
                     ATISQTNNVSNEINQLYKQGSDETDQLAKAVNQQDTTAAKQHFLAAMKFFKQTNDKIN
                     SLNATTSNDQQKAEIDQLRGEITRLDNIESLLKNIAATNNIEMNFTKFDKLIQTAQQD
                     LDSGNVSDAITLIKNANDSLVETQHSLTTIAQERA"
BASE COUNT         4039 a         2535 c         2292 g         3653 t
ORIGIN      
        1 caacaaggtg tagcgaaggc agccctgcaa gcaaacactc ctacggtaca aacacaacca
       61 ccagcaaaga ctaaccagcc ggtaactcct atccagactg cagagcaagt gacacctgta
      121 cagacgacgc aatcaatcgc gtcagataaa gcgcaactac cacaaccccc tgtacagtcc
      181 attcccacgc agaattcttg gacaatgatt gcagcgttgg tatcagttgc agctgctgtg
      241 gcagtaggag gaagcctgct tacaatcaag cttacacata aagttacaaa ttaggtacat
      301 ccccacaaaa aacccatgga cttggtattt tctgatatcc atgcagacat ctccgcactt
      361 gagaccatac ttggagtaac aactagtgcc gagtttacaa aaaagtatgg aaccttttcc
      421 agaataataa atcttggaga tgtactggaa cgagggacca gtccaagaga ggtccttgcc
      481 aggttaaagt cactagagca gaactatcca ttacactctg tcatgggaaa ccacgatgaa
      541 ggatttcttg acaacaagat gattggtgga agttctatcg agtccatgaa tgcacacgca
      601 aaactagacg agaaagatct ctcatttttt aagcaaaata aagacggcac atttggaaaa
      661 agggagttta tcgataaaaa aaacggattg ttctgtgtcc atggcggacc gcttgaccca
      721 gataaaatca tgccaaaaaa tgcaagagac gaggcatggc tctaccagag gtcttggcag
      781 agactctcag atgaagagtt tgagtacttt agttattacg gatatcatta tacaccaagg
      841 tccgcatttg atgaggcaaa aagtcaggtg caaaaccaca tcatactctg tggacaccag
      901 cacatcgaag aggccataat gcaggatggc gatatccaca gaatctatcc aaacttaaaa
      961 ccaaaaagag aaaagatctc aaaccacata cttcaaagca gagagataaa cattgatcct
     1021 tcaaacaatt acctgatacg cctcggcgtt ggaggacctg aaggatatta cggagtagga
     1081 gaaccgtttc cgcattttgg aattgttcaa catgatccaa aaaaggttat cttgtttacg
     1141 gtactagata acaaaacatg agcggaacag agacacttcg aaatgatcac aaacagattc
     1201 gaaggctaga aaaaattgtc ataaagtgct acaccaaact ttatgcaaaa gagaatatcc
     1261 catttgatga tatcgaaaag atgacaacaa tcatggcaga gtttttggat gcaatacact
     1321 attccagaga agaagatgca tactttccat gtgttgcaag ctatgattct ctcaaggatg
     1381 agatccgtgc atttatgata gagcacgagt tttcacgaag aattgcaaac aacgtttcaa
     1441 agcatctgca aaaatggaag aaaggcgaag ataccagcga gcctgttgca aggtttctca
     1501 aagcttacgc tgtttaccta aatgatcaca tcacaaaaga agaaaagttc tttgataaag
     1561 tcgagtcaca ggttctgtca caagaagaag agaagatgat ctttgaagag tttcgtgcag
     1621 tagttgcaat aactaccaag atagatgaaa tgatacaatc acttgattat ctagagcaga
     1681 ctttatggat gaaaaattag gattcttcaa agactgattt tactttggga taaaacaaga
     1741 ctgggcattc ttcgagtttg tatttttgct gcatgggttt catacggatg cacaattatt
     1801 atatatcatc accatagtat gcaaaccata cataccatga tgaacattgg taacttgaga
     1861 gtgcacattg caccggtagg ctttgagata gatagaattg cgattgctgc aaaacagatg
     1921 aaggcggaca gggtctggct cctaatgcat ggcgaccctg caaaggacag ggcacagggg
     1981 tacatggaaa agattcggtc ccaactaaaa aaagaaaaga tcgaagtaca tgtagaatat
     2041 acagataggt ttagtctgtt taagatacta aaatcagtaa gggagattgt agaaaaagaa
     2101 aaaaacaacg atgttttcat taactgttcc tctggttcca agatccaagc tatcgcatgc
     2161 atgatggcat gcatgatgtt tcatggaaag acaaggctta ctccatacta tgccgagccg
     2221 gaaagttatg caagcgtcaa gggcgagcag ctatcaacag gactcaaaac agttgtaaag
     2281 ctacctgcgt atgaaatcca tactccaaaa cccgcacttg tacaagctct gaaaataata
     2341 aaagaacatg acaacaagat aacaaaaaaa gagatggcaa gacttgcaga cgaaaaaaaa
     2401 ctgattgtag taaacgcaaa agaagaaaac tttcagcagg caagatttgc atcccttgac
     2461 aagaacataa ttcaaccgtt gcaaaatgaa tggaagtttg tggagatcga aagaataggc
     2521 agaactcgct ggattaaaat gacgccggaa ggaatcggtg cagtagagtt tcttggctag
     2581 cttcttgttg caagttctgg cttgattgtc cagacaactc ccattgctat gaagggaata
     2641 gagactatca acgcaatctc catgtatgtc cagtattgtt gtgattgctg ggggctaggg
     2701 ttaaaccaca aaaatggtac aggcaaggct gcagcaaacc agattaccga aagcaaaatg
     2761 ataattttca gcgctctctt cttttttgga gtcacatcat aactttgggc ttgggttcta
     2821 ttaatttgat atgctgatta cttgatagcc gcgccgccat ctactgccat gattgtacca
     2881 gtaacccacg aagagtcttc tgaagcaagg taaagtattg catgtgcaac atcttcagga
     2941 ctgcctatcc tgcctattgg gtggtcagca gcagtaattt ccctatccgc ctctgtcttg
     3001 agaaacggca ctgtcatgtc tgtatccacc acgcctggac atacacaatt tacacgtatc
     3061 ctgtacttag cgtattcaat ggcccatgcc tttgtgagca gtatcaaagc agcttttgag
     3121 gcagaatatg catctgcctc aaagttctca aatgatctta atccagcatc agatgagaca
     3181 ttgattatgc agccgccact tttcatcata tgaggaattg cagccttggt aacacgaaac
     3241 tgtcctgtaa gatttatgtc aattacgtca ttccattctt tttcagaaat ttcatgcaaa
     3301 ggtttgactt gaggaaatat tcccgcatta tttaccaaaa tgtctatctt gccaaatttt
     3361 tcaacagttt tatttaccac attttcaaca tcctgatttt ttctaatgtc tcctgcaatg
     3421 ccaattacat ttagttcctt tgcagaagtt tgcagtcttg tttcatctct tgcggtaatt
     3481 gtgacatttg caccttcttt tacaaatagt ttcgcagttg ctttaccaat tcccctgcta
     3541 ccgcctgtta caattacaat tttgttagaa aacttcatac ataattttag agttttatgc
     3601 caaaggttat ctttctgttt agcacaaaat ttacacctga tgcaattact atggaaataa
     3661 acgcagctac gatataatac atctgcatat tatttacaaa aatatagttg aacccaagct
     3721 gaatcagcat tccaacaaca cttattgcta taaacttgaa gtacatgaaa agagtagatt
     3781 gttttaccat tgtatctttg aaggtccaag ctttgtttaa gaaaaaattt gtagtcatag
     3841 aaacatagat tgcaatcgca gaagaagcaa gataccacaa tccaagatat tcctttaatg
     3901 cataaagaat tcccagatta acaagaacac ctataccgcc aaccaaatag tacatgaatg
     3961 catgttttgc aaaaagtgat gccttgcttg atctctgttg gccaattgcc atcagctttt
     4021 caatctatag tgagttaata aatcataaag tcttttttta attcatcatc ggatctaatt
     4081 atgcagataa tcagattgtt gtaaattgtt tggatttcaa gtaatgtgat tgcacattat
     4141 ctattgctat gataaagaat ttcaataatt ctgatgttgt ttatgaaaaa atacatataa
     4201 aatgataaat accatgatgt aatatactaa accatgcaga aggatgtaaa atctactgct
     4261 tcatgagcgt ggcttcgtag accttcaaat agaatcccac tgtggtggga ttatgagagg
     4321 caatctctgc atggctgcga attaaggcca cgccctcatt ctttcatatc aagatgtgaa
     4381 tctgctcaaa atttcataat gacatttaca aagttttttc taattttaaa atatacaaaa
     4441 taagacaaga caaataaaaa tcaaaattaa tttttagaaa aaaatttaga gcttaaggga
     4501 ctcttttaat cccttgtatc tatttcggat tgttacttcg gttactccag cagcttgtgc
     4561 aacatctttt tgcgtcttgt tctctccatt cattacacag gaaagataca atgcagcagc
     4621 tgcaagtccc ataggatctt tgccagcaga aatttcaatc tctgctgcat cttttagaat
     4681 ttgcagagcc tttcgttttg ttttctcgct taatcctgct ttgcttgcaa tccttgctac
     4741 acatttgata ggatctacaa ctggcatctt cagatccaat tcccttagaa gtagcctata
     4801 gcatcgtgca acatcttttc gtttgatgtt gatgccattt gcaacatcag tcaacgttct
     4861 tggggtctct gtatctcgac atgctgcata tagtgctgct gcaacaagtc caggaattga
     4921 tcttcctcta acaagacctt tgtcaagtgc ctttctatag atgtatgctg ttttttctat
     4981 tactgcatca gataatgcaa gcttgtcctt tagtctgtca agctcactga aggcttgtct
     5041 aaagtttctg tctactggct catggacttg acttctactg tcccaagttc tgagtcgttc
     5101 aatggtgctt ttcattgatg cagacaatgg ttttccagat gcatccttgt cggcaggacc
     5161 gattattgtt gcaagtccca tatcatgcat agcaagtgat gtaggagttc cagttctact
     5221 tcggtcttcg tgttcttctt tggaaaatga tctccattca ggaccagatt cctcaacacg
     5281 ttctgtcata acaaatccgc aaccaccaca gaacatttct ccggtggtgc tatcggttac
     5341 cattggacct tttccacaac gaggacaacg tccaccagaa ccgaaagatt cgcgcgtcat
     5401 attatatctt ataagatttt cggtttacac aaataaaaag ctttaactat aagtgttttt
     5461 ccaattttga ttacaaaatg cctaataaat ttgtaaaatt tataatttct atttaacttt
     5521 attataataa ctcgaaatag cttgttctga taatgtgttc atctattttt attttcgtta
     5581 agatcttctc ttgtttcttt tttggaaata tctcatcgca taatttttta tttttctaaa
     5641 acgattttct tttttaaaaa taaaattttc gtcttgttgc aacaaatttt tttcttaaaa
     5701 ctgctccaag caaaacctta aatacgtttc ctttgatcga catgcatcaa ataaaatgga
     5761 aaaatgtcca ctttgttgtg aatctcaacc gtcaagcagt gcgttgtcga ttcacctaaa
     5821 gaaaatccat ccgcaaagaa acattgcgtt tcaagtaacg caataaatct tcgcagttgg
     5881 aagggaacgt aggaactatc caaaatagtt tatccacgaa attttgattt tttaatagaa
     5941 tcaagcgata agctacttac tctcatgatt gcatttttgt cagctaaatt tagtatactg
     6001 tgaaccacat ttcacacctg aaattaataa tgaattttat cagtcgtatc catgacaaac
     6061 ttcactaata actggcaaaa gccacaaaca ccaagccttg gtgagagaat aaatgataca
     6121 ctaaagccaa aaggtcctct gaagccaaga atggaacatg caatcaaaag acttcagacc
     6181 caaatttcaa aaatggatgg aatgattaca aaattaaaac aaagagatga aaaattattc
     6241 aaaagaattg ttgttgctac acaacagcat gatactactg caagtaaagt tttatcaaaa
     6301 gaactagcag aggttcgaaa agttaccaaa cttctcggaa acgctagaat ggcactagaa
     6361 caaattgaac tcagacttag taccttccac gatctgggtg acaccgtagt cacaatcatg
     6421 ccaacaatag gcttgatgag gaatctaagg tcttcactga taagattcat gccagaagca
     6481 gaccatgaat tgtctggaat gacagagatg ctcggtggtt tgatgactga caccttccac
     6541 aacggagact ttggaatcga ctctgaagca acatcagaag agtctgaaaa gatcctccaa
     6601 gaagcagcag cagttgcaga ggcagcagtc aacgacaaac tgccttcaat gcctgcaggc
     6661 caagcttcca ctcgctacat ctagactatc ttatttgata gtctgtagcg gaaatatatc
     6721 tggaacaaaa caagtgagca gatcaatatt gcagaagctg taagaaatag tatactgtat
     6781 ccaaatgact tggttatctc tcctgttact atggaacctg caaaaacccc cattccagta
     6841 attgcgctat ttacccccaa gtatttgccc tcaaatccct gtggtatgct tttaaaaaaa
     6901 atcacagaac tagaggtact aaaaatagaa aagccaacca ccatcaaaca tgaggaaatt
     6961 attgctatgg cagaaccaag acttcctatc ataaaaggaa ttgaaatccc aggaattatt
     7021 accgcaataa ctctaggtac aaatgcaact ttagttgcac gctcttcgcc taattttgat
     7081 attatccttg gcgccacaaa aaagacaagc aacatggttg cagtttgaat tgaataattc
     7141 aaaaagacag cagagtttga aaagtgatga cgcaccagaa atggagtcca gcctgtaaag
     7201 tacatgttac ttcctaaatt gaagacgaag atgccaagat agaagattcc tatctcgttg
     7261 cttatttttc cccgaaatat ggcaataata tgcttgaaat cataaagttc agggatttta
     7321 ggaaatacaa aatgatagtg actgatggcg taagtcagac catgaataga atgtgctata
     7381 ctgcttcgct ccaaatgaaa acttccacct ttgactgtaa cacttaatgc cattgccagg
     7441 ccactagatg cggcacaaat caaaaaatac ggtcttacct caaaatacag actcccaact
     7501 gctcctattg ccattgcaat caacatccca agtgtactca taatggaagt tcttgcaaag
     7561 agccaactcc agagattctt ctttactgat tccattacaa ggagctgtgt tattggattt
     7621 cttgcaacca taaaaaatcc tagtattggt gctatgccat aaagtatcaa tattgaactt
     7681 gtaaaataca tccagagact gcaaagaata actacaaaaa acgaaatgag cagtaattgt
     7741 cttcttacac ggaatctatc gattatcttt ccccaaaaga tcgagcctat ggtcagcgcc
     7801 ccattttgaa tagctgcaat tattgcaacc tctcctattc cccctcccaa aaaaattaca
     7861 tacagaggaa ttacagtgct taatccttgt gctgttacat tagatggaat tacataccag
     7921 atccatctct ttgatttatt ttccattctt ttagttaatg acggaataga cggattattg
     7981 tataatctat ttgaataatt tacatagttt tgtctatctt cgtttaattg gaaaaaacta
     8041 gatcatgcag gagcgtggga ttagcacgcc atgcctgaat gtgaacatcc agtgcagaga
     8101 tgaccattgt catcctttcc tcaggattgc tcccgtggta gcatttacgg agggattttg
     8161 gccgaccgct ttgtgcattt ctgctgcatg attcctgtct tgggaggata tcctttgaca
     8221 gggacaatta atacgtgact aaattattta aggattgtga gtattttcat ttttgaaatt
     8281 ttaaattttt cagacaaata gatttgtttc aatttattta gatttttttt gaaatttatt
     8341 gattaaagct tttatgatac ggtcgcgtaa cgcgtccgtg attgaagagg gcatttacca
     8401 actaatctat gaatctaatc tggattccaa gttggaacaa attctaatcg gacttatgaa
     8461 agacaatcct tctccaaaga ttgaaacaat gataaaaaaa ttcttgttat acattcaaca
     8521 ctcgactgaa aatttctgga ccatgtacta cagggcaaaa acatatcaag aaaaattaga
     8581 ctgttattat cagttctcaa agaaccaatg tcttgcaact gaggtgctaa ttagagacct
     8641 tgactcacta tcatctgaag aggagttaaa ggaaagcctc ggaacaatct tgaaagaagg
     8701 ttttactttc taggtaaatg tagactcttt gcttgatcgc gtctctttga atttttctat
     8761 cttagtacct tcttcgttta ccacatgatc tatactcaat aatttctcac gcaaattgcc
     8821 tattatcgtt gcaacatcat ctgcctctct ttccacctcg cctcgttttt gctgtagtgt
     8881 ctttataccc tgcctttctt cgtcgatata ttgacctacc ttgatcaatt tttctttgag
     8941 atttttaata tctactgact cgtcctcgat gtttttttct aactttgttc gcttgtcttt
     9001 tagattcttt atcatcaagc ctacataatc aatggcttct tcgagcttgg ttcgcttgtc
     9061 catcagtgtt cttattccga tgtcttctcc cgaagtgctc atcgtagctt gttggatatg
     9121 ttcgggtatt tttacttgtt ctggaggtct aggcttgggc tgttctctga actcctcttg
     9181 tctgggagtc tgctgttcaa cgatacctgc tgtttcctct gatctcaatt cttgtggttg
     9241 atactgtgta gtatctgttg taaacacatc ttcttccttt ttagtagatg ctggtttaaa
     9301 ttcgtccttt ttctttcgga acttttcaaa catttgctta tgagtactgt aatttgcaat
     9361 atataaaaag ttagtagatg gaagaattgg tcgaattatt agtcagattt tcagggcaag
     9421 tctttgaatc tgcgatcagg catgtcaggt accaagatat atttagagaa ttgaaaaatt
     9481 gacttcgtta gttgaaaaag gagaaccaca aagtacacct cattcctata gtagaagaca
     9541 tcttggcgtt ggatcctatg atgagatttg ccgcaataat tgacctcaag ggaaacatat
     9601 ctgaggctat aatgaaagaa ggcaaaacat ctctcaaatc acaaaaagaa gaagaacact
     9661 tttgcaaaca agtagctatt agaagaaaga ttcgcaagca atttgataag agtttaggtc
     9721 cagtcaatta tgtccatata gaacgtcaga aggtcacgca gatagttatc tatcctaagc
     9781 ataaaacggt atacgtcacc ttggagccaa agatggacat aagaagaaag ctggaaatta
     9841 ttgaacagat aaaaaagaaa acttggaatt tataaaaaat taaaaaaacg cttacaagag
     9901 aatcagatct attctgacgc tgcctgtggg gttccttcgc ctactacatc agcagtagca
     9961 aagcgtccgc ctacttgcgt tatctttact tttgcgttct ggcctacttg tcctcccttg
    10021 acgaatataa caaaaccttc tactcttgcg ataccgtctc cttttctact gatctcagtt
    10081 atagatacgt cgtattcctt gccggtttct actggttttg gtctgttgtc atcaaatctt
    10141 cgtccgccgc cgaaacgtcg tccgcctcct ccgaatcttc gacctccacc gtaacctcta
    10201 ttaccgctat atccttggtt tggactgtca ccaaaacctg aatcgttaaa gctcaccgtt
    10261 gcacctcctt ttgcagtaac aatacagatg ccctataaaa tctgttcaga ttattggcaa
    10321 aactacaact cgcccccgct tcgtaaatcc aatactttgg agccatttca ggtactgaaa
    10381 cacccgttcc gctaggcgtt ccgctttggc gtttcatact gtccctcata aaagatgcat
    10441 cctatagagt accaatgtca aaacaacaat acaggtctga aatgggaatc attgcagata
    10501 ttctgggtgt aaccatggat ggtggcgttc aaggagtaat catatctgct atttccagga
    10561 gagcaaatct ctcgcactat gcagtgctag agaagtgcca aaaactgata gatgcaggtc
    10621 tggttgaatc attaaaagac gagagaaaca gactatttaa aatcacagag aaaggcatca
    10681 aattcttcca ggaattccaa cgatttcagg gcgtagtaca gggactgaac ctgaggtact
    10741 agaatgtatc aaaaagctct ggttgtccca gaagtaccac aagaaggaat gctttttgta
    10801 aggtttacct atatcctgac atctatgatt aaggcaccca tagttgctgt ttgttttttc
    10861 ctaatcgcac tttcctcatc tgtccagtat gtactcagtt caccaaaagt tctggaattt
    10921 agtatatatc ctgatggaac cacacatgtt ttttatcaaa ctgatgttga ttcacaatct
    10981 cctgatttta ctctagatct ttttgggaac accaccaata atctggtaac gcaagatgag
    11041 aatggcacat tgctttcaag tacagtaaat acaaacgatg ctgtaattga aactctgggt
    11101 gcatccacaa ttaaagtaaa ttatgatacc cctgatcttg tatcaaaaag tggaaagacc
    11161 tggacatttc atgtagattc tcctgttgat ttctctgtac ttcttccaca aaatactgtg
    11221 attgtaggga ttagttcacc accatcaaat ctccaaatta ttgataatca gtctcttatc
    11281 tctctaccaa gtgggaccgc agatattagc tatatttttg gtgttttggg aactagtcag
    11341 actgccacat tggcaattca gaaagcacat gattttataa cgacggttaa ttctgaggga
    11401 atatcaactc ctttggcttc tacgaaactt ggtgatgcaa atactgcatt caatcaagga
    11461 aaattttctg atgcagaatc cttggccaat gatgccaaaa acttggcaat tgaggaacaa
    11521 caaacagctc tgtccacacc aaaaggctcc actgagaaca ataacattcc aattttaatt
    11581 gctgcaggag ctgctgcagc aggcactaca gcatttatca tcattagaaa aagcaggggt
    11641 actaaatcca caactattcc gcagattcca cagactaact acataccgtc agataaagaa
    11701 accatattca ggcttaggcc agaattacgc caagaagata aggatatggt tgcatttatc
    11761 tcagaaaaag gtggaagagt tttcgagagc gaacttcgca agaaattcct tctaccacgt
    11821 acaactatgt ggcgtgcagt gaagcggcta gaaagagaag gcatagttga aattgaaaaa
    11881 gtagaacaac aaaatcttat aaagttgcta aagatcgagg gagagagcca agaatgagga
    11941 tcttttcatt tatcttatta gcattggtag gaaccatggt attgggatta cctttgcaat
    12001 cgtatgcaga tcctcaactt gatatctttc taaatatcgc cacgcaagct agagataatc
    12061 tcggtgccac tatatcacaa actaacaacg tatcaaacga aattaatcaa ctatacaaac
    12121 aagggtccga tgaaaccgat cagctcgcaa aagcagtcaa tcaacaagat acaactgctg
    12181 ccaaacaaca ctttcttgct gcaatgaagt ttttcaagca aacaaatgac aaaataaatt
    12241 ctcttaacgc aacaacatca aatgaccagc aaaaagcaga aatcgatcag ttaagaggtg
    12301 aaataacccg actcgataat atcgaaagcc tgcttaagaa tatagcagct acaaataaca
    12361 ttgaaatgaa cttcaccaaa tttgacaagt tgattcagac tgcacagcaa gatctagatt
    12421 caggtaatgt tagtgatgca ataacattga ttaaaaatgc taatgactct ctagttgaaa
    12481 cacaacactc acttacaaca attgcccaag aaagagcag
//
LOCUS       DASPUS010000177         2816 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_2017564, whole genome shotgun sequence.
ACCESSION   DASPUS010000177 DASPUS010000000
VERSION     DASPUS010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2816)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2816
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2017564"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..748)
                     /locus_tag="VEJ68_04230"
     CDS             complement(<1..748)
                     /locus_tag="VEJ68_04230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase lyase subunit
                     PdxS"
                     /protein_id="HXX06011.1"
                     /translation="MIPLSGDINNAKGIIREKVGPYDTQRGTSTLKRGLAHMLKNGVV
                     MDVTTVEQAQIAEDAGAVAVMVLDKLPSDVRKAGGVARTASIRIIEEIMDSVTIPVMA
                     KCRIGHVYEARVLEEANVDMIDESEVLTPADEFHHIWKWDFTTPFVNGARNLGEALRR
                     IEEGAAMIRTKGEPGTGNVAEAVIHIKNVNTELRKIKSIYDAGDEQDLISIARELKVS
                     YSIVEETASLGRLPVVNFAAGGISTPADAAY"
     gene            complement(774..1307)
                     /locus_tag="VEJ68_04235"
     CDS             complement(774..1307)
                     /locus_tag="VEJ68_04235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06012.1"
                     /translation="MVRPMILILSAIPILAAIFIVVPPLLRPEIPSAAVNSDDVITLE
                     YTKEHLKKISFGLTQSIGADTAEVLMIQNDGSATYGLTKDGNSQPDIKYQLNSDELKK
                     LKSLIKETGFMDIPDTDFQVKPDLNEYEKYGLQVTLNAQTVNLHWADENASQQFIPPI
                     ITQVQSNLDGVIGEIIK"
     gene            1739..2371
                     /locus_tag="VEJ68_04240"
     CDS             1739..2371
                     /locus_tag="VEJ68_04240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06013.1"
                     /translation="MSRGNFPTFGASKTGTYVSTLKNYNLPPFILERIAVDCKSDLIK
                     KGRIEERLQSMNDSALELLHKVFVDCAEDSDGAYANYRFFAYISSMFHKCEILLNEKI
                     PGSSGKIHKVPIAVKNNGMYIAVGQNKSNGGPISKREAIKFYDMVDDIKKGEHGNQLT
                     EGVFGSSVGFDGEALVTLEKLSKARKKDPQNKIDFKTASFENRIYSVTKC"
     gene            2635..>2816
                     /locus_tag="VEJ68_04245"
     CDS             2635..>2816
                     /locus_tag="VEJ68_04245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06014.1"
                     /translation="MVEESFGWFYYKKGKYFGVTKNHYLPEGKLQTLCGNHIVNPGDR
                     SYLRFTNINQLFKHKL"
BASE COUNT          847 a          513 c          525 g          931 t
ORIGIN      
        1 gatatgcagc atctgcaggt gttgatattc cacctgctgc aaagtttaca actggtaatc
       61 ttccaagact tgctgtttct tctacaattg aatatgatac cttcaattct cttgcaatag
      121 agatcaagtc ttgctcatct cctgcatcgt aaattgattt tattttgcga agttcggtat
      181 tgacattttt aatatgaatt actgcctcag ctacatttcc agttcctggc tctccttttg
      241 ttcttatcat tgcagcacct tcctcaattc ttcgaagtgc ttcgcccagg tttcttgctc
      301 cattaacaaa tggagtagtg aaatcccatt tccatatgtg atgaaattca tctgctggtg
      361 taagtacttc agattcatca atcatgtcca cgtttgcttc ttctaatact cgagcttcgt
      421 aaacatgtcc aattctgcat tttgccataa caggtattgt aacagaatcc attatctctt
      481 caataattct aatactagca gttcttgcaa caccaccagc ttttcttaca tcagatggaa
      541 gtttatctaa gaccattact gctactgcac ctgcatcttc tgcgatttga gcttgttcaa
      601 cagttgtaac atccattacc acgccatttt ttagcatatg ggccaatcct cgttttagag
      661 tagaggtgcc gcgttgagta tcatacggtc ctactttctc tcggattatt ccttttgcat
      721 tattaatatc accagaaagt ggaatcatac tgtttgatcg cttcgagatc tatttatttt
      781 attatttctc cgattacgcc atcaagattt gactgtactt gtgttataat aggagggatg
      841 aattgttgac tagcgttttc gtcagcccag tgaagattaa ctgtttgtgc attcaaggta
      901 acctgtaatc catatttttc atattcatta agatcaggct tgacttgaaa gtcagtatca
      961 ggtatatcca taaagccggt ctcttttatg agagacttca atttttttaa ttcatcggaa
     1021 tttaattgat atttaatgtc aggctgagaa ttgccatcct ttgtaagacc ataggtagca
     1081 gagccgtcat tttgtatcat taaaacttct gcggtatctg ctccaatgct ttgtgtgaga
     1141 ccaaacgaga tctttttcaa atgttcttta gtatactcta acgtaattac atcatcggaa
     1201 tttactgcag cgctcggaat ttctggtcta agtaatggag ggacaacgat gaatattgct
     1261 gcaagtattg gaatggcgct taagatcagt atcattggac gaaccatatc tattcagatg
     1321 gttttccttc aaaattaatg taggtggagt tcgtaagtga atgggtttta tcaaaaatca
     1381 atgtttatca ccatttgtaa ttgaattcca atggctgcaa taaatcttca gaaactaagt
     1441 aaattaaaat tcaagtgttt tcatgttcat tatgtggggt cgtagcctag cctggcatgg
     1501 cgacaggata gatcacatga tcaccgctaa gggctccagt ggttaactag cttcactgac
     1561 gaaaggatga tgtatagttg gagctgtagt gacccgtgtg tcgccggttc aactccggtc
     1621 ggccccacca ttcagatctc cttttagcga acagttataa ggaaaaagca acgaatctat
     1681 aattggtcaa gttggggatt catttcaatt attatataat taacaaagga gattcaaaat
     1741 gagtcgtggt aattttccaa cttttggagc ttcgaagact gggacgtatg tttctaccct
     1801 gaaaaattac aacttgcctc ctttcattct agaaaggata gcagtagact gcaaatctga
     1861 tcttataaaa aaaggcagga ttgaagaaag gctgcaaagc atgaatgatt cagctcttga
     1921 acttcttcac aaagtgtttg ttgattgtgc ggaagattct gacggggcat atgctaatta
     1981 tcgctttttt gcatatattt caagcatgtt ccacaagtgt gaaattttac taaatgaaaa
     2041 gattccaggt tcttctggca aaattcacaa agttccaatt gctgtcaaaa acaacggcat
     2101 gtatatcgct gttggtcaaa acaaatcaaa tggcggtccg atatcaaaga gagaggccat
     2161 aaaattctac gatatggtag atgacataaa aaaaggcgag catggaaatc aactcactga
     2221 gggagtcttt ggctcatcag taggatttga tggagaagca cttgtcacct tagaaaaatt
     2281 aagtaaagct cgtaaaaaag atcctcaaaa taaaatagac tttaaaacag caagttttga
     2341 aaatagaata tattctgtta ccaagtgtta gtgcttcttt ttagcaggac agaattttgt
     2401 gtgaacttgt ttctccactg ttaatgtagt ctcgttttca tgaaataatt tttgaccaca
     2461 atctgggcaa atgaattctg gcatgcaaaa atttcaaagg cacttactta tagtctttta
     2521 gagtcacaaa aatgtactgt tttatccatg agatgaaatt agtagaaaag ctacgcaact
     2581 tatttgaacc atgaatagat atttgctaca atattggaca catgtaattc agaagtggtt
     2641 gaggaatctt ttggatggtt ttactataaa aaaggcaaat attttggagt tactaaaaat
     2701 cactatcttc cagaaggaaa attacagaca ttgtgtggaa atcacattgt aaatcctggt
     2761 gatagatcat accttcgttt tacaaatatt aatcagcttt tcaaacacaa gttatg
//
LOCUS       DASPUS010000178         2577 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1192204, whole genome shotgun sequence.
ACCESSION   DASPUS010000178 DASPUS010000000
VERSION     DASPUS010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2577)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1192204"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..562
                     /locus_tag="VEJ68_04250"
     CDS             <1..562
                     /locus_tag="VEJ68_04250"
                     /inference="COORDINATES: protein motif:HMM:NF015665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UDP binding domain-containing protein"
                     /protein_id="HXX06015.1"
                     /translation="HYPGAGVGGPCLPVNSYQILNSARSMENNGLLKIIRVARETNES
                     MPYHVVELLADALNEVGKSVKGSTVALLGVSYKPNVKDIQLAPAESIIRRLDQLQSIV
                     KIYDPYYQSTYVYSHKTEKSLIDAIANADAVIIVTAHNEFCNVDPSLFVSKMRTPVII
                     DARGIIDVHAAKKAGLVFRGIGRGGV"
     gene            549..1760
                     /locus_tag="VEJ68_04255"
     CDS             549..1760
                     /locus_tag="VEJ68_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004066 - asparagine synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006529 - asparagine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase-related protein"
                     /protein_id="HXX06016.1"
                     /translation="MGGYSQITNASLKSILTLRYDYTIQSSKLPKLEWRDFFEKHSTN
                     VIEMVENSIINTLKKQIGQQKKVAVALSGGVDSALMLLLLRKTFPKINIVSISVVFAN
                     SIDESKQAKLIAEKFSSEHKVLFVENYLRDLPKAISIIKLPFWDLHWYTIVKETKDVA
                     KTLVSGDGGDELFGGYTFRYQKFLSLINHKSSVLEKVQAYLQCHERDWVPNQEKVFGK
                     KIPFSWDEIYSTLYPFFDNPLPPLGQVFLADFNGKLLHNWLPLNSEFHQYFGVMQVTP
                     ILTSDLISYATHIKYDLKYSKQDNVGKLVLRNILSKYNSDSVVSATKQGFSVDTTSLW
                     KSHGYNLCNYYLTDARIVKEGWINKDWIVSNLQKDLDIRYINKFLGLLALEIWFRLFI
                     TKEIKPDVHLE"
     gene            complement(1857..>2577)
                     /locus_tag="VEJ68_04260"
     CDS             complement(1857..>2577)
                     /locus_tag="VEJ68_04260"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HXX06017.1"
                     /translation="VNKSKTKFTFLSPQRQGLEKGMDIIWKAIPMCKSDFEVLQVNWF
                     DQRNAEEKEIVREFLEKKPPQIKLIPLIKREDMPRYYAFADAILGQMRVGRNGGIERE
                     AVFCGRPVIHYSNSNITYLIDGHEMVAPYLPHSNDPEELAKVIDRVVQERGFREKLFE
                     EESEFVDKISNPHKVAAEWDNLFETVHSRFKIIERNTPHFKIEILNLISKMAERLLYE
                     KRWKNKKAPVLQSNDFPKTIK"
BASE COUNT          833 a          451 c          442 g          851 t
ORIGIN      
        1 ccattatccg ggtgcaggag tgggaggacc ttgcttgcca gtaaactcgt atcaaattct
       61 aaattctgct agatctatgg aaaataatgg tctattgaaa ataattcgtg tagcaagaga
      121 aactaatgaa tcaatgccat atcatgttgt tgaattactc gctgatgcct taaacgaggt
      181 aggcaagtca gtgaagggaa gcactgtagc gttactaggt gtttcttaca aacctaatgt
      241 gaaagatatt caattagctc cagctgagtc aattataaga agactagatc agcttcaatc
      301 gattgtaaaa atttatgatc cttattacca gtctacttat gtttattctc ataaaacaga
      361 aaaaagtcta attgacgcaa ttgctaatgc cgatgcagtg ataattgtta ccgctcataa
      421 tgaattctgt aatgttgatc catctttgtt tgtatcaaaa atgagaactc ctgtaataat
      481 tgacgcaagg ggaatcattg atgttcacgc cgcaaaaaaa gcaggactag tctttagagg
      541 gatagggcgt gggggggtat agccaaataa caaatgcttc cctgaaaagt attctcaccc
      601 tgagatatga ctacactata caatcatcaa aattaccaaa attagaatgg cgggattttt
      661 tcgagaaaca ttctactaac gttattgaga tggttgaaaa ttccataata aacacattga
      721 aaaaacagat tggacaacaa aaaaaggtgg cagtggcgct aagcggggga gttgattcag
      781 ctcttatgtt acttctgctt agaaagacct tcccaaaaat caatattgtt tcaatatccg
      841 ttgtctttgc caatagtata gatgaatcaa aacaagcaaa attaattgca gagaaatttt
      901 cctcagaaca taaagtccta tttgtagaaa attatcttag agatttaccc aaggctataa
      961 gcatcataaa acttccattt tgggatttgc attggtatac tatagtaaaa gagacaaaag
     1021 atgtcgccaa gactcttgtt tctggtgatg gaggagatga gttattcgga ggatatacat
     1081 ttcgttatca aaaatttctg tcacttatca atcacaagtc ctccgtattg gaaaaggttc
     1141 aagcctatct ccaatgccat gaaagagatt gggttccaaa tcaagagaaa gtatttggta
     1201 aaaaaattcc attctcatgg gatgagatct attctacact gtatccattt tttgacaatc
     1261 ccctgcctcc attgggccaa gtatttttgg cagattttaa cggaaaacta ctacataatt
     1321 ggctcccact caactctgaa tttcatcaat attttggggt aatgcaagta acgccaatcc
     1381 tcacaagcga tttgatctct tatgctacac acataaaata tgatttgaaa tattccaaac
     1441 aagataatgt tggtaaactt gttctacgaa atattctaag taaatataat tctgattcgg
     1501 tggtatctgc tactaaacaa ggattttctg tggatactac aagtctctgg aaatcacatg
     1561 gctataattt atgtaattat tatctgacag atgcaagaat tgtaaaggaa ggttggataa
     1621 acaaggattg gatagtttct aatctgcaaa aagatcttga cataaggtac ataaacaaat
     1681 tcttagggct gcttgcatta gaaatttggt ttagactatt tataacaaag gaaataaaac
     1741 cagatgtcca tttagaataa aacggacaaa ctcgtgattg acttgatact acaagaatgc
     1801 agctactagt aaatatgtca taatttttat tttatgttac atattcacat cttatgctat
     1861 tttattgttt ttggaaaatc attagactga agtacaggtg cctttttatt tttccacctt
     1921 ttctcgtata gcaatctttc tgccattttt gagattaaat tgagaatttc tattttaaag
     1981 tgtggagtat ttctttctat tattttgaat cttgaatgaa ctgtttcaaa tagattatcc
     2041 cattcagcag ccactttatg aggattagaa atcttgtcga caaattcact ctcctcctca
     2101 aataatttct ccctaaatcc tctttcttgt acaactctgt caattacttt agctaattct
     2161 tcaggatcgt ttgaatgtgg taaataagga gcgaccattt catgcccatc aattaggtat
     2221 gttatgtttg aattgctata atgaataacg ggtcttccac aaaaaactgc ctctcgctct
     2281 attcctccat ttcgtccgac tctcatttgt cctagaatgg catcagcaaa tgcatagtac
     2341 cttggcatgt cttctcgttt tatcaaagga atcaacttta tttgtggtgg ttttttctcc
     2401 agaaattctc taactatttc cttttcttct gcatttcttt gatcaaacca attaacttga
     2461 agaacttcaa agtcagactt acacattggt atagctttcc aaattatatc cattcccttt
     2521 tcaagtcctt gtctttgagg actaaggaaa gtaaattttg tcttggattt attaact
//
LOCUS       DASPUS010000179         2722 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_369403, whole genome shotgun sequence.
ACCESSION   DASPUS010000179 DASPUS010000000
VERSION     DASPUS010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2722)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2722
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369403"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..743
                     /gene="pgk"
                     /locus_tag="VEJ68_04265"
     CDS             <1..743
                     /gene="pgk"
                     /locus_tag="VEJ68_04265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016940080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HXX06018.1"
                     /translation="HPSITGFAYVLPSCAGRLVEREVRKLDEIMTVAKGPHVIVLGGS
                     KVVDRLEAIEELIQNGRADQVLLTGVIANVFLRAQGRIKSTLGIKREEEVVQKAHSLI
                     GEYPDVFSVPVDIAVDRNGKRVEMDVRELTKGDKILDLGPKSVEYYQKSIQSAGTVFM
                     SGPAGFFENENFKFGTESLLRAVANSFATTIVSGGHLTAALKIYGLADKINHISTAGG
                     ALVLYLTGVKLPMIQALEEAAERYRAKK"
     gene            complement(733..1071)
                     /locus_tag="VEJ68_04270"
     CDS             complement(733..1071)
                     /locus_tag="VEJ68_04270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06019.1"
                     /translation="MSAQISSIPLQIRKIIFEKFNDTNLRFTNDEIFESLQNTGLAGS
                     LTIDDMEPYFNQLHNEGLIRPIAQNFTTQWYKLFEVVEKLHCKSCNQEIYLGKLEPRV
                     CTNSACKATF"
     gene            complement(1073..1513)
                     /locus_tag="VEJ68_04275"
     CDS             complement(1073..1513)
                     /locus_tag="VEJ68_04275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018039412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HXX06020.1"
                     /translation="MSSADIYREIILDYYRNPRNYGKIQNPDVAQRDSNPLCGDELEM
                     HLNIKDNKVVDVKFTGKGCAISQASASMLTELIMGKDFDYVKKLSKEDILNNLGLNEL
                     GPARIKCALLSLKVLKSGLYSYVAEKLKDTASADKIKEEASGLY"
     gene            complement(1510..>2722)
                     /locus_tag="VEJ68_04280"
     CDS             complement(1510..>2722)
                     /locus_tag="VEJ68_04280"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0006534 - cysteine metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HXX06021.1"
                     /translation="RNDFPILKRKVHKVKPLVYFDNAATTQKPIQVIDAISNYYLNYN
                     SNIHRAVHELAEEATAAYETTRDKVAKFINIKNREEIVFVRGTTEAINLVAYAWGRQN
                     VNKDDIVVTTEYEHHSNIVPWQLLTKEKGAKLEYIGVDDNGELILEQLDKYLETGRVK
                     LVTFSQMSNVLGTISKSEEIINKCHKKGVKVLVDAAQSVPHIKVDVQKLDCDFLAFSA
                     HKMLGPTGVGVLWARKELLEQMAPFNGGGDMIREVHKYETTWNDLPYKFEAGTPNIAD
                     VIGFSAAIDYLERIGMDKVREHEVELTRYALDKLSQIKGIKLYGPMDASKRGGVISFN
                     LGDIHPHDLATIIDEDGVAIRSGHHCAQVLMERLDVSATSRASFYIYNTKNEVDVFIK
                     SLYRAKELFRI"
BASE COUNT          788 a          517 c          514 g          903 t
ORIGIN      
        1 ctcatccatc aattacagga tttgcatatg tattgccttc ctgtgcaggc agattggtag
       61 aacgcgaagt aaggaaactc gatgagataa tgacagttgc aaaaggccca catgttatag
      121 ttcttggagg ttccaaggtt gtagatagat tggaagcaat tgaggaactt attcaaaatg
      181 gaagagcaga tcaggttcta cttactggag ttatcgcaaa tgtgtttttg agggcacagg
      241 gtagaatcaa atctactttg ggaataaaaa gggaagaaga ggttgtccaa aaagcacatt
      301 cattaattgg ggaatatcca gatgttttct cagtaccagt agatatcgca gttgatagaa
      361 acggaaaaag agtcgagatg gacgtacgtg agcttacaaa aggagataag attcttgatc
      421 ttggaccaaa atcagttgaa tattatcaga aatccataca aagtgcaggt actgtattta
      481 tgagcggtcc ggcaggattc tttgagaatg aaaattttaa gtttggaaca gagtcactcc
      541 taagagcagt agcaaattcc tttgctacaa caatagtaag tggcggtcat ctgactgctg
      601 cgctaaaaat ttacggttta gctgacaaga taaaccacat tagtactgca ggaggcgcat
      661 tggtactata tcttacagga gtaaagcttc ctatgattca agcattagag gaagctgcgg
      721 aaagatacag agctaaaaag tagccttaca tgcagagttt gtacagaccc taggttctag
      781 ttttccaaga taaatttctt gattgcatga tttgcaatga agtttttcca ctacctcaaa
      841 aagtttgtac cactgggtgg taaagttctg tgcaattggc ctgatcaagc cttcgttgtg
      901 aagttgatta aagtatggtt ccatatcatc tattgtaagc gaaccggcaa gtccggtatt
      961 ttgtagactt tcaaagattt cgtcatttgt gaatctcagg ttagtgtcat tgaatttttc
     1021 aaatataatc ttcctaatct gtaatggaat tgaggatatt tgtgcactca aactagtaaa
     1081 gacctgatgc ttcttctttt atcttatctg ccgatgctgt atcctttagc ttttcagcaa
     1141 cgtacgagta aaggcctgac tttagaactt tcaacgataa caatgcacat tttattcttg
     1201 caggtcctag ctcattcaac ccaaggttat tcaggatgtc ttctttagaa agttttttta
     1261 cgtaatcaaa atctttaccc atgataagtt ctgttaacat agatgcactt gcttggctta
     1321 tagcacatcc ttttcctgta aattttacat caactacttt gttatctttg atattaaggt
     1381 gcatttcaag ttcatcacca catagaggat tactgtctcg ctgtgctaca tctggatttt
     1441 gaatcttgcc gtagtttctt ggatttcgat aatagtcaag tattatttca cggtaaatgt
     1501 ctgcactact caaattctaa acagctcctt tgcacgatat agtgatttga taaaaacatc
     1561 tacttcgttc tttgtattat agatataaaa gcttgcgcga gaagttgctg agacatccag
     1621 tcgttccatt aacacttgtg cacagtggtg ccctgaacgt attgcaactc catcttcatc
     1681 aattatagta gcaaggtcat gaggatgtat gtcccctagg ttaaatgata tgacaccgcc
     1741 tcgttttgat gcatccattg gaccgtaaag ctttattcct ttgatctgag atagtttatc
     1801 cagagcatat cttgttagct ctacttcgtg ttctcgtacc ttatccatac caattctttc
     1861 aagataatct atcgcagctg aaaaacctat tacatctgct atatttggag tacctgcttc
     1921 aaacttgtat ggtaaatcat tccatgtagt ttcatacttg tgaacctctc gtatcatatc
     1981 acccccgccg ttaaatggag ccatctgttc aagcaattcc ttccttgccc acaatactcc
     2041 tacacctgta ggtcctaaca ttttatgagc agaaaatgcg agaaagtcgc agtcaagttt
     2101 ctgaacatct accttgatat gcggaacaga ctgagcagca tctactagta ccttgacacc
     2161 ttttttgtga catttattga tgatttcttc agatttggat atagttccta aaacattaga
     2221 catttggcta aatgtaacaa gcttcaccct acctgtttcc agatatttat caagttgttc
     2281 aagtattaat tcgccattgt catcaactcc aatgtattct agttttgcac ctttctcttt
     2341 tgtcaaaagt tgccatggaa caatattgct atgatgctca tattcggttg taacaacaat
     2401 gtcatctttg ttaacatttt gtcgtcccca agcatatgca acaaggttaa tcgcttcagt
     2461 tgtgcctcgg acaaaaacta tttcttcacg atttttgatg ttaatgaatt tagcaacctt
     2521 atcccgggtg gtttcatatg ctgcagttgc ctcttcagct aactcatgca ctgctcggtg
     2581 aatatttgag ttgtaattta gataataatt acttatagca tctattactt gtattggttt
     2641 ctgcgtagtt gcagcgttat caaaatatac tagtggttta accttgtgaa ctttacgttt
     2701 tagaatagga aaatcatttc ga
//
LOCUS       DASPUS010000180         2554 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_649392, whole genome shotgun sequence.
ACCESSION   DASPUS010000180 DASPUS010000000
VERSION     DASPUS010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2554)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2554
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_649392"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            604..741
                     /locus_tag="VEJ68_04285"
     CDS             604..741
                     /locus_tag="VEJ68_04285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YHS domain-containing protein"
                     /protein_id="HXX06022.1"
                     /translation="MPIDPVCGIEMDEKLATIYEHKGKNYYFCSEGCKRIFIRKPKKY
                     T"
     gene            complement(1050..1379)
                     /locus_tag="VEJ68_04290"
     CDS             complement(1050..1379)
                     /locus_tag="VEJ68_04290"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015168033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HXX06023.1"
                     /translation="MSEEEAYKKLSEQEIEREVSKLKGWKVANGKLNQNFEFNNFVHA
                     FGFMTKVAMEAEKMNHHPEWFNVYNKVIIELVTHDVQGISNYDIKLARIVNQLYENEN
                     SEYIKGT"
     gene            1833..2531
                     /locus_tag="VEJ68_04295"
     CDS             1833..2531
                     /locus_tag="VEJ68_04295"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HXX06024.1"
                     /translation="MKAVFIRSKNKVAVDDISIPNLGDQDVLVKMRACGLCGSDLEKV
                     YGDYGMSSSRLGHEPTGYIIDVGKSVKGFSVGDRVFVHHHVSCYACHYCWHGDFTMCN
                     MYQKSCIEPCGLSEQILVPGLNILRGGLVKLPGNVTFDEASLIEPLACCIRGLAKCKF
                     QKADDIAILGAGPAGLMHVILAKLIGAEKLWFSISINSDWILPRDILMLIHIILLGIR
                     ISLKKYEILLIVEV"
BASE COUNT          823 a          449 c          466 g          816 t
ORIGIN      
        1 tattgatttt aaatttatta ttttgttgat cacagagcca cattttccac aaacaatctc
       61 tatggatggg taggacatga taataatacc cctattatcc gatagaatat caaattttac
      121 gtcaagatgg attgacgaaa ttagtaataa taatttttaa cgatgacaac caagaatatc
      181 ttatcatttc caattgatgg ttctcctaac ctgaaataag cagataaccc acgtactata
      241 ccttgaacca ttcgagattt taaaacctag aaaggcatga gacctaacat cacgattaga
      301 ataatgaaat ggtgctcaaa cattaccaat attcatcatt ttagttgcta caccccccac
      361 tttcaatcaa tgataattct caaatgcttg atatgtctga tttttacgaa cgacgaaatt
      421 gcgaaaatat ccagtcaacc tatgaagccg aaacaaagtc agatgcattc acaaacagat
      481 ttcttcaaac agaatttcgt agatgatata acgacatcta tctgtgtagt gcgtgtatct
      541 aaattcaaca gcaatatcat gattctaaag aataaataac aatatcatga ttcctatagc
      601 tgtatgccta tcgatcctgt atgcgggata gaaatggatg aaaaacttgc gacaatatac
      661 gagcacaagg gtaaaaacta ctatttctgc tctgaaggct gcaaaagaat ctttattaga
      721 aagccgaaaa aatatacttg atcctcatcc tttgaaaatc aaactatttt cgcttcctat
      781 gcatgatgtc tcaaataact ctattggtaa ttataagata tgtacagctc ggccaaagac
      841 acaatagaag tgaatctagt aaaatgtttt ttgataaaaa tgcactatca acttgcatat
      901 gcatctcagc ttctggtcta gggtcctatg ccggagatca caaaccatta aggcccattg
      961 tcgaggggcc aatgtacggc ctatattcat atagatgcgt gaggaatccc tcctaccgtg
     1021 gcgatgagaa actcaaatag gtacaatttt caagttccct taatatattc actattctca
     1081 ttctcataca attggttgac gatacgtgcc aatttgatat cgtaattgct tattccttga
     1141 acatcatgag ttactaactc aattataacc ttattgtaaa cgttaaacca ctctgggtga
     1201 tggttcattt tctctgcttc cattgctacc ttcgtcatga aaccgaatgc atgaacgaag
     1261 ttattaaatt cgaaattttg atttaatttt ccgtttgcta ctttccatcc tttaagtttg
     1321 ctaacctctc tttcgatttc ttgttctgat aatttcttgt aagcctcttc ttccgacata
     1381 atttaaattc tacttatcta tctattacat gtttcttatt ggtggtttta atcaaaggta
     1441 ttatcaaaca taggacatct tacaagttta attcgtcgtt ctctggatca ttgatataac
     1501 ctactgtacc ttattgttgg atacaaatgg agtatcgcgt taattatcat accattcagc
     1561 tatttttaat gctttttttg gacccacagc agtttagaaa atagatagcc atagtgggca
     1621 gatttgatta tggctgggac gatcttgaga gttcaagatc actttttcga cagttgattg
     1681 ttatggcgta aataaaaaca atgtccgaca cgtgagatct attacacaaa taatgtgtac
     1741 gcgaaaaggc aaacacaaca acatggttaa tggaaatata taagtaggat tctttctcat
     1801 ttttataacg gacaagtaaa aagtaacgat taatgaaagc agttttcata agaagcaaga
     1861 acaaggtggc agttgacgat atttccatcc caaatcttgg cgatcaagat gttcttgtaa
     1921 aaatgagagc atgtggatta tgcggttctg atttggagaa agtttacggt gattacggaa
     1981 tgtcgtctag tagattgggt catgaaccta ctggatacat aatagatgtg ggaaagtcag
     2041 tcaagggctt cagcgtggga gaccgcgtat ttgtacatca tcatgtctcc tgttatgcat
     2101 gtcattattg ttggcacggt gatttcacga tgtgtaatat gtatcaaaag agctgtatcg
     2161 aaccatgcgg cctatcggaa cagatcttgg ttcctggttt gaatatactc agaggtggac
     2221 ttgttaaatt gcctggaaat gtaacgtttg atgaagcttc tctgatagaa ccattagcgt
     2281 gttgcataag aggtctggcc aaatgtaaat tccaaaaagc agatgacatt gcaatactgg
     2341 gtgcagggcc agctggatta atgcatgtaa tccttgcaaa attaatcggt gcggaaaaat
     2401 tatggttctc gatatcaatc aattcagatt ggattttgcc aagagatatt ttgatgttga
     2461 tacatataat attgctaggg ataaggatat cgttaaaaaa atacgaaata ttactgattg
     2521 tagaggtgta gatactacaa ttgtggctac aggg
//
LOCUS       DASPUS010000181         5791 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1053402, whole genome shotgun sequence.
ACCESSION   DASPUS010000181 DASPUS010000000
VERSION     DASPUS010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5791)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5791
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1053402"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..723)
                     /locus_tag="VEJ68_04300"
     CDS             complement(<1..723)
                     /locus_tag="VEJ68_04300"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004612 - phosphoenolpyruvate
                     carboxykinase (ATP) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HXX06025.1"
                     /translation="MKFTINTFLGAWLGCVIEYSSITSLAEYYKNRDLFYRVIELLGK
                     VSMIRRDNKEFHDESVYPMIEDLEPASTRLLMSQLQQMSIKPSKIHRNLPVQKIIDLI
                     MDKNEGILTANGSIAVKTGKYTGRSPDDRFIVDDELTHSTVDWGKINHPIPEDKFDKL
                     FEKMKKHLENKEIFIFDGFVGADLEHRLPVRIITDHAWQNLFVRQLFIRPSAAELESH
                     KPEYTLLAINDFKAIPETDGTRT"
     gene            738..1139
                     /locus_tag="VEJ68_04305"
     CDS             738..1139
                     /locus_tag="VEJ68_04305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32e"
                     /protein_id="HXX06026.1"
                     /translation="MPINKEALELRKKVSQRRPEFVREESWRYVRLLPRWRKPKGIDN
                     HQRKQKKGWPALVKIGYGGPKVARGLHPSGYTDNLVYNLKDLEKLNPKTDGIRFGHGV
                     GKRKRLEIITKAKEKNFKVFNARVSISGSKS"
     gene            1123..1572
                     /locus_tag="VEJ68_04310"
     CDS             1123..1572
                     /locus_tag="VEJ68_04310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010191569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19e"
                     /protein_id="HXX06027.1"
                     /translation="MVVNLKTKRQLVSRILGVGVDRVKFDPEHLDDVADAITRDNIRS
                     LITANVIEIRPIKGTSKGRSHFKKLQRRKRGTKQGSKKGRKGARIGKKQVYVKKIKAL
                     RHQLQVSKLRKEITNENYWKLYRQVRGNQVRNLAHLRSLIEAVHSKK"
     gene            complement(1574..1870)
                     /locus_tag="VEJ68_04315"
     CDS             complement(1574..1870)
                     /locus_tag="VEJ68_04315"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HXX06028.1"
                     /translation="MKLEDKVYKKLLEVPKGKVTTYGELAKAVGLKNGQRAIGRMMNK
                     NPYPVIVPCHRVILSSGKVGGYAWGENVKTKMLSKEGVKIKNGKILHSDIIYRF"
     gene            complement(1867..2643)
                     /locus_tag="VEJ68_04320"
     CDS             complement(1867..2643)
                     /locus_tag="VEJ68_04320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HXX06029.1"
                     /translation="MQLLVAYQSDPAGSNMATYIAKDMDKVGDIFHGKHFDLILIPTP
                     VISADWIEEKYPYDGYVFLSKHASESGDLALTCHSTGNFSDALFGGFPKQVAIPHPHL
                     QKSYMQHLWKKKDNFSRFEITIEATHHGPTALNKPTIFIEIGTTQKEWTDKKLCEGIA
                     QIVIEEMSKEPSKHNVAICFGGTHYPEKFNKELIEGQFALGTVMPKHALDSLDGELFS
                     HILSRNKEAKFALIDWSGLGKNKQKVIDLVQTTDLEMIKL"
     gene            2683..2862
                     /locus_tag="VEJ68_04325"
     CDS             2683..2862
                     /locus_tag="VEJ68_04325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HXX06030.1"
                     /translation="MVNARQMLKDMVNTIKLAKKSDKDDYMQHLRLVLLGMATVGGIG
                     FIIQFTFAVINLGHR"
     gene            2865..3320
                     /locus_tag="VEJ68_04330"
     CDS             2865..3320
                     /locus_tag="VEJ68_04330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor Spt5"
                     /protein_id="HXX06031.1"
                     /translation="MTQEIKSHFFAVRTTGGQEKVVMGLLENRIKLKKLNLQSVLLLE
                     NLKGYVVIEAIDANAAFDALQGIRHIRGQLRGELQFKDIEGYLVKKSTVSELKVDQVV
                     EIIGGPFKGMKATITRVEHDKEEATVILLDAPYQLPVTVDANYLKPSTS"
     gene            3358..3840
                     /locus_tag="VEJ68_04335"
     CDS             3358..3840
                     /locus_tag="VEJ68_04335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HXX06032.1"
                     /translation="MAEMQTVSALVTGGQANAGPPLGPTLGPLGVNILQIVNAINEKT
                     KDFEGMKVPVTVSVDKKTKQWTVEVGIPSAAALILKEAGLQKGSGTSGATWVGDITPD
                     AVVKVAKLKIDSSYATDIKSAAKEIIGTCLALGIKINGKNPKEITPEVNAGKWDDKFK
                     "
     gene            complement(3842..4276)
                     /locus_tag="VEJ68_04340"
     CDS             complement(3842..4276)
                     /locus_tag="VEJ68_04340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HXX06033.1"
                     /translation="MKIITELARDGNISVPNLSKKLGINTSVLYSRIKRLLKKKLIKK
                     FTIMVDESLIGIGVKATMGINRDPKQKDQIHKSLLKTPEVVAISEVTGRFDILITLRA
                     TNLEELHTVAIEKIGKIEGIQNTETFVELQRTDKDPIYSKTE"
     gene            4466..5122
                     /locus_tag="VEJ68_04345"
     CDS             4466..5122
                     /locus_tag="VEJ68_04345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013482499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HXX06034.1"
                     /translation="MINEPQIAQMITDAKKGTKQRKFKQAVELIMVFKDIDVKKGFAI
                     NETVQLPKKMNQPASVCVIASGDLSLKAKNANADKVIDGTQLTQTGTNKRESRKLING
                     YDFFLADTQLMANVGKTLGQFMGPRGKMPTPVPFNAPIDSILERFRSSIRVRLRNSLS
                     LACKIGDETMTDEDLLANANAVISTIEKKLPSGDKNIKKIMIKTTMGKISKPPQAGAK
                     "
     gene            5124..>5791
                     /gene="rplJ"
                     /locus_tag="VEJ68_04350"
     CDS             5124..>5791
                     /gene="rplJ"
                     /locus_tag="VEJ68_04350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HXX06035.1"
                     /translation="MHQNRTEYPKKKTQMYQQLQELPKKYKVIALVRMEKVRSSQLLP
                     LRKKFKGEVEIISVKDKVAQKALASTKIPAIEKMLDKLVGQCVLIFTNMSPFKLNILF
                     GKNKIMLAARGGDKASIEVVIKAANTGITPGPILTDFKEAGIATKIDQGTVWITKDST
                     VAKKGDVISTKLATLLSKLDVKPVEAGIVLNSALEENIVYNQEELVIDVEKYREAFAQ
                     AHHEA"
BASE COUNT         1932 a         1058 c         1123 g         1678 t
ORIGIN      
        1 agttcttgtg ccatctgtct ccggaattgc tttgaaatca tttattgcaa gtagagtata
       61 ttcaggtttg tgcgactcta gctctgcagc tgatggtctt atgaataatt gtcttacaaa
      121 caagttctgc caagcgtggt cagtgattat tcgtaccggc aacctgtgtt ctagatctgc
      181 tccaacaaat ccatcaaata tgaagatctc cttgttctct agatgcttct tcattttctc
      241 aaatagcttg tcaaatttgt cttctggaat tggatggttt atctttcccc aatctactgt
      301 tgagtgagtt agctcatcgt ctacaataaa ccggtcatct ggagatctac cagtgtattt
      361 gccagtcttt actgcaattg aaccatttgc agttaggata ccctcatttt tatccatgat
      421 tagatctatt atcttctgta ccggaaggtt tcggtgaatc ttgctcggtt tgatactcat
      481 ttgttgtagt tgagacatga gtagacgagt actggctggt tccaaatcct ctatcatggg
      541 ataaaccgat tcgtcatgaa attccttatt atctcttcgg atcatagata cttttcctaa
      601 gagttctatc acacggtaaa ataagtcacg atttttataa tattctgcta agcttgtaat
      661 agaactatat tcaataacac accccaacca tgctccaaga aacgtattta ttgtaaattt
      721 caagcagagt tctctacatg ccgatcaata aagaagctct tgagctcaga aaaaaagtaa
      781 gtcagcgtag accagagttt gtcagagaag agagctggag atatgtaaga ttattgccac
      841 gatggagaaa gcccaaagga atagacaatc atcagagaaa acagaagaaa ggatggccag
      901 cacttgtcaa gataggttat ggcggaccaa aagtagcaag aggattacat ccgtctggtt
      961 atacagataa tctagtttac aatttaaaag atttagaaaa actaaatcct aaaaccgatg
     1021 gcatcagatt tggtcacggt gtaggaaaac gaaaaagatt ggagataatt acaaaggcca
     1081 aagaaaagaa tttcaaagtt ttcaacgcga gagtgtcaat aagtggtagt aaatcttaaa
     1141 acaaaaagac agctggtctc aagaatcctc ggcgtagggg tagacagagt aaagttcgat
     1201 ccagaacact tggatgatgt ggcagatgca attactagag acaacatacg aagtttgata
     1261 actgcaaatg tcatagaaat aagaccaatc aaaggtacgt ctaaaggaag atcacacttt
     1321 aaaaaattac aacgccgtaa acgtggaact aaacaaggtt caaagaaagg taggaaggga
     1381 gcaaggattg gcaaaaagca agtatatgtc aaaaagatca aggcattgcg ccaccaactc
     1441 caagtctcaa aactaagaaa ggaaattaca aacgaaaatt actggaaact ctacaggcaa
     1501 gtacgtggaa accaagtaag aaatctagca cacctacgaa gtttgataga agcagtgcat
     1561 tcaaaaaaat aaatcaaaat ctgtaaatta tatctgaatg gaggattttg ccatttttaa
     1621 ttttgacacc ttcctttgat agcatttttg tttttacatt ttctccccac gcatatcctc
     1681 ctacctttcc acttgataaa attactcggt gacatggtac aatcactgga tatggattct
     1741 tgttcatcat cctacctatt gctctctgtc cgtttttcaa cccaactgcc tttgcaagtt
     1801 ctccataggt cgtaactttg ccctttggca cttccaataa ttttttgtat actttatctt
     1861 ctaatttcat aatttaatca tctccaggtc tgttgtttgt actagatcaa ttaccttttg
     1921 tttatttttc cctagtccac tccagtcaat tagtgcaaat ttggcttcct tgtttctgct
     1981 taaaatatgt gagaatagtt caccgtccaa ggaatctagt gcatgttttg gcattacagt
     2041 gcccaatgca aattggcctt caattaactc cttgttgaat ttttctggat agtgagttcc
     2101 tccaaagcag attgctacgt tatgttttga tggctctttt gacatttctt ctatcactat
     2161 ttgtgcaata ccttcacata acttcttgtc agtccattct ttttgagttg taccaatttc
     2221 aatgaatata gtaggtttgt ttaatgcagt aggtccatgg tgagtggcct ctattgttat
     2281 ctcaaatctt gaaaagttgt ctttcttttt ccacagatgt tgcatgtatg atttttgaag
     2341 atgaggatgt ggaattgcca cttgttttgg aaaaccacca aacagtgcat ctgaaaaatt
     2401 tcctgtgctg tgacaagtaa gtgccaggtc tccgctttcg gatgcgtgct ttgacaggaa
     2461 tacatatcca tcatacggat acttttcctc tatccaatca gctgagatta caggtgtcgg
     2521 aatcaaaatc aaatcaaaat gtttaccatg aaaaatatct cccactttat ccatgtcttt
     2581 tgctatgtat gttgccatgt ttgagccagc aggatcagat tgatacgcta ctagcaattg
     2641 cataaaataa gaattataag gacactttat taatgtcctc caatggtaaa tgcaagacaa
     2701 atgctcaagg atatggtaaa cacaattaag cttgccaaaa aatccgacaa ggatgattat
     2761 atgcagcatt tgcgactggt acttttagga atggcaaccg taggtggtat tggctttata
     2821 atccagttta catttgccgt aattaattta ggacatagat agttttgact caagaaataa
     2881 aatcacactt tttcgctgtt aggactactg gtggtcaaga aaaggtagtc atgggcctac
     2941 tagagaacag aataaagtta aagaaactaa atttgcaatc tgtcttactt ttagagaatc
     3001 ttaaaggata tgtggtaatc gaggcaatcg atgcaaacgc agcttttgac gcacttcaag
     3061 gaataagaca cattcgcgga cagcttagag gagaactcca gtttaaggac attgaaggtt
     3121 atttggttaa gaagtctaca gtatcagaac ttaaagttga tcaagttgta gagataattg
     3181 gcggtccatt caaaggaatg aaagcaacaa tcacccgagt tgaacatgac aaagaagagg
     3241 caacagtaat tttgcttgat gcaccttatc aattaccagt cacagttgat gcaaactatc
     3301 tcaaaccatc aacatcgtag caaggattaa atttacagta aagaggaaaa agaaatcatg
     3361 gcagaaatgc aaactgtttc agcacttgta acaggtggtc aagcaaatgc tggtccacca
     3421 ttaggcccaa ctttgggacc tttgggtgtc aatattttgc agatagtcaa tgccatcaat
     3481 gaaaagacaa aagatttcga gggaatgaaa gttcctgtta ctgtttccgt agataaaaaa
     3541 actaaacagt ggacagtgga ggtaggaatt ccttctgcag ctgctttaat tctaaaggaa
     3601 gcaggtcttc aaaaaggatc tggaacttca ggtgccacat gggttggaga cattactcct
     3661 gatgcagtag tcaaagtcgc aaaattgaag attgattctt cgtatgccac tgacataaaa
     3721 tcggcagcaa aggagattat tggaacatgc ttggcccttg gaataaaaat aaacggaaag
     3781 aatcccaaag agataactcc agaagtaaat gctggaaaat gggacgataa attcaagtaa
     3841 attattcagt ctttgaatat ataggatctt tatcggttct ttgtaattct acaaaggttt
     3901 ctgtgttctg tattccttca atcttaccta tcttctcaat tgctactgta tgtagttcct
     3961 caagattcgt ggctcgaagg gtgatcagta tatcgaatct tcctgtgact tcagatatag
     4021 ccactacttc gggggttttc aaaagggatt tgtggatttg gtctttttgt tttggatctc
     4081 tgttaatgcc cattgtcgcc tttacaccaa ttcctattag ggattcatct accattatgg
     4141 tgaatttctt tatcagtttc tttttgagta gtctcttgat tctactgtac aatactgacg
     4201 tgtttatccc taattttttt gaaaggttgg gaacagaaat attaccatca cgtgccagtt
     4261 ccgtaattat tttcatgtca agatcatcga atttgtgcaa ctttgcgaac tagtttttgt
     4321 tactatttaa taaatgtaat ttctttcaat aaaatccact ctaattacaa cataaatcag
     4381 agaatctgaa atttttagaa aatcacaagt catgaagaat attgtcgcta aacgatttta
     4441 aataggcaat caggaagcct tcgtaatgat caacgaacca cagatagctc agatgataac
     4501 agatgccaaa aagggtacaa aacaaagaaa attcaaacag gccgtagagc taatcatggt
     4561 cttcaaagat attgacgtaa agaagggatt tgcgataaat gaaacagtcc agttgccaaa
     4621 aaaaatgaat cagccagctt ccgtatgcgt aattgcatct ggagacttga gcctgaaagc
     4681 aaaaaatgca aatgcagaca aagtcatcga tggcacacag ctcacacaga caggtacaaa
     4741 caagcgcgag tcccgcaaat tgattaatgg ttatgatttc tttcttgcag atactcaatt
     4801 aatggcaaac gtaggtaaga ccttgggcca gttcatggga ccaagaggca agatgccaac
     4861 cccagttcca tttaatgcgc ccattgattc aatcttggaa agattcagat cttcaataag
     4921 agtaaggcta agaaattctc tatctcttgc atgcaagata ggagacgaga caatgacaga
     4981 tgaagacttg ttggcaaacg caaatgctgt aattagtacc attgaaaaga aattaccaag
     5041 tggtgacaag aacataaaaa aaatcatgat aaagacaacc atgggaaaaa tatctaaacc
     5101 accacaagca ggagcaaagt agaatgcacc aaaacagaac agaatatcca aagaaaaaga
     5161 cacagatgta tcaacagcta caagagcttc caaaaaagta caaagtgatt gctcttgtta
     5221 gaatggaaaa agtacgatct tctcaattat tacctttgag aaaaaaattc aagggagaag
     5281 tagaaataat tagtgtcaaa gataaagtcg cacaaaaagc gttagcaagt acaaaaattc
     5341 cagcaattga aaagatgctc gacaaattag ttggacagtg cgtattaatt tttaccaata
     5401 tgagcccctt caagctgaac atcctatttg gaaaaaataa gataatgttg gcagcaagag
     5461 gcggggacaa ggcaagcatt gaggtagtca taaaggcagc aaatactgga atcacaccag
     5521 gaccgattct tactgatttt aaggaagcag gaattgcaac aaagattgat caaggtactg
     5581 tctggattac aaaagactct accgttgcaa agaagggaga tgtaatctca accaaacttg
     5641 caacccttct cagcaaactt gatgtcaaac ctgtagaagc aggaattgta ctcaattccg
     5701 ctctagaaga aaatattgtt tacaatcaag aggagctagt aatcgatgtt gaaaagtaca
     5761 gagaggcctt tgctcaagca catcatgagg c
//
LOCUS       DASPUS010000182         2545 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_2021144, whole genome shotgun sequence.
ACCESSION   DASPUS010000182 DASPUS010000000
VERSION     DASPUS010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2545)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2545
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2021144"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..335
                     /locus_tag="VEJ68_04355"
     CDS             <1..335
                     /locus_tag="VEJ68_04355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06036.1"
                     /translation="KKYDLIYSHAVVDHVYDIDAFITKIAKNCLKYAYITSYRGYFPE
                     LSNHKMEWRDDDGCYYNDLSINQVKESLLSSGLQKDEFNIRSQEGSKKAGTMLQTIIE
                     INKKISKN"
     gene            447..1505
                     /locus_tag="VEJ68_04360"
     CDS             447..1505
                     /locus_tag="VEJ68_04360"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HXX06037.1"
                     /translation="MKLLIGGASSKFFHLKEFGEALTKFGIEYKLVQDTDVYTGFPSR
                     NVSRWFEGTKKFDELVAEFKPDAVFVDRQTHFGLAAIKAEIPLFMLLRGDYWSEMKWA
                     KETLYRYPLKRMVLKWKDRIAKQCFEGATAILPICKYLEDRVKEQYPEKKTEILYQGI
                     DPSKWYPVKNMELKHPCVGLLQSAWIWGKTREMLTLAKVLEEMPEVTFYWAGDGPYRD
                     KILETLGKFENFKWLGLLEYPDKVREYISGIDVYALVSGIDMSPLTLQEAQLMEKPVV
                     ATRAGGIPELMSNEKTGFLVEKGDQKGWTDRLSALLNDREKSKAMGVEGRKYVAENFS
                     WDKIAKKFVSVLDTYIKK"
     gene            complement(1512..>2545)
                     /locus_tag="VEJ68_04365"
     CDS             complement(1512..>2545)
                     /locus_tag="VEJ68_04365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="asparagine synthase C-terminal domain-containing
                     protein"
                     /protein_id="HXX06038.1"
                     /translation="TKRVSIALSGGIDSTLMLALLRKTFPDITIDAISIKFAESIDES
                     IQAQKIADKFDANHKVLFIENYLKDLPKAISIIKLPFWDLHWYHVVKEASSNTKFLVS
                     GDGGDELFGGYTFRYQKFLSLVNEKSSSMEKIKAYLECHERDWVPDQEKLFGEKLTFT
                     WNDIYTILEPYFENQLPSLGQVFLADFNGKLLYNWTPLYSKLHQYFKMTSIAPLLTND
                     LISYAIHLDYSLKYNEKNNIGKILLRKLLQKYIPETEISPSKQGFSVNTLNLWKSHGK
                     KLCEYYLNDGRIIKNGLISKEWISIHLNKLESNDNIRYVNKFLGLLALEIWFRLFITK
                     EMKSDETLD"
BASE COUNT          882 a          381 c          474 g          808 t
ORIGIN      
        1 caaaaaaata tgatctgata tattctcatg cagtggtaga tcatgtgtat gatattgatg
       61 catttattac aaaaattgca aaaaattgct taaaatatgc atacattact tcctaccgcg
      121 ggtacttccc ggaattatcc aaccataaaa tggagtggag agatgatgat ggatgttact
      181 ataatgatct ttctatcaat caagtgaaag agtcactttt gagctcaggt ctacaaaaag
      241 atgaatttaa cattagaagc caagagggta gtaaaaaggc tggtaccatg ttacaaacca
      301 taattgagat aaataagaaa atatctaaaa attaaatatt tttcagagac atttatggat
      361 tattagtaag attatatcta gttcactgag actctgtttg aacatatctt aataaggccg
      421 agaaataatt ttcactcaat ttaaaattga aattattaat tggcggagca agttcaaaat
      481 tctttcattt gaaggagttt ggtgaagcac ttacaaaatt tggtatcgaa tacaagttgg
      541 ttcaggatac agatgtttac acaggttttc caagcagaaa tgttagtcgt tggtttgaag
      601 gtacaaagaa gttcgatgaa cttgttgcag agttcaaacc tgatgcagtt tttgtcgata
      661 ggcaaacaca tttcggattg gccgctataa aagctgaaat tcctttgttt atgcttttaa
      721 gaggcgatta ttggtctgaa atgaaatggg caaaggaaac attatacaga tatcctttga
      781 aacgtatggt tctcaagtgg aaagaccgaa ttgccaaaca gtgttttgaa ggagctactg
      841 caatcttgcc gatttgcaaa tatcttgagg accgagtaaa agaacaatac ccagaaaaga
      901 aaaccgagat cttgtaccaa ggaattgatc cttctaaatg gtatccagta aagaacatgg
      961 agcttaaaca tccatgtgtg ggattacttc aaagtgcatg gatttgggga aaaacaagag
     1021 agatgttgac actagccaaa gtattagaag aaatgccaga agtaacattt tactgggcag
     1081 gagatggtcc atacagagat aaaatattgg agacacttgg taaatttgaa aatttcaaat
     1141 ggttgggatt gttggaatac ccagataaag ttagagaata tatttcggga attgacgttt
     1201 atgctttggt tagtggtatt gatatgtcac cactcaccct acaagaagca caattaatgg
     1261 aaaaacctgt tgttgcaact agagcaggag gcattcctga actgatgtca aatgaaaaaa
     1321 caggatttct tgtagagaaa ggagaccaaa aaggttggac agatagactt tctgcattac
     1381 tcaatgatag agaaaaatcc aaggccatgg gagttgaggg tcgcaaatac gtggctgaaa
     1441 acttcagttg ggataaaata gcgaagaaat ttgtatcggt tcttgacaca tatatcaaaa
     1501 aataagacag tttaatctaa tgtttcatca gatttcatct cttttgtaat gaataatcta
     1561 aaccaaattt ctaatgcaag caatcccaga aacttgttca catatcttat gttatcgtta
     1621 gattctaatt tattaagatg tatactaatc cattctttac ttatcaaccc gttcttgatt
     1681 attcttccat catttagata atattcacat aactttttgc catgtgattt ccaaagattc
     1741 aaagtattaa cagaaaatcc ttgttttgag ggagatatct cagtttcagg gatatatttc
     1801 tgtaagagtt ttcttaacag gatcttacca atgttatttt tctcattgta ttttaaagaa
     1861 tagtctaaat gaatggcata agaaattaaa tcattggtta aaagtggagc aatagaagtc
     1921 attttgaagt attgatgcaa tttagaatat aatggtgtcc agttatagag taacttgcca
     1981 ttaaaatctg ccaaaaagac ttgacctagt gaaggaagct ggttttcaaa gtatggttct
     2041 aaaattgtgt aaatatcatt ccaagtaaaa gtcagctttt ctccaaataa tttttcttgg
     2101 tcaggaaccc aatctctctc atggcattct aggtatgctt tgattttttc catagaagat
     2161 gatttttcat ttactaatga aagaaatttt tgataacgaa aggtataacc tccaaataat
     2221 tcatcaccac catctccaga cacaagaaac ttggtattgg aacttgcctc cttaactaca
     2281 tgataccaat ggaggtccca aaatgggagt ttgattatac taattgcttt tggaagatct
     2341 tttagatagt tttcaataaa tagaacctta tgatttgcgt caaatttgtc agcaatcttt
     2401 tgtgcttgta tggattcatc aatgctttct gcaaacttta tggatatagc atcaattgta
     2461 atatcaggaa aagtctttcg taataaggct aacatcaatg tagaatcaat tccaccacta
     2521 agtgcaattg aaactcgttt tgttt
//
LOCUS       DASPUS010000183         5601 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1745053, whole genome shotgun sequence.
ACCESSION   DASPUS010000183 DASPUS010000000
VERSION     DASPUS010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5601)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5601
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1745053"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..473
                     /locus_tag="VEJ68_04370"
     CDS             <1..473
                     /locus_tag="VEJ68_04370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HXX06039.1"
                     /translation="SFIEPHQSDRVEINRWIIPITHVINGKHVVVVDDSLVRGTSSKA
                     IIKALRRAGAKKISMVITFPPIKFPCYAGIDFPSLDELVTFMGDDKHYTEQEMTERVR
                     QIIGADFLGYNDSQNLANAIGMDSNSLCFTCSTGDYSTLGIKPTFKTRAEIKGE"
     gene            475..729
                     /locus_tag="VEJ68_04375"
     CDS             475..729
                     /locus_tag="VEJ68_04375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HXX06040.1"
                     /translation="MELSFVLVKSNVGHEMEVLNDILKIDGVKEVMGTYGQYDIFVKV
                     QAPTRTEVEKIITKKIRHIRNVVSTTTLPVIPGQGSKQDI"
     gene            791..1618
                     /gene="purC"
                     /locus_tag="VEJ68_04380"
     CDS             791..1618
                     /gene="purC"
                     /locus_tag="VEJ68_04380"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HXX06041.1"
                     /translation="MKFLRSGKVKDIYELDAENLIFHFTDRVSAFDVKFPTPIQRKGE
                     VLCKFAEFWFKRLPVQNHYVRTESKDKLVVKKMKMIPIECVVRGYFYGSLVQRWKEGQ
                     IKVPAGTDTKIAAKLPSPIFDPTTKSETHDVPITKKDAIDRHLVGASDYDWLEKTSIK
                     IYEDMSSIADKSQFILADLKLEFGKIGDDIILGDSIGPDEFRMWPKSSYQIGKIQESY
                     DKQLLRDWLALHGYQKKFEDERNHGNEPVAPELPTDLCAELSARYISVYERITGSSL"
     gene            1934..2464
                     /locus_tag="VEJ68_04385"
     CDS             1934..2464
                     /locus_tag="VEJ68_04385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HXX06042.1"
                     /translation="MSTLLQKDIKINKIHATNAEQTKALDDPARIKILQVLYHKQLPV
                     EQIVEELHNEGYKKATTTIRHHLDILREAGLVEIVKMEEVRGAVLKYYGTSVRILGNK
                     LPPNFENEFSKTIADASRKLEKVIENISQSAGSKMKKKSTKNNLEQNYEEYLLVEIVN
                     RAMTKVFENNGSILQK"
     gene            complement(2467..2883)
                     /locus_tag="VEJ68_04390"
     CDS             complement(2467..2883)
                     /locus_tag="VEJ68_04390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018003452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF371 domain-containing protein"
                     /protein_id="HXX06043.1"
                     /translation="MRISIPFYGHENIRSLHPKTIEITTESHLTVNGDCIIGVNADYG
                     CNDIPERMKTLLQNSKSSVDCTITVKDFSFKVKGKGNDKLTLKNPHDIVIRKSSFVCP
                     RTLATNCDSASNAIPRQMVKLLQNSETKGVFLIEVT"
     gene            2936..3673
                     /gene="psmA"
                     /locus_tag="VEJ68_04395"
     CDS             2936..3673
                     /gene="psmA"
                     /locus_tag="VEJ68_04395"
                     /EC_number="3.4.25.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000502 - proteasome complex [Evidence
                     IEA];
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaeal proteasome endopeptidase complex
                     subunit alpha"
                     /protein_id="HXX06044.1"
                     /translation="MLPAAAGYDRAITVFSPDGRLYQVEYAIETVRRGTLALGIKYKD
                     GIILAVEEKPRKLQNSEITQKIFQVDDHIGVAAAGYIPDARSQVDNARFFSQSNRMIY
                     DEPIEVESVAKHLADQCQQFTQYAGVRPFGVALIIAGIDKSGSTIFLTDPSGTYISYD
                     AVAIGAGSDQVTEYLEKFYKKDMTFEDATALAIESIYLVSEEKEGTKHIKMAQIPIDT
                     KVLTRMQEKDIEKFSAKAKENATKRQK"
     gene            3712..4527
                     /locus_tag="VEJ68_04400"
     CDS             3712..4527
                     /locus_tag="VEJ68_04400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008300689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative RNA uridine N3 methyltransferase"
                     /protein_id="HXX06045.1"
                     /translation="MKISIAIPDSSLMEEPTQLGKTQKISQIARACAIFRVNTIYLYH
                     EVDGTERDKSLLRITLRFLETPQYLRRSMYKKMDDLKFAGSLSPLKIPSHVQTSDPKK
                     VKQGDIRDGIIVYARGKKYVDVGLDKLIPYFGSDEEGKRIVIQFKEGFPNFTIKQIRR
                     DEIKQYWGYEVKEVSNLHNLLSVWNSHVIFTSRKGKTIHKSQKYFEEISDSEVLVVFG
                     SPKRGVHEILGKNLGNVPKSQILNLFPDQATETVRLEEAILGTLAILNILSHN"
     gene            4749..>5601
                     /gene="rplC"
                     /locus_tag="VEJ68_04405"
     CDS             4749..>5601
                     /gene="rplC"
                     /locus_tag="VEJ68_04405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010194288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HXX06046.1"
                     /translation="MGHRKHSQPRRGSLAYLPRSRAKSMEARIRTWPDVEGDQPKLLG
                     HAGFKAACMRIASIDDREKTPNFGKQLVSLGTVVVTPPMMIIGIRGYSKDRYGLDSIF
                     DIYAKDLPKELSRLFETKHDEKGLEKTEKLLGQVKDLFAIAAVMPSKAGLEQKKPFVF
                     EVMVKGGDVQKQFTFLKELLGKEVKIDQVFQKGAEVDTAAITKGKGFEGPITRWGVKK
                     KQHKSRKSVRALGTLGPISPATIMYTVPRAGQRGFHQRTQYNSRIMIVGNSENEEIKI
                     NPSGGFKH"
BASE COUNT         1998 a          879 c         1097 g         1627 t
ORIGIN      
        1 gtagttttat tgaaccacat caaagcgata gagtggaaat taaccgttgg ataataccaa
       61 taacacatgt gataaatggt aaacatgtag ttgtagttga tgatagcctt gtaaggggta
      121 ccagttcgaa ggcaataata aaagctctta ggagagctgg cgcaaaaaaa attagcatgg
      181 tgataacttt tccaccgatt aaatttccat gttatgcagg tattgatttt ccatctctag
      241 atgaattggt gactttcatg ggagacgata aacactatac cgagcaagag atgacagaaa
      301 gagttagaca aatcattggc gctgattttc ttggatataa tgactcgcag aatcttgcaa
      361 atgcaatagg gatggattct aattcgttat gttttacttg ttctacgggc gattattcta
      421 cattgggaat taaaccaacc tttaaaacaa gagcagaaat caaaggtgaa taatttggaa
      481 ctatcctttg tcttggtaaa gagcaatgtc ggacatgaaa tggaagtatt aaatgacatt
      541 ttgaagattg atggcgtgaa agaagtaatg gggacatatg ggcaatacga tatctttgtc
      601 aaagttcaag ctcccaccag aacagaagtt gaaaagataa taacaaaaaa aattcgtcac
      661 atacgaaatg tggtttcgac gacaaccttg cctgtaattc caggccaagg cagcaaacaa
      721 gacatttaaa tccactttac gagattggta gtctatcaat ttaaattcaa gccggttcaa
      781 tgacgcctga atgaaatttc tacgttcagg aaaagtcaaa gacatttacg agttagatgc
      841 tgaaaatttg atatttcatt ttacagatag ggtatctgcc tttgatgtta aatttccaac
      901 accaattcaa agaaagggcg aggtcttatg caaatttgct gaattttggt tcaaaagatt
      961 accagtacaa aaccactatg tgcgaacaga atcaaaagat aaactagtcg tgaaaaaaat
     1021 gaaaatgatt ccaattgaat gtgttgtacg tggatatttt tacggtagtt tggttcagag
     1081 atggaaagaa ggtcaaatca aagttccagc cggaaccgat actaaaatag ctgccaaatt
     1141 gccctcgcct atatttgatc ctactacaaa atctgaaaca catgatgtac cgattacaaa
     1201 aaaagatgcg atagatagac atcttgtcgg tgcatctgat tatgactggc ttgaaaaaac
     1261 atcaattaag atttacgaag atatgtcttc cattgcagat aaatctcaat tcattttagc
     1321 tgatcttaaa ctagaatttg gtaaaattgg agatgatatt attttgggtg actcgattgg
     1381 cccagatgag ttcaggatgt ggccaaaatc gtcgtatcaa ataggaaaaa ttcaagagag
     1441 ctacgacaag cagttattac gtgattggct tgcattgcat ggctatcaaa aaaagtttga
     1501 agacgaacgt aatcatggaa atgaaccagt agcaccagag ttaccaactg atttgtgtgc
     1561 agaattatcg gcaaggtata tttctgttta tgaacgcata actggaagca gtctttaact
     1621 cgaattttat tttttgtcct aatggaaatt ctgtcatttg tatccttggt tgtaccattt
     1681 gtatatgccc tgtcacaaaa aactaaaaaa attctgaaat ttagttttgt tgtaatgata
     1741 ctaatttgat tgtaatggta ataaattaat tattatgata ccaataatgt aactatgata
     1801 ttatactgat tgttttgcaa tctgaaaatt aagaactttt ttactattat ggtaacgtga
     1861 aaaaaaatta cgtagaggac aaaaaaatat gatctcgtga tcttttagga tgatttaaaa
     1921 atgaaagagc gaaatgtcca cattactaca aaaagatatc aaaataaata aaatacatgc
     1981 aactaacgca gagcaaacaa aggcactgga tgatcctgca agaattaaaa ttttacaggt
     2041 attgtatcat aaacagctcc ctgtagaaca aatcgttgaa gaattacaca atgaaggcta
     2101 caaaaaagcc actactacaa taaggcacca tcttgatatt ttacgtgaag ctgggttggt
     2161 agaaattgtc aaaatggaag aagttcgcgg tgcagtccta aaatattatg gaacttctgt
     2221 aagaattctt ggaaataagc ttcctccaaa ttttgaaaat gaattttcaa aaacaattgc
     2281 tgatgcatca cgcaagcttg aaaaagtaat tgaaaatatt tctcaaagtg ccggttcaaa
     2341 aatgaagaaa aaaagcacta aaaataattt ggaacaaaat tatgaagaat accttttggt
     2401 agaaattgta aatcgagcta tgactaaggt gtttgaaaat aacggttcaa tacttcaaaa
     2461 ataattctac gtaacttcaa ttaaaaaaac tcctttggtt tcagagtttt gtaatagttt
     2521 aaccatctgc cttggtattg catttgaagc tgaatcgcaa ttagtggcaa gagttctggg
     2581 gcacacaaaa gagctttttc taataacaat atcgtgagga ttttttaagg taagtttatc
     2641 attgcccttg ccttttactt tgaatgaaaa atccttcact gttatggtgc aatcaacgct
     2701 tgattttgaa ttttgtaaaa gtgttttcat tcgttctggt atgtcattgc atccgtaatc
     2761 cgcattaact ccaattatgc aatcgccatt tacagtaaga tgtgactctg ttgttatctc
     2821 gattgttttt ggatgaagtg atctaatatt ttcatgtccg taaaaaggga tcgaaatacg
     2881 catgatctgt tgcttgtata aacttaaatt aaaccttcaa aggaagaatt ttgaaatgct
     2941 tccagcagca gcaggttatg acagagcaat cactgtattt tctcctgacg gtagacttta
     3001 ccaagtagaa tatgctattg aaaccgttag acgtggtacg cttgcgttgg gaattaaata
     3061 caaagacggt atcatcttgg cagttgaaga aaagccaaga aagctacaaa attcagagat
     3121 tactcaaaag atattccaag tcgatgatca tattggcgta gcagctgcag ggtatattcc
     3181 agatgcaaga tcacaagtgg ataatgcaag attcttttca cagagtaaca ggatgattta
     3241 tgatgaacca atagaggtcg aatcagtagc aaaacacctc gcagatcaat gtcagcaatt
     3301 cacgcaatat gcaggagtaa gaccttttgg agtcgcattg ataattgctg gaattgataa
     3361 aagtggcagt acgatatttc taaccgatcc aagtggaact tacatttcat atgatgctgt
     3421 tgcgataggt gctggttctg atcaagtgac cgaatacctt gaaaaatttt acaaaaaaga
     3481 tatgacattt gaagatgcta cggcactagc aatcgaatcg atatatcttg taagcgaaga
     3541 aaaagaaggt acaaaacaca tcaaaatggc tcagatacca attgacacca aggttttaac
     3601 aagaatgcaa gaaaaggaca ttgagaaatt ttctgcgaaa gctaaagaga acgcaactaa
     3661 gagacaaaaa taacatctag tattttatac gactgtcaat tatcatccat attgaaaatc
     3721 tcaattgcaa ttcccgattc gtctttgatg gaagagccta ctcaacttgg caagacgcaa
     3781 aagatttcac agattgcacg tgcttgtgca atatttagag taaatacgat atatctttac
     3841 catgaagttg atggtacaga acgtgacaaa tcgcttctcc gaataacact tcggtttctt
     3901 gagactccgc aatatcttcg tagaagcatg tacaaaaaaa tggatgacct aaaatttgca
     3961 ggaagtctca gtccacttaa gatcccttcc catgtgcaaa cttctgatcc caaaaaggta
     4021 aaacaaggag atattcgtga tgggattatt gtgtatgcaa gagggaagaa atatgttgat
     4081 gtcggtcttg ataaactgat tccgtatttt ggatcggacg aagaagggaa aagaatcgtt
     4141 atacaattta aagaaggatt tccaaatttt actataaaac agatacgtag agatgaaata
     4201 aaacaatatt ggggttatga agttaaagag gtttctaatc tgcacaatct tctttctgtc
     4261 tggaattctc atgtcatatt tacatcccga aaaggaaaaa caattcataa atctcaaaaa
     4321 tactttgagg aaatttctga ttcagaagtt cttgtggtct ttggatctcc aaagagaggg
     4381 gtacatgaga tcttgggtaa aaatttgggg aacgttccca aatctcagat tttaaatctc
     4441 tttcctgatc aagcaacaga aacagtacgg ttagaggaag caatacttgg aacccttgcg
     4501 atcctaaaca tactttcaca taattagttt aatattaata attggtgaat gttttatgtt
     4561 gaaggacaag aaattttttt tagctgcagt aatggttgga attgctggaa taattattgg
     4621 aagtatagtt attgtaatac atcttgcaca ttttttatag aaagtttaac ttttgcaaaa
     4681 aaataatcta aagttgtatt ttctaataat agacttataa tggggttatc gacatttagc
     4741 gtttatcaat gggccatagg aaacacagtc aaccaaggag gggaagcctt gcgtacttgc
     4801 caagatctcg agcgaagagc atggaagcaa gaattcgtac ttggccggat gtagaaggcg
     4861 atcaaccaaa acttctcgga catgctggat tcaaggcagc ttgtatgcgt atagcgagta
     4921 ttgatgacag ggaaaaaact cctaattttg gaaagcaact tgtcagtcta ggcacagttg
     4981 ttgttacacc acccatgatg attattggaa tcagaggtta ctcaaaagac agatacggac
     5041 ttgattcaat ttttgatatt tatgcaaaag atttacctaa agaactttca agactctttg
     5101 aaacaaaaca tgacgaaaag ggtttggaaa aaactgaaaa acttcttgga caagtaaaag
     5161 atctttttgc aattgctgca gtcatgccca gtaaggctgg tttggaacaa aagaaaccat
     5221 ttgtttttga agttatggta aaaggcggtg acgtacaaaa acagtttaca tttctaaaag
     5281 aactattggg aaaagaagta aaaatagatc aagtctttca aaaaggtgca gaagttgata
     5341 ctgcagctat aacaaaaggc aaaggctttg aaggtcctat tacaaggtgg ggagtaaaaa
     5401 agaaacagca caaatcaaga aagagtgtaa gagctcttgg tactctaggt ccaattagtc
     5461 ctgcaacaat catgtatact gttccaagag caggacaacg tggattccat caaagaactc
     5521 aatacaacag tagaataatg atagttggaa attctgaaaa cgaagaaata aaaattaatc
     5581 catctggtgg attcaaacac t
//
LOCUS       DASPUS010000184         2419 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_2021224, whole genome shotgun sequence.
ACCESSION   DASPUS010000184 DASPUS010000000
VERSION     DASPUS010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2419)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2419
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2021224"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..469)
                     /locus_tag="VEJ68_04410"
     CDS             complement(<1..469)
                     /locus_tag="VEJ68_04410"
                     /inference="COORDINATES: protein motif:HMM:NF012286.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate dehydrogenase"
                     /protein_id="HXX06047.1"
                     /translation="MISIIGSGRVGSALAFLLASEALDDIVLVNKPKNKAIGESLDIM
                     SALPAKTKVSITGTDEMFKIKKSDIVIITASAGTIKTERIDLLPFNVPIIQEISRDIR
                     KFADDAKIIVVTNPVDIITYQVLKETGFDSDRVIGMGSSLDSTRFRYLVSKELT"
     gene            complement(476..904)
                     /locus_tag="VEJ68_04415"
     CDS             complement(476..904)
                     /locus_tag="VEJ68_04415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HXX06048.1"
                     /translation="MLKTKIKKILVPLDGSNFSFKALSEAIYLARQCEGTITGLYVVP
                     FYPRNLGDLIGPIRAKLYGDAKKIMNKAELLCAQNGIVFKRKISYGDAKSEILDFAKN
                     FRFDIIVIGSRGLAPVKELLLGSVSNAVAHKSNVPVLVVK"
     gene            1110..2279
                     /locus_tag="VEJ68_04420"
     CDS             1110..2279
                     /locus_tag="VEJ68_04420"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HXX06049.1"
                     /translation="MNSPQLVYEQLKEVRQRKVAKMVKPATIIEPQYSVAKTVGIMVN
                     KDSYDVFCMNGKNVLTTNARELLGSRDIQNMCVLPLLHKIVPISKESTVEKAASIMSH
                     YRTRAVPVVEDGELLGVVKIEEIIQLLSQQNLRWIPASNILTSNPITVSGTESLAMAR
                     RIMMTKRIDHLPIIQSGKISHVLTTMHLLQLVKPEERIGRGLRGLNLERRFKSQIGNV
                     GSSRIPNCLTSASLNTVMESMLRNDASCCLLTLWDNLHGIITYKDLLGILESKIPNEV
                     PLFIVGLPQNIDNAGIIKEKFDKIIRNLRKVYPEVEEAKATIKTIHSPTSNRQHFEVT
                     VRVFTPYTIHNYTEQGWELSKIFDIIGGKVIRNLTKRRKNRWKTSIRRIDKKEIF"
BASE COUNT          849 a          437 c          422 g          711 t
ORIGIN      
        1 aagtaagttc tttggaaaca aggtatcgaa atctagtaga atccaaacta gaacccatgc
       61 ctattaccct atcagaatca aatccggttt ctttgagcac ctgataagta attatatcaa
      121 caggatttgt caccacaata attttagcat catcagcaaa ttttcttatg tctcttgaaa
      181 tttcttgaat tattggaaca ttgaacggta agagatctat tctttcagtt ttaatcgttc
      241 ctgcgcttgc agtaattata actatatctg atttttttat tttaaacatt tcatcggttc
      301 cagtaattga gactttagtc tttgctggca gtgcactcat aatatctaat gactccccaa
      361 tggccttgtt ttttggcttg ttaacgagaa caatatcatc taaagcttca gaagctaaaa
      421 gaaatgccag tgcagaacct acgcgcccag aacctataat tgagatcatg acacactatt
      481 tgactactag aaccggtaca tttgatttat gtgccacggc atttgatacg ctgccaagta
      541 atagttcttt aacaggagca agtcctcgcg aacctattac aataatatca aatctaaaat
      601 tttttgcaaa atcaagaatc tctgattttg catcaccgta agaaattttt cttttaaata
      661 ctatgccatt ttgtgcgcag agaagctctg ccttattcat tatttttttt gcatctccgt
      721 ataactttgc tctgattggt cctatcaaat cacccaagtt tctaggatag aatggcacca
      781 catatagtcc tgttattgtt ccctcgcatt gtcttgccaa gtaaattgct tcagatagag
      841 ctttgaagga gaaatttgaa ccatccaagg gaactagaat ctttttaatt tttgtcttaa
      901 gcacatctag gtttcttcca tgcctgattt aagattcgct gataatacca aacatgataa
      961 tgtgataatt atttaccaag gttgtaaaaa cacattcaat gtgacgacgt gattatcaaa
     1021 atcaaaaaac aagcatctct tttttataac cctaccaatt tacggacata tgaagatctt
     1081 atgagaatat taggaaagga atgtattaaa tgaattcacc tcaattagta tatgaacaat
     1141 taaaggaagt tcgtcagcgt aaggttgcaa aaatggtcaa acctgcaaca attatcgaac
     1201 cacaatactc agttgcaaaa actgtgggaa taatggtcaa caaagattct tacgatgtat
     1261 tctgtatgaa cggtaaaaat gtcctgacta caaacgcaag agaactattg ggatcaagag
     1321 acattcaaaa catgtgcgtt ttgccgttac tacacaagat tgtaccaata tcaaaagaaa
     1381 gtactgttga aaaggcagcc tcaatcatgt cgcattatag aacacgtgct gtccccgtag
     1441 tagaagatgg cgaactactt ggtgttgtta agattgaaga gataatccaa cttttaagtc
     1501 aacaaaatct gcgttggata cctgcaagta acatactgac ttcaaatcca attacggtta
     1561 gtggaacaga atctctagct atggcaagaa gaataatgat gacaaaaaga atagatcacc
     1621 ttccaataat tcagagtgga aaaatatcgc atgtcttgac caccatgcac cttttacaac
     1681 ttgtcaaacc cgaagaaaga attggaaggg gtttaagggg attgaatctt gaacgaaggt
     1741 tcaaatccca aataggaaat gttggaagta gtagaattcc aaattgtctt actagcgcat
     1801 ctctgaatac ggtaatggaa tcaatgttaa gaaatgatgc atcatgttgc ttacttacct
     1861 tatgggacaa cttgcatggg ataatcacct acaaagatct gctaggcata cttgaatcta
     1921 aaataccaaa tgaggttcct cttttcattg tgggtttgcc ccagaacata gataatgccg
     1981 gaatcataaa ggaaaaattt gataaaataa ttaggaacct acgtaaggta tatccagaag
     2041 tcgaagaggc gaaagccaca atcaagacca tacacagccc tacaagcaat agacaacact
     2101 ttgaagttac agtcagagtg tttacaccat atacaattca taattatacg gaacagggtt
     2161 gggaactctc taagatattt gacattattg gtggcaaagt gataagaaat cttacaaaaa
     2221 ggagaaagaa cagatggaag acttcaataa gaaggataga caaaaaagaa atcttctaga
     2281 tgaacaagta ttacatgaca tttaaacaag attatcggat ctaaacatta cgtgcaccaa
     2341 aagaaagttt tgatataaaa aatgattagg cctgagcata aactcaatta aggttattca
     2401 atttattcgt caacgccat
//
LOCUS       DASPUS010000185         3647 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1745289, whole genome shotgun sequence.
ACCESSION   DASPUS010000185 DASPUS010000000
VERSION     DASPUS010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3647)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3647
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1745289"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..759
                     /locus_tag="VEJ68_04425"
     CDS             <1..759
                     /locus_tag="VEJ68_04425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012216096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HXX06050.1"
                     /translation="LGQLVQRDLGYPQIGDTVKIKFKDQFGRDVLKRFTIVGISATAG
                     NQGNDNGVIINIDTLREIMNRPSQSSEIIVRLNDPSKASDVRDLFLSAFPSSADRFKA
                     QTIEEAAEVQLAGFRSGIALINLVGFFGMISSAFGVVTIQMMQVTSKTRDIGVMRAIG
                     SKRKDVLLVFIFQGIVIGAIGAAMGTCLAIGYTTYAKETHMTFNGSLALEVKYNWTGL
                     IQTDIMAFSLAIIASIYPAFKATKLQPVEAMRTG"
     gene            782..1450
                     /locus_tag="VEJ68_04430"
     CDS             782..1450
                     /locus_tag="VEJ68_04430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HXX06051.1"
                     /translation="MEKVYGEGDTAVRALENINFTIRRGEFVLIVGSSGSGKSTLLNM
                     IGLLDRPTTGKIILDGVDTSTLNDNQLSSFRNSKLGFIFQFSNLLSDLTVLENVLLPR
                     KIQGTEVSATEEAKNLLRTVGLESQLNKFGNKISGGQAQRVAITRALINKPALVLADE
                     PTGNLDSLSAETTVHLLKSLNRKLNQTFVVVTHDRPQFGQVDKIITIKDGKIVEGELE
                     ASVV"
     gene            1447..3096
                     /locus_tag="VEJ68_04435"
     CDS             1447..3096
                     /locus_tag="VEJ68_04435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06052.1"
                     /translation="MNYKVVILVVMFLVSQLVVPSYAQVSTIPPPGASSFEHGFTDIK
                     FLNAYFGYPNQKIEVQPGDQNVPFTILFSNVGTEDISGIRGLLSLPTGFTSATPLVEG
                     LIEADNSQVATAGSSFTLTFYVNVDKSLQIQNYDGTVKLTYTRVRENGLRQEFYDFSF
                     KVTGKSVLNIKAEDRFIQPASNNPIVVQISNNGTAPLNNVDITLPTQSNSTSTANLQN
                     VVIDHRHWNIGTIDAQSANTISFNIFVPPDLADQTLHIPFIVTYINSQGDQVTNSGVG
                     DLIVGPASTNFTVKLSTPSYVSMGIMQNLTLGIQNFSPSKISDISLTIVPSSSDLRIL
                     QDPRWFIQEIKPLEGTVLNIPVFAAQSIGNQAVNFDVNIQYTKEGTTVIEKQSFATYI
                     RPVIDVSVYGIQVSEIAGQKMIIGNVLNQGNIKGQFAIVTIEPLEGSTIKEATQYIGD
                     IDIDAPTPFNVPIQTTTGELSGDQKVLVTLTYKDTLLQSHTLTQFNTISLGTPIPSND
                     NSSQQLQLVILLAVAGGIGGIVFKIKKKSKIPMEKKVSQTG"
     gene            3129..3521
                     /locus_tag="VEJ68_04440"
     CDS             3129..3521
                     /locus_tag="VEJ68_04440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06053.1"
                     /translation="MTWDEIEVPKEVRPFMLQEAEQTNLGQKNGAMRQFRYGNLHIRE
                     YEDKYLVHVDKVDPRKDPLGHLLCDAPEFLVGIASGFLGGKKIASELYRLQKNSPLAK
                     GTSLIGGFLASIAIGYVGYSLAKKLKDF"
BASE COUNT         1253 a          675 c          687 g         1032 t
ORIGIN      
        1 ttgggtcaac tagttcagag agatctaggt tatccacaaa ttggcgatac tgtaaaaata
       61 aaatttaaag atcaatttgg aagagatgtt ctaaaaagat ttacaattgt tggaatttct
      121 gcaactgcag gcaatcaagg aaatgataac ggagtcataa tcaacattga tacgttgcga
      181 gaaattatga acagaccatc acaaagctca gaaattattg ttaggctaaa tgatccatca
      241 aaggcctcag atgttaggga tctctttctt agtgcattcc catcgagtgc agacagattc
      301 aaagctcaaa caatagaaga agcagcagag gtacaacttg cgggctttag atcaggaatt
      361 gctctaatta atttggtagg attttttgga atgatatcat ctgcctttgg tgtcgtaaca
      421 atccagatga tgcaagtaac aagtaagacg cgtgatattg gtgtaatgag agcaattggt
      481 tcaaaaagga aagatgttct tttggtattc atatttcaag gaatagtgat tggtgccata
      541 ggtgcagcta tgggcacgtg tttggcaatt ggttatacta catacgcaaa ggaaacccac
      601 atgacgttta atggaagtct agctttggaa gttaaataca actggacggg tctcattcaa
      661 actgatatca tggctttttc acttgctatt atagcatcaa tttatcctgc attcaaagcc
      721 acaaaactac aaccagtgga ggcaatgcga actggctgat aatgtcctag aagtgcatag
      781 cttggaaaag gtgtacggtg aaggcgatac tgctgtacgc gcattggaaa atatcaattt
      841 tacaatcaga aggggcgagt ttgtcttgat agtgggaagt tctggttctg gcaaatcaac
      901 tctgcttaac atgataggtc ttcttgacag accaacaact ggtaagatca tacttgatgg
      961 tgtagacact tcaactctta atgacaacca actttcatca tttaggaatt ctaaacttgg
     1021 attcatattc caattctcaa acttgttatc tgacttgacg gttttagaaa atgttcttct
     1081 accacgaaaa atccaaggca cagaagtgag tgctacagaa gaagcaaaaa atcttcttag
     1141 aactgtaggt cttgaatcac aacttaataa atttggaaac aaaatatcag gaggccaagc
     1201 tcaaagagtt gcaattacac gagctttgat aaacaaacca gcacttgtcc tagctgacga
     1261 accaaccgga aatctcgatt cactatccgc agagacaaca gtacaccttt taaaatcact
     1321 aaacagaaaa ctcaatcaaa cttttgttgt ggtaacacat gacagaccac aatttggtca
     1381 ggttgacaaa attattacta taaaagacgg caaaattgtg gaaggagaat tggaggctag
     1441 tgtagtatga attacaaggt tgttattcta gtcgtcatgt ttctagtaag tcaactagta
     1501 gtaccaagtt acgcgcaagt ttctacgata ccaccaccag gtgcaagctc atttgaacat
     1561 ggatttactg atatcaaatt tctcaacgct tactttggat atccaaatca aaagatcgaa
     1621 gtacagccag gagaccaaaa tgttccattt accatattgt tctcaaatgt aggtacagag
     1681 gatatttctg gaattcgagg actacttagt cttcctacgg gattcacatc tgctactcct
     1741 ttagttgagg gattaattga ggctgacaat tctcaagtag ccacagccgg tagttccttt
     1801 actcttacat tctatgtaaa cgtcgataaa tctctacaga tacaaaatta tgatggtact
     1861 gttaagctta catatacacg ggtaagagaa aatggccttc gtcaagaatt ctatgacttt
     1921 agttttaagg tcacaggaaa aagtgttcta aacataaaag cagaagatag attcatccaa
     1981 cctgcatcaa ataatccaat tgtagttcaa atatcaaata atggaacagc ccctctaaac
     2041 aatgtcgata tcacattacc tacgcaatcc aattctacta gtacagctaa tctacaaaat
     2101 gtcgtaatag accatcgtca ttggaatata ggtaccattg atgcccagtc agcaaataca
     2161 atctctttta acatttttgt tcctccagat cttgctgacc aaaccttaca cataccattc
     2221 attgttacat acattaattc tcagggagat caggtgacaa attccggagt aggtgacttg
     2281 attgtaggac ctgccagcac aaatttcact gtcaagctct caacaccatc ttatgtatca
     2341 atgggaatta tgcaaaattt aactcttgga atacagaatt tttctccatc taaaatctct
     2401 gatatttcac ttacaattgt tcctagttct tctgatctga gaattctaca ggatccaaga
     2461 tggtttatcc aagaaataaa accactcgag ggtactgtat tgaatatacc agtatttgct
     2521 gcccaaagca tcggaaatca ggctgttaac tttgatgtaa acatacagta tacaaaagaa
     2581 ggtactacag ttattgaaaa acaaagcttt gctacttata tcaggccagt aatcgatgtc
     2641 tcagtttatg gtattcaagt atcagagatt gctggacaaa aaatgatcat aggaaatgta
     2701 ctcaatcaag gaaatatcaa gggacaattt gctattgtta caattgaacc attagagggc
     2761 tcaaccataa aggaagcaac acagtatatt ggtgatattg atattgatgc ccctactcct
     2821 tttaatgtgc caatacaaac aacaacggga gagctgtcgg gagaccaaaa agttctggta
     2881 acacttacct acaaagacac attactacaa tctcatactt taacacaatt taatacaata
     2941 tcacttggaa cacctatccc atccaatgac aactcttcac aacaattgca actagtgatt
     3001 ctccttgccg tagctggcgg aattggagga atagtcttta agataaagaa gaaatccaag
     3061 attcctatgg agaagaaagt atcacaaacg ggctaaagtt attatttaga gaagacaggt
     3121 ttttgaatat gacttgggat gaaatcgaag tcccaaaaga agttcgcccc tttatgctgc
     3181 aagaggcaga acaaactaac ttgggtcaaa aaaatggagc tatgcgacaa tttcgatatg
     3241 gtaatctaca catcagagaa tatgaagaca aatatctcgt acatgtagac aaggttgatc
     3301 ctcgaaaaga ccctcttggg catctacttt gcgatgctcc ggaatttctt gtaggaattg
     3361 ctagcggatt tttgggtgga aaaaaaatag catctgaact ttataggtta caaaaaaatt
     3421 cacctcttgc aaaaggaaca tctcttattg gaggtttctt ggcatcaatt gctattggat
     3481 atgtcggata ttctcttgca aaaaagctaa aggatttcta aggaggaaac tgacattaca
     3541 aaaattcgaa cagctaaaac ctttctcaca cttttaccac ttgtactagc tttacgaaaa
     3601 gatagaagag aatgggtaaa aaaacaaggg aaaaatgtta atctaaa
//
LOCUS       DASPUS010000186         2480 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_98364, whole genome shotgun sequence.
ACCESSION   DASPUS010000186 DASPUS010000000
VERSION     DASPUS010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2480)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2480
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98364"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..626
                     /locus_tag="VEJ68_04445"
     CDS             <1..626
                     /locus_tag="VEJ68_04445"
                     /inference="COORDINATES: protein motif:HMM:NF015113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HXX06054.1"
                     /translation="VHGDDKGLVLPPRVAPIQIVIVPIYYSPTDRESIINKANEIAEI
                     LKKQNLRIHVDGRDEFTPGYKFNDWEMKGVPLRIEIGPKDLAKGKMVLVRRDISKKSD
                     IPFGETEVGIMSVLDDIQKNLYNNAKKILNERTKNVSEFEEFKKELDNGFFLYSPWCG
                     DQKCEETIKETTGADIRVIPFDNKKSNLPCIICKKPSITDAIFARGY"
     gene            complement(710..1204)
                     /locus_tag="VEJ68_04450"
     CDS             complement(710..1204)
                     /locus_tag="VEJ68_04450"
                     /inference="COORDINATES: protein motif:HMM:NF024864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HXX06055.1"
                     /translation="MVKKQKNKAKSSPISRGTIIFIAIVVAAAGGGIYYFISTSTPVN
                     STVPVFSPASNVYILGIHDPNQGYVYDQESTRQGKRTVSSGVIDSSIHLQKGTLVALH
                     FINEDKDTNTQMDLNIDAFNVHTKPLSYFQAQTITFIADKDGTYSYYSTLHPEMKGSI
                     TVDP"
     gene            1304..>2480
                     /locus_tag="VEJ68_04455"
     CDS             1304..>2480
                     /locus_tag="VEJ68_04455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HXX06056.1"
                     /translation="MKKLEIILIGVIIALSVTVIVQFSNGRSLSDLSQATIQPPSGST
                     NTPEQTSPTTPQEQAPTSPDPATSTTLPSESSSLSEIFKNAENSVVQITSKVATVDNT
                     IIINGQPLESQSTRLGSGFVYDKEGYIITNNHVVEGTKTVNVTFIDGNTYSAKVVGTD
                     PDNDLAVIKITDNFSDENLVPLAIGDSSKLEVGQQIIAIGNPFGLSDSMTTGIVSALG
                     RLLPNQNVGFSIPDIIQVDAAINPGNSGGPLLNLQGQVVGISTAISTSTGDFSGVGFA
                     IPSNSIERIVPILIKYGSYQHPFLGISGRTMDSDVAIANGLPNNFKGIMVVNVVSGGP
                     ADKAGIHAATLDNNNIPHGGDIITAIDNHPMKTIYDVIAYLDDEKSVGDKVVLTVDRA
                     "
BASE COUNT          813 a          444 c          481 g          742 t
ORIGIN      
        1 tggtacatgg tgatgacaaa ggactagtcc ttccacctcg tgtagctcca attcaaattg
       61 ttattgtacc aatctattat tccccaactg acagagaatc aatcataaac aaggcaaatg
      121 aaattgcgga aattctaaag aaacaaaacc taagaataca cgtagatggg agagacgagt
      181 ttactccagg ttacaaattc aatgattggg agatgaaggg agtgcctctc aggattgaga
      241 taggcccaaa ggatctagca aaaggaaaga tggtgcttgt aagacgagac atttccaaga
      301 aatctgacat tccatttggt gaaacagagg taggcattat gtctgtatta gatgatattc
      361 aaaaaaatct ttacaacaat gcaaaaaaaa tcttgaatga gagaacaaaa aatgtcagcg
      421 aattcgaaga gttcaaaaaa gagcttgata atggattttt tctttactct ccatggtgtg
      481 gagatcaaaa atgtgaagag acaattaaag aaacaactgg tgcagacatc agagtcattc
      541 cgtttgacaa caaaaaatca aacttacctt gcataatatg taaaaagccc agtataacag
      601 atgccatatt tgccagaggt tactagaccg acttcactat gaattcataa tcaagaaaat
      661 tttcatattc tagataatga ttgtcgtatt gcgctgaact aaaccgctct tatggatcga
      721 cagttattga acctttcatc tcaggatgca atgtggaata gtaactgtat gtcccatctt
      781 tatcagctat gaaagttata gtttgagctt gaaagtaact caatggtttt gtgtgtacat
      841 tgaatgcgtc gatattaaga tccatttgtg tattggtatc tttgtcttca tttatgaaat
      901 ggagtgcaac tagagttcct ttttgaagat ggatagaaga atcaattaca ccgcttgaaa
      961 ctgttctctt tccttgtcgt gttgattcct gatcatacac gtatccctga ttaggatcgt
     1021 gaattcctag aatgtagacg ttggaagctg gactaaaaac tggcacggtg ctgtttactg
     1081 gtgttgaagt agaaatgaaa tagtatattc ctcctccagc agctgctact acaattgcta
     1141 tgaatattat agtaccacgt gaaattggcg agctttttgc cttgttcttc tgcttcttta
     1201 ccactatgaa attagtgttt tatgtctata tttatgttca gatggataaa agattcgtaa
     1261 agaatattat tttgatttgt tctttttact aataatataa agcatgaaaa aattagaaat
     1321 tatccttatt ggagtaatta tagctctttc tgtcacagta attgtccaat tttccaatgg
     1381 gcgatcattg agtgatttat cacaagcaac tattcaaccc ccatctggat ctaccaatac
     1441 accggaacag actagtccca caacaccaca agaacaagca ccaacttcgc ctgatcctgc
     1501 tacctccaca acactacctt cggaatcttc tagtcttagc gaaatcttca aaaatgctga
     1561 aaattcagta gtccaaatta ctagtaaggt tgcaactgta gacaacacca taatcattaa
     1621 tggccaaccg ttggagagcc aatctactag acttggttca ggttttgtat atgacaagga
     1681 aggttacata attaccaata atcatgttgt agaaggtaca aaaactgtaa atgttacatt
     1741 tatcgacgga aatacatatt cagcaaaagt agtcggaact gatcctgata acgatttagc
     1801 cgtgattaaa ataacagata atttttctga tgaaaatttg gtccctctag ccattggtga
     1861 ttcttccaag cttgaggtag gtcaacagat catagcaatt ggaaacccct ttggtctgag
     1921 tgattctatg acaactggta tagtaagtgc ccttggacgt ttattaccaa atcaaaatgt
     1981 tggattttcc attccggata ttattcaagt agatgctgcg attaatcctg gcaattctgg
     2041 agggccttta ttgaatttgc aaggtcaagt tgttggcata agcactgcca tttcaacaag
     2101 tactggtgat ttttcaggag taggatttgc cattccctct aattccatcg agagaattgt
     2161 tccaatttta attaaatatg gatcctatca acatccattc ttggggatat ctggaaggac
     2221 aatggattca gatgttgcaa tagcaaatgg tttacctaac aacttcaagg gaataatggt
     2281 tgtcaacgtg gtaagcggag gacctgcaga taaagctggc attcatgccg caaccctgga
     2341 taacaataac atcccgcatg gaggagacat cataacagca atagataatc atcctatgaa
     2401 gacaatctat gatgtcatag catatcttga tgacgagaaa tctgttggtg acaaggtagt
     2461 attaacggtg gacagagcag
//
LOCUS       DASPUS010000187         5035 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_372334, whole genome shotgun sequence.
ACCESSION   DASPUS010000187 DASPUS010000000
VERSION     DASPUS010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5035)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5035
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372334"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1557)
                     /locus_tag="VEJ68_04460"
     CDS             complement(<1..1557)
                     /locus_tag="VEJ68_04460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008301060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HXX06057.1"
                     /translation="MVNSIEYDLLIVGSGLAGLRAAIQAAKTAPSIKIAVIAKTQVMR
                     SHSVSAEGGTAAVLYPEDGDTIESHVYDTVKGSDFLGDQDVIEKLVSEMPNEVYQMEH
                     WGMPWSRRDDGRIGQRNFGGYSFPRATYAQDKVGFYEMQTLYDTCQKFDNIEFYNEWF
                     VTSIIHDNQKFCGITAIELSSGTFYTFKAKGLIIATGGAGRVYSFSTYALSSTPDGID
                     MAYRAGMALKDMEFVQFHPTGILPSGILITEGARGEGGYLLNKGGERFMKKYAPSKLE
                     LASRDVVSRAMITEINEGRGFKHETGVDCLKLDLRHLGKELIISKLPAIREISLKFSG
                     IDPSNEPIDVRPVCHYMMGGIHTNIEGATEIQGIWAAGEGACNSVHGANRLGANSTAE
                     CLVWGKITGELAAKYVMDSTSPSQFPLHLVATEEKRIYDGIFRGSGSANPYEVRQELT
                     DTMNQKAYVFRTEKDLVDGLKKVRELRQKTWKHVDDKAKEYNTNFTNVMELDSMFRVA
                     EVILMGAIWRK"
     gene            1697..2206
                     /locus_tag="VEJ68_04465"
     CDS             1697..2206
                     /locus_tag="VEJ68_04465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HXX06058.1"
                     /translation="MISEWVQRVGSSVPRGFSRYFILEVLKKNPSTGKEIIDFAIAQS
                     DGKWKPSPGLIYPLLGRLLDEGLVEETKDGKYQITKRGRIVSEDLETLDRIIKNQLDV
                     IFRVGNVGKFVAMDLLERVTSIGNSLSSNIAHMTKDETLKYKRFLESELKKIENSEKK
                     SLGKEIQVD"
     gene            2260..3102
                     /locus_tag="VEJ68_04470"
     CDS             2260..3102
                     /locus_tag="VEJ68_04470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HXX06059.1"
                     /translation="MYDKSKPLVFPGVYDAITARIAQKAGFEAMFQTGYGTSATLLGM
                     PDYGFIGPTETIENARRICKSVSVPVIVDADTGYGNPLSVWKLVNELESVGASGIFLE
                     DQKWPKRCGHMSGKEVIAKEEYVEKLRAAVDARKSKEFVIVARTDARASEGLDAAIKR
                     GLLYKEIGADAIFIEAPKSVEEMKKIGKAIKAPLVANMIEGGATPLLSSQMLHKMGFN
                     LILYPLSVLYANTFATLQILKELKKNGTTSKLKNNLVNFNQFNEIVELSKFKKMEHKY
                     TTKS"
     gene            complement(3141..3425)
                     /locus_tag="VEJ68_04475"
     CDS             complement(3141..3425)
                     /locus_tag="VEJ68_04475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HXX06060.1"
                     /translation="MSESRETIFIGKKPLMAYVTSTLIQLANQPKISIKARGLSIGRA
                     VDVAQIIARKTENAGYSIGNIKIGSEQLQSQDGRQRNVSTIEIEVKRNSS"
     gene            3480..3887
                     /locus_tag="VEJ68_04480"
     CDS             3480..3887
                     /locus_tag="VEJ68_04480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06061.1"
                     /translation="MKIFLLFIFIFTLIGINYAYGYGEVSATDFRVVNSLGEDIKSPV
                     VEQQLNLQMSLKNISTQNTDWAYIVQIIDANGAIVDLNYATGSLVNNQTLTAALSWTP
                     HISGTYKIETFIWDNLRDIDPLAPMTTSTITVT"
     gene            complement(3899..3972)
                     /locus_tag="VEJ68_04485"
     tRNA            complement(3899..3972)
                     /locus_tag="VEJ68_04485"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3936..3938),aa:Ala,seq:ggc)
     gene            4102..4941
                     /locus_tag="VEJ68_04490"
     CDS             4102..4941
                     /locus_tag="VEJ68_04490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008301132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HXX06062.1"
                     /translation="MVVESKAIVSYVQIQKEDLAVFRFIAKEGELPQYKSGQFITLGA
                     HVAAENKIIRRAYSIASHPENRKYIELYIRWVRKPLPGRLTTVLFSSKEGDEISWVKP
                     TGAFTIEEKKPNGEPDNRRIVCLGGGTGLAPFVSFARHLHDTGSKREIVVLHGASYVD
                     ELGYREELTRLEEESLDRGKDKWNFRYRAAVSRPDEWFNRTWNGQKGRVETFLQSKDG
                     DMSTLEKLVGEKITKDNTVFFICGWQGTIDGCLDVLTPKGFVTERNKRADKSFEIKYE
                     SYG"
BASE COUNT         1566 a          941 c          994 g         1534 t
ORIGIN      
        1 ttttctccag attgcaccca tcagaatcac ttcagcaact cgaaacatgg aatctagttc
       61 catcacgttt gtaaagttgg tattatactc tttagcttta tcgtcgacat gtttccaagt
      121 cttttgtctt aattctctga ctttttttag accgtcaaca agatcttttt cagttctgaa
      181 aacatatgcc ttttgattca ttgtatcggt tagctcttgt cttacctcat atggatttgc
      241 actcccgcta ccacgaaaaa taccatcata gattcttttt tcctcagttg caacaagatg
      301 taatggaaat tgtgaaggtg atgtactatc cattacatat ttagccgcaa gctctcctgt
      361 aattttaccc caaactaaac actctgcagt agaatttgct cccaatctgt ttgcaccgtg
      421 aacactgtta caggcgcctt cacctgctgc ccatatacct tggatttccg ttgcgccttc
      481 tatgttagtg tgaatacctc ccatcatata gtgacaaact ggccgaacat ctattggttc
      541 attagatgga tctattcctg aaaattttag agagatctct cttattgctg gaagcttgct
      601 gataatgagt tcctttccaa gatgtctcaa atccagtttt agacaatcta caccagtttc
      661 atgtttaaaa cctcgacctt cattaatttc agtaatcatg gcacgtgata caacatctct
      721 tgacgcaagc tctagcttgc ttggtgcata ttttttcata aaccgttcac cgcctttgtt
      781 aagaagataa cctccctcac ctcttgctcc ttctgtaatt agaattcctg atggtaaaat
      841 tccagtcgga tgaaattgta caaattccat gtcctttaaa gccattccag ctctgtatgc
      901 catatctatt ccatctggag ttgaagatag tgcataagta gaaaaactgt acactcgtcc
      961 tgcaccaccc gtagcaataa tcaatccttt agctttgaag gtgtagaaag ttccgcttga
     1021 aagctcaatt gcggtaatgc cacaaaattt ctgattatcg tgaattattg atgttacaaa
     1081 ccattcattg taaaattcta tgttatcgaa tttttgacat gtgtcgtata acgtttgcat
     1141 ttcatagaat cctactttgt cctgagcata tgtagcccta ggaaagctgt atcctccaaa
     1201 gttcctttga ccaattcttc catcatctct tcgtgaccaa ggcattcccc agtgctccat
     1261 ttggtatact tcgttaggca tttcgcttac cagtttttca ataacatcct gatcaccaag
     1321 aaagtcgctt cctttaacag tgtcataaac atgtgattct atagtgtcgc catcttccgg
     1381 gtagagaact gcagcagtac cgccttcagc agaaacagaa tgtgaacgca ttacttgtgt
     1441 ttttgcaatc acagctattt tgatcgaggg tgcagttttg gctgcttgaa ttgctgctct
     1501 tagcccagca aggccagagc ctacgatcaa aagatcgtat tcaatgctat ttaccattat
     1561 tcgacatctt ccttttcagc cttcataaat atgtcttatg agaaagatct atgaactctt
     1621 gttcgagttt tgctgcggag ccgtctgaat aacttgttcg aatcattaat atatatcgct
     1681 agtgatatca ctagtgatga tttcagagtg ggttcagaga gtaggaagtt cagtaccccg
     1741 tggattttcc agatatttca ttttagaggt tttaaaaaag aacccgagca ctggtaaaga
     1801 aataattgat tttgcgattg cacaaagtga tggaaagtgg aagccatcac ctggtctaat
     1861 ctatcctcta cttggacgac ttttagatga aggacttgta gaggaaacca aggatggcaa
     1921 atatcagatt actaagagag gaaggatagt ttcagaagat ctagagacct tagacaggat
     1981 aataaaaaat caattagatg ttatttttag ggttggcaat gttggtaaat ttgtggccat
     2041 ggatctttta gaacgtgtaa cttccatagg taattctctt agttcaaaca tagcacatat
     2101 gactaaggat gagactttaa aatacaaaag attcctcgag tcagagttaa aaaagatcga
     2161 aaactccgaa aaaaaatccc tgggcaaaga aatccaagtg gactaacaat aaataattgt
     2221 aaaacggtat agcgacagtt gaaaggcatt agaaaattag tgtatgataa atcaaaacct
     2281 cttgtttttc ctggagttta tgatgcaatt actgcaagaa tagctcaaaa ggctggattt
     2341 gaagcaatgt ttcagacggg ctatggcact tcagctacct tacttggtat gcctgattat
     2401 ggtttcattg gacccactga aactattgaa aatgccagaa ggatatgcaa atctgtatca
     2461 gttccagtca tagttgatgc cgatactggt tatggtaacc ccctaagtgt atggaaactt
     2521 gttaatgaat tagaatcggt aggtgcttca ggaattttcc ttgaagatca gaaatggcct
     2581 aaaagatgcg gtcacatgtc tggcaaagaa gttattgcaa aagaagaata tgtggaaaag
     2641 cttcgtgcag cagttgatgc cagaaagagc aaggaattcg tcatagtggc aagaaccgat
     2701 gctcgagcaa gtgagggatt ggatgctgca atcaaacgtg gattgttgta taaggagata
     2761 ggcgctgatg ccatcttcat tgaagcacca aaatcggttg aggaaatgaa gaaaatagga
     2821 aaagccatca aagcaccatt agtagccaac atgatagaag gcggagctac accattgctt
     2881 tcttctcaaa tgctgcacaa aatgggattc aatcttattt tgtatccact ttcggtacta
     2941 tatgcaaata cgtttgccac tcttcaaatt ctcaaagagt taaaaaagaa tggtactacc
     3001 tctaaactaa aaaacaatct tgttaatttc aatcaattta atgaaattgt tgagttatca
     3061 aagtttaaaa aaatggaaca caagtatact acaaaatcat agataaaaac aaaaaagaga
     3121 gatttctctc aaggttctag ttaggaactg tttctcttta cttctatttc tatagtagaa
     3181 acattccttt ggcgtccatc ctgtgattga agttgttctg atccaatctt gatgtttcct
     3241 attgagtaac cagcattttc tgttttacgt gctataatct gtgcaacatc tactgcacgc
     3301 ccaatgctga gtcctcttgc cttgatagat atttttggtt ggtttgccaa ctgtatgagc
     3361 gtagaagtaa catacgccat cagaggcttc tttcctatga agatagtttc tctagattcg
     3421 gacatgcggg ccctttcttc ttgggataat ttaaatctaa gaatagaaga attgttgcaa
     3481 tgaagatctt tcttttgttt attttcattt ttactttaat tggaattaat tatgcatatg
     3541 gatatggcga agtttcagcg acagatttta gggtagtcaa ttctcttgga gaagatatca
     3601 aatcccctgt agtagaacag caacttaact tacaaatgtc tctgaaaaat attagtacac
     3661 aaaatactga ttgggcgtac atagttcaaa taattgatgc aaatggggcc atagttgatc
     3721 tgaattatgc cacaggttct cttgttaaca accaaactct tactgctgct ctttcgtgga
     3781 caccacacat tagtggaacg tataaaattg agacattcat ctgggataat ttgcgagata
     3841 tagatccgct tgctcccatg acaacttcta ctataacagt aacttgattt gtaaaaagtg
     3901 gaccgggtgg gatttgaacc cacgatctca cccatgccaa gggcgtatcc tactaggcta
     3961 gacgaccggc ccgattcaat cagaatgtga atctgattcg cattaacttt ttttgtgcag
     4021 ttattaacgt ttagtgcaaa cagaaaatta gcttgaccaa aataacataa gatatttaaa
     4081 cttcgaaatt gaactttttc cgtggtagta gaaagcaaag caatagtttc atacgttcaa
     4141 attcaaaaag aagatttggc agttttcaga tttattgcaa aagaaggaga attgccacaa
     4201 tacaaatcag gtcaattcat aacgttagga gctcacgtag cagctgaaaa taagattata
     4261 cgaagagcat actcaattgc atcacatcca gaaaacagaa agtacatcga gctttacata
     4321 agatgggtta gaaaaccact tcctggtcgt cttaccacag ttttgtttag ttcaaaggaa
     4381 ggtgatgaga tctcttgggt aaagcctaca ggtgccttta ctatagaaga aaagaaacca
     4441 aacggtgaac ctgacaatag aagaatagta tgtcttggag gaggtactgg tttagcacca
     4501 tttgttagtt ttgcgcgtca tcttcacgat acaggtagca agagagagat tgtagtctta
     4561 catggtgcaa gttatgtaga cgaacttgga tacagagaag agcttactcg ccttgaagag
     4621 gaaagtctgg atcgtggcaa agacaagtgg aatttcagat atagagcagc agtgagtaga
     4681 cctgatgagt ggttcaatag aacatggaat ggacaaaaag gaagagttga gactttcttg
     4741 cagtcaaaag atggagatat gtctactctt gaaaaactag ttggagagaa aatcaccaaa
     4801 gataatacag tgttcttcat ttgtggttgg caaggaacaa tagatggctg tcttgatgtg
     4861 ttaacaccaa agggatttgt tactgaaaga aacaaacgag cagacaagag ttttgaaata
     4921 aaatacgagt cctacggata gcccaattca tttgaaaaga taatattcta ttgtcatagg
     4981 catgtgtacg gggacgtagg ttagcttggt agactgccag cctcgggcgc tggat
//
LOCUS       DASPUS010000188         2281 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1601017, whole genome shotgun sequence.
ACCESSION   DASPUS010000188 DASPUS010000000
VERSION     DASPUS010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2281)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2281
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1601017"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1107)
                     /gene="proS"
                     /locus_tag="VEJ68_04495"
     CDS             complement(<1..1107)
                     /gene="proS"
                     /locus_tag="VEJ68_04495"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HXX06063.1"
                     /translation="MSKEIGITVKKNEDFSEWYTQVVLKAHLTDYAPVKGLIVLRPYG
                     YSIWESLKSSLDSKLKSTGHENAFLPVLIPESLLSKEAEHFAGFTPEVFWVTHSGNTE
                     VGDRLGLRPTSETLAYSMYSKWIKSWRDLPLKINFWNSALRAEIKSTKPFLRTSEFLW
                     QEGHTVHMTKEEAEEEVMTILQIYKKTVEEELAIPVIIGKKSEKEKFVGAVYTTTMES
                     IMPDGKALQMGTSHFLGQNFSKPFDVKYLDKENVETFAWQTSWGVSWRLIGALVLVHG
                     DDKGLVLPPRVAPIQIVIVPIYYSPTDRESIINKANEIAEILKKQNLRIHVDGRDEFT
                     PGYKFNDWEMKGVPLRIEIGPKDLAKGKMVLVRRD"
     gene            complement(1146..1433)
                     /locus_tag="VEJ68_04500"
     CDS             complement(1146..1433)
                     /locus_tag="VEJ68_04500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06064.1"
                     /translation="MSELPHKYEVTIKAASGPQKLSDQTKEELKASGMMDDKGKLKLK
                     GVSPKMLKRMKEESVDCPVLKKEVPFIQCFVCSNFQSRITGKVLCKGDPLK"
     gene            1535..2185
                     /gene="serB"
                     /locus_tag="VEJ68_04505"
     CDS             1535..2185
                     /gene="serB"
                     /locus_tag="VEJ68_04505"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HXX06065.1"
                     /translation="MLAIFDVEGVLLDAEFLPILAEKINKQDEIWDITRKGIEGVINW
                     EEGLKKRIEILRGISFETCKEVADSLTIMTGAKEACTALKSAGWKLMAVSGGFSIMTD
                     KLKDYLGLDYVFSNELLFKNGKLDGVKINVNSDKAKSAIIKIKEWNEERRDIVVVVDG
                     ANDIKLFDICGLGVAFRAQDIVKDLATVTLEEKDLSKLVDIINNHYGTEIELQTFA"
BASE COUNT          685 a          418 c          441 g          737 t
ORIGIN      
        1 gtctcgtctt acaagcacca tctttccttt tgctagatcc tttgggccta tctcaattct
       61 gagaggcact cctttcatct cccaatcatt gaatttgtaa cctggagtaa actcatctct
      121 tccatctaca tgtattctta ggttttgttt ctttagaatt tcagcaattt cgtttgcctt
      181 gtttatgatt gattctctgt cagttggaga ataatagatt ggcacaataa caatttgaat
      241 tggagctaca cgaggtggaa ggactagtcc tttgtcatca ccatgtacca acaccagagc
      301 gccaataaga cgccaagata caccccatga ggtttgccag gcaaaagttt caacattttc
      361 tttatcaaga tactttacat caaacggttt tgagaagttt tgaccaagaa aatgggaggt
      421 gcccatttgt aatgctttac catctggcat gatggattcc atggtggttg tatatacagc
      481 acctacgaat ttttccttct cgctcttttt tcctattatt acgggtatag caagttcttc
      541 ctccaccgtt tttttataaa tctgaaggat tgtcatgact tcctcctcag cttcctcttt
      601 tgtcatgtga acagtatgtc cttcttgcca caaaaattcg gaggttcgca aaaatggttt
      661 tgttgatttt atctcagctc ttaaagcaga gttccaaaaa tttatcttga gtggcagatc
      721 cctccaactt tttatccatt tagaatacat gctgtatgca agagtctcgg aagtaggtct
      781 taatccaagc ctatccccca cctctgtatt accagagtga gttacccaaa aaacctctgg
      841 ggtaaatcct gcaaaatgtt ctgcctcctt actcaacaat gattcgggaa tgagaacagg
      901 aagaaaggca ttttcatgcc ctgtggattt taatttacta tcaagtgatg acttgagaga
      961 ttcccatatg gaatatccat atggcctcaa aacaattagt cctttgactg gtgcataatc
     1021 ggtaagatgt gcttttagca caacctgagt ataccattcg ctaaaatcct catttttctt
     1081 tactgtgatt cctatctctt tgctcaattt acatcatttt agactatgga ctaatgagct
     1141 ttctgttatt ttagagggtc gcctttacaa agtacttttc cagttattct actttgaaaa
     1201 ttagaacaaa caaagcattg gataaaggga acttcttttt tcaaaacagg acaatcaaca
     1261 gattcttctt tcatacgttt gagcatcttc ggactgactc cctttagctt caatttgcct
     1321 ttgtcatcca tcatgccaga tgccttcagt tcttcttttg tttggtctga taatttctga
     1381 ggtcctgaag ctgcttttat tgtaacttca tatttgtgag gaagttcgct cattgacatc
     1441 aatttggatt gcttgaatat attgctaatg gtaacaagat ttgtagatcg cttaagatta
     1501 atataatctg ctttcaggat gaaaacagaa actgatgcta gctatttttg atgtagaagg
     1561 tgtacttctt gacgcagaat tccttcccat attggctgaa aaaataaaca aacaagatga
     1621 aatctgggat ataactagaa aaggaattga gggtgtaata aattgggaag aaggtctgaa
     1681 gaagaggatc gaaatactga gaggaataag ctttgaaact tgcaaggaag ttgcagactc
     1741 gcttactata atgactggtg caaaagaggc atgtactgct ctaaaatctg cgggctggaa
     1801 actgatggca gtgtctggag gattctcaat tatgactgac aagttgaaag actatctggg
     1861 tctagattac gtattttcta atgagttgtt attcaaaaat ggtaaacttg atggtgtaaa
     1921 aatcaatgtg aactctgata aagccaaatc tgcaataatt aagataaaag aatggaatga
     1981 ggaacgaagg gacattgttg tagtggtaga tggagcaaac gacataaagt tgtttgatat
     2041 ctgtggacta ggggtggcat ttagagcaca agatattgtc aaggacttgg ctactgtcac
     2101 acttgaggaa aaagatcttt caaaactcgt agatataatc aataaccact atggaacaga
     2161 aatagaattg caaacatttg cctagaagat atttttaaac agatatctga tactaattca
     2221 aatgactgtg gaaatcattc cgattaaaat tgagaaggaa gtagggcccg ccgatgatat
     2281 a
//
LOCUS       DASPUS010000189         2291 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1197370, whole genome shotgun sequence.
ACCESSION   DASPUS010000189 DASPUS010000000
VERSION     DASPUS010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2291)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1197370"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..898
                     /locus_tag="VEJ68_04510"
     CDS             <1..898
                     /locus_tag="VEJ68_04510"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RNA-guided pseudouridylation complex
                     pseudouridine synthase subunit Cbf5"
                     /protein_id="HXX06066.1"
                     /translation="NYGFIILDKPNGPTSHETVAWVKKILNIPKAGHSGTLDPQVSGI
                     LPIGFGEATKALIVLLLGPKEYHSLGRLHSLPQQDKLNQVLNLLTGKIYQKPPQRSAV
                     SRQTRVRTVYEIEVVEQVERLLLLRILCEAGTYVRKIFYDMGEILGPGATMIELRRTR
                     VGQFNEDSNLVKMHDLVDAYAIWKEKNDDSKLKRILMPIELALSEIKSVVIRDSAVDA
                     LCHGAQLAIPGVLEFSHGLKRGDFVGIYTQKGEVVALAEAIMSEDEIAENTKGFAFKI
                     KRIIMAPNTYPKSWRSKAVINN"
     gene            926..1375
                     /locus_tag="VEJ68_04515"
     CDS             926..1375
                     /locus_tag="VEJ68_04515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06067.1"
                     /translation="MIPKGATIFTIVGVLGAGILGIYLSEISNQLPILVYQNGPSLTV
                     IPDKINYHLGESVHIRIINSGTTTLTFSDSSYGFKILALDGTIIYSPISAQVISTLEP
                     KEEKTFAWNQTKTSGTKVFEGRYQITSSTISDTGNMLTKSVTINIVQ"
     gene            1459..2169
                     /locus_tag="VEJ68_04520"
     CDS             1459..2169
                     /locus_tag="VEJ68_04520"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HXX06068.1"
                     /translation="MGLKPSASMKEIKEAYRELALKYHPDKNSSGNDDTKFKQISEAY
                     RTLQSRRKTDSKITKKFSDIYPEEAVSLYHEAETLIAKKKYDEAIVFYDKALELLPHY
                     TEALLKKADVLSHLKRYEEALVCYDKVLQINPDSVDVWNLKGVCLSDLKRYEEALDCF
                     DEAILSNPLDYASWNFIGVCYFNLGKLEKALECFDKSTKIRPEFAVAWLNKGGVLSRL
                     DKKKEAEKCYEKAKKLRQ"
BASE COUNT          801 a          396 c          470 g          624 t
ORIGIN      
        1 aaactatgga ttcataattc ttgacaagcc aaacggccca acaagtcatg agactgttgc
       61 atgggtaaaa aaaattctta acattccaaa agcaggacac agcggaaccc tagacccgca
      121 ggtatccgga attttaccaa tcggttttgg tgaggcaact aaagccttga ttgttctttt
      181 gcttggtcca aaagaatacc attcactagg acggctgcat tccttgccac aacaggacaa
      241 actcaatcaa gtgctcaatc tattgacagg aaagatatac caaaaacctc cacagagatc
      301 agctgtatcg cgtcaaacga gagtacgaac agtatacgaa atagaagtgg tggaacaagt
      361 agagaggctt ttactattgc gtatcttgtg tgaggctgga acatatgtta gaaaaatttt
      421 ctatgatatg ggagaaattt taggtcctgg tgccacaatg attgaactac gcagaaccag
      481 agtgggtcag ttcaatgagg actcgaatct agtaaagatg catgatttgg tagatgcata
      541 tgctatatgg aaagaaaaaa acgatgattc aaagctaaaa agaatattga tgccaattga
      601 gcttgctttg agcgagataa aatccgttgt gataagagat tctgcagtag atgcattatg
      661 tcatggcgca cagcttgcaa tccccggtgt actggaattt tcacacggtc taaaacgagg
      721 cgatttcgta ggaatctata cccaaaaagg cgaggttgtg gcccttgcag aagcgataat
      781 gtcagaagac gagattgcag agaacacaaa aggatttgca tttaagatta agagaatcat
      841 catggcacca aatacatatc cgaagagctg gcgctcaaag gcagttatta acaattaaaa
      901 aggaatcaaa attacctttt gaaagttgat cccaaaagga gctacgatat ttactatagt
      961 gggtgttctt ggtgcgggaa ttttgggaat ttatctttca gagatatcaa accagttgcc
     1021 aattcttgtt tatcagaacg ggccatcact tactgtcata ccagacaaaa ttaactatca
     1081 tcttggagaa tcagttcata tcagaataat aaattcagga accaccactc ttactttttc
     1141 tgattcctcg tacggtttta aaattttagc actagatgga actatcatat attcaccaat
     1201 ttctgcccag gtaatctcta ccttggaacc aaaagaagaa aaaacatttg cctggaatca
     1261 gacaaaaaca agtggcacca aagtctttga gggaagatat cagattactt ctagtacaat
     1321 ttctgatacg ggtaatatgt tgacaaaatc agtcacaatc aatattgtac aataatcttt
     1381 gatttacaca agaaagactt agttgaccat attttgatta taccataaga attgaacatt
     1441 tctcagtgct atgaaatctt gggactaaaa ccaagtgcat ctatgaagga gataaaagaa
     1501 gcatataggg aacttgctct gaaataccat cctgacaaaa actcctcagg aaatgatgat
     1561 acaaaattta aacaaatctc agaggcatat cgaactctac aatctagacg caagacggat
     1621 tcaaaaataa caaaaaaatt ttctgatatc tatcctgaag aggcagtatc attataccac
     1681 gaagctgaaa cgttaattgc taagaaaaaa tatgatgagg caattgtatt ttatgacaag
     1741 gcattagaac tattaccaca ttataccgaa gccttgctca aaaaggcaga tgtattatct
     1801 catctgaaaa gatatgaaga agcactagtg tgttatgaca aggttttaca gataaatcct
     1861 gattctgtag atgtttggaa tctaaaaggt gtctgtcttt ctgatttgaa gagatacgaa
     1921 gaggcactcg attgttttga tgaggccata ttgtcaaatc cacttgatta tgcttcatgg
     1981 aactttatcg gtgtatgtta ctttaatttg ggaaaattag aaaaggcact agaatgtttt
     2041 gacaagtcaa caaagattag gccagaattt gctgttgctt ggcttaacaa gggaggggtt
     2101 ctgtcaagac ttgataaaaa gaaagaagca gaaaaatgct atgaaaaagc aaagaagcta
     2161 agacaataac atgaatttca ttctgctgta atctgtagtt tacagtaata tatggtgggt
     2221 tttacaacgt gaattggcga aaacttgtgc cggggtcgcc tagcctggta gggcgcgcgc
     2281 ctggaaatga a
//
LOCUS       DASPUS010000190         2081 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1198443, whole genome shotgun sequence.
ACCESSION   DASPUS010000190 DASPUS010000000
VERSION     DASPUS010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2081)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2081
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1198443"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VEJ68_04525"
     CDS             <1..276
                     /locus_tag="VEJ68_04525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06069.1"
                     /translation="QILIGLMKDNPSPKIETMIKKFLLYIQHSTENFWTMYYSAKTYQ
                     EKLDCYYQFSKNQCLATEVLIRDLNSLSSEEELKESLGTILKEGFTF"
     gene            complement(273..869)
                     /locus_tag="VEJ68_04530"
     CDS             complement(273..869)
                     /locus_tag="VEJ68_04530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008297051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HXX06070.1"
                     /translation="MFEKFRKKKDEFKPDSTKKEEDMDDLTTKTIQYQPQELTPEETS
                     EVIEQTKSRPTEQVKIPEPNQQTTMGTSGEDIGIRALMDKRTKLEEAIDYVGLMIKNL
                     KDKRTKLEKSIEDESVDIKNLKEKLIKVGQYIDEEKQGIKTLQQKRGQVEREADDVAS
                     IVGNLREKLLNIDHIVNEEGTKIEKFKETRSKNESTFT"
     gene            1053..1415
                     /locus_tag="VEJ68_04535"
     CDS             1053..1415
                     /locus_tag="VEJ68_04535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6659 family protein"
                     /protein_id="HXX06071.1"
                     /translation="MQLLPIVEDILALDPMMRFAAIIDLKGNISEAIMKEGKTSLKSQ
                     KEEEHFCKQVAIRRKIRKQFDKSLGLVNYVHIERQKVTQIVLYPKHKTVYVTMEPNMD
                     IRRKMEIIQQIKKKTGKL"
     gene            1726..2013
                     /locus_tag="VEJ68_04540"
     CDS             1726..2013
                     /locus_tag="VEJ68_04540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016940139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HXX06072.1"
                     /translation="MSKQQYRSEMGIIADILNVAMEGGCQGVIISAISRRANLSHYAV
                     LEKCQKLIDAGLVESMKEDRNRLYKITEKGIQFFQEFQRFQGVVQVLNLRY"
BASE COUNT          657 a          394 c          368 g          662 t
ORIGIN      
        1 caaattctaa ttgggttgat gaaagataat ccctctccaa agattgaaac aatgattaaa
       61 aaattcttac tatacattca acattcaact gaaaatttct ggaccatgta ctatagcgcc
      121 aaaacttatc aagaaaaatt agattgttac tatcaattct ccaagaacca atgtcttgca
      181 actgaggtac tgatcagaga tctcaactca ttatcatctg aagaggaatt gaaagaaagc
      241 ctgggaacaa tcctaaagga aggctttact ttctaggtaa atgtagactc gtttttagaa
      301 cgcgtttctt tgaatttctc tattttagta ccttcctcat ttactatgtg atctatattc
      361 aataatttct cacgtaaatt gcctactatg cttgcaacat catctgcctc tctttccact
      421 tgacctcttt tttgctgtaa tgtctttatt ccctgttttt cttcgtctat atattgacca
      481 actttgatca atttctcttt gagattctta atatctactg attcatcttc tatacttttt
      541 tctaatttag ttcgcttgtc ttttaaattc tttatcatca agcctacata gtcaatagcc
      601 tcctcaagct tagttcgctt gtccataaga gcccgtattc ctatatcttc accagaagtg
      661 cccatggtag tttgttggtt aggttcaggt atttttactt gttccgtggg tctggacttt
      721 gtttgttcta tgacctcaga ggtttcttct ggtgttaatt cttgtggttg atattggata
      781 gtcttcgttg tgagatcatc catatcctct tcctttttgg tagaatctgg cttaaattcg
      841 tcctttttct tccgaaactt ttcaaacatt gcttatgagt actgtaattt gcaatatata
      901 aaaagttaat agatggaaaa attggtcaaa ttatttacca gattttcaga aatggccctt
      961 tttaatagtg gtcgatcagg catatcatgc gccaagatat atttagagat tgaaacattt
     1021 cacttcgtcc attgaaatcg aacaatcaca aaatgcagct tcttcctata gtagaagata
     1081 ttctggcatt ggatcctatg atgagatttg ccgcaataat tgaccttaag ggaaacatat
     1141 cagaggcaat aatgaaagaa ggtaaaacat ccctaaaatc acaaaaagaa gaagagcact
     1201 tttgcaaaca agtagctata agacgtaaga ttcgcaagca atttgataag agtctaggtc
     1261 tggttaatta tgtgcacata gaacgtcaaa aggttactca gatagttctc tatcccaagc
     1321 ataagacagt atacgtcacc atggagccaa acatggatat aagaagaaag atggaaatta
     1381 ttcaacagat aaaaaagaaa actggaaaat tataaaaaat taagaattgc acaccagaga
     1441 gtcagattta ctctaatgct gctttacggg gtccgtttac atcagtggtg acaaagcgtc
     1501 cacctacata tttcatcttt accgttgtgt tctggcctat ctttactgat aaccgaacct
     1561 gagtcataaa aaattttcaa gggattaaga aaaccatgaa tctcccccgc ttcataaaca
     1621 gttcaaattt atgccatttc agagactgaa acaccagttc cgctagccgt tccgctatgg
     1681 catttcacac tgtccctgat aaaacatgca ttctatagag tgtgcatgtc aaaacaacaa
     1741 tacaggtctg aaatgggaat cattgcagat attctgaacg tagccatgga gggtggctgc
     1801 caaggagtaa ttatttctgc catttccaga agagcgaacc tttcacatta tgctgtgtta
     1861 gagaagtgcc aaaaactaat agatgcagga ctggtagagt cgatgaagga agacagaaac
     1921 aggctttaca aaattacaga aaaaggcatc cagttcttcc aggaattcca gagatttcag
     1981 ggcgtcgttc aggttctcaa tctaaggtac taaaagaatg taccagaaaa cgctggtgat
     2041 cccagaggta tcaatggaaa gaatgctttt tgtaaggtgt a
//
LOCUS       DASPUS010000191         2297 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1327917, whole genome shotgun sequence.
ACCESSION   DASPUS010000191 DASPUS010000000
VERSION     DASPUS010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2297)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2297)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1327917"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..991)
                     /locus_tag="VEJ68_04545"
     CDS             complement(<1..991)
                     /locus_tag="VEJ68_04545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HXX06073.1"
                     /translation="MYKKYAIFLLVLLVIPQISSFDAKAQYSTHPNLFVSAENSVFQN
                     HFAGAMVIEVIVKTDNPQLDQAQGEPNVNIDGKQLRMAQASDGYWYAFFANTQAAQQA
                     SAISLSGGVRGMNLDFGNFCSGSTPSSVLGVDFSQADGVAIPPNSGLSGTTTGLSSFT
                     MCSGNSTSASSQINVLRFPPSLNSDPHVRVGQIGLNPNVWPLIQLFTFSNNVHIEYNG
                     ATGTQSVDLNYFDIPNIGINLDRQFYPQGSDVIATINDIQLDEDPTSADSWTFNVTPN
                     QATFYQAFPESGGASTTGLVNLGTSLSNLGFKDNGKVQMSLGNVVTLKTNSIQT"
     gene            1108..1617
                     /locus_tag="VEJ68_04550"
     CDS             1108..1617
                     /locus_tag="VEJ68_04550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06074.1"
                     /translation="MLKYRNILIISVILVIIGIAILFFQFQDENQGISSQQQSVPQGN
                     SLTVIKNLDPAQSKNGIYSVQMLDFKDGYNVKIDLTDPVGNVITTKSIANDAFEENFT
                     ISHLGNYTLQIQNTGQNETEILAKIGYYPQVSVILDISDFIILIAGLSGLSVGMVLLV
                     KSRGKTESN"
     gene            complement(1610..1921)
                     /locus_tag="VEJ68_04555"
     CDS             complement(1610..1921)
                     /locus_tag="VEJ68_04555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06075.1"
                     /translation="MEEKLDKQKMLETLMNPDVSVIIAELEDGEKEMTYIAQKLQLSD
                     SEIMDRLSYVIEHGFVIVIKDGTKTTFSVDKNKLDDIVTSDENFKGVVNGLTELDQYL
                     N"
     gene            complement(1924..>2297)
                     /locus_tag="VEJ68_04560"
     CDS             complement(1924..>2297)
                     /locus_tag="VEJ68_04560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06076.1"
                     /translation="ILSDKPYSHFYRPDETTIAKIKNERETKLDLRNEMVYLCYRYRQ
                     VDPTIESKTLHEAKKCRREGIEIDTIMVSEEADLLQYVEGLEKHLRGRAYYINPEKID
                     KILISDFISNKKKILSSKHGW"
BASE COUNT          702 a          420 c          408 g          767 t
ORIGIN      
        1 tggtctgaat agaatttgtc ttcagagtaa caacatttcc tagactcatc tgtaccttgc
       61 cattatcctt gaaacccaag tttgaaaggg atgtaccaag atttaccaaa cccgtagtag
      121 aggcgccacc agattctgga aatgcctgat aaaaggttgc ttggtttgga gttacattaa
      181 atgtccaaga atcggcagat gttggatctt catctaattg tatatcatta atggttgcta
      241 taacatcaga gccttgtgga taaaactgtc tgtcaagatt gatgccaatg tttgggatat
      301 caaaataatt tagatcaaca ctttgagtcc ctgttgcacc attgtattct atgtgaacat
      361 tattactgaa tgtgaagagt tgaattagtg gccaaacatt tggatttagc ccgatttggc
      421 caacacgaac atgaggatca gaatttaatg aaggcggaaa tcgtaggacg ttaatttgac
      481 ttgatgcgga tgtagaattt ccactacaca tggtaaatga tgataggcca gtggttgtac
      541 cagataatcc gctgtttgga ggtattgcta ctccatcagc ttgtgaaaaa tccacaccta
      601 gtacagaaga gggtgttgag ccagagcaaa agtttccaaa gtctaggttc attccacgaa
      661 ctcctccaga caatgaaatt gctgatgctt gttgtgcagc ctgtgtattt gcaaaaaacg
      721 cataccaata tccatcagag gcctgagcca ttcgcagttg ttttccatct atgttgacat
      781 ttggttcacc ctgagcttga tcaagttgtg ggttatctgt tttaacgatg acctcgatta
      841 ccattgcacc agcaaaatgg ttttgaaaaa cgctgttctc tgcagataca aaaagattcg
      901 gatgtgttga atattgcgct tttgcatcaa atgacgatat ttgaggaata acaagcaaca
      961 ctagtaagaa aattgcatac tttttgtaca actgctttgt atatcctgac ccagacttaa
     1021 tcttgtcgaa tcaattatac ataatctatg aaccatgaac aaaatcttca gtgaagtttt
     1081 aactaaggga tgtacagctg ccttagtgtg ttaaaatatc gtaatattct catcatcagt
     1141 gttatactag taataatagg aattgctatt ttatttttcc aattccaaga tgagaatcag
     1201 ggtatttcaa gccaacaaca aagtgtacca caaggaaatt ctttaacagt cattaaaaat
     1261 ttagatcctg ctcaaagtaa aaatggtatt tactcggttc aaatgttgga ttttaaagat
     1321 ggatataatg taaaaataga tttgacagat cccgttggaa atgtaataac aactaaatca
     1381 atagccaatg acgcttttga agagaacttt actatttctc atttaggaaa ctatacacta
     1441 cagatacaaa atactggaca gaatgagaca gaaattcttg ccaaaatcgg ttattaccct
     1501 caggtgtcag taattctcga catatctgat ttcattatat taatagctgg attaagtggc
     1561 ctttcagtag gaatggtgct tttggtaaaa agtcgaggta aaaccgagtc taattgagat
     1621 actggtctag ttctgtcaaa ccattaacca cacctttaaa attttcatca cttgtcacaa
     1681 tatcatcgag tttatttttg tcaacactaa atgtggtctt tgtaccatct tttattacaa
     1741 taacaaagcc atgctcaatt acgtacgata gcctatccat aatttcacta tcagatagtt
     1801 gtaatttctg agcaatgtag gtcatctctt tctctccatc ctctaattct gcaatgatca
     1861 cagatacatc aggattcatc aaagtttcca acattttttg cttgtcaagt ttttcttcca
     1921 tatttaccaa ccatgttttg agctaagtat tttctttttg tttgaaataa aatcactaat
     1981 taaaatttta tcaatttttt ccgggtttat gtaatatgct cttcctcgca gatgcttttc
     2041 aaggccttca acatactgga gaagatcagc ctcttcactt accattattg tgtctatttc
     2101 aatgccttct cttctgcatt tttttgcttc atgcaaagtc ttggattcaa tagtcggatc
     2161 tacttgccta tatcgataac acagatagac catttcattt ctaagatcta attttgtttc
     2221 tctctcattt tttatcttgg caatggttgt ctcgtcaggt cggtagaaat gtgagtatgg
     2281 tttatctgac aagatgg
//
LOCUS       DASPUS010000192         2031 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1056763, whole genome shotgun sequence.
ACCESSION   DASPUS010000192 DASPUS010000000
VERSION     DASPUS010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1056763"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1102
                     /locus_tag="VEJ68_04565"
     CDS             <1..1102
                     /locus_tag="VEJ68_04565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HXX06077.1"
                     /translation="GNILSVVISDVHKDGTVTNTGLLNRRAEGFKWTFSFIVNFAAET
                     QRAELKEAILLLDEPARNLHPAQQRGISDLLKGLAGSNQILYATHSPFMIFDYTPGNL
                     LVVELDKRKHLSHIYYDYWNADDQTLIPILYGLSRGLVESIVDRQIGFNSRPVIIVET
                     MSDCMYLNAFDKFLKDPNLSMNPLNIVPAHSKNSVMSLAIFYQNHGYDTFILLDNTEE
                     SKQISTHLQANGFKSVQMIFFESGGQTKQFLEDLILDDDFLYAVNQVYEVKLRKEGYK
                     ALSKDTVSSKGKKSIIDNLNDIWKENQHLGWEKFEREEICRYICEKISIGETDFLTDK
                     TKDQFRSLYRLIAERIRQNQNLVSQTSIPYSR"
     gene            1210..>2031
                     /locus_tag="VEJ68_04570"
     CDS             1210..>2031
                     /locus_tag="VEJ68_04570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06078.1"
                     /translation="MVNVLLKSRILFVLTTGILLASLANPLAHAIPNDVSVTPASTGG
                     VTTLHILNNPSSTSNIVSFTLQIKSGSFLSFKLDNGWQGKKTSSNTIAFISSNPITPG
                     DSTSFAIRTDQQSPDLVWTALDADNNIIGSGEIGTPSSPSSTSSTNNPPSTSTTQPKQ
                     NPGILSMSSFRIVPSTPSPGFDVRVVGQSFASSTNLDLYVGDQKIDSFSSDNNGNFVV
                     TTTLPQTLQLGNTNFILKDQVGNQKTFSTSISQAPPSRGGQQVSIPLTLNMNPVYH"
BASE COUNT          695 a          385 c          348 g          603 t
ORIGIN      
        1 aggaaacatt ttgagtgtag taatatcaga tgttcataaa gatggaactg ttaccaatac
       61 tggactccta aacagaagag cggagggttt caaatggact ttttcattta tagtaaactt
      121 tgcagcagaa actcagcgag cagaactcaa ggaagcaata ttattgcttg acgagcctgc
      181 aagaaactta catcctgctc aacaaagggg aatatctgat ctgctaaaag gacttgcagg
      241 ttccaaccag atactatatg caacccattc tccgtttatg atatttgatt acacaccagg
      301 aaatcttttg gtagtagagc ttgacaagag aaaacacctc agccatattt attatgacta
      361 ctggaatgct gatgatcaga ccttaattcc gattctatat ggattatcaa gaggtcttgt
      421 tgaatcaatt gtggatagac aaattggttt taactcaaga ccagtgataa ttgttgaaac
      481 aatgtctgat tgtatgtatc ttaatgcatt tgacaagttt ttaaaagatc caaatctttc
      541 catgaatcct ttaaacattg ttccagccca cagcaagaat tcagtcatgt ctttggccat
      601 attttatcaa aatcatggct atgatacctt tattctgctt gacaatactg aagagtccaa
      661 acaaatttcc actcatcttc aagcaaatgg tttcaaatct gtacaaatga tattcttcga
      721 gtcaggggga caaaccaagc aatttttaga agatttgata ctagatgatg actttctata
      781 tgctgtgaat caggtgtatg aagtaaaact gagaaaggaa gggtataaag ctctaagcaa
      841 ggatacagta tcttccaaag gcaagaaaag cataatcgat aatctcaatg acatatggaa
      901 agagaaccaa catctgggat gggaaaaatt tgagagagaa gagatttgcc gctatatctg
      961 tgaaaaaatt tcaataggcg agaccgactt tttaactgat aaaacaaagg accagttcag
     1021 atctttgtat agattaatcg ctgagagaat aagacagaat cagaatcttg tttcacaaac
     1081 ttctatacct tattctcgat gaaagtcatg ccagatggat ttgtacttta ctcataaatt
     1141 ctactcttga gaagctgaaa aagaacaatt tatcgttaag atttaattta gagatcaatt
     1201 cttcttggat tggtaaacgt gttattaaaa tcaaggattt tatttgtatt aaccacaggt
     1261 atcttacttg ccagtttagc taatccatta gctcacgcta tccctaatga cgtttctgtt
     1321 acaccagcaa gtacaggagg tgtaaccact ctgcatatcc tcaacaatcc atcaagcaca
     1381 tccaatatag tttcatttac tttacaaatt aaaagtggtt ctttcttatc attcaaatta
     1441 gataatggct ggcaaggtaa gaagacatca tcaaacacaa ttgcgtttat ttcttcaaat
     1501 cctataacac ctggagattc taccagtttt gcaattagaa cagaccaaca atctcctgat
     1561 ctagtatgga cagcacttga tgcagacaat aacataatcg gttcaggcga aataggaaca
     1621 ccatcaagtc caagttcaac ctcatctaca aacaatcctc cttcaacaag tacaacccaa
     1681 cctaaacaaa atcctggaat tttgagcatg tcaagtttta gaattgttcc ctcaactcca
     1741 agtcctggtt ttgatgtgcg tgttgtaggt caaagttttg catcttcaac aaatcttgat
     1801 ttgtatgtag gagatcaaaa aatagactca ttttcatctg acaataacgg aaactttgtt
     1861 gtaacaacga ctctaccaca aacgttacag cttggaaaca ccaactttat cctaaaagat
     1921 caagtaggta atcagaagac gttttctact tctataagcc aagcacctcc atcaagggga
     1981 ggtcagcaag tttcaatacc tcttactcta aatatgaatc cggtttatca c
//
LOCUS       DASPUS010000193         2410 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_2025275, whole genome shotgun sequence.
ACCESSION   DASPUS010000193 DASPUS010000000
VERSION     DASPUS010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2410)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2410
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2025275"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(130..414)
                     /locus_tag="VEJ68_04575"
     CDS             complement(130..414)
                     /locus_tag="VEJ68_04575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06079.1"
                     /translation="MASKEPNPDKVFLRTQLILALIPSFITQIIAFYRIRKLLNGIIM
                     QIIIFFIDLMIQLIISWPFGMIFALPITIGIPVYYVRKWTIEFNKAKSLF"
     gene            complement(539..1228)
                     /locus_tag="VEJ68_04580"
     CDS             complement(539..1228)
                     /locus_tag="VEJ68_04580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06080.1"
                     /translation="MSKEKPVRLTRKKRLVIYAVITIVGVSVAYYNAINSFNFVHSKD
                     WNFDSYQNNTIPEDFVAMETDQSGTWLIKAYDSAPSPPNVLEKLPGNDSSTYHIQIMP
                     DSPTITEATVSMKFKIMPGHKTEAAGLILRFIDKSHFFVLIADPMNNRLSLCKSDTEF
                     VICNYEATTQISVGEWHTMKVNISAQGIGAYLDEVSLIKANNSYYSSGQIGLWTKGDT
                     EAYFDDLKLNY"
     gene            complement(1326..1520)
                     /locus_tag="VEJ68_04585"
     CDS             complement(1326..1520)
                     /locus_tag="VEJ68_04585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06081.1"
                     /translation="MTDKWLIFCITQFISAFLGFLWGFIMHTIIFMYVGGFFFSLGTF
                     AITRWGYDRWKAKQKPRRRK"
     gene            complement(1639..>2410)
                     /locus_tag="VEJ68_04590"
     CDS             complement(1639..>2410)
                     /locus_tag="VEJ68_04590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HXX06082.1"
                     /translation="IGTEDFAGGTVIHITSGFAGLAAAMFLGRRIGYGKAPFEPHSIP
                     LVLLGAILLWYGWFGFNPGSAGFAGFLETEAFQNTNLATAVAAIWWMFLSWAHTGKAS
                     AIGACNGAVAGLVAITPASGFIGVWASIIVGFACATVCFYCVLIKNRARIDDALDTWG
                     VHGMGGVVGALLTGAFSETRINPYGHNGLFFGNPMQFVINCEGAGFGAAWSFGITYII
                     WRIQDAIWPGGVRVTPKEEEIGLDLAQVGERAYTQFAE"
BASE COUNT          738 a          503 c          399 g          770 t
ORIGIN      
        1 aatagtaatt ggtgttggtt atgcgattac atttgctaca agaccgtggc aagtgattta
       61 aaaaatcaca tccctctctt ttcattttat tatttcatat acaataaagt atgaatatta
      121 ccaaagtcct cagaacaaac tcttcgcctt gttaaactct attgtccact ttctaacata
      181 atatactggt attccaattg ttattggcaa ggcaaagatc atgccaaagg gccatgaaat
      241 tatcaattga atcatcaaat caataaaaaa tattatgatt tgcattataa ttccgttcaa
      301 gagttttcta attctataga atgcaattat ttgagtgata aaactcggaa ttagtgcaag
      361 aattagttga gttcgaagaa aaactttatc gggatttggt tcttttgatg ccaatactag
      421 gcttaacatc atcccttact aatgcttgac tcttttatca agtaggaata aaattggatt
      481 tactaccact aaataaaatc tcttcataca atttcatgat ttgcgtggaa aagttttctc
      541 aatagtttaa tttcaagtcg tcaaaatagg cttcagtgtc acccttagtc caaagtccaa
      601 tctgtccact tgaatagtaa gaattattcg ctttgattag tgatacctcg tcaaggtaag
      661 cacctattcc ttgtgcagaa atatttacct tcatagtatg ccactcccca acactaattt
      721 gcgtagttgc ttcataatta catattacaa attcagtatc agatttgcat aatgaaagtc
      781 tattattcat tggatctgct attaagacaa aaaaatgact tttatcaata aatcgcagga
      841 ttaaacctgc ggcttcagtc ttatgaccgg gcattatctt aaatttcatg cttactgtcg
      901 cttcggttat tgttggggaa tctggcatta tctgaatatg atatgttgaa ctatcattcc
      961 caggtagctt ttctagaaca tttggtggtg aaggagcaga gtcataagct ttaatcagcc
     1021 aagttccaga ttgatctgtt tccatagcta caaagtcttc tggtatcgtg ttgttctgat
     1081 aagaatcaaa attccagtct ttcgaatgta cgaaattaaa agaattaatt gcattatagt
     1141 atgctacact tacaccaaca atagttataa cagcataaat tactagtctt ttcttacggg
     1201 taagtcgaac tggtttttct ttggacaata taagaccgag aatactccat ttggtgctcg
     1261 atataaacaa aactaatagt atgaaataga gtatggtgtt ctaccaaaat tggtttatga
     1321 ttttttcatt ttcgtcgtcg tggtttttgt ttggccttcc atctatcata tccccatctt
     1381 gttattgcaa aagtaccaag tgagaaaaaa aatccaccca catacatgaa gattattgta
     1441 tgcattatga atccccacaa aaatcctaag aaagcgctga taaactgagt tatacaaaaa
     1501 ataagccatt tgtctgtcat tgcttgagtc taaccccaca tgctttttac cgtttctgaa
     1561 atcaaattgt catctagtct attatatcaa ttgtttatca aaaataaaca gaaaaatgga
     1621 gggattctag gatgtgtcct actccgcgaa ttgcgtgtat gctcgttctc cgacttgtgc
     1681 caagtctagg cctatttctt cttccttggg tgtaactctt acaccaccag gccatatcgc
     1741 atcttgtatt ctccatatta tgtaggtaat accaaacgac catgcagctc caaagcccgc
     1801 tccttcgcag ttaattacaa actgcattgg atttccaaag aacagaccgt tgtgaccata
     1861 tggattaatg cgtgtttcac tgaatgcacc tgtcaaaagt gcaccaacta caccacccat
     1921 tccgtgcaca ccccatgtat ccaatgcatc gtctattctt gccctgttct taattagaac
     1981 acagtagaaa cagacagttg cacaggcaaa gcctacaatt atcgatgccc agactccaat
     2041 aaatcctgat gctggcgtaa ttgctacaag tcctgctacc gctccgttac atgcaccaat
     2101 cgcacttgct tttccagtgt gagcccaact aaggaacatc caccaaattg ctgcaaccgc
     2161 tgtcgcaagg tttgtgtttt ggaacgcttc tgtttccaag aaacctgcaa atcctgcact
     2221 tccagggttg aaaccgaacc atccatacca gagcaatata gctcctagaa ggactagtgg
     2281 aatcgaatgt ggttcaaatg gagcctttcc ataacctatt cttcttccaa ggaacattgc
     2341 tgcagcaagt cctgcaaatc ctgatgtgat gtgaatgact gtacctcccg caaagtcctc
     2401 agttcctata
//
LOCUS       DASPUS010000194         4239 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_2025472, whole genome shotgun sequence.
ACCESSION   DASPUS010000194 DASPUS010000000
VERSION     DASPUS010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4239)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4239
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2025472"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            48..830
                     /locus_tag="VEJ68_04595"
     CDS             48..830
                     /locus_tag="VEJ68_04595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06083.1"
                     /translation="MVGRGTDNEASRNDAPMKNMTKNGVSPLDLLILHALQGGATPDT
                     ASRELEKMGYVISRDGVKNRLDDLVKKGIILEHNHSEESKKDDRIKWIVVDPSKLFDH
                     QWYTFIKSQNPLFERRVIPYSEMYGNLVEISREYGIVTTIDLLQGEGQNYDFILRIMT
                     NELEVFEELVEKIRSLGWVHSVDSKPIHVLEGVGISKNNLTKVHSHYYYDPIKLPDFE
                     RYIKKIRNVYRTYDTFLKEEGSSKQKVAKKKNGENIDAEGTM"
     gene            830..2005
                     /locus_tag="VEJ68_04600"
     CDS             830..2005
                     /locus_tag="VEJ68_04600"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HXX06084.1"
                     /translation="MTSTVYKNLLIAQCSMCDSPLVFKNGKSNSRQEILSCRKCNSTY
                     TFEDGSLNLLPPKIRSEICTKGIIARIIKDKLHLGMLTKDEHDLVRGILASNNMAKQY
                     FKNVVHPTFAAKSARSYERFEDIFIVQYLGNLLKTKKVTFLDAGSGPGRFMLLLGSKI
                     SPTSCRELKKNPETRELYKHDISYEKNLRYIVGIDYSQEMTRHSSMLLRRYGLGTYLN
                     NRIFPITGVAQNFHLNKEIFDDTYKVVVCTFQTLGNQENRDLQVQLLKSMKKLASPNG
                     TIIVSVFNKRLFKSFGLKKFYGKEVKKTVGNIIASKEDLENSVLRTTKGVYSKWFSKQ
                     DLESLFKEAKLANYTIMDESSLRPITDYKKYLKVDEQTNQVFPRAILGLAKVNSEGT"
     gene            2094..3731
                     /locus_tag="VEJ68_04605"
     CDS             2094..3731
                     /locus_tag="VEJ68_04605"
                     /inference="COORDINATES: protein motif:HMM:NF012271.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HXX06085.1"
                     /translation="MIVGNAYALNTPGSMTPTKLNATAISPTQITLSWLPPMQNYGKT
                     IVGYKIDKMLGGGVFDTLVDNTMSTFPTYSITGLVTGTTYTFRVSAVYSDDTSTDPSN
                     WASTTPLPTSVAPPSTISNSSPKVNEKFDFTPSDGTTLFGVVVTQMDYLQLQERKEPR
                     SILSNDAQTALPLNTDLTGLLIYEKDHQTSPSVPAPLIAAATSSTQIDLSWLPPEESF
                     GQPIIGYKIEWKQAPGLYITVEDNTHDVSTKYSITGLKTGTTYTYRVSAVYATETTSN
                     PSNEASATPLASPQASPQSNIPPPSTPQPTSNNTQPSTSTQPPAQTNVEFDFAPPDGN
                     TLSNVVLTPSDYQQLIVIKDPRSLITNVSQTSNTINNDLAGILKYQSLHTPQSTSQQS
                     ITNYTQPPSSPPKTGLDITILYGVITSVVASGAVGIITWLVRTKVAKKIAKDYNFTIE
                     KFVDSQIGYVRIRNTGQTIEDCTIMSDKQTCVWVDTDVDKPRHVYDGSIFVVRLPQGF
                     EDTNPLISILSGKKIIRKTRYDYMAHGSKIDESADSL"
     gene            complement(3741..3893)
                     /locus_tag="VEJ68_04610"
     CDS             complement(3741..3893)
                     /locus_tag="VEJ68_04610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06086.1"
                     /translation="MNQKAGNGGTKLMTIKNCENCGKALDGFLATHCSDKCIFESIKA
                     SRKFMP"
BASE COUNT         1445 a          860 c          784 g         1150 t
ORIGIN      
        1 caaatgtgtc gcaattgttt ttaagacgag tctgaccctt atgggctatg gtagggcgcg
       61 gaacagataa cgaagcatct agaaacgatg caccaatgaa gaatatgaca aaaaacggag
      121 taagtcctct ggatctacta atactgcatg ccctgcaggg gggagcaacc cctgatactg
      181 cttcgcggga gctagaaaaa atgggttatg tcatatcacg tgatggtgtt aagaacaggc
      241 ttgacgatct tgtgaaaaaa gggataatcc ttgaacataa ccactcggaa gagagcaaaa
      301 aagatgacag aataaaatgg atagtagtag acccaagcaa gctgtttgat caccaatggt
      361 atacttttat caagtctcaa aacccgctct ttgagagaag ggtaattccg tattcggaga
      421 tgtatggcaa tctagttgag ataagcaggg agtatggtat tgtaacaaca atcgaccttc
      481 tccaaggtga gggacaaaat tatgatttca ttcttagaat aatgacaaat gaacttgaag
      541 tattcgaaga gttggttgaa aagattaggt ctcttggctg ggtacattcc gtagacagca
      601 aacccattca cgtacttgag ggagtgggta tatcaaaaaa caacttgaca aaggtacact
      661 ctcactatta ctatgatcca ataaaactgc ctgactttga gcgatacata aagaagatca
      721 gaaatgtata ccggacatat gatacatttc ttaaggaaga aggctcgtca aaacaaaagg
      781 ttgccaagaa aaaaaatggt gaaaacattg atgccgaagg tacaatgtga tgacatctac
      841 agtttacaaa aatttgctga tagcacaatg ttccatgtgc gattcacctc tggtttttaa
      901 aaacggaaaa tcaaacagca ggcaagaaat tctttcatgc agaaaatgca attcaactta
      961 tacttttgag gatggctctc taaatctact gcctccaaag ataaggtctg aaatttgtac
     1021 caaaggtatc attgccagaa taataaagga taaacttcat cttggcatgc ttacaaaaga
     1081 tgagcatgat cttgtcagag gaatcctggc tagtaataat atggcaaaac aatatttcaa
     1141 aaatgttgtt catcctactt ttgcagcaaa atctgcacgt tcctatgaaa gattcgaaga
     1201 catcttcata gtacaatatt tgggaaactt actaaaaacc aaaaaagtaa cttttcttga
     1261 tgccggttct ggccccggca ggttcatgtt gctgcttggg tcaaagataa gcccgacctc
     1321 ctgcagggaa ctaaagaaga atccagagac tcgggagctt tacaagcatg atatatcata
     1381 tgagaagaat ctgcgctata tcgtaggaat agactattcc caagaaatga ctaggcattc
     1441 ttccatgttg ttgcgaagat acggccttgg aacatatctg aataatcgaa tatttccaat
     1501 aacaggcgtt gcacaaaatt ttcatctcaa caaggagata ttcgatgaca cttacaaggt
     1561 agtagtatgc acattccaga cccttggcaa ccaagaaaat agggatttac aggttcagtt
     1621 attaaagtcc atgaagaaac tcgcatcacc taacggcacc ataatagtat ctgtcttcaa
     1681 caaaagactt ttcaaaagtt ttggactgaa aaagttttac ggaaaagagg tcaaaaaaac
     1741 tgtaggaaat attattgcat ccaaagagga tttggaaaac tctgttctta ggacaacaaa
     1801 gggagtttat tccaaatggt tctcaaaaca ggatttggaa tcgctcttca aagaagcaaa
     1861 acttgcaaac tatactataa tggatgaaag ctcacttcgt cctataaccg actataagaa
     1921 atatctcaaa gtagatgaac aaacaaatca agtctttcca agagctattc tgggattggc
     1981 caaagttaat agtgaaggta cataacgagc atatcactag gaaatcaagg atgtataaaa
     2041 aaactagagc gatctttatc ttcagcttat tttctgtagc tgtacttggt atcttgattg
     2101 taggcaacgc ttatgcccta aatacgccag gttctatgac gccaacaaaa ctgaatgcca
     2161 cagcgatatc tccaactcag attacattat cgtggcttcc tccaatgcaa aattatggaa
     2221 aaacaatcgt aggatacaaa attgacaaga tgttgggggg tggagtcttt gatacgctag
     2281 tagataatac aatgagtaca tttcccactt attctattac tggacttgtt accggcacaa
     2341 cttacacctt tagagtctct gcggtatatt ctgatgatac ttctactgat ccatccaact
     2401 gggcttccac tactccactt ccaacatctg tagctcctcc ctccacaatt tccaattcct
     2461 ctccaaaggt aaatgagaaa tttgatttta cgccctctga tggaacaact ctatttggag
     2521 ttgtagtaac acagatggat tatctgcagt tacaagagag aaaagaacca agaagtatac
     2581 tgtcaaacga tgctcagacc gcactgccgc taaatacaga cctgactgga cttttaatat
     2641 atgaaaagga tcatcaaaca tccccatcag tacctgcacc gctaattgca gccgcaacat
     2701 cttctacaca aatagacctc tcatggcttc ctccggaaga atcgttcggt caaccaatta
     2761 taggatacaa gattgaatgg aaacaagctc ctggtctcta cattacagta gaagataaca
     2821 cgcatgatgt ttctacaaaa tattccatca ccggactaaa gaccggaact acgtacacat
     2881 acagggtctc tgcagtttat gccactgaaa caacaagcaa tccatcaaac gaagcttctg
     2941 cgacgccgct ggcctctcca caggcttctc cacaaagcaa cattcctcca ccatctacac
     3001 cgcagccaac atcaaataat acacaaccat ctacctcgac acagcctcct gcacaaacca
     3061 atgtagaatt tgattttgca ccacctgatg gaaatacatt gtctaatgtg gtgcttaccc
     3121 caagtgatta tcagcagttg attgtgatta aggatccaag aagtttaatc actaatgtct
     3181 cccagacctc aaatacaata aacaatgatc tggcgggaat tctaaaatat caaagtcttc
     3241 acacaccaca gtcaacttca caacaaagca taacaaacta cactcaacct ccatcttctc
     3301 cgcccaaaac aggccttgat attacaatac tttatggtgt gataacatct gttgtggcat
     3361 caggtgcagt tggaataatc acgtggcttg tcagaacaaa ggtagcaaag aagatagcaa
     3421 aagattacaa ttttacaata gagaaatttg ttgatagcca aataggctat gtaaggataa
     3481 gaaatacagg acaaacaatt gaggactgta ccataatgtc tgataaacaa acatgtgtct
     3541 gggtggacac tgatgtggac aaaccaagac acgtatatga tggcagcatt tttgttgttc
     3601 gattaccgca aggttttgaa gatacaaatc cgctgatttc catattgagc gggaaaaaaa
     3661 taatcagaaa aacaagatat gattacatgg ctcatggaag caagatcgat gaatcagcag
     3721 actcgctttg attgagtttg ctatggcatg aattttctac tagcctttat actttcaaag
     3781 atgcatttgt cagaacaatg ggttgcaaga aaaccatcta atgctttacc gcagttctcg
     3841 cagtttttaa tcgtcataag tttggttcct ccatttcctg ctttttgatt catagtactc
     3901 ttcccattcc ttactttcag accattcttc aaaccttaat tcgttgtcat ccccactgtc
     3961 atcatcagaa ttcttatttt cttgaatcaa aattattcat tgaggtcata tttttgatat
     4021 aaaaggacag agatgattat caccaatgag aatcacctgc atgctaaaaa attatgaaaa
     4081 agatttgtct tctggaagga aaacactggg catacgtgta tgcaaacatg tattcctaca
     4141 ccccagtagg atttccttcc tattttctat taattaacaa ataacaaaag ccaaatgatt
     4201 ttcatttctg ataatctaga atcttctaat attatactg
//
LOCUS       DASPUS010000195         3933 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_784560, whole genome shotgun sequence.
ACCESSION   DASPUS010000195 DASPUS010000000
VERSION     DASPUS010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3933)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3933
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_784560"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..438)
                     /gene="folE"
                     /locus_tag="VEJ68_04615"
     CDS             complement(<1..438)
                     /gene="folE"
                     /locus_tag="VEJ68_04615"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I"
                     /protein_id="HXX06087.1"
                     /translation="MNKERVKKLIRELIAEIGEDPTREGLVDTPRRIADMYEEIFKGY
                     DAESELSVKFSEDSDIVIAKDIQFYSMCEHHMLPFFGKITIAYSPNGKVFGISKLVRL
                     VEKYSTRLQIQERITKNIADELYGEGVKGVIVIAEGEHLCMKMQ"
     gene            complement(438..1151)
                     /locus_tag="VEJ68_04620"
     CDS             complement(438..1151)
                     /locus_tag="VEJ68_04620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HXX06088.1"
                     /translation="MKVRIYELFTSVEGEGILYGTKTLFVRLAGCPFKCFYCDTKGAL
                     PIDSGYEYTLDKAKELIEKNLKDNTYKVNFTGGDPLLQSEAVGELAKFVQLKKIPTYL
                     ESSCYDSSRFAQVLPNIDYIKIEFKTPDSEFVDAKHYSKLLENELDCLKLATNSGKVT
                     YIKIIINSRTDLGSFKELLKKIFDISTKSQLAGFIIQPSYGIAEPNLEQLFSFYDAVY
                     VYYKDVRIVPQLHKFIGAP"
     gene            1268..3610
                     /locus_tag="VEJ68_04625"
     CDS             1268..3610
                     /locus_tag="VEJ68_04625"
                     /inference="COORDINATES: protein motif:HMM:NF013595.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06089.1"
                     /translation="MLLFFLVITFVSFHEANAITITATPQSPSFGPNQWIIINLNIQG
                     YNGGPITWTAHRPDGSTSTGTINQVIGGKSAVHEIIRDAFDNYFGTWSIDYMYNGVKQ
                     TISFQVNPIILTVLTDKETYYEPDTMQINITSSYYVPVAALAGFYHINFYDNSGNPLT
                     DETQIDIRATQHSMVYSLPMLQISKYYPPGLYEFKVQYFNKVVEVPFVLGEYRKFMDI
                     SAQTEKGSYLVGEDVKFDFLFTRVKESEGILKITDPLGSSSTHPFQVYSVNTILDLNN
                     VTNTVGTYQYVIQYSDISKEGSFKVIPNVSQLPNIETDIFLDKLNYRPGETVHVKVHS
                     SQIITNSITMWVVDPNGKAYQKISFPISTNDIILPHRVSGSDITGQWELYVDNGGIIK
                     SVPFYVKGSPVNYNELLNTNQFSVPVFVSTFGSDFINPTGIAIDSNNDIYVIDSGNSK
                     IKKFDPDGKLLLSWGAVGSGKGQFVNPSGIAIGINYVYITDTGNARIQIFDKNGTFVY
                     AWGGYGDIPGMFHAPTALAFDKNGDLFVTDSGRDTIQIFDSHYMFTDEIRPLLTEGGN
                     FSGTNGIVIDSQSNFYASAIDNKIIKFSESGDFINFVGSDGVEKGRFNNPTAIDHDSY
                     GDFYVADTNNHRIQKFDADGNFILSWGSEGNATGQFEQPIGLAIDSSDNIYVVDKGNN
                     NIQKFVLYGPDRTIAPLWIRDNAMLWSQGGLDKNEFAQAIRYLISQGAIQNLETNQTS
                     QVKIPSWVKADASMWTSGEIDISTFVQALQYLISTGIVKV"
     gene            complement(3607..3804)
                     /locus_tag="VEJ68_04630"
     CDS             complement(3607..3804)
                     /locus_tag="VEJ68_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06090.1"
                     /translation="MASKQITIGIGIPMIVIGALLALFLAPTQPELQDTIEFVGSLIG
                     ILGVVMFIAGLFARKTPQITS"
BASE COUNT         1263 a          682 c          689 g         1299 t
ORIGIN      
        1 ttgcattttc atgcatagat gttctccttc tgcaattaca ataactcctt ttactccttc
       61 tccatacaac tcatcagcta tattctttgt aattctctct tgaatctgca gtcttgtaga
      121 atatttctcg acaagacgaa caagtttaga gattccaaaa actttgccat tgggtgaata
      181 agcaatagtg attttgccaa aaaatggaag catgtggtgc tcacacatgg aataaaactg
      241 gatgtctttt gctatgacta tatcagaatc ctcagagaat tttacagaaa gttctgattc
      301 tgcatcatat cccttgaaaa tttcttcata catgtcggca attctgcgag gtgtgtcaac
      361 aagtccttct ctagttgggt cctctccgat ttctgcaatt agttccctaa ttagtttttt
      421 aactctctct ttgttcatca tggagctcct atgaatttat gtagttgagg aactatacgc
      481 acatctttgt aataaacata gactgcatca taaaagctaa aaagttgttc caaattaggc
      541 tctgcaatac catagcttgg ctgtattata aatcctgcaa gctgtgactt tgtagatata
      601 tcaaaaatct tctttagtag ttctttaaat gaaccaagat ctgtcctaga atttattatt
      661 attttgatat aagtcacttt tcctgagttt gtagcaagtt ttaagcagtc aagctcattt
      721 tccaaaagtt tggaataatg ttttgcatca acaaattcag agtcaggagt cttgaattca
      781 attttgatgt aatcaatatt tggcaagact tgagcaaatc tagatgaatc gtaacatgac
      841 gattcaagat aagttggaat tttttttagt tgtacaaatt ttgccaattc acctactgct
      901 tctgattgta agagtggatc tcctcctgta aaatttactt tgtatgtatt atctttcaag
      961 ttcttttcaa tcaattcttt agccttgtct aaagtatatt cataaccaga atcaatagga
     1021 agtgctcctt ttgtatcaca ataaaaacac ttgaaaggac atcctgctaa tctaacaaaa
     1081 agagttttag ttccataaag tatcccttca ccttccactg atgtgaatag ttcgtaaatt
     1141 cttaccttca agagttcaat ctgtgtctag tcaatattta tttaattgga tttttttatg
     1201 aacaaatttt actaaaacga tttatcctgt tatgggtaac tgacacatag tgaaaagatt
     1261 attttttttg ctcctttttt tccttgtaat aacctttgta tcatttcatg aggcaaatgc
     1321 aataactata accgcaactc cacaatctcc gagttttgga ccaaatcaat ggataataat
     1381 aaatctcaat atccagggat acaacggtgg tccaattaca tggacggctc acaggcctga
     1441 tggttctaca tcaaccggaa caattaacca agttattggt ggtaaatctg cagtccatga
     1501 aataataaga gatgcatttg ataattactt tggcacttgg tcaattgatt acatgtacaa
     1561 tggtgtaaaa caaacaatct cctttcaagt caatccaatt attctaacag ttcttactga
     1621 caaagagacg tattacgaac cagataccat gcagattaac attacaagtt catattatgt
     1681 accggtggct gctcttgcag gattttatca tatcaatttc tacgataata gtgggaatcc
     1741 tttaacagat gaaacccaga ttgatattag ggctacacag catagcatgg tctatagttt
     1801 gcccatgctg caaatttcta aatattatcc acctggatta tatgagttta aagttcagta
     1861 tttcaacaag gttgttgaag tcccatttgt attaggagaa tatcgtaagt ttatggatat
     1921 ttctgcacag acagaaaagg gatcttatct tgtaggagaa gacgttaaat ttgattttct
     1981 cttcactaga gttaaagaat ctgaaggaat tctaaaaata acagatcccc tgggcagttc
     2041 aagtactcac ccattccaag tttattcagt aaacacaatt ttagatttaa acaacgtcac
     2101 caatacagtt ggaacatatc aatatgttat acagtattcc gatatcagca aagagggttc
     2161 tttcaaagtt attcccaatg tatcacagtt gccaaatatt gaaacagata tttttcttga
     2221 caagctaaat tatagacctg gtgaaactgt acatgtcaaa gtccatagct cccaaatcat
     2281 aacaaattca ataacaatgt gggttgtgga tccaaatgga aaagcctacc aaaagatatc
     2341 ttttccaata tcaacaaatg atataatatt accacataga gtaagcggtt cagatattac
     2401 aggacaatgg gagttgtatg tagataatgg cggtatcata aaatctgtcc cattttatgt
     2461 taaaggtagt cctgtaaact acaatgaatt gctaaataca aatcagttta gtgtacctgt
     2521 ctttgtttct acttttggct ctgattttat taatccaact ggaatcgcta tcgattcaaa
     2581 taatgatatc tatgttatag attccggaaa ttctaagata aagaaattcg atccggatgg
     2641 aaaactactt ctctcttggg gagccgtagg atctggaaaa ggacaatttg ttaatccaag
     2701 tggtatagcg attgggatca actatgttta cattacagat acaggaaatg caagaattca
     2761 gatctttgac aaaaacggta catttgttta cgcatggggc ggttatgggg atattcctgg
     2821 catgtttcat gctcccactg cattggcatt tgataaaaat ggagatcttt ttgttacaga
     2881 ttcaggaaga gataccatcc agatttttga ttctcattat atgtttacag atgagataag
     2941 gcctttgctt actgaaggtg gaaacttttc tggaactaat ggtatagtaa ttgactctca
     3001 aagtaatttc tatgcttctg ctattgataa taaaatcata aagttttcag agtcgggaga
     3061 cttcataaac ttcgttggct cagatggtgt tgagaaaggg aggtttaaca atcctactgc
     3121 aatagatcat gattcttatg gtgattttta tgtcgctgat actaacaatc atagaatcca
     3181 gaaatttgat gcggatggaa atttcattct tagttggggt tcagaaggaa atgcaacagg
     3241 acagtttgaa caaccaattg gacttgcaat agattcttcc gataatatct acgtagtaga
     3301 caagggcaac aataacatac aaaaatttgt cttatatggt cccgacagaa ctattgcacc
     3361 attgtggata agagataatg caatgttgtg gtcacaagga ggtctagaca agaacgaatt
     3421 tgcacaagct ataaggtatt tgataagtca aggagccata caaaatttgg agacaaatca
     3481 gacttctcaa gtcaagatcc cctcttgggt caaagctgat gcttcaatgt ggacatctgg
     3541 agagattgat atcagtacat ttgttcaggc gttacagtat cttatctcca caggaattgt
     3601 aaaagtttag gatgttatct gaggcgtttt tcgtgcaaag agtcctgcta taaacataac
     3661 aacacctaga attccaataa ggcttcctac aaactcaata gtatcctgaa gttcaggttg
     3721 agttggtgcc aagaataaag caagcagtgc tccgattacg atcattggta ttccaatacc
     3781 aatagtaatt tgctttgaag ccatctcttt tgctcgctta aaaaactata tgaattttat
     3841 gaaaatcttg tttcagtata agtagtaatt tctattggac tcaagcctgc aacgtgaata
     3901 aactagcgaa tttttcttgt ttttggaatt taa
//
LOCUS       DASPUS010000196         2044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_515362, whole genome shotgun sequence.
ACCESSION   DASPUS010000196 DASPUS010000000
VERSION     DASPUS010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2044)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_515362"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..1428)
                     /locus_tag="VEJ68_04635"
     CDS             complement(160..1428)
                     /locus_tag="VEJ68_04635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015323968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HXX06091.1"
                     /translation="MELTKKIRIYPTEEQESVIWVISDFVRRVYNFALADKQDTWHNE
                     KRPVKYLEQQNKLPEFKKNNPEFKVVYSKVYQSILKKLDSAYRSTITKWKKGDYTAEL
                     PKFKSHKYILTIPYNESGFKIKDGKITFSHYVNDTQLTFDIGSIADGLKIKQVEISND
                     NPYKARGKFYVTITYEEDVKIPFVDNGKIDAIDLGITKIVTSVNTEGEFFEVKTPRPD
                     QYWNPKIDAAKSRRDHCLGGKKGQNKSKKYRHIAKAVSKMSRKKRNQIKDFQHKLSRK
                     MVDKTTANTIIVGDLSVQQMAQPKIKDGKKQKKNKGLNRSTQGLGNLSRFPQLLTYKA
                     DLVGKKVIRVDERNTSRACCCCGKLHDMPEWKRVMSCDCGNVIDRDRNSAINIMVRYL
                     SLYAPDALSTFVDNLRTGFMRNCGSWNQSR"
     gene            complement(1406..1831)
                     /gene="tnpA"
                     /locus_tag="VEJ68_04640"
     CDS             complement(1406..1831)
                     /gene="tnpA"
                     /locus_tag="VEJ68_04640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015323969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HXX06092.1"
                     /translation="MKYNLDKGSHSVYSLHYHFVQCVKYRRKALTNPELIDFLKSKIY
                     SISENFEVEVLDIECDEDHFHMIFTGKPTLQLSKYINAIKTITSREIRKRYPEVKELL
                     WKDSFWSRSYFVATTGQVTLSVLKQYVENQRKHGTNEKD"
BASE COUNT          543 a          399 c          316 g          786 t
ORIGIN      
        1 atttcaaatt ttattaatta tgctttacgc actttaagtg tagaatcaag cacgaggagt
       61 ttccaacttt taaaggttta tccattttag atttttagtt caagtgaact actcctccct
      121 gcctgatggc taggaaggag cttcttgtga gtacttcaat catcggcttt ggttccaaga
      181 accgcaattc ctcatgaagc ctgttcgcaa attatcaaca aacgttgata gcgcgtccgg
      241 cgcataaagt gatagataac gtaccatgat attgatagca ctatttctat ctctatcaat
      301 cacgtttccg caatcacaag acataacacg tttccattca ggcatatcat gtaatttacc
      361 acaacaacaa catgcccttg acgtgtttct ttcatcaact cttattactt tcttacctac
      421 gaggtctgcc ttgtaggtca agagttgtgg aaatctactt aagttgccta agccttgagt
      481 agacctattt agtcccttgt ttttcttctg cttcttacca tccttgattt ttggttgagc
      541 catttgctgt acgctcaaat caccaacaat aatggtattt gcagttgttt tgtctaccat
      601 ttttcttgat agcttgtgtt ggaaatcctt gatttgattt cttttctttc tactcatttt
      661 agaaactgct ttagctatat ggcggtactt tttactctta ttctgtccct tcttaccgcc
      721 taaacagtgg tctcttctgg atttagctgc atcaatcttt ggattccagt attgatctgg
      781 tctcggtgtc ttgacttcaa agaattcgcc ttccgtattg acactagtca ctatttttgt
      841 gattcctaga tcaatagcgt caattttacc gttatcaaca aatggtattt ttacatcttc
      901 ctcataggtg attgtaacat agaactttcc tctggctttg tatggattat cattactaat
      961 ttctacttgt ttgattttaa gaccatcagc aatactacca atatcgaaag ttaattgtgt
     1021 gtcatttaca taatgcgaaa atgttatttt accatctttg attttgaagc cactttcatt
     1081 gtatggaatt gtcagtatgt atttatgact tttgaactta ggtaattcgg ctgtatagtc
     1141 acctttcttc cattttgtaa tagtggatct ataagcacta tctaattttt tcagtatcga
     1201 ttgatacacc ttagaataca ctactttgaa ttctggatta ttctttttga actcagggag
     1261 cttattctgt tgttcaaggt attttactgg acgcttttca ttatgccatg tatcttgttt
     1321 atctgcaaga gcgaaattat agacacgtct aacgaaatct gatattaccc aaataacact
     1381 ttcctgttct tcagttggat agattctaat ctttttcgtt agttccatgt ttcctttgat
     1441 tctccacata ttgttttaat acacttagcg tcacttgtcc tgttgtcgca acaaagtaag
     1501 aacgggacca gaaagaatct ttccatagca attcttttac ttctgggtat ctctttctga
     1561 tttcccttga tgttattgtt tttatcgcat tgatgtattt tgataactgc aaagttggtt
     1621 ttccagtgaa aatcatatgg aaatgatctt catcacattc tatatcaaga acttcaacct
     1681 caaaattttc actgatgcta tagattttac tcttcagaaa atctataagt tcagggtttg
     1741 taagtgcttt tcttctgtat ttcacacatt gcacaaaatg ataatgtaat gaataaacag
     1801 aatgacttcc tttgtcgagg ttatacttca tagttatcac atataatatg atactatgtc
     1861 tatatatacc ttttctatac tatgatggcg gatctcatct cccagttgtc gcttcgctcc
     1921 gaacaaggag acttctcgcc gacgaagtta aaaccaaatc attttaacta ttttatttta
     1981 ctactgtatt atatatatgt acctgttgcc aggatgcatc catttttatg tattaacaaa
     2041 tgat
//
LOCUS       DASPUS010000197         3051 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_940403, whole genome shotgun sequence.
ACCESSION   DASPUS010000197 DASPUS010000000
VERSION     DASPUS010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3051)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3051
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_940403"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..391
                     /locus_tag="VEJ68_04645"
     CDS             <1..391
                     /locus_tag="VEJ68_04645"
                     /inference="COORDINATES: protein motif:HMM:NF016050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cyclophilin-like fold protein"
                     /protein_id="HXX06093.1"
                     /translation="KMSAGSVSKMDLVLSLKGKAQCTLEIKRHLAPKTVGAIIRALPL
                     EGNARLMGNSMAFMDSSLNAGGEKLRSQFKKGEIGFMASNGSICFFLEDVSETKAMTL
                     VGKVTSNVDVLKDVKPGDIFSITQAAT"
     gene            complement(376..687)
                     /locus_tag="VEJ68_04650"
     CDS             complement(376..687)
                     /locus_tag="VEJ68_04650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HXX06094.1"
                     /translation="MGGAKKKSPAQAEKSQQAEAAKKEGPSKKDKKDQKQKTNISVII
                     DEGQAMNFIKSSKVFTVQELSRQTNVKVSAANSYVKNLLNQGTVKRIGGYSGHHIYVA
                     A"
     gene            766..1056
                     /locus_tag="VEJ68_04655"
     CDS             766..1056
                     /locus_tag="VEJ68_04655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06095.1"
                     /translation="MGLDVIEEKNLNDVITYALDYPKMVLSEAKSLSITSNLEDFAYG
                     LYVGYICGVFFDGFLKRNKRYLDIEESSDFHSVIVKRTEEIRLKIKAHLHLK"
     gene            1094..2860
                     /locus_tag="VEJ68_04660"
     CDS             1094..2860
                     /locus_tag="VEJ68_04660"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HXX06096.1"
                     /translation="MKFSLVTNTLGFMENTTKRLELTQHLVDLFKITPPEIIAKVVYL
                     LQGKLRPDHEGVEVGIAEKIAIRSLSKSTGVPVAKIEFEYKESGDFGKATEQILGQKT
                     QTTFLKEDITVERVYDTLYKIAELKGNRSQDMKMKYISSLLNDATPTEGRFISKIITS
                     NLRLGIADYTILDSLAIAFTCSKENRPLLEHAYNVCSDLGKVAEAVAKDGISSLKNFQ
                     VSVFSPVRPMLAERVKTPQEAREKMGPQYVAEYKLDGERVQIHIDNEKIILYSRSLEN
                     ITNYYPDIVEKIGKSIKAQKVILEAEAVAVNENTGEFLPFQELMHRRRKYKIAKAVQD
                     YPITVNFFDVMLLDGTNCLDKAYKERRNILENIVKEDSFAKIMPMTIVKKDEEVEDFL
                     ETAINSGCEGLMLKQLDSPYRAGARASNWLKLKREYRNELGDSLDLVVIGAFYGRGRR
                     TGRYGALLLSAYDEQTDIFPSICKVGTGFTDESLDQFYQILSDKITVKKDPRIDSTME
                     ADVWFEPEVVIEIVASEITLSPIHKVAMDKIRKGSGLALRFPKFTGKIRFEKTAENAT
                     SIDEVITMYNNQKKIVQDEKKI"
BASE COUNT         1047 a          509 c          620 g          875 t
ORIGIN      
        1 aaaaatgagt gctggatcag tctcaaaaat ggatttagtg ttatctctta aaggtaaagc
       61 acaatgcact ctagaaatta agaggcacct tgctcctaag acagttggag ctataatcag
      121 agctctgcct cttgaaggaa atgctcgttt gatgggaaat tccatggctt tcatggatag
      181 ctctcttaat gcaggtggtg aaaagctcag atcacaattc aaaaaaggtg aaattggttt
      241 tatggcatca aatggatcga tttgtttctt tttagaagat gtatcggaga caaaggcaat
      301 gacacttgtt ggtaaagtta catcaaatgt ggatgttcta aaagatgtaa aacccggaga
      361 tatattctct ataactcaag cggccacgta aatgtggtgt ccactatatc caccaatcct
      421 cttgaccgta ccctgattga gtagattttt gacatacgag ttggctgcag atacttttac
      481 gttagtctgt ctggatagct cttgtacggt gaaaaccttg gagcttttta tgaagttcat
      541 tgcctgtccc tcatctatta tgacagaaat gtttgtcttt tgtttctgat ctttcttgtc
      601 tttctttgaa ggaccctctt tcttggcagc ttctgcttgt tgagattttt ctgcctgtgc
      661 aggagatttt ttctttgctc cacccatagc caaatctttt tacatcctat ttataaacga
      721 acaaaatttc agaaattcta aatacaacga aggttgggtt gtgccatggg cttggatgta
      781 atagaggaga aaaatctcaa cgatgtcata acatatgcac ttgattatcc taagatggtt
      841 ttgtctgaag caaaatcttt gtcaataact tccaatcttg aagattttgc atacggattg
      901 tatgtcggat atatttgtgg agttttcttt gatggctttt taaaaagaaa caagcgatac
      961 ctggatatcg aagagtcatc tgattttcac tcagtgattg taaaaagaac tgaggaaata
     1021 agattaaaga taaaggctca tttacatcta aaataactca accttttatc ctacagcctg
     1081 taaaaatcgt cagatgaaat tttccctagt cacgaacacg ctgggattta tggaaaatac
     1141 tacaaaacga ctagagttga cccaacactt ggtagatttg ttcaagatca caccgccaga
     1201 aattattgca aaagtggtgt accttcttca ggggaaatta agacctgatc atgaaggagt
     1261 ggaagtagga atcgctgaaa aaatagccat aagatcttta tcaaaatcaa ccggagttcc
     1321 tgttgcaaaa atagaatttg aatacaaaga atcaggggat tttggcaagg cgacagagca
     1381 gattcttgga caaaaaacac agaccacgtt tttgaaagaa gacataacgg tagaaagagt
     1441 atatgataca ttatacaaga ttgccgagct gaaaggtaat aggtctcaag atatgaaaat
     1501 gaaatatatt tctagtctgt taaacgatgc cacccccaca gaaggaaggt ttatttcaaa
     1561 aataataacc tcaaatctaa gacttggaat agcagattac accatattag attcgcttgc
     1621 aattgcattt acctgttcca aagaaaacag acctttgtta gaacatgcgt ataacgtatg
     1681 tagcgattta ggaaaagttg cagaagccgt tgcaaaagat ggaatatcat cactaaagaa
     1741 tttccaggtt tcggtcttta gtccagttcg tccaatgttg gcagaacgag ttaaaactcc
     1801 acaagaggct cgcgaaaaga tgggaccaca atatgttgca gagtacaagc tcgatggaga
     1861 acgtgttcaa attcatatag ataatgaaaa aatcatcctc tattctagaa gtttagaaaa
     1921 tatcaccaat tattatccag atatagtcga gaagattgga aaatcaatca aggcgcagaa
     1981 ggttatttta gaagctgaag cagtagccgt aaacgaaaac actggagagt ttttgccatt
     2041 tcaagaactc atgcatcgaa ggagaaaata taaaattgca aaagcagtac aagattatcc
     2101 tataactgta aatttttttg atgtcatgtt gctagatggt acaaattgtt tggacaaagc
     2161 atacaaagaa cgtcgcaata ttcttgaaaa tattgtaaaa gaagattcat ttgcaaaaat
     2221 aatgccaatg acaatagtga aaaaagatga ggaagtagaa gactttctcg aaacagcgat
     2281 aaactcaggt tgcgaaggac tgatgttaaa acaacttgat tccccatacc gagcaggggc
     2341 tagagcaagc aactggctaa aactaaaacg cgaatataga aacgagctgg gagatagtct
     2401 tgacttggtc gtaattggtg cattctatgg tcgaggtcgc agaacaggta ggtatggtgc
     2461 attgctttta tcagcatatg atgaacagac agatattttt cccagcatat gtaaagttgg
     2521 tacgggtttt actgatgaaa gtttggatca gttttaccag attctttctg ataaaatcac
     2581 tgtaaaaaaa gatcctagaa ttgatagtac tatggaagca gatgtctggt ttgaaccaga
     2641 agttgttatt gaaattgtgg cctcggaaat tacccttagt ccaatccaca aagtggcaat
     2701 ggacaaaatt aggaagggta gtggacttgc attacgcttt ccaaaattca ctggcaaaat
     2761 aagatttgag aaaacagcag aaaatgccac ttcgattgat gaggtaatta caatgtacaa
     2821 caatcaaaag aaaatagtac aagatgaaaa gaaaatttga gaaataaatt cacagatgat
     2881 aattctttac gcaaagatta atagctgctc ctaaatttta aacctctaga tgtatagcgg
     2941 ggaactagaa gttcaagcaa agagaaaggc acttgccgtt ttgcaggatg aaatcaaccg
     3001 cattcttaac gcagtaagag atctttcttc attgccctcg ttgataatca a
//
LOCUS       DASPUS010000198         3377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_940483, whole genome shotgun sequence.
ACCESSION   DASPUS010000198 DASPUS010000000
VERSION     DASPUS010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3377)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3377
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_940483"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1229)
                     /locus_tag="VEJ68_04665"
     CDS             complement(<1..1229)
                     /locus_tag="VEJ68_04665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06097.1"
                     /translation="MHKLIYLPVFAVLITILSFSIPESHATNYVLTQTMCISSLGGSW
                     NSVTNTCTVSALTLNSGDVLAINSGTTLSVTTSFTNSGNVTLNTGNLAISGTMSNSGN
                     VTNNGGAITNSGTLTNSANAIINNNAAGTIINLGSGTINNSGSISNNPSSTVTNSGTI
                     NNNSTGVINNNLATLTNTGSISNTGTIFNNDGTISSSGTLSNNLGALVSNNSGGTITN
                     TGTMTNSGTIKNNSGIIDNFHSFINNPTGLVNNPATINDECNATFTNNGKLTGNVVQN
                     ICVPPTETPNVSGTLGNNGWYTSDVSITWTVTAPIPITSQTGCGPTTINADTTGQTMT
                     CSATDANSTTSQSVTIKRDATAPSTAVNSATDGTNNPVTNGGKTNSTSISIAFTATDA
                     TSGVAGSTCNIDGGAFSA"
     gene            1452..2279
                     /locus_tag="VEJ68_04670"
     CDS             1452..2279
                     /locus_tag="VEJ68_04670"
                     /inference="COORDINATES: protein motif:HMM:NF018506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015144 - carbohydrate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034219 - carbohydrate transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GRP family sugar transporter"
                     /protein_id="HXX06098.1"
                     /translation="MNSLGLGSAIVSAFSWGTFFVPVKKVKVGNIWQLQGATGIGVIL
                     FAIPIGFLWGFQILPSGLFSGAIWAVGNILALYSVRLIGLSRTSPFLAGFSILVSFLW
                     GILFFGEKFTYLILAVAAVGLLLGGLPLIVNTTKGVPIQKKGYFIAVASGLIGGSYVI
                     PMQATHSLQSGFFSSSLSIFVIGIPLLFFSRRFVKKEMAAGILSGSLFNLGSLTVLIA
                     VGLIGITVAYPISQTATLFAVSWGIFYFKEIVDRRHIIRAVIGAGLIMCGTGLLTIA"
     gene            2318..2986
                     /locus_tag="VEJ68_04675"
     CDS             2318..2986
                     /locus_tag="VEJ68_04675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013483129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase"
                     /protein_id="HXX06099.1"
                     /translation="MKAVIVFSGGIDSVCTAAYLKRRYDLYGITFSYGQKAEKEIQTA
                     RYFSKILKFRDHKVINIDFMKELYQNTNALTYSKMRIPSEFNYSIVVPIRNAVFLSIA
                     SAWAFSKDAKLVAYGAHKDDQRYPDCRPRFSRLLTQALNEGEIDGIRYGLRKRVSIWS
                     PFMGNLSKSNLLNIGYKLLGDKIFKTWSCYSHSKIQCGKCESCLNRKMAFNHAKIIDK
                     TRYA"
     gene            complement(2990..3244)
                     /locus_tag="VEJ68_04680"
     CDS             complement(2990..3244)
                     /locus_tag="VEJ68_04680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06100.1"
                     /translation="MGTHNNVHVPKESWPAFAWYAIEFGIVMGAGLLISSNSMDFFKK
                     MGFDESMTNWIFWGLVGVVYLVYYLIVRPIILRRPALSKI"
BASE COUNT          979 a          556 c          703 g         1139 t
ORIGIN      
        1 gcagaaaatg caccgccgtc tatgttacaa gtagaacctg ctacaccgct tgtagcatcg
       61 gttgctgtaa atgcaatact gatagaagtt gagtttgtct tgcctccatt tgttaccgga
      121 ttgttagtac catctgttgc actattgacg gctgtagatg gcgcagtagc atcccgtttt
      181 atggtaacag attggctagt tgtgctattt gcatcggttg cagaacaagt catagtttgt
      241 cctgtggtat ctgcattaat tgtggtaggg ccacatccgg tctgagaagt tattggaatt
      301 ggagcagtta ctgtccatgt aatggaaacg tcgctcgtgt accagccgtt attaccaagt
      361 gttcctgaga catttggagt ttctgtagga ggtacacaga tattttgtac tacattgccc
      421 gtaagttttc cgttattagt aaaggtagca ttgcattcgt cgtttatggt ggcaggattg
      481 ttgactagtc cagtgggatt attgataaat gaatgaaaat tgtctataat gccagaatta
      541 ttttttattg ttccagagtt tgtcatagtt ccggtgtttg ttatggtacc accagagttg
      601 ttagatacca gtgctccaag attattactt agagttccag atgagctgat tgtaccgtca
      661 ttattgaata tcgtaccagt attgctgata cttccagtgt tggtcagggt tgcaaggttg
      721 ttgtttatga ctcctgtaga gttgttgttg attgtaccac tgttggttac tgtgcttgat
      781 ggattatttg atatgctgcc agagttgtta attgtaccag agcccaaatt aattattgta
      841 cctgctgcat tattgttaat tatcgcattt gcgctgtttg tgagggtgcc agaatttgtt
      901 atggcgccac cattgttagt tacattacca gagtttgaca tggttccaga gattgcaaga
      961 tttcctgtgt ttagtgtaac atttccagag tttgtaaatg atgttgttac agacaaggtg
     1021 gtaccggaat ttattgccaa tacatccccg gagttgagtg tcaaggcgga aactgtacat
     1081 gtgttagtaa cagagttcca tgaaccgcct agtgatgaga tacacattgt ctgtgtaaga
     1141 acatagtttg tagcatgaga ttcgggaatt gagaaactaa gaatggttat taatactgca
     1201 aatactggaa gataaattaa tttgtgcatg cccaacccct attttattag aatagtacca
     1261 ataaataaac tagatctaat gctattcgta gatcagctag tagtgtacta ttattgatgt
     1321 atattctatg catggactgg atgtgaaaca gtgtttgttt cacaacaaat acagaatcgt
     1381 aaattgtagg attttagact aattgaaaaa tagaaaatga gttatacttc acttcttaca
     1441 aaggaactac tttgaattca ctaggattag gatctgcaat tgtttctgca tttagttggg
     1501 gaactttttt tgttccagta aaaaaagtaa aagttggaaa tatctggcag ctacaaggcg
     1561 ctacaggaat tggggtaatt ctatttgcaa ttcctattgg ttttttgtgg ggatttcaga
     1621 ttttaccgag cggtttattc agtggagcta tctgggctgt aggaaacata cttgctctat
     1681 attctgtcag attgattgga ctttcgagaa cctcgccctt tcttgcaggt tttagcattc
     1741 tagtatcttt tttgtgggga attttgttct ttggtgagaa attcacttat ctgattcttg
     1801 cagttgcagc tgttggtttg ttgcttgggg gccttccttt aattgtaaat accacaaaag
     1861 gtgtaccaat acaaaaaaaa ggatatttta ttgcagttgc ttcaggatta atcggcggtt
     1921 cttatgtcat tcccatgcag gcaactcatt cacttcaatc tggtttcttt tcttctagtc
     1981 tttccatttt tgtaattgga atacctttgt tatttttttc aagaaggttt gttaaaaaag
     2041 agatggcggc agggattctt tcaggaagtt tattcaattt aggaagccta actgtcttga
     2101 tagcagttgg tctaatagga atcactgttg cttatcccat ttctcaaaca gcaactcttt
     2161 ttgcagtatc atggggaatt ttttatttta aagaaatagt agatcggcgt cacataatca
     2221 gggcagtaat tggtgcagga ttaataatgt gtggtacagg tctccttaca attgcatagc
     2281 taaacatttt atttggttga tagtgaatgc attcgaattg aaagcagtca ttgtgtttag
     2341 tggtgggata gattcagtat gtaccgcggc atatctaaaa agacgttatg atctttatgg
     2401 aataacattt tcttacggac aaaaagcaga gaaagaaatt cagacagcca gatacttttc
     2461 aaagatctta aaatttcgtg accataaagt aatcaatatt gattttatga aagaattgta
     2521 tcaaaatacc aatgcattaa catactcaaa aatgagaatc ccatcagaat ttaattattc
     2581 catagttgtt cctataagaa acgctgtatt tctttcgata gcttctgcct gggctttttc
     2641 aaaggacgct aaacttgtag catatggggc gcataaagat gatcaaagat atcctgattg
     2701 tagaccaaga ttttctagat tactaacaca agcacttaat gaaggtgaaa tagatggcat
     2761 aagatatgga ctgagaaaga gagtttcgat ttggagtccc tttatgggaa atctttcaaa
     2821 gagtaatctt ctcaatatcg gatacaaact tctaggagac aaaatattca aaacatggag
     2881 ttgttattct cactcaaaga tccagtgtgg aaaatgtgaa tcgtgtctta atagaaaaat
     2941 ggcatttaat catgctaaga taatagataa gacaagatat gcttagggcc taaatttttg
     3001 acaaggctgg tcttctcaaa atgattggtc ttactatgag gtagtagacc aaatacacta
     3061 caccgaccaa accccaaaag atccaattag tcatggactc gtcaaaaccc atctttttaa
     3121 aaaagtccat agagtttgac gaaatcaaca atcctgctcc cattacaata ccaaattcta
     3181 tggcgtacca tgcaaatgct ggccaagact cttttggaac atggacattg ttgtgtgtac
     3241 ccacaaatct caagagttcc gagtcgttat ttaatttttc agattatatt atgtttggcg
     3301 gagatctacc gttatatatt agactcagaa cgtcagctcg tgcctccttt ttatcataaa
     3361 ttcctcttga tgcaata
//
LOCUS       DASPUS010000199         3634 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_104840, whole genome shotgun sequence.
ACCESSION   DASPUS010000199 DASPUS010000000
VERSION     DASPUS010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3634)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3634
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104840"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1603
                     /locus_tag="VEJ68_04685"
     CDS             <1..1603
                     /locus_tag="VEJ68_04685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015021042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase II large subunit"
                     /protein_id="HXX06101.1"
                     /translation="PPVHVLFPIGIKGGTTRDILKAAKDESFYAEIANRFCNNCKLPS
                     IGTHCRNCYAHTPICNLCVVCREEITDGVNNNRCHRCGKDGKTYSPVNFSLKTAVEEA
                     QRKLGIVASEPFKGVKALMSKHKAAELLEKGILRQKFGLYSFKDGTVRFDATNEPLTH
                     FKLKWNTSSIQKLIELGYKRDYRGQELVSTDQLVELLMQDIVLPLDCAKHLLNVANFI
                     DEELVKLYGLEPFYNSSSVEDLIGHLIVGLAPHTSVGIIGRIIGFTNSQVCLAHPLWH
                     SAKRRDCDGDADSVMLLADAFLNFSYDFLPDKIGGLMDAPLLIQPIVLPNEVQRQAHN
                     IDVTSVYPLEFYDATLKQAKAGDFVNKIEVIKNRVGSEDQFVGYGFTHSTGLLTTNIQ
                     RSAYSRLNTMDEKLKMQIATAKLINAVDPDDVVSMVLTTHILPDIMGNMRSYSSQSFR
                     CSNCGEKYRRMPLIGKCMECEHELLQTVTRGSVEKYANIAINMCTQFKVNEYLRGRVE
                     SLMTELKLIFRERKKEQFTLNEFMD"
     gene            2435..>3634
                     /locus_tag="VEJ68_04690"
     CDS             2435..>3634
                     /locus_tag="VEJ68_04690"
                     /inference="COORDINATES: protein motif:HMM:NF014803.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06102.1"
                     /translation="MENFQIQLVENPNLTTPALNHFVKPNDISKLVAQYGTPLYLIDE
                     NTLHAKVKELHTAYAKFVGPLKIAYSIKANFNPAILRAFITDGITFDLTSIGELHFIK
                     RCKAVPENIIYTSVTEEFEEYLEVLQSGVRKVVVSSFNGMTNLAKAASRVGVKLPTII
                     RVNPEVGVKAGVRASYRNGKFGVPFNGGTIDSATKMVKHLMDNDLLRFEGFHFHLGSQ
                     ITDFSCFTHALDKMDTFMTKMKKEYPNFQVNTFDIGGGTPVFYDDPVPSPAQMAENLV
                     SRLNELANSHGVFQLLIESGRFLVAESSILVSKIVNMKEYNEHKIVIVDSGYHLLLDA
                     ALLKQGYPQEIVSLPKHEAKTASLIPTKNLHLAGRLCDTYDIFPLSKSSSLNEADVGR
                     YISFHNVG"
BASE COUNT         1188 a          654 c          712 g         1080 t
ORIGIN      
        1 accccctgtt cacgtattgt ttcctattgg tatcaaagga ggaacaacac gcgatatttt
       61 gaaagcagca aaggatgaat ctttttatgc tgaaattgca aacagatttt gtaataattg
      121 taaactgcct tcaattggaa cacactgtcg aaactgttat gctcatactc ccatatgcaa
      181 tctatgcgta gtttgcaggg aggaaattac agatggcgtt aataacaacc ggtgccatag
      241 atgcggtaaa gacggcaaga cttactctcc cgtcaacttc tcactaaaaa cagctgttga
      301 agaggcgcaa agaaaacttg gaattgtagc aagtgaacca ttcaaaggtg ttaaagctct
      361 catgagtaag cacaaagctg ctgagctgtt agagaaagga atactgagac aaaaatttgg
      421 tctttatagt ttcaaggacg gaactgttag gtttgatgcc accaatgagc ctctgactca
      481 ctttaaactc aagtggaata caagtagtat acaaaaatta attgaattgg gctataaaag
      541 agattatcgt ggtcaagaac tagtgtcgac tgatcaattg gtcgaactac tgatgcaaga
      601 catagtacta cctttggatt gtgcaaaaca tttgctcaat gtagccaact ttattgatga
      661 agagcttgta aaattatacg gacttgagcc cttctataac tcatcctctg tagaagacct
      721 tatcgggcac ttgatcgttg gattggcccc acatacatct gttggcatta taggaagaat
      781 tataggtttt accaattccc aggtctgttt ggcccatcct ctgtggcact ctgcaaaacg
      841 cagggattgc gacggtgatg cagactctgt aatgttatta gctgatgcgt tcctaaactt
      901 ttcatatgat tttttgccag ataaaattgg cggactaatg gatgccccat tacttattca
      961 gcctattgtg ttaccaaatg aggtacaaag acaggctcat aatatcgatg ttacttcagt
     1021 ttatccgctt gaattttacg atgcaacttt aaaacaagcc aaggcaggag actttgttaa
     1081 caagatagaa gttatcaaga acagggtcgg gagtgaagac caatttgttg gctatggatt
     1141 tacacattca acaggtctgc taacgaccaa cattcaacgc agtgcatatt ctaggctgaa
     1201 tactatggat gagaaattga aaatgcagat cgctactgca aaactaatca atgctgtcga
     1261 tcctgatgat gtagtatcaa tggtgctgac gacacacata ttgccagaca ttatgggcaa
     1321 catgcgatcc tactcatcac agtcctttcg gtgtagtaac tgcggagaaa aatatcgcag
     1381 aatgccactt atcggcaagt gtatggagtg tgaacatgag cttttgcaaa cagtcactag
     1441 aggctcggtt gaaaaatatg ccaatattgc aataaatatg tgtactcagt tcaaggttaa
     1501 tgaatacttg cgtggcagag ttgagtctct aatgacagaa ttaaaactga tctttagaga
     1561 acgaaagaaa gaacagttta ctctgaatga atttatggat taactgctat tctatcttta
     1621 tcaatacttc tctgggtgag aatagtggtc ttaaatctaa tccactgaaa cattttttca
     1681 tactgagttt acagacactt tatagcatta tgagcaaaga acccagaaaa gtaaatttag
     1741 ataattgttg catacaaata gactactgtg taagtgaatg ccaaacaagt tgcactatag
     1801 cgaaagtttt acatctatga tctgattggg acctggctca cagctatcta tttcaaatca
     1861 tcaaatcgtc tgaaccccga atcgtatgat cgtatgtttc gttataccaa tctgttatca
     1921 ttatcttctt tcggctctct cctctaagcc aatatatctc ttcgactatt ttattctaaa
     1981 tgaccctctc gcagattcaa gttgattaaa aaactagatt caatattgca ataatcaatc
     2041 ttataaaata tacttacatt cgctttttcc agatttctct ttgagattta cctattgtgg
     2101 agagagtgtc tttaattgtc aaatggataa gaagattata cgaagaagat attttcctct
     2161 tctcttccca aaaaagctca ggtaaaaatg ttgcgtattg aacgttcatt ttaaaattct
     2221 gacaggtatt acaatccaaa aaaagtatgt attgaaaata aaaagatcat caatgcaaaa
     2281 aaagtatgta ttaactacat gtcagcttgc tagacattga aaacgtgaat gtgtgtatag
     2341 gatcatgaac actaattttt gtaattacaa atagtaattt agttggggca atgtttttaa
     2401 gttataagct taacaaaata acaaaaagaa attggtggaa aattttcaga ttcaactggt
     2461 ggaaaatccc aatttaacga caccagcgtt aaaccatttt gtaaaaccaa atgacatcag
     2521 caaattagtt gcacagtacg gcacccctct ttatttaatt gacgaaaata cactgcatgc
     2581 aaaagtcaag gaattacata cagcgtatgc gaagttcgtt ggccctttga agatcgccta
     2641 ctctattaaa gctaacttta acccagcaat cttacgtgca ttcataactg atggcataac
     2701 tttcgatttg acatctattg gcgaacttca ttttataaaa cgatgcaaag cagttcccga
     2761 aaacatcatt tatacaagcg ttactgagga atttgaagaa tatctcgagg tattacaaag
     2821 tggtgtaagg aaagttgttg tgagttcctt taacgggatg acgaatctgg caaaagctgc
     2881 tagcagagtg ggtgtgaagt taccaaccat aatccgagtg aatccagaag taggagttaa
     2941 agctggagtt cgtgcttcgt atagaaacgg taaatttgga gttccattca atggtggaac
     3001 tattgatagc gcgaccaaga tggtcaaaca cctaatggat aatgatttac ttagatttga
     3061 gggatttcac tttcatctag gatctcaaat tacagacttc tcatgtttta cgcatgcgct
     3121 tgacaagatg gataccttta tgacaaaaat gaagaaggag tatccgaact tccaagtcaa
     3181 tacattcgat attggtggtg ggactccagt tttctatgat gatccagtac caagtcctgc
     3241 acaaatggct gaaaaccttg tctccagact caacgaactc gcgaacagtc atggagtatt
     3301 tcaattattg atagaaagcg ggagatttct tgtagctgaa tcgtcgatct tggtttctaa
     3361 gatagtaaat atgaaggaat ataatgaaca caaaattgtg atagtagatt caggttatca
     3421 tttattgttg gatgctgctc tcttaaagca aggatatcca caagaaatag tttcactgcc
     3481 taaacacgaa gcgaagacag caagtctaat acccacaaag aatctccatt tggctggtag
     3541 gctgtgtgat acgtatgaca tttttccctt gtcaaaatct tcgagcctga acgaggcaga
     3601 tgttggaagg tatatttcat tccataatgt agga
//
LOCUS       DASPUS010000200         2407 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1751611, whole genome shotgun sequence.
ACCESSION   DASPUS010000200 DASPUS010000000
VERSION     DASPUS010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2407)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1751611"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..961
                     /locus_tag="VEJ68_04695"
     CDS             <1..961
                     /locus_tag="VEJ68_04695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HXX06103.1"
                     /translation="LLKDKVYSVQSATTKRGIYPLHSYKLGLYRLPIKLEDQYEIDSI
                     VSGFKKTFVMDQFADRIYATYRWKEENMPDPDESGYKSVELEVQVEIVTGEVVDMIYQ
                     IYPVEKYGDGIWVKDYRKKADANAKMIIDTILRNSVLADKMVEHLTKGHEQVTDELKA
                     QALKQLEEMTPLAQIVPNAKPKPKPAAPPPGQQAAQQVEAETPSGAKAGPIDVGFKTK
                     LKVTETFTAPASGHKIKVFGQRKGNEILGIWGEFVSVDYDICVGDGACIDACPVKVYE
                     WAEFQGNPASDKKPLMAREPDCIFCLACENVCPVQAIKISKKG"
     gene            1011..>2407
                     /locus_tag="VEJ68_04700"
     CDS             1011..>2407
                     /locus_tag="VEJ68_04700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose synthase family protein"
                     /protein_id="HXX06104.1"
                     /translation="MLLHAVPTPLTQFLWNIFIAIALVITLYTCNFYYLVFLSRQQKK
                     TRSVELKDTPTVTIQLPIYNEKYVAERLVNAVCALDYPKDKLCIQVLDDSDDDTSAIL
                     ENLVNDYKKNGFDISHVRRGDRKGYKAGALRYAMKSVKSDFVAIFDADFIPPAWFLKK
                     ALSHFCKDDIGLVQCRWGHVNEKYSALTMAQALSLDFHFLVEQKAKSNSHLFMNFNGT
                     AGVWRRECIEDAGGWHTATLVEDLDLSYRAQMKGWKCVFIPDIVVDAELPVQMNAAKR
                     QQFRWAKGSIQCAIKLLGDVVIKKIPFDTKIQAFVQLTRHIVYPLMLIQFLILPILLA
                     SKINLYIVSGLPLLTIISYLAMGPVVYIMIIRDIYAKSWKSKVLSYLYMVFYSAGMSV
                     NNTVAVFDAFFGKKNEFLRTPKFGIVNKTDDWRDKAYALPFTKTTLLEIFFGVYGIIG
                     MFIAIFSNNAVFTPI"
BASE COUNT          795 a          427 c          511 g          674 t
ORIGIN      
        1 cttactgaag gacaaagttt attccgttca atctgcgact acaaaaagag gcatttatcc
       61 actacatagt tacaaacttg gattatatcg attgccaatc aagcttgaag atcaatacga
      121 aatcgattca atcgtaagtg gttttaagaa aacatttgtc atggatcaat ttgctgatag
      181 gatatacgca acatatcgat ggaaagagga gaatatgcca gatcctgacg agtcaggata
      241 caaatccgta gaactagaag tacaagttga gatagtaact ggtgaggttg ttgacatgat
      301 atatcaaatt tatccggttg aaaaatacgg tgacggaata tgggtaaaag attacagaaa
      361 gaaagcagat gctaatgcca agatgataat tgataccatc ttgcgtaata gtgtacttgc
      421 tgataagatg gtggagcatc ttactaaagg acacgagcag gtcacggatg aactaaaggc
      481 acaagctcta aaacaattgg aggaaatgac tccacttgca caaattgttc caaatgccaa
      541 accaaaacca aaaccagcag cacctccgcc tggtcaacaa gctgcccaac aagtagaagc
      601 agagactcca tcaggtgcaa aggcaggacc aatagatgta ggatttaaga caaaactcaa
      661 ggttactgaa acatttacag ctccagccag tggtcacaag atcaaagtat ttggtcagag
      721 aaaaggaaac gagatcttgg gtatttgggg cgagttcgta tcagttgatt atgacatttg
      781 tgtgggagat ggagcatgta ttgatgcatg ccctgtaaag gtctacgagt gggctgaatt
      841 ccaaggaaac ccagcatctg acaagaaacc gttgatggca agagagccag attgtatatt
      901 ttgcctggct tgtgagaacg tctgccctgt acaggcaatc aaaatatcaa agaagggtta
      961 gctgtaaagt agcgctacgg ctataaagac tcatgcgttg agaaaataca atgctgttac
     1021 atgcagtccc aacccctctg acgcaatttt tgtggaatat tttcatcgca attgccttgg
     1081 tgataacact ttacacttgc aatttctact atcttgtctt tctttcaaga cagcagaaaa
     1141 agacaagatc tgtagagcta aaggatactc caactgtaac aattcaactt ccaatttaca
     1201 atgaaaaata tgtagcagaa agactcgtaa atgcagtttg tgcattagat tatccaaagg
     1261 acaagttatg tatccaagta cttgatgatt cagatgatga tacatctgcc atacttgaga
     1321 atctggtcaa tgactacaaa aagaatggtt ttgatatatc gcacgtaaga agaggagata
     1381 ggaaaggcta caaggcaggt gcgctgcgct acgcgatgaa atccgtaaaa agtgattttg
     1441 ttgcaatatt tgacgcagat tttattcctc ctgcttggtt tttgaaaaaa gcattatcac
     1501 acttttgcaa ggatgatata ggtttggttc aatgcagatg ggggcatgtc aacgaaaaat
     1561 attccgcctt gacaatggca caagctctaa gtcttgattt tcactttcta gtagaacaaa
     1621 aagcaaaaag taattcacat ttgtttatga atttcaacgg tactgcaggc gtatggagaa
     1681 gagaatgcat agaagacgct ggaggatggc acactgctac acttgtcgaa gacttggatc
     1741 ttagctacag ggcacagatg aagggttgga agtgtgtgtt tataccagat attgttgtag
     1801 atgcagaact acccgtacag atgaatgctg caaaacggca acagttcaga tgggcaaaag
     1861 gatctatcca atgtgccatc aaactactgg gagatgttgt gattaagaag ataccatttg
     1921 ataccaaaat tcaggccttt gttcagctaa ctcgacatat tgtttaccca ttgatgttga
     1981 tacagtttct aatacttcca atattgttgg cctcaaaaat aaacctctac atagtaagtg
     2041 gtttgccact tcttactata atctcgtatc tagctatggg tcctgtggtc tatatcatga
     2101 taattcgtga catttacgct aaaagttgga aatctaaagt actatcatat ctttacatgg
     2161 tattctattc tgctggcatg tcagtaaaca atactgtggc agtctttgat gcattctttg
     2221 gtaaaaaaaa tgaatttctt cgtactccaa aatttggaat tgtaaacaag actgatgatt
     2281 ggagagacaa ggcatatgct ttgccattta caaaaactac actgcttgag atcttctttg
     2341 gagtgtatgg aattattggt atgtttattg caatattttc taacaatgca gtctttaccc
     2401 caattat
//
LOCUS       DASPUS010000201         2099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1606390, whole genome shotgun sequence.
ACCESSION   DASPUS010000201 DASPUS010000000
VERSION     DASPUS010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1606390"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            288..704
                     /locus_tag="VEJ68_04705"
     CDS             288..704
                     /locus_tag="VEJ68_04705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HXX06105.1"
                     /translation="MLLPAEIETKTLIPALRAILAKKLIEEHKIREEEVSKMLGVTQA
                     AISNYVRGTRGDPELINKLLAVKEVSDMINDICGNLASNMAYTPSSLSKFIGLCNYIK
                     SSLLICDIHHKLESNIDEAICKECENMLLKGPGSAF"
     gene            complement(701..1009)
                     /locus_tag="VEJ68_04710"
     CDS             complement(701..1009)
                     /locus_tag="VEJ68_04710"
                     /inference="COORDINATES: protein motif:HMM:NF014029.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HXX06106.1"
                     /translation="MSGIEEHVHLNNTRSADGKLIMINQQPVMEYALDILTEIVRHKT
                     ITLMARGDSIPTAVAIANVLTENMLKGNSTIQNIEVDSDSPDGNALVSIIKITITKTN
                     "
     gene            complement(1069..1569)
                     /locus_tag="VEJ68_04715"
     CDS             complement(1069..1569)
                     /locus_tag="VEJ68_04715"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit K"
                     /protein_id="HXX06107.1"
                     /translation="MSDEPEEVSADTEEVTPEEEEPTVLAPVVETAEVTAEEEEAKPV
                     KRGKKELSEEEIAEQERIQKIIAAREVIEVDPIHTPVEFETTSKGKIMIGPPTLTRFE
                     KARILGARALQLSLGAPPFISVPKEVATSLDLAYSELEKRVIPITIRRVLPNGDFQNI
                     PIDLFD"
     gene            1622..2008
                     /locus_tag="VEJ68_04720"
     CDS             1622..2008
                     /locus_tag="VEJ68_04720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclophilin-like fold protein"
                     /protein_id="HXX06108.1"
                     /translation="MSAGSVSKMDLVLSLKGKAQCTLEIKRHLAPKTVGAIIRALPLE
                     GNARLMGNSMAFMDSSLNAGGEKLRSQFKKGEIGFMASNGSICFFLEDVSETKAMTLV
                     GKITSNVDVLKDVKPGDIFSITQAAT"
BASE COUNT          636 a          392 c          370 g          701 t
ORIGIN      
        1 tttaattttt ttatcaccaa tgcaacaagc taagatcgac gaatctaggc ctccagataa
       61 agagatacaa tcaactttgc atctttgagc agattccgaa atcaatgatt gcagttttga
      121 agcaacttct tgcaattgaa tcatttgtat attcccatca aataagtcat tgtcaacaag
      181 attttaaatc tagtaatttg aattagctcc agcttatgat aaataacaaa aatatctgta
      241 gagagatttt taattaggtt taaatatttt aagacggcaa ttttcttatg cttctacctg
      301 cagaaataga gacaaaaaca ctcattccag cattgagagc aattttagca aaaaaattaa
      361 tcgaagaaca caagatcaga gaagaagagg tttcaaaaat gcttggagta acacaggcag
      421 ctatatccaa ttatgtcaga ggtacacgtg gtgatcctga acttatcaac aagcttctag
      481 cagttaaaga ggtgtcagac atgataaatg atatttgtgg taatttagca tccaacatgg
      541 catacactcc ttccagtctt tccaagttta ttggtctatg caactacata aaatccagtt
      601 tattgatttg tgacattcat cacaagttag agtcaaacat agacgaagca atctgtaaag
      661 aatgtgaaaa tatgctattg aaagggccag gaagcgcttt ctagttagtt tttgttatag
      721 taatcttaat tattgaaacc aaggcatttc catcaggact gtcgctgtct acttcaatat
      781 tttgtattgt agaattaccc tttagcatgt tctcggttag tacatttgcg atcgcaactg
      841 cagttggtat tgaatctcct cttgccataa gagtaattgt cttatgtcgt actatttctg
      901 tcaaaatatc aagagcatat tccattactg gttgttgatt tatcattatc agttttccat
      961 ctgctgatcg agtattattc agatgaacat gctcttctat tccactcaac aatccctatc
     1021 tcactccaaa ttatacattc tattaaagtc ttatcgacga atcatccatt agtcgaaaag
     1081 atcgatcgga atattttgaa agtcgccatt tggtaaaact cttcttattg taattggaat
     1141 cacacgtttt tcaagttcgc tataagctaa atcaagagaa gttgcaacct cttttggtac
     1201 agatatgaat ggtggtgcac ctagggaaag ttgtaatgct ctagctccaa gtattctagc
     1261 cttttcaaag cgggtaagtg ttggtggccc aatcattatc tttcctttac ttgtagtttc
     1321 aaattcaact ggggtatgaa ttggatctac ttcaattact tctcttgccg caataatttt
     1381 ttgaattctt tcttgttcag caatttcttc ttctgaaagt tctttcttac ctctctttac
     1441 tggttttgct tcctcttctt cagctgttac ttcagctgtt tcaacaaccg gtgctaaaac
     1501 cgttggttct tcttcttctg gtgtaacctc ttcggtatct gcactaactt cttcaggttc
     1561 atcagacatt gaggttttgg acaaagaaac gttatatatt tcataatctt cctgttcaaa
     1621 aatgagtgct ggatcagtct caaaaatgga tttagtgtta tctcttaaag gtaaagcaca
     1681 atgcactcta gaaattaaga ggcaccttgc tcctaagaca gtcggagcta taatcagagc
     1741 tctgcctctt gaaggaaatg cccgtttgat gggaaattcc atggctttca tggatagctc
     1801 tcttaacgca ggtggcgaaa aactcagatc acaattcaaa aaaggggaaa ttggttttat
     1861 ggcatcaaat ggatcgattt gtttcttttt agaagatgta tcggagacaa aggcgatgac
     1921 acttgttggc aaaattacat caaatgtaga tgttctaaaa gacgtaaaac ctggagatat
     1981 attctctata actcaagcgg ccacgtaaat gtggtgtcca ctatatccac caatcctctt
     2041 gaccgtaccc tgattgagta gatttttgac atacgagttg gctgcagata cttttacgt
//
LOCUS       DASPUS010000202         2420 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_2028499, whole genome shotgun sequence.
ACCESSION   DASPUS010000202 DASPUS010000000
VERSION     DASPUS010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2420)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2028499"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /locus_tag="VEJ68_04725"
     CDS             <1..430
                     /locus_tag="VEJ68_04725"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HXX06109.1"
                     /translation="KIVSNKLDLHYNIDERLTEIDMGIFSGMPYEEMFAKHGNVFLKF
                     YEGNPIIEENGIETFASVKKRVLDMIDHCLRKHNNENILLVTHMDPIKSMVSTILQSR
                     PESLYELIIRNASLTILKKEQSNLSLVSINSMCPERYPQE"
     gene            538..1545
                     /locus_tag="VEJ68_04730"
     CDS             538..1545
                     /locus_tag="VEJ68_04730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007403039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HXX06110.1"
                     /translation="MIRLKLLFGLVLIFVLITVSLGHVYAVTPVFTLNTDSQLYTRGQ
                     PLLVYGKALPNEPIIIRLFAPDGTIAQFNQIAADNNGNYNQILIRWPNATANYAYGTY
                     SVEGIATKEDSYSIRADIKFVPSTSVVPVPIQRNLIATVYAPQTAAVNETIRIFVQVT
                     SDGQLVTGSPSIVLAYSHVHPPSGDVIDLTNTFQTLHQGLYYTDFTPTQEGTYVFHMV
                     ANDQGYVSQSSAVTLVIKQSIEGISNQIIRLNTVLETTSSELGNLKTQIQGFGEALNT
                     SQNSITQANQNMNKSVSSMSDSVKNLEAASGQFNSLFLPVVALIAVIIALQITILARR
                     R"
     gene            1551..>2420
                     /locus_tag="VEJ68_04735"
     CDS             1551..>2420
                     /locus_tag="VEJ68_04735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase S8"
                     /protein_id="HXX06111.1"
                     /translation="MVKKLLAMSNTGIFLICLLLFSMFPKSVDAFYDPDIPRPNSVVM
                     QYNSGLIHFQPVSDQNPLQRYIVFGSGPLSDITSEAKNVIYGESSSHGSFAIGIFQQN
                     EVASLKLKGYNVIEDMPLEFDSIPSKISHIHDAARVDEILGTDKVITKYHYTGAGIKI
                     GIVDQGTDFSNPDMQDSVARGGRNIPIMIDADGQGLVLTNQTFIANINNYGVISNYTN
                     HIPKGITSYVYVTSQGVFINLSNNGQGTTIQAFNSNYPKGGTPVINGTVSNDYKIGKD
                     SRHYIVSKSGIYHF"
BASE COUNT          841 a          441 c          398 g          740 t
ORIGIN      
        1 aaaaatagtc tcaaacaaac ttgatctaca ttataatatt gatgaaaggc taacagaaat
       61 tgatatgggt attttttctg gtatgccata tgaagaaatg tttgcaaaac acggaaatgt
      121 ctttctaaaa ttttatgaag gaaatccgat aattgaagaa aatggtatag aaacatttgc
      181 tagcgtcaaa aaacgggttc ttgatatgat tgatcactgt ttaagaaaac ataacaatga
      241 aaatatctta cttgtaacac acatggatcc cataaaatca atggtatcta ctatcttaca
      301 atcaagacca gaatcattat atgaattaat aataagaaac gcatcactta caatattgaa
      361 aaaagaacag tctaatttgt ctctagtttc aataaactca atgtgccctg aaagatatcc
      421 gcaagaatga attgaaaaaa gagtaatttt tgtttgtgct gaattttcat tctaacatct
      481 tttaccaaca gacatgtttg tttgtagcag aaccaatatc tatgggtgac agtcatcatg
      541 attagattga aattactgtt tgggcttgta ctcatatttg ttttgataac tgtctctctt
      601 ggacatgttt atgctgtcac accggttttc acattaaata cagattcaca actatacact
      661 agaggccaac ctcttcttgt ttacggaaaa gctcttccaa atgagcctat aataataaga
      721 ttatttgcac cagatggaac aatagcacaa tttaatcaaa ttgcggctga caacaatgga
      781 aattataatc aaatattgat aagatggcct aatgctacag caaactatgc ttatggcaca
      841 tattccgtcg aaggaattgc tacaaaagaa gacagttatt caataagagc agacatcaaa
      901 tttgttccat ccacttcagt agtaccagtt ccaatccaga gaaatttgat agcaacagtt
      961 tatgcgccac aaactgctgc tgtaaatgaa accattagga tttttgttca agtaacaagc
     1021 gatggtcaac ttgttacagg ttctccttca atagttctag catattccca tgtccatcct
     1081 ccttcgggtg acgtaattga tcttactaat acatttcaaa ctcttcatca gggactctat
     1141 tatactgatt ttactcctac acaggaaggt acatacgtct tccatatggt agccaatgat
     1201 caaggatatg tttctcaaag ttctgctgtc acactggtaa tcaaacaaag catagaaggt
     1261 atttcaaatc agataatccg attaaataca gtcctagaaa ctacctctag cgaacttggt
     1321 aatctaaaaa cccaaattca gggctttgga gaagccttga acacaagtca gaactcaatc
     1381 acacaagcta atcaaaacat gaacaagagt gtaagttcaa tgtccgattc ggtaaaaaat
     1441 ctcgaagcag cttctggcca gtttaactct ttatttttgc ccgtggttgc attgatagca
     1501 gtaatcattg cattacagat tacaattctt gcaaggcgaa gataacacgc atggtaaaaa
     1561 aattacttgc catgtcaaat acggggattt ttctgatatg ccttttactt ttctcgatgt
     1621 ttccaaaatc tgttgatgcg ttttacgatc ctgatattcc acggccaaac tcagttgtta
     1681 tgcaatataa ttctggccta attcattttc aaccagtttc tgatcaaaat cctctgcaaa
     1741 gatatatcgt ctttggttct ggaccattat ctgatattac ttctgaagct aagaatgtaa
     1801 tttatggaga aagttcaagt catggttctt ttgctatagg aatatttcaa caaaatgagg
     1861 tagcaagcct aaaactcaaa ggttataatg taattgaaga catgccacta gaatttgatt
     1921 ctataccatc taaaatttca cacattcacg atgctgcaag agtagatgaa attcttggca
     1981 ccgataaagt aatcacaaag tatcattaca ctggggcagg catcaagata ggaattgtag
     2041 atcaaggaac agatttttca aatcctgaca tgcaagattc tgttgcacgt ggcggaagaa
     2101 acattccaat tatgattgat gcagatggac aaggactggt cttaacaaac caaactttca
     2161 ttgccaatat caacaattat ggcgtaattt caaactatac taatcatatt ccaaaaggta
     2221 ttacttcata tgtttatgta acctcacaag gagtttttat taatttaagt aacaatggtc
     2281 aaggcacaac catacaagct tttaattcaa attatccaaa aggtggtact ccggtgataa
     2341 acggaacagt ctctaacgac tacaagatag gtaaagactc aagacattat attgtatcaa
     2401 aaagcggcat ctatcatttt
//
LOCUS       DASPUS010000203         4342 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_378350, whole genome shotgun sequence.
ACCESSION   DASPUS010000203 DASPUS010000000
VERSION     DASPUS010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4342)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4342)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4342
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378350"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VEJ68_04740"
     CDS             complement(<1..317)
                     /locus_tag="VEJ68_04740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantothenate/pantothenate synthetase
                     family protein"
                     /protein_id="HXX06112.1"
                     /translation="MLIPRSHPRAASLYIREKLVHGYKNGLVVEEGLMAHGRGEMFDY
                     LIGEKTTKYSQDAIRAAAQEMLLARSSVISVNGNFAALCPKEIVQLSKITGAKIEVNL
                     FYA"
     gene            complement(317..1201)
                     /locus_tag="VEJ68_04745"
     CDS             complement(317..1201)
                     /locus_tag="VEJ68_04745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GHMP kinase"
                     /protein_id="HXX06113.1"
                     /translation="MQAVAFAPGHITGFFKAEVEQSRPELKGSIGAGFSIKEGVTTKV
                     KVTTSEQPGFKITVTGYKSDNTQVSDYVAKEFLKLAKRNYFLDIVHDSAIPVGYGLGS
                     SGAVALSLAFALNKALGTNLSRTQVGQIAHNAEIYCKTGLGTVLSSYHGGFEIRTRHG
                     APGIGSLRKIHSDYIAIVICFSPISTKKIIGTELSKINGLGGKMVSRLLKTRDQMEFL
                     DMSLEFAKYVDVITPTMQQVIDDLKKHGFKSGVAMFGETIFTLVPESRQSQVLDILEK
                     YNGIIIKSEIDKSGVRVS"
     gene            1264..2238
                     /locus_tag="VEJ68_04750"
     CDS             1264..2238
                     /locus_tag="VEJ68_04750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate uptake regulator PhoU"
                     /protein_id="HXX06114.1"
                     /translation="MTKFIRRLQKIGSSILVSLPIEWVEANKLEKSDEVEIETGANSV
                     SITPTGGSKIPKDVIIEYPVSKGENISADLTGAYLLGYDIIKIKGKSPISVEDRERIR
                     GLMRRLVGMEIVDEDASNVNVQFLLDATTLSPDKILKRMSSIALGLFRDTINSLISED
                     KTVLQTIPSRDDEIDRQYFLLVRLIRSALVDKKLATALNLGNIDILDYRIAANLLETA
                     GDAIVELANSIQDLSSTKTELKRFHTMAIEIENIHEKSITSFIENNRLLAIEAIKLQR
                     NYQKKVSDLRSTFEPKKQISTQLDLVYTLEKLARCWADVADLVKPVYM"
     gene            complement(2229..2738)
                     /locus_tag="VEJ68_04755"
     CDS             complement(2229..2738)
                     /locus_tag="VEJ68_04755"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012216098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HXX06115.1"
                     /translation="MKKKIFKGKILSLNLYTLSIKKRKVTREVIEHRGAAAILAIEKN
                     KVLLVKQHRFPHGYVLEIPAGTLERGENPRHCAFRELREETGYEAQKMAPLVKFYPSI
                     GYNTEVISCFLASGIKKNHSLELDEDEIISVVKIDLKKVLKMILSGKIVDSKTICAVL
                     TYVMKKNHI"
     gene            complement(2764..3669)
                     /locus_tag="VEJ68_04760"
     CDS             complement(2764..3669)
                     /locus_tag="VEJ68_04760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012216097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AsnC family transcriptional regulator"
                     /protein_id="HXX06116.1"
                     /translation="MDKLDMQILSRLVDNCRTPDRQIGNEIGISGVSVKSRIQKMIKK
                     KIIGEFALKIEPPVLGYSVLYFVVTGKELDDILNKIRLVGEPFFVVPCVGGITVCSIV
                     VKDDPVQKMELAKNLLRDVRVLSIFEAKNPEVRSDLTKTDIEIIDILLKDPRLKIEEI
                     AKLSGFSTKTVARSIEKLQNDEAIQFTLIYDPREMLGYIPFAILTAVPGDIKKTLQKL
                     KKEFSIHFLQRPFVHMNYIVLFMFSDNLFKIDDIIQRVSSIEGIHAADLFIPKSITFP
                     QKWVKDSIEQTKKSKKLHLMHEIHS"
     gene            3787..>4342
                     /locus_tag="VEJ68_04765"
     CDS             3787..>4342
                     /locus_tag="VEJ68_04765"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HXX06117.1"
                     /translation="MDYRAQIGIRFITRRKGSLIAACLAIAIAILVVQVNSVIFQGLY
                     DAIVRDLVNYRFGHVFISKRGDFITRSDFMLVNWLQRIPWVQAAAPRLEYSALSINST
                     VNGQLIQDLNAPVPVLGVKPAWDVAASTLSQTVKGEYISTRDSIVLGQLVQRDLGYPQ
                     IGDTVKIKFKDQFGKDVLKRFTIVG"
BASE COUNT         1333 a          810 c          755 g         1444 t
ORIGIN      
        1 cttgcataaa ataaatttac ttcaatcttt gctcctgtta tctttgatag ctgtactatt
       61 tcttttgggc agagtgcagc aaagttaccg ttgacagata ttacggatga tcttgccaaa
      121 agcatctctt gtgcagcagc ccttattgca tcctgagagt attttgttgt cttctcgcct
      181 atgagataat caaacatctc accccttcca tgtgccatga ggccttcctc taccactagg
      241 ccatttttgt atccgtgtac cagtttctct ctaatgtata gggatgcagc cctaggatgt
      301 gatcttggaa ttaacactaa gagaccctaa ctccgctctt gtctatttct gattttatta
      361 tgattccgtt atatttttcc aagatatcaa gaacttgtga ttgtctagat tctggaacaa
      421 gtgtaaagat agtctctcca aacatggcaa caccagactt gaatccatgt ttttttagat
      481 catcaataac ctgttgcata gttggagtaa ttacatctac atacttggca aattcaagtg
      541 acatgtcaag aaattccatc tggtcccttg tttttaatag tcgtgagacc atctttcctc
      601 ccagtccatt tatcttagat agttcagttc caataatttt tttggtagaa atgggagaaa
      661 aacaaattac tattgcaata taatcactgt gaatttttcg taagcttcca attcccggtg
      721 ctccatgtct tgtcctgatc tcaaaacctc catgatatga tgaaagtaca gttccaagtc
      781 ctgtcttaca ataaatctct gcattatgag caatctgacc cacttgggtt cgagatagat
      841 ttgtaccaag tgccttgttt aatgcaaatg ccaagctcaa ggcaacagct ccactagaac
      901 caagaccata gcctactggg attgcagaat catgaactat gtctaagaaa taatttcttt
      961 ttgctagctt taggaattcc tttgcaacat aatcagaaac ctgtgtgtta tctgacttgt
     1021 atccagttac agttatctta aaaccgggtt gctcagaggt tgtgacttta accttggtag
     1081 taacaccctc tttgatagaa aatcctgcac caatcgaacc tttaagctcg ggccgtgatt
     1141 gctccacctc tgctttgaaa aatccagtta tgtgtccagg ggcaaaggct actgcctgca
     1201 tggtgagttt aaacttggat aaaaatataa aaatgatcat tatattattt atattgatat
     1261 aaattgacta aattcattcg gcgtctgcaa aaaatcggca gcagcattct ggtctcacta
     1321 ccaattgaat gggttgaagc aaacaaactt gaaaaaagtg atgaggtaga gattgagaca
     1381 ggagctaaca gtgtttccat cacacctaca ggtggaagca agattcctaa ggatgtcata
     1441 attgaatatc cagtctcaaa aggagaaaat atcagtgctg atcttacagg tgcctatctt
     1501 cttggatatg atatcataaa aataaaaggc aagtctccaa tctcagttga agacagagaa
     1561 aggattcgtg gattgatgcg gcgacttgtt ggaatggaaa ttgtcgatga agatgcgtct
     1621 aatgttaatg tacagtttct cttagatgca acaacactta gtcctgataa aattctaaaa
     1681 cgaatgagct caattgcgct tggattattt cgagatacaa taaactcact tatatctgaa
     1741 gacaaaacgg tcctccaaac aattccaagc agagatgatg aaatagatag acaatatttc
     1801 ttgcttgtaa gattaatcag aagtgccttg gtggacaaaa agcttgcaac agcactaaat
     1861 cttggaaaca ttgacatctt ggattataga attgctgcga acttgcttga gactgcaggt
     1921 gatgctattg ttgagcttgc taattcaatc caagacttgt catctacaaa aacagagctc
     1981 aaaagatttc atacaatggc aattgagatt gaaaacattc atgaaaaatc aatcacatcg
     2041 tttattgaaa ataatagatt gcttgcgatt gaggctataa aactacaaag aaactatcaa
     2101 aagaaagttt ctgatcttcg ttctacattt gaaccaaaaa aacagatatc aacacaacta
     2161 gatcttgtat atacgcttga aaagctggct agatgttggg cagatgtagc agatctagtc
     2221 aagccagtct atatgtgatt ttttttcatc acatatgtga gtacagcaca gatcgtcttt
     2281 gaatctacaa ttttacctga taaaatcatc ttcaaaactt ttttcaaatc aattttgact
     2341 acagaaatta tctcatcctc atctaattcc aagctatggt tttttttgat tccagatgcc
     2401 agaaagcaac taattacttc agtattgtag ccaattgaag gataaaattt cacaagagga
     2461 gccatttttt gtgcttcata acctgtttcc tctcttagtt ccctaaaggc acagtgtctt
     2521 ggattctctc ctctctcaag agtaccggct gggatctcaa gtacataacc atgaggaaac
     2581 ctatgttgtt ttactaacaa taccttgttt ttttcaatag caagaattgc cgcagcaccg
     2641 cgatgttcta ttacttccct agtaactttg cgtttcttaa ttgataatgt gtagagatta
     2701 agagaaagaa tttttccttt gaaaatcttc tttttcatga tgaattcttg atttttgttt
     2761 atgttatgaa tgtatctcat gcattagatg caatttctta gatttctttg tttgttcaat
     2821 agaatctttg acccactttt gtggaaacgt gatactcttt ggtatgaaaa gatctgctgc
     2881 atgtattcct tctatcgatg aaaccctctg aattatgtca tcaattttga agagattatc
     2941 actgaacatg aaaaggacaa tgtaattcat gtgaacaaat ggtctttgca aaaagtgtat
     3001 ggaaaattct ttttttaact tctgaagagt ttttttgata tctcctggta ccgctgtcag
     3061 tattgcaaag ggaatgtatc ctaacatttc tcgtgggtcg taaattaagg taaattgtat
     3121 tgcttcgtca ttttgtaatt tttcaattga tcgtgctact gtttttgttg aaaatccaga
     3181 cagctttgca atttcttcta tctttaatct gggatcttta agtagtatgt cgattatttc
     3241 aatgtcggtt tttgtaagat ctgatcttac ctctggattt tttgcttcaa aaatacttaa
     3301 cactctaaca tctcttagaa gattctttgc taattccatc ttttgtacag gatcatcttt
     3361 tactacaatg ctacatacag ttatgcctcc tacacaaggc accacaaaaa atggttcacc
     3421 aactagcctt atcttgttta aaatatcgtc aagctctttt cctgttacta caaaatagag
     3481 aacactgtat cctagtacag ggggttcaat ttttagggca aattcgccta tgattttttt
     3541 cttgatcatt ttttggattc tggacttgac gctcacacca gaaattccaa tttcgttacc
     3601 aatctgccta tcaggtgtcc tacaattatc tactaaacga gatagaatct gcatgtctaa
     3661 tttgtccatt ttctatacta tcatctcatt gtcattaata aatagaacat cttgtatata
     3721 taattgtctg attcactaag aaaatgacag ttaaagatta aatatcagac taatacctaa
     3781 ttatttgtgg attatcgagc acaaataggt attagattta tcacaagacg caaaggtagc
     3841 ttgattgctg catgtcttgc aatagcaatt gcaatactag tagttcaagt aaattcagta
     3901 atcttccaag gtttgtatga cgccatagtt cgtgaccttg taaattatcg attcggacat
     3961 gtattcatat caaaacgagg agatttcatc acaagatctg atttcatgtt ggttaactgg
     4021 cttcaaagaa ttccatgggt acaggcagct gcaccacgac ttgaatattc tgcactatcg
     4081 atcaattcaa ctgtaaatgg tcaacttatt caagatctca atgcacctgt tccagtactt
     4141 ggtgtaaaac cagcatggga tgtagcagca tctaccttat ctcaaactgt aaaaggagag
     4201 tacatttcaa cgagagactc gatagtcttg ggtcagttag ttcagagaga tctcggttat
     4261 ccacaaattg gtgatactgt aaagataaaa ttcaaagatc aatttggtaa agatgttctt
     4321 aaaagattta caattgttgg ga
//
LOCUS       DASPUS010000204         2107 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_941820, whole genome shotgun sequence.
ACCESSION   DASPUS010000204 DASPUS010000000
VERSION     DASPUS010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2107)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2107
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_941820"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..666
                     /locus_tag="VEJ68_04770"
     CDS             <1..666
                     /locus_tag="VEJ68_04770"
                     /EC_number="2.5.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase"
                     /protein_id="HXX06118.1"
                     /translation="DHDIARHYSNYLEGSFTLDDNELADKEIHRLGNVLVPMKSYGPL
                     IEEKMQSFLERSYKSGKKEMSTSDISKMIGENLGEDSFLYWANKNNIPVVVPGIMDGA
                     VGSQIWMFTQKHNDFKLNVVADGDLLSELIFKAKKSGALMIGGGISKHHTLWWNQYRN
                     GLDYAVYITTAQEFDGSLSGALVREAISWGKVTQNAKQTTIHAEATTILPFLYSALLS
                     RIK"
     gene            complement(659..1384)
                     /locus_tag="VEJ68_04775"
     CDS             complement(659..1384)
                     /locus_tag="VEJ68_04775"
                     /inference="COORDINATES: protein motif:HMM:NF025054.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HXX06119.1"
                     /translation="MSGLGNNFVISEVEENDLGFSGLWSQPANLECGTMFLNSELPND
                     IFFNKLTNITCISESMIDEALAVFHKNKTMPFVYSLNYSELETMLQKRNFIHHDTQYA
                     LKKSDSTTKASNAHRITNADSMLWSKTFCEAYDCYEWISPVNRIVKKTLSSIEYYVDE
                     SISSCMALYEKNSILGLYCLGTIPSMRRKGLADSLIAFAQNKVNQRKLKFLMLETYEK
                     DNLLDFYSKLGFQEIYQKNIFTI"
     gene            complement(1357..>2107)
                     /locus_tag="VEJ68_04780"
     CDS             complement(1357..>2107)
                     /locus_tag="VEJ68_04780"
                     /inference="COORDINATES: protein motif:HMM:NF013565.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HXX06120.1"
                     /translation="NGNIYLDTSKLHTYGLLSKQSSEQLLLHRLDIGPNKKSQNDIML
                     WNCSDDFYFSWKSKFGTGIPWWHMQDTSVAIENFGNNYDIHGGARELSFPHHEAHLAQ
                     YQLLTKMEKPVKIWMHVGLVLSDGEKMSKSLGNVVWSRDFVYKYGQNLLRLYLFTTHY
                     RNDIDFKEDNLMTTKNLLEKIMKSSKKTLENTDAQITKLIDDFFNSLDDDLNSPRAIE
                     IFEDVCTRVINGSSISGNDFDRICQVLGIIL"
BASE COUNT          681 a          368 c          378 g          680 t
ORIGIN      
        1 gaccacgata ttgcaagaca ttattcgaat tacttggaag gctcgtttac tcttgatgat
       61 aacgagttag cagacaaaga aattcacaga ttaggaaacg ttttggtgcc tatgaagagc
      121 tatggaccat tgatagagga gaaaatgcaa tctttcttgg aaagatcata caagagtgga
      181 aaaaaagaaa tgtcgacaag tgacatttca aaaatgatag gcgaaaatct cggcgaagat
      241 tcgtttttgt actgggcaaa caagaataac ataccagttg tggttccagg cataatggac
      301 ggagctgtag gcagtcaaat ctggatgttt acacaaaaac ataacgattt taaactaaat
      361 gtggtagcag atggagattt actttctgaa ctcatcttta aagcaaaaaa atctggtgcg
      421 ctcatgatag gtggaggtat atcaaaacac cacaccttgt ggtggaatca gtacagaaat
      481 ggattagact atgcggtata catcacaacg gctcaagagt ttgatggaag tctaagcggt
      541 gcactggtaa gagaagcaat ttcatgggga aaggtcacac aaaacgcaaa acagacaacc
      601 atacatgcgg aggctacaac catcttgcct tttctttatt ctgcgcttct ttctagaatc
      661 aaatagtgaa aatgttcttt tgataaattt cttgaaaacc tagttttgaa taaaaatcaa
      721 gtaaattatc tttttcatat gtctctaaca ttagaaattt tagttttcgc tgatttacct
      781 tattttgtgc aaatgcaatt aatgaatctg caagcccttt tcttcgcata cttggaattg
      841 taccgaggca gtatagtccg agtatagagt ttttttcata caatgccata catgagctaa
      901 ttgattcgtc tacatagtat tcaattgaag agagtgtttt ttttactatc ctgtttacag
      961 gtgaaatcca ttcatagcaa tcatacgcct cgcagaaagt cttagaccat aacattgaat
     1021 cagcattagt tattctatgt gcattgctgg cttttgtagt agaatcagat ttctttaaag
     1081 catattgagt atcatggtgt atgaagtttc gtttttgtag cattgtttcc aattcagaat
     1141 aatttaaaga atatacgaat ggcatggttt tattcttgtg aaaaactgca agcgcttcat
     1201 caatcattga ttcgcttatg caggtgatgt ttgttaattt attaaaaaaa atatcatttg
     1261 gaagttctga gttaagaaac attgtgccac attccagatt tgctggttga gaccaaagac
     1321 cactaaagcc aaggtcgttt tcttcaacct cagatattac aaaattattc ccaagacctg
     1381 acatatacga tcaaaatcat tgccgcttat actgcttcca ttaattactc tagtacaaac
     1441 atcttcaaag atttcaatcg cgcgaggaga attcaagtca tcatctaacg aattgaaaaa
     1501 atcatcaatt agttttgtta tttgtgcatc agtattttct aatgtttttt tgcttgattt
     1561 cataattttt tctagtagat tttttgtggt cataagatta tcttctttaa aatcaatgtc
     1621 attgcgataa tgagttgtaa acaagtataa tctcaacaaa ttctgtccgt acttgtacac
     1681 aaaatccctt gaccaaacaa cattgccaag agacttggac atcttctcac catctgagag
     1741 tacaagaccc acatgcatcc aaattttgac tggtttttcc atttttgtaa gtagttgata
     1801 ttgtgcaagg tgggcctcat gatgtgggaa agaaagttca cgagcaccgc catgtatgtc
     1861 atagttattt ccaaaatttt ctattgcaac agatgtatcc tgcatatgcc accatggaat
     1921 tcctgttcca aacttactct tccatgaaaa ataaaaatcg tctgaacaat tccacaacat
     1981 gatatcattc tggcttttct tatttgggcc aatatctagc ctatgaagca acaattgttc
     2041 agaagattgt ttcgataaca gaccataggt atgcaatttg gacgtatcaa gatagatatt
     2101 cccattt
//
LOCUS       DASPUS010000205         3425 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1204208, whole genome shotgun sequence.
ACCESSION   DASPUS010000205 DASPUS010000000
VERSION     DASPUS010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3425)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3425
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1204208"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(137..1027)
                     /gene="map"
                     /locus_tag="VEJ68_04785"
     CDS             complement(137..1027)
                     /gene="map"
                     /locus_tag="VEJ68_04785"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II methionyl aminopeptidase"
                     /protein_id="HXX06121.1"
                     /translation="MQINDYINAGKIASEVRENARKKYHVGATLFEICESIEKEIEQK
                     GGKCAFPVNTSLNEIAAHYTAEPNDNKVVKDTDLLKIDLGVQINGYIADTAVTVCYDP
                     KYDYLVQAAESALREAISIIRVGTKSSDVGKIIEITVKQMGGTPIANLSGHSLEQYTI
                     HAGKSVPNIWSIGSFLFQSTEAYACEPFVTTPEGLGFVREGKVRNIFSLATRKKTKDD
                     AANKLLDFIWQKFNMLPFALRWLMPEYDEKTARKLLDTLIQNKTVRSYPILVEANNQQ
                     VAQAEHTFIPQEKGVTVTTI"
     gene            1112..1185
                     /locus_tag="VEJ68_04790"
     tRNA            1112..1185
                     /locus_tag="VEJ68_04790"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1146..1148,aa:Pro,seq:tgg)
     gene            1356..1592
                     /locus_tag="VEJ68_04795"
     CDS             1356..1592
                     /locus_tag="VEJ68_04795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06122.1"
                     /translation="MVGVSIKSIENNEKQNYTAKSDSTGMMERIFPWLQSNVASNVDY
                     TKNAKLFAEQTKDKTLVTQTVGKDNLWRHIVEKV"
     gene            1817..2074
                     /locus_tag="VEJ68_04800"
     CDS             1817..2074
                     /locus_tag="VEJ68_04800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010190714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06123.1"
                     /translation="MAFERREILLILGVFCLMIGMMAFLAPIFAIAIAVLTYFGMKSF
                     VKWRKKQIRKAMGEGVCAVCGSRIADNQCPNCDVSKDSKAL"
     gene            2229..>3425
                     /locus_tag="VEJ68_04805"
     CDS             2229..>3425
                     /locus_tag="VEJ68_04805"
                     /inference="COORDINATES: protein motif:HMM:NF013125.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lamin tail domain-containing protein"
                     /protein_id="HXX06124.1"
                     /translation="MRHLRSYSIVSFLILILIGQTYGAFGQTSPIANHVVINEADINP
                     AGDDTKLPIDWVELYNPTSSAVSIGGWTISATSGLKQTLTIPANTVIQSNQFLIYTSG
                     PLWFPHAGAVIQLTSSDGTLVDQTPPLTDFQGDSNSWQRIYDGYESTGTISDWVFKLG
                     TPGSSNGQPPTTTIAPQTSMTFSIDKSSYIFGDTIMMSGKVSQLSADPSTGYPLSINL
                     VVSGPGYQKTLTLFPNNNLQFSTSLKTDPLLGFQEGNYKISASYGSDSASASFVLSSA
                     PFIAPPPPAANTLFISTDKPYYTISDSIALSGNVSQVIPLTPVTYKVYDPTGAMIYQG
                     NLFPDTQGKFTTFNPYQQHVSASGIFINTISPIYGVYNVIANYGTVTAKTSFALVAQS
                     IQTATIT"
BASE COUNT         1033 a          647 c          634 g         1111 t
ORIGIN      
        1 attgaaaaat gtaatggttg caatgctgta gtaaaaagaa aatttctgga aggcgattat
       61 gtttttaaaa ctatgaacaa atgcaacaac tgcaataatg gtcaaatgat gatatcgaag
      121 atctttggtg aagttattaa atagtggtca cagttacgcc tttttcttgt ggaataaaag
      181 tgtgttctgc ttgtgccact tgttgattat ttgcctctac aagaattgga taagatctga
      241 ctgtcttatt ttgaataagc gtatcgagaa gctttctagc tgttttttca tcgtattctg
      301 gcatgagcca tcttaatgca aatggtaaca tgttaaactt ttgccatatg aaatcaagca
      361 acttgtttgc cgcgtcatct tttgtttttt ttcttgttgc cagtgaaaaa atatttctta
      421 ccttaccttc acgtacaaag cccaaaccct ctggtgttgt gacaaatggc tcacatgcat
      481 aagcttctgt tgactggaac aaaaaagatc ctatagacca tatgtttggg acagactttc
      541 ctgcgtgaat tgtgtactgt tcaagagaat gcccgctcaa atttgcaatc ggtgttcctc
      601 ccatttgctt tactgtgatt tctattattt ttccaacatc acttgatttt gttccaacac
      661 gtattattga aattgcttct cgtaatgccg attcagctgc ttgcacaaga tagtcatact
      721 ttggatcata gcatactgtt actgccgtat ccgcaatata tccattaatt tgtacgccta
      781 aatcgatttt tagaagatca gtatccttga caaccttgtt atcatttggt tctgcagtat
      841 aatgagctgc aatctcatta agacttgtgt tcacgggaaa tgcacacttt cctcccttct
      901 gttctatttc tttttcaatt gattcacaaa tttcaaacag tgttgctcct acatggtatt
      961 tttttcttgc attttctctc acttctgacg caattttacc tgcgtttatg tagtcattga
     1021 tctgcattgg tttagtcttg ttttggattg ttatttaaaa taatcatgcc atgagaagct
     1081 taaattgggg acatttttgt gcaatcacat cgggatcgtg gtctagcttg gcatgattcg
     1141 ggttttgggt acctgaggtc gtcggttcaa atccggccga tcccattttt aatttatcat
     1201 caagttagtg agattggatt cattgaaaaa ataatgaaaa aagttggaat taaaatgaaa
     1261 aacatttttt ccatttttgg aaaaagaaac acatctggta aatcccaatt ttggcagacc
     1321 agacttttat acaaacatgt ctcaattaag attacgtggt tggtgtgtca ataaagagca
     1381 tcgaaaataa tgaaaaacaa aactacacag caaaaagtga ctccacaggc atgatggaaa
     1441 gaatctttcc atggttgcag agtaacgtgg catctaatgt tgattataca aaaaatgcca
     1501 agttgtttgc agaacagaca aaggataaaa ctcttgtaac gcaaactgtc ggtaaggata
     1561 atctctggcg tcacattgta gaaaaagtgt agatgcattt ttatttttaa atttgtccta
     1621 tctgtctctt agactttgta gttttcatat ttactttgtg gcaaattttt tcaattagtt
     1681 attatctggc tttcacagat catgataagc caggcgatga agaagagtta gagacatgat
     1741 taaaaaatga atgtgaattc agtgactctg agtactggca tacctattta tggtaattta
     1801 atggccttag aatggtttgg catttgaaag acgcgaaatt ctgttaattc ttggtgtatt
     1861 ttgtttgatg ataggaatga tggctttcct ggctcccata tttgctatag caattgcggt
     1921 tttaacatat tttggaatga aatcatttgt aaagtggaga aaaaagcaaa ttcgaaaagc
     1981 catgggagag ggagtctgcg ctgtttgtgg ttcaagaata gctgataacc aatgtcccaa
     2041 ttgcgacgtt tcaaaagata gtaaggcgtt atgactttca attcgagata aattctacga
     2101 ataacttata atgattttca gggtagtttt accatgcaac gggagacata ttggggatta
     2161 acaactagct caacttttcc acaatcaaca cctaaaattg ttatctcagg catgaaatgg
     2221 tagtacagat gagacacctg agatcatact ctatcgtaag ctttctaatt ctaattttaa
     2281 ttggacaaac atatggtgca tttggtcaga ctagtccaat agcaaaccat gtagtgataa
     2341 acgaggctga tattaatcca gcaggagacg atacaaaact tccaattgac tgggttgaat
     2401 tatacaatcc aacaagcagt gctgttagta tcggggggtg gactatcagc gcaacaagcg
     2461 gactcaaaca aaccttgacg attccagcca acacggtgat tcaaagtaat caatttttga
     2521 tttacacatc tggcccattg tggtttccac atgctggtgc tgttatacaa cttacaagct
     2581 ctgatggcac attagttgat cagactcctc ctttgaccga ctttcaagga gattctaatt
     2641 catggcaaag aatctatgat gggtatgaaa gcacaggaac aataagtgat tgggttttca
     2701 agctaggaac tccaggttca tctaacggcc aaccacctac aactacaatt gctccccaaa
     2761 ctagcatgac tttttcgatc gataaatcta gttacatttt tggtgataca ataatgatga
     2821 gcggcaaagt ttcacaactc tccgctgatc cttctacggg atatccactg tcaataaact
     2881 tagttgtgtc aggtcccggt tatcagaaga ctttaacatt attcccaaat aataatcttc
     2941 aatttagtac gtcattaaag actgatccac tgctgggttt ccaagaaggc aactataaga
     3001 tctctgcatc atatggatca gactctgcat ctgcttcatt tgttctgagc tctgcaccat
     3061 ttattgcacc tccgcctccc gcagcaaaca cgcttttcat atctacagac aagccatatt
     3121 atacaatctc agattcaatt gctctttcgg gaaatgtatc tcaggtgatt ccacttacac
     3181 ctgtgacata caaggtatat gatcctacag gcgcgatgat atatcaaggc aacctatttc
     3241 cagacactca aggtaaattt acaactttca atccctatca acaacatgtc agtgcatccg
     3301 gaattttcat aaatacgatt tccccaattt acggagttta caatgtcatt gcaaactatg
     3361 gaactgttac tgcaaaaact tcctttgcgt tggttgcaca aagtatccaa accgccacaa
     3421 taact
//
LOCUS       DASPUS010000206         3255 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1754172, whole genome shotgun sequence.
ACCESSION   DASPUS010000206 DASPUS010000000
VERSION     DASPUS010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3255)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3255
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1754172"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..192
                     /locus_tag="VEJ68_04810"
     CDS             <1..192
                     /locus_tag="VEJ68_04810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HXX06125.1"
                     /translation="VEGWKRGKAFVFYPERCISDGACIGVCPTKAIFWMRPMDFTPGQ
                     PVPLYRNSVFVKGWTELAE"
     gene            272..766
                     /locus_tag="VEJ68_04815"
     CDS             272..766
                     /locus_tag="VEJ68_04815"
                     /EC_number="3.1.3.16"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013482545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004721 - phosphoprotein phosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA];
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dual specificity protein phosphatase 23"
                     /protein_id="HXX06126.1"
                     /translation="MSKPGNIWRKVHGKITRKPTNFGWLINNKLAGSGMPTSSSEVDW
                     VLKQGIKSIITMTEDALPEQWIKEIKYLHVPTEDLSAPDMDKIDQAVDFIDKQIQDNE
                     PVMVHCAAGIGRTGTILACYLVKYRKLSATDAIEKVRKERPGSIQSESQEIAIGLYSK
                     FVCK"
     gene            complement(767..922)
                     /locus_tag="VEJ68_04820"
     CDS             complement(767..922)
                     /locus_tag="VEJ68_04820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06127.1"
                     /translation="MAKFDGIRGQELLEVEDKSERENEITLIFKDNRFLFIKLENGKM
                     VTTSIPE"
     gene            complement(952..1491)
                     /locus_tag="VEJ68_04825"
     CDS             complement(952..1491)
                     /locus_tag="VEJ68_04825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06128.1"
                     /translation="MTENNTISEVLLERSADKFSVNDMITFNVKFSVTGALREAFNEK
                     NWERAYNNHDNVLKLKFGIKLFSGGLRKREIGNPIDTYKKVALFWTRNPKLTQMAEKK
                     VWVQISKNFEPQIPMNQADAQQSLLDFDEKMQFKASELGIGKHKVGAEIFVSWLKHDY
                     AEPFDGKAHSKEIEVEITK"
     gene            1538..1819
                     /locus_tag="VEJ68_04830"
     CDS             1538..1819
                     /locus_tag="VEJ68_04830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012216139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpoL/Rpb11 RNA polymerase subunit family
                     protein"
                     /protein_id="HXX06129.1"
                     /translation="MDVQVKKTSSKEVLLDIRKSDISTLYIVQHELLKDPSVEFAGVV
                     LKHPLTKEYAMRVNTSKGNPIKEVEKATKAAIDYSDELKKAINSKLKGV"
     gene            1820..2137
                     /locus_tag="VEJ68_04835"
     CDS             1820..2137
                     /locus_tag="VEJ68_04835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription factor S"
                     /protein_id="HXX06130.1"
                     /translation="MKFCPKCEARLKLDSSDSEFVCPKCGHSEKGTKVARQIKSEAGP
                     STINVLDENEKTETLPVIKIECGKCGHNEAVWWMLQTRSADEPTTQFYRCVKCSFTWR
                     NYA"
     gene            2173..2919
                     /gene="pcn"
                     /locus_tag="VEJ68_04840"
     CDS             2173..2919
                     /gene="pcn"
                     /locus_tag="VEJ68_04840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030337 - DNA polymerase processivity
                     factor activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proliferating cell nuclear antigen (pcna)"
                     /protein_id="HXX06131.1"
                     /translation="MVFSAKTVGSDEWKAVISAISTLVEEATFEATGEGIAFRGMDPS
                     HVALIDIAWPNSAFEKYACDQDVKFGVRIDEFSKLIKRADKKESIEISISEENQLLVT
                     IGKNKKYKMRLIESSATDTPLPKITYNAKIGVTSAEFDKILGDIQVVSEYLSITANTT
                     KAEFSGRGDSGEAVVTLEKGMPEMPEIEVKEESTATYSLEYLNSIVKAVGTVAGTVVC
                     EYSSKMPLRLEFKVANIGRIHFYLAPRVES"
     gene            2955..3236
                     /locus_tag="VEJ68_04845"
     CDS             2955..3236
                     /locus_tag="VEJ68_04845"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06132.1"
                     /translation="MKLVLKFGGTSISSVANIRHVANLIKSLSKEDKIIPVFSAISGV
                     TDDLIRIANHVQDRNKEAANSLVKKIIKTHLDIANQCVKNPRIRNTKCD"
BASE COUNT         1109 a          561 c          618 g          967 t
ORIGIN      
        1 gtagagggct ggaagagagg taaagcattt gtattttatc cagagcgctg catctcagac
       61 ggtgcatgca tcggtgtttg cccgacaaag gcaatcttct ggatgagacc aatggacttt
      121 actccaggac agccagtacc actatacaga aactctgtat tcgtcaaagg ttggactgaa
      181 ctagcagagt aagtctgaca attaacttct ttttcttatt ttaaaatcaa acttcgtttt
      241 ctaaatatat ggaatccatc catatctaac agtgagcaaa ccaggaaata tttggagaaa
      301 ggtacatggt aaaattacta gaaagccgac aaactttggt tggttaatca acaataaact
      361 tgcaggaagt ggcatgccaa cttcatcctc agaggtagat tgggtgctaa aacaaggaat
      421 caaatcaata attactatga ctgaggacgc tcttccagaa caatggataa aagaaataaa
      481 atacttacat gtaccaaccg aagatctttc agcacctgat atggataaga ttgatcaagc
      541 ggttgatttc attgataaac aaattcaaga caatgaacct gtgatggtac actgtgcagc
      601 gggaatagga agaactggaa ccattttggc ctgttatctt gtaaaatatc gtaagctatc
      661 tgcaactgat gctatagaaa aagtacgaaa agaaaggccc ggttcaatac agtctgaatc
      721 gcaggaaatc gcaataggat tgtattccaa gtttgtttgt aagtaactac tcaggtattg
      781 atgtagttac catttttcca ttttcaagct tgatgaaaag aaacctgttg tctttgaaga
      841 taagggttat ctcattttct ctttctgact tgtcctcgac ttcaagtaat tcttgtcctc
      901 ttatgccatc aaattttgcc ataacattgc tccaataatt ccatttatat cctatttggt
      961 aatttcaact tcaatctctt tggaatgtgc cttaccatca aaaggttccg cataatcatg
     1021 ttttagccaa gaaacaaaaa tttctgctcc taccttgtgt tttccaattc ctaattctga
     1081 tgctttgaat tgcattttct catcaaagtc aagcagcgat tgttgtgcat ctgcttgatt
     1141 cattggaatt tgtggctcaa aattctttga tatttgaacc caaacctttt tctctgccat
     1201 ttgtgtcagt tttggatttc gtgtccaaaa aagagctact ttcttgtaag tgtctatagg
     1261 atttccaatc tcacgttttc ttaatcctcc agaaaagagc ttgattccga attttaattt
     1321 taatacatta tcatgattat tgtacgccct ttcccaattt ttctcattga atgcttcccg
     1381 gagtgctcct gttacagaga atttcacatt aaatgtgatc atatcattta cgctgaattt
     1441 gtcagcagat ctttctaaca aaacctcgct tattgtgttg ttttcagtca accattcgta
     1501 atgatttata tcctcaataa gtattttttt gacttacatg gacgttcagg tcaaaaaaac
     1561 ttcttcaaag gaagttctgt tggatataag aaaatccgat attagtacat tatacatagt
     1621 ccaacatgag ttactcaaag acccctcagt agaatttgca ggtgtagtcc taaaacaccc
     1681 acttacaaag gaatatgcca tgcgtgttaa cacgtccaaa ggtaatccta taaaggaagt
     1741 tgaaaaggct accaaggcag caattgatta ctctgatgaa ttaaaaaaag caatcaattc
     1801 aaagctaaag ggtgtctaga tgaaattttg cccaaaatgt gaagcccgtt taaagctaga
     1861 cagttctgat tcagaatttg tatgtccaaa gtgtggacat agtgaaaagg gtacaaaagt
     1921 ggcaaggcag ataaaatcag aagccggtcc atccacaatc aatgttcttg atgaaaacga
     1981 aaaaactgaa acattaccag tgataaagat tgaatgtgga aaatgtggtc ataacgaagc
     2041 ggtttggtgg atgttgcaaa ctagaagtgc agatgaacca accacccaat tctatcgttg
     2101 tgtaaaatgt agttttactt ggagaaacta cgcataaggt ttaacttgaa catgctagac
     2161 atgtgaataa gtttggtatt ttctgcaaaa actgtaggtt ctgatgaatg gaaggcggta
     2221 atatctgcta tctcgacatt agttgaagaa gccacctttg aagctacagg tgaaggtata
     2281 gcttttagag gaatggatcc atcacatgtt gctctaattg atattgcttg gcctaactct
     2341 gcatttgaaa aatatgcttg tgaccaagat gtaaaatttg gagtaagaat agacgaattt
     2401 tctaaattaa ttaaaagagc tgataaaaaa gaaagcatag agattagtat ttcagaagaa
     2461 aatcaacttc tggttaccat tggaaagaat aagaaataca aaatgcgatt gatagaaagt
     2521 tcggctaccg atacccctct gccgaagatt acctacaatg caaaaatagg agtaacttct
     2581 gctgaatttg ataagatact aggagacatc caagtagtct cagaatatct ctcaattact
     2641 gctaatacaa caaaagcaga attttctgga agaggagact cgggtgaggc cgttgtaact
     2701 cttgaaaaag gaatgcctga gatgccagaa atcgaagtta aagaggaaag tacagcaact
     2761 tatagtttgg aatatctaaa cagcatagtg aaggcagttg ggacagttgc tggtaccgtt
     2821 gtgtgtgaat actcaagtaa gatgccatta agactagaat tcaaagtggc aaacataggc
     2881 agaatccatt tctatttggc tcctagagtt gaaagttaaa agaatttaag gataataaaa
     2941 tcaggtataa tgatttgaag ctagttctaa agtttggtgg aacatcaatt tcctctgtag
     3001 cgaatatacg acatgtagct aatcttataa aatcactttc aaaagaagat aagataattc
     3061 ctgttttttc agctattagt ggtgtcacag acgatctaat tagaatagca aatcatgtac
     3121 aagatagaaa caaagaagct gcaaactctc tagtaaaaaa aatcattaaa acccacttag
     3181 atattgcaaa ccaatgtgta aaaaatccaa gaataagaaa tacaaaatgc gattgataga
     3241 aagttcggct accga
//
LOCUS       DASPUS010000207         4584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_107364, whole genome shotgun sequence.
ACCESSION   DASPUS010000207 DASPUS010000000
VERSION     DASPUS010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4584)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4584
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107364"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..785)
                     /locus_tag="VEJ68_04850"
     CDS             complement(<1..785)
                     /locus_tag="VEJ68_04850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HXX06133.1"
                     /translation="MSLTPQEFDYLAKKIGRKPNPVELQIVAAEWSEHCSYKSSKKHL
                     KMLPRGGKRVISGPGYDSGVLDVGDGYVVTVHIESHNHPSAVEPYGGAATGVGGVIRD
                     ILSAGTRPIAILDGLRFGDIENDTHSRWLFKNAVRGIADYGNCLGIPTIGGEIEFDKC
                     FTNYALVDVAAIGFGKKEKLIKNSADAGDFVVLVGGSTGRDGIGGSQFASDTLESMNR
                     SAVQIPDPFIEKLLIEAILEARNQGCIKAMKDLGGGGLSCAIS"
     gene            complement(782..1462)
                     /gene="purQ"
                     /locus_tag="VEJ68_04855"
     CDS             complement(782..1462)
                     /gene="purQ"
                     /locus_tag="VEJ68_04855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HXX06134.1"
                     /translation="MRVAVIVFPGSNCDRDMHHVLTDVFKLESKLVWHTDTLPTDVDA
                     IVLPGGFSYGDRLRAGVIAAHSPVISDIKKMAEKGMPILGVCNGFQILVEAGLLPGAL
                     LKNTSLSFICKWTEIIVKNNKTPFTNKLKLGQKIPIAVANGEGRYYADKETLQTLKKN
                     NQIVFTYADDINGATMKIAGICNKQGNVVGMMPHPERSAEQILNPKNAKPASLIFESL
                     LNALGVTA"
     gene            1561..2163
                     /locus_tag="VEJ68_04860"
     CDS             1561..2163
                     /locus_tag="VEJ68_04860"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HXX06135.1"
                     /translation="MLRVIGRPPPLTIILIVINSAIFAYGMISGMQEKIISQYGFIPN
                     NLFQYGNHELPDSLLRLFTSMFIHANIVHISFNLFALAYMGGFAERSMGISRFITIYV
                     ASGICGGLLHGLVASYILFNGNDILIGASGAISGILGVAAALGDIRGYYWLAIQVFYV
                     FIGSLTSLSIAFVAHVGGFITGLFVTKIMIRLEQEKRKWY"
     gene            2300..2740
                     /locus_tag="VEJ68_04865"
     CDS             2300..2740
                     /locus_tag="VEJ68_04865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HXX06136.1"
                     /translation="MGLVRDIMIRDVVTINHDKTAKDVALLLAEKGISSLVVVKDGDP
                     IGLVTERDLARKVSTTDKKSSDISLAEIMSANFRWVEPMTPIEDAVQKMLNKNIRRLL
                     VIDNGKLAGIITETDLAKYLRSKLLIEGALDDFTALNRKVVKNG"
     gene            complement(2737..2997)
                     /gene="purS"
                     /locus_tag="VEJ68_04870"
     CDS             complement(2737..2997)
                     /gene="purS"
                     /locus_tag="VEJ68_04870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HXX06137.1"
                     /translation="MHSFIVNVIIENKPGLVDPEGDTILNDLILKDKKISIKKIRSAK
                     MLKFEIEAKNKEFAEKTVMELCNEFRIYNPLVSKVSVETMTV"
     gene            3049..3891
                     /locus_tag="VEJ68_04875"
     CDS             3049..3891
                     /locus_tag="VEJ68_04875"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HXX06138.1"
                     /translation="MSSQFDPIQYKINSKANWNTVAFDYHNNWADKHHGPFKSTREIV
                     SIAGLNPHDKVLDLACGTGAVSKEIIQHLQMDGYLIGVDLSRTALSIAKKSIHNSNVE
                     FLEMDAEHFSFNILFDKILCQYGLMFFPNVEKVLRSVKTILKKDGVFVVAVHGTPEDV
                     PYFSCIMNPILKFIPDIRPEGTPTVHRFGNPDKLNNELTKAGFYNISIKKFNFSYEVE
                     TFEEYWQDYMHSTANSIRPKIESYGDKAVTQIKMEAKQNVSRYEKDGRIIFPWLVLIA
                     SAIK"
     gene            complement(3919..4377)
                     /locus_tag="VEJ68_04880"
     CDS             complement(3919..4377)
                     /locus_tag="VEJ68_04880"
                     /inference="COORDINATES: protein motif:HMM:NF012417.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045735 - nutrient reservoir activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HXX06139.1"
                     /translation="MKKENIGSIKPDAALVSEKRNYFVGKVLLHDISRIIDVKDQKVY
                     FAGFRNGARTKVHYHEGGQILFVTQGKGILVLYKSSITRKKIKIKPITRFLLKEGDMA
                     YIPKHVLHWHGAIEKKNFSHVAFNSFTSRGKEAKTFWYDSDYSTFAVRIK"
BASE COUNT         1442 a          869 c          781 g         1492 t
ORIGIN      
        1 tccgaaatgg cacatgacag gccaccacca cccaagtcct tcattgcttt tatgcaacct
       61 tggtttcgtg cctctaaaat tgcttcaatc aatagttttt ctatgaatgg atctggaatt
      121 tgaacagcag aacgattcat agattcaaga gtgtcagagg caaattgtga acctccaatt
      181 ccgtccctac cagtagagcc acccacaagt acaacaaaat ctccagcatc cgcactattt
      241 ttgataagtt tctccttttt accaaatcct attgctgcca catcaactag agcataattt
      301 gtgaaacatt tatcaaattc aatttctccc ccaattgttg gaatacccaa acagttacca
      361 taatctgcga ttcctcttac tgcattttta aagagccatc gtgaatgagt atcattttca
      421 atgtcaccaa atcgaagtcc gtcaaggatt gcaattggcc tggtaccagc ggataaaatg
      481 tctcttatta cacccccaac tcctgtagca gctccaccgt atggttctac agctgatggg
      541 tggttatgac tttcaatatg cactgtaaca acatacccat cgccaacatc caaaacacca
      601 gagtcgtatc caggtccaga tattactctt ttaccgcctc gtggtaacat cttcaggtgt
      661 tttttagagg atttgtaaga gcagtgttca gaccactcag ctgcaactat ttgtaactcc
      721 acaggatttg gtttgcgtcc tatctttttt gcaagatagt caaactcctg tggggtaaga
      781 ctcatgcagt aacacccaaa gcattcaata atgactcaaa aattaatgat gcaggttttg
      841 cattttttgg atttagaatt tgttctgcag atctttctgg atgaggcatc ataccaacta
      901 cgtttccctg cttattacaa ataccagcaa tcttcatagt ggctccattg atgtcgtcag
      961 catatgtaaa aacaatctgg ttatttttct tcaaagtttg aagggtttct ttatcagcat
     1021 agtatcttcc ttccccatta gccacagcaa taggaatttt ttgtcctagt ttcaatttat
     1081 ttgtaaatgg agtcttgtta ttttttacaa ttatctccgt ccatttacaa ataaaactaa
     1141 gagaggtatt ctttaaaaga gcgccaggca acaatcctgc ttcaactaga atttggaatc
     1201 cattacatac accaagaatc ggcatacctt tttcagccat tttttttatg tcgcttataa
     1261 cgggactatg agctgcgatt actcctgctc gtaatcggtc accgtatgaa aaacccccag
     1321 gtaatacaat ggcatccaca tcagtaggca atgtatcagt atgccatacg agttttgatt
     1381 ccaacttaaa aacatcagtc aacacgtggt gcatatcgcg atcgcaatta ctccctggga
     1441 aaacgattac tgcaaccctc acatctttac ttacttttag gcaatattaa atcgaatcga
     1501 atgcaaaact atcatccaag atcttatacc atttattagc ccaaaaactt ttgacataag
     1561 atgttacgag ttattggacg tcctcctcct cttacgatta ttctgattgt gataaacagt
     1621 gcaatctttg catatggcat gataagtggg atgcaagaga aaattatatc acagtatggg
     1681 tttattccaa ataatctttt tcaatacgga aaccatgaat taccagacag tcttttgaga
     1741 ttatttactt cgatgtttat tcatgcaaat atagtacata tctcattcaa tctttttgcc
     1801 cttgcataca tgggcggttt tgccgaaaga tctatgggga tatcaagatt catcacaatt
     1861 tatgttgcat caggaatttg tggaggattg ctacacggtc ttgtagcatc atacatactt
     1921 ttcaatggaa atgacatatt gataggcgcg tctggagcaa tttctggaat tttaggagtc
     1981 gcggcagccc ttggagacat acgagggtat tactggttgg caatacaagt tttctatgtt
     2041 tttatcggat cattgacgtc cttgtctatt gcttttgttg cacatgttgg aggtttcatt
     2101 acaggtctat ttgtaacaaa aatcatgata cgtttagaac aagaaaaaag gaagtggtat
     2161 tagtttacta ttaattatct tgcaatcata agcaatattg attcaatttt atcagataat
     2221 taattttaat acaactttag tgaaactagc aaacttgtaa agcaaatcat ttttattcta
     2281 atactctttg gtactagcta tgggcctagt tcgcgatata atgattcgcg acgtcgttac
     2341 aatcaatcac gataaaaccg caaaggatgt agcactacta ttggcagaaa aagggatcag
     2401 ttctcttgtg gtagtaaagg atggagatcc aattgggctt gttactgaaa gagatttagc
     2461 acgaaaagta tctactacgg ataaaaaaag ttcagacatt tctcttgcag agatcatgtc
     2521 agccaatttc agatgggtag agcccatgac acctattgag gatgcagtac aaaaaatgtt
     2581 aaacaaaaac attcgtagat tgcttgttat cgacaatggc aaattagctg gtatcataac
     2641 cgagacagat ttagcaaaat acctgcgtag taagctcctc atagagggag cgttagatga
     2701 ctttaccgcc ttaaacagaa aagtagtcaa aaatggctag acggtcatag tctcaacaga
     2761 gaccttactt acaagtggat tgtatattcg aaattcatta cacagttcca taactgtctt
     2821 ttcagcaaat tccttgttct ttgcttcaat ttcaaacttc aacatttttg ctgacctaat
     2881 tttttttatt gatatttttt tgtctttcag aataagatcg tttaagatgg tatcaccctc
     2941 aggatcaact agcccgggtt tattttctat tatcacatta acaataaaag aatgcatgaa
     3001 tttcgtttaa aaccaattaa tttaagcctt gagaagtaaa gaaaaaccat gagttcgcaa
     3061 tttgatccaa ttcaatacaa aataaattcc aaagccaatt ggaatacagt tgcatttgat
     3121 tatcacaata attgggctga caaacatcat ggtccattca aatctacaag agaaatagta
     3181 agtattgcag gtctcaaccc ccatgataaa gtattagatc ttgcatgtgg gacaggagct
     3241 gtatcaaagg aaataataca acatctgcaa atggatggtt atctaattgg tgttgatttg
     3301 tcaagaactg cactttctat tgcaaaaaaa tcaattcaca actcaaatgt tgaatttctt
     3361 gaaatggatg cagaacattt ctcatttaac atactttttg acaagatttt atgccaatat
     3421 ggtttaatgt tcttcccaaa tgttgaaaaa gttctaagat cagttaaaac aattttaaaa
     3481 aaagacggtg tttttgtagt tgcggtacat ggaacgcctg aagatgttcc gtattttagt
     3541 tgcataatga atccgatttt aaaatttatt ccagacataa gacctgaagg aaccccaaca
     3601 gtgcacagat ttggaaatcc tgataagttg aataacgagt tgacaaaagc aggcttttac
     3661 aatatttcta taaagaaatt taattttagt tatgaagttg agacgtttga agaatattgg
     3721 caagactaca tgcattcgac agcaaattcc ataagaccaa aaattgaaag ttacggagac
     3781 aaggcggtta cacagataaa gatggaagcg aaacaaaatg tatccagata tgagaaggat
     3841 ggaagaataa tttttccatg gttagtgctt attgcttctg caataaaata atcacatgac
     3901 ccgtaattta catagaaatt attttatcct cacagcaaat gtagagtaat cagaatcata
     3961 ccagaatgtt tttgcttctt ttcctctact tgtaaaagag ttaaacgcaa catgggagaa
     4021 attttttttc tcaatggcgc cgtgccagtg aagtacgtgc tttggtatat atgccatatc
     4081 gccttctttt aagagaaatc tagttattgg tttaattttg atcttctttc ttgttatact
     4141 acttttgtat aagacaagta ttcctttacc ttgtgtgaca aataatatct gccctccctc
     4201 gtggtagtgt actttggttc ttgcaccatt tctaaatcca gcaaaataga ctttctgatc
     4261 cttaacatca ataattcttg aaatgtcatg taataggact ttgcctacaa agtaatttct
     4321 tttttcagat accaaggcag cgtctggttt tattgatcca atattctctt ttttcatttt
     4381 tgtttgtaga catagatcat aattagttct tttgggtcaa tttacaatgc aaattttcat
     4441 gatacgccta attgtcttgt tgcaaaccat gttttttaaa ttataaaact ctagatggtt
     4501 tcttcaatct aatgtaataa cattttaaac caccctctaa atcccattac ctaatgccaa
     4561 tgtagctcag cctggctaga gcat
//
LOCUS       DASPUS010000208         2351 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1205468, whole genome shotgun sequence.
ACCESSION   DASPUS010000208 DASPUS010000000
VERSION     DASPUS010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2351)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1205468"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            26..1291
                     /locus_tag="VEJ68_04885"
     CDS             26..1291
                     /locus_tag="VEJ68_04885"
                     /inference="COORDINATES: protein motif:HMM:NF024241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HXX06140.1"
                     /translation="MEIQSKRWIWYVPPSNLTAQGLSTVIPLYVIFLGGGIGEVAIIV
                     AIQNGALTVGSIFWGKIIDRFHIRRQILLISFLVVILCSLWMYFTTSIVMLYGIAPIL
                     GFFIVARNPITQLLVMESVKKNLWSWLFARTSVISTLGMLAAMAIGAIGSLYFDVRPY
                     FLICAVSSGVAMILCTAVKGGSFHLERGSIAHSIHGLTYAISHHHFVFPKIPELYDFK
                     HIIAIFRGKISNEIGIFYLGVFVFNLGSNIYFTGWTPFLVHHHFSNSAVFLNYSVQTA
                     TMLLVFFVAPRIISVLGEERATIIAFIPRVLAVVIPVVSIPLMVGSVGSIIAVISSCL
                     MVVGFSIFSTSSSVIFFKSIPQGFEGKYLGVNSAVTGISIFSGSLVTGEITKSFGYAV
                     LFLTASAILVCSLVLFQIYFRSRLSNKIV"
     gene            complement(1288..1920)
                     /locus_tag="VEJ68_04890"
     CDS             complement(1288..1920)
                     /locus_tag="VEJ68_04890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06141.1"
                     /translation="MTNFANNWQRPQTPSIGERINDTLKPKGALKPRMEQAIKRLQTQ
                     ISKMDGMITKLKQRDEKLFKRIVIATQQHDTTASKVLSKELAEVRKVTKLLGNARIAL
                     EQIELRLSTFHDLGDTVVTIMPTIGLMRNLRSSLIRFMPEADHELSGMTEMLGGLMTD
                     TFHNGDFGIDSEASSEESEKILQEAAAVAEAAVNDKLPSMPAGQASTRYI"
BASE COUNT          626 a          411 c          477 g          837 t
ORIGIN      
        1 ctctcttccg tgattatcta aaagaatgga aatccaatca aaaagatgga tctggtatgt
       61 acctccatct aacctaacag cacaaggatt aagcacggta attcctctgt atgtaatctt
      121 tcttggagga ggtatcggag aagttgcaat aattgtagct attcaaaatg gagcgctaac
      181 cgttggttcg atcttttggg gaaagataat tgacagattc catatcagaa gacaaattct
      241 acttatttca ttcttagtag ttattctttg cagtctttgg atgtatttta caacttcaat
      301 agtgatgctt tatggaatag caccaatact tggatttttc atagttgcaa gaaatccaat
      361 aacacagctt cttgtgatgg aatcagttaa gaaaaatctc tggagttggc tttttgcaag
      421 aacatctgtc ataagcactc ttggcatgct agctgccatg gcaatcgggg ctattggaag
      481 tctgtatttt gacgtaagac catattttct gatttgtgca gtatcgagtg gagtggcaat
      541 gatactttgt actgcagtaa aaggtgggag tttccatttg gaacgaggta gtatagccca
      601 ttcaatccat ggtctaactt atgctattag tcatcatcat tttgtatttc ctaaaattcc
      661 tgagctctat gatttcaagc atattattgc aatatttagg ggaaagataa gtaatgaaat
      721 aggaattttc tatcttggcg tttttgtgtt taatttaggc agtaacatat actttactgg
      781 ctggacacca tttcttgtcc atcaccactt ttccaactct gctgtctttt tgaattattc
      841 agtccagact gcaactatgc tgcttgtctt ttttgtggca ccaaggataa tatcagtact
      901 tggggaagag cgggctacta ttattgcatt tatacccagg gttcttgcag tagtaattcc
      961 ggtggtttca attcctttaa tggtaggaag tgtgggttct atcatagcag tcatttcgtc
     1021 atgtctaatg gtcgttggct tttctatttt tagtacctct agttccgtga tttttttcaa
     1081 aagcattcca cagggatttg aaggaaagta tttgggggta aacagtgcag taactggaat
     1141 tagtattttt agcgggtctt tagtaacagg agagattacc aagtcatttg gttacgcagt
     1201 attatttctt acagcttctg ctatacttgt ttgttcactt gttttattcc agatatattt
     1261 ccgctccaga ctatcaaata agatagtcta gatgtagcga gtagatgctt gaccggcagg
     1321 catcgatggc aacttgtcgt tgactgctgc ctctgcaacc gctgcagcct cttgtaggat
     1381 cttttcagat tcttctgacg aagcttcgga gtctattcca aagtcaccgt tgtggaaggt
     1441 gtcagtcatc aaaccaccta gcatctctgt cattccagat agttcatgat cggcttctgg
     1501 catgaatctt atcagcgaag atcttaggtt tctcatcagg ccaattgttg gcatgattgt
     1561 gactacggtg tcacctagat catggaaggt actaagtcta agctcgattt gttcaagcgc
     1621 gatcctagcg ttgccgagta gtttggtaac ttttcgaacc tcagctagtt cttttgataa
     1681 aactttactt gcggtagtat catgttgttg tgtagcgata acaattcttt taaataattt
     1741 ttcatccctt tgttttaatt ttgtaatcat tccatccatt tttgatattt gtgtctgaag
     1801 tcttttgatt gcttgttcca ttctaggctt cagtgcacct tttggtttta gcgtatcatt
     1861 tattctctca ccaatgcttg gtgtctgtgg cctttgccaa ttattagcga agtttgtcat
     1921 ggatacgact aataaaattc gtttttaatt tcaggtgtta aatgtggttc acaggatact
     1981 aaatttagct gacaaaaatg tgatcctgaa agaaaataga tttcgctttc tgccaggttt
     2041 tattaaaaaa tcaaaatttc gtggataaac tattttggat agttcctacg tttccttccc
     2101 gctgcaaaga cctactgcgt tatttgatac gcaatgtttc tttgcggatg gattttcttt
     2161 aggtgaaccg acaacgcggc acttgacggt tgtgattcac aacaaagtgg acatttttcc
     2221 attttatttg atgcatgtcg atcatagtaa atgtatttaa ggttttgctt agagtcgttt
     2281 tgacaacaaa aagtttagaa aaaattttgg aaagaattat tgataagacg agaatgtttt
     2341 tgaaaaagaa a
//
LOCUS       DASPUS010000209         2300 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1884824, whole genome shotgun sequence.
ACCESSION   DASPUS010000209 DASPUS010000000
VERSION     DASPUS010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2300)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2300
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1884824"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1473
                     /locus_tag="VEJ68_04895"
     CDS             <1..1473
                     /locus_tag="VEJ68_04895"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HXX06142.1"
                     /translation="ENSKTISSGEEKESTSDALKAESKIQSFWRIMTPDGKMHDIDKF
                     NFTKHENLEVLSKYESAKKRSVDEPPPHVKLMKKLAIADYEPASDAGNMRFFPNGRLM
                     KSLIERYVTDKVVEYGGFEVETPIMYDSHHPSMESYFHRFPARQYNVNSEGKQLFLRF
                     AACFGQFLMAKDFQMSYKNMPLRLYELTRYSFRREQSGELVGLRRLRAFTMPDCHAMC
                     TDMNQAKEEFRKRFDLSRNVIRGLGLTESDFEMAIRFTEEFYNENKALIEELVAKIGK
                     PVLVEMWKERFFYFVLKWEFNYVDNLGKASALSTDQIDVENGKRYNIEFIDEHNKPQN
                     PIILHNSPSGAIERVIYVLLEKAAKDQREGRKPSFPLWLAPTQVRIIPIKPEFLQYCE
                     QLADKISENDIRADVNDRNESVGKSIRDAETDWIRYIIVIGDKEVNATTLSIRDRKVG
                     TVRDLSINELIKDIKEETKGMPFLRLNMSRALSKRPQIMV"
     gene            complement(1485..>2300)
                     /gene="speB"
                     /locus_tag="VEJ68_04900"
     CDS             complement(1485..>2300)
                     /gene="speB"
                     /locus_tag="VEJ68_04900"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016939399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HXX06143.1"
                     /translation="EEREPSTIVFGIPFDSTHSFRPGTRFGPDAIRLAFNNMEIFSTR
                     LNIDLESVNINDIGNTKHTVVPTELIDMTSKITSDLISHNKQIIILGGEHLITYGSYL
                     SFPKDTGYVVFDAHYDLRDEYADTKMSHATYLRRIIEKRGADNIIHVGARAITKEELA
                     FKTEHKIKTITDKDIREGRGPNLIKDAISTFDKTYLSVDLDVLDPSYAPGVGNPETTG
                     ITSRELFDMIYAMNDTQIRCMDIVELCPPYDNGITASLAAKIMAEVIAMNLSH"
BASE COUNT          775 a          379 c          460 g          686 t
ORIGIN      
        1 gaaaattcga agacaatatc gtcaggagaa gagaaagagt ctacttcaga tgcattaaaa
       61 gctgaatcaa agatacaatc attttggaga attatgactc ctgatggaaa aatgcatgac
      121 attgataaat ttaattttac aaaacacgaa aacctagaag ttttatcaaa atatgaatct
      181 gcaaagaaga gatccgtaga tgagccgcct ccgcatgtga aattaatgaa gaaactcgcg
      241 attgcagact atgaaccagc ttccgatgct ggcaacatgc gatttttccc aaatggaaga
      301 ttaatgaaat cattgattga acgatatgtt actgacaaag tagtagaata cggggggttt
      361 gaggttgaaa cccccatcat gtacgattca catcatccaa gtatggagag ctactttcac
      421 aggtttcctg caagacaata taatgtaaac tcggaaggaa aacagctgtt tttacgattt
      481 gcagcgtgtt ttggccaatt tttaatggca aaagattttc agatgtcata taagaatatg
      541 ccattacgat tgtatgagtt gacacgttat agtttcagaa gggaacaatc aggtgagttg
      601 gtaggattga gaagactgag agcatttaca atgccagatt gccacgcaat gtgcactgac
      661 atgaatcaag cgaaagagga atttagaaaa aggtttgacc tctcaagaaa tgtaataaga
      721 ggattgggat tgactgaatc agattttgag atggccatta gatttacaga agagttctat
      781 aatgaaaaca aggcactgat agaagaactt gtagcaaaaa taggcaaacc tgtacttgtt
      841 gaaatgtgga aagagcgatt cttctacttt gtgcttaaat gggagtttaa ctacgttgac
      901 aatcttggaa aggcctcagc cttgtccacc gatcaaatcg atgttgaaaa tggtaaaaga
      961 tacaatattg agtttataga tgaacataac aagcctcaaa atcccataat tttacacaac
     1021 tcgccaagcg gagccattga aagagtgatt tatgtgttat tagaaaaggc agcaaaggat
     1081 caaagagaag ggaggaagcc atcatttcct ctatggcttg caccaaccca agtgcgaata
     1141 attccaatca aaccagagtt tcttcaatat tgtgaacaac ttgcagacaa gatttctgaa
     1201 aatgatattc gtgctgatgt taatgaccga aatgaaagtg ttggtaaaag tattcgtgat
     1261 gctgaaactg attggataag atacataatt gtaataggcg acaaggaagt aaatgctaca
     1321 accttaagca taagagatag aaaggttggt actgtgcgag atctttccat aaatgaacta
     1381 ataaaagaca ttaaagaaga aacaaaaggc atgccatttt tgaggttaaa catgagtcgt
     1441 gccctgtcta aaagaccgca gataatggtc taaattttga ttatttagtg tgaaaggttc
     1501 atagcaatga cttcagccat aatcttggct gcaagcgatg ctgtaattcc gttgtcataa
     1561 ggtggacata gctctactat atccatacaa cgaatttgcg tatcattcat ggcatatatc
     1621 atgtcaaata actcgcgtga ggtaataccg gttgtttctg gatttcctac acccggagca
     1681 taagatgggt ctaaaacatc caaatcaaca cttagatagg ttttatcaaa ggttgaaatt
     1741 gcatctttga tgaggtttgg tcctctacct tctcgaatgt ccttatctgt tatggttttg
     1801 atcttgtgtt ctgttttaaa ggcaagctct tcttttgtaa ttgcacgtgc tccaacatga
     1861 atgatattat cagctccacg tttttctata attcgacgta aataagtagc atgactcatc
     1921 ttggtatctg catattcatc gcgcaaatca taatgagcat caaatacaac atatccagta
     1981 tcttttggaa aactcaaata gcttccatat gtgatcaagt gttctccacc caagatgata
     2041 atttgtttat tatgtgaaat taaatctgaa gttattttgc ttgtcatatc aattagttca
     2101 gttggaacta ctgtatgttt tgtattacct atatcattga tgtttactga ttccagatca
     2161 atatttaatc ttgtagaaaa aatttccata ttgttgaatg ctaatcttat tgcatctggt
     2221 ccaaatctag ttcctggtcg aaaggaatga gtggaatcaa atggaattcc aaatacaatt
     2281 gtggatggct ctctttcttc
//
LOCUS       DASPUS010000210         2175 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1207016, whole genome shotgun sequence.
ACCESSION   DASPUS010000210 DASPUS010000000
VERSION     DASPUS010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2175)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1207016"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(121..699)
                     /locus_tag="VEJ68_04905"
     CDS             complement(121..699)
                     /locus_tag="VEJ68_04905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008297857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06144.1"
                     /translation="MTVKRQPHPIKHEQTRSISYRLPEHLVNELETEAMQKEISQNVL
                     VKQILEKYVNWDRFADKIGMIPVPKDILKTLGEEMEGDAINKVIDTMIPLIKDWVMFM
                     KGTYDLKRAIESLEDYMRASGMTSDHRIEGEVHHFIIQHNLGMRWSLFTEMLLKQIFH
                     QFLPNLSMKSRTTPNTTIASIALGSEFSEHNY"
     gene            complement(756..1271)
                     /locus_tag="VEJ68_04910"
     CDS             complement(756..1271)
                     /locus_tag="VEJ68_04910"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HXX06145.1"
                     /translation="MELDMLNEPVSRFINPHMTAIASDLSIQDAAKAMAESKVDSILV
                     FEKNKIVGIVTERDILYDIVAKGLDPVKTTLKEITKSPIISIKKSAPVKEALDIMKKN
                     NIRRLVVMDKRPIGLITQKIVCGNLREKQVRLPELEMVDKTLCPYCSKDFQDNKSLNM
                     HIDKVHIANAK"
     gene            1420..>2175
                     /locus_tag="VEJ68_04915"
     CDS             1420..>2175
                     /locus_tag="VEJ68_04915"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HXX06146.1"
                     /translation="MKLRNYSLNQIIKKPIIISQKTTLLDARSILLRHRISRLIVSKD
                     DKPIGIITEKDLVKAIYTLNDIPIEKILVSEIMSKSLVSVGENATLYDCARLMLNNKI
                     SSVVIKKDGSLSGIITKTDLASVFLTQSAGPLEISKIMTKKVITVKPADSLLFVESVL
                     IKNRLSRVVVKRNRRPVGIITHRDFIPAKMPLWLRQYGDPIEVEKYRMANQPYEYKSN
                     QLSYLATFIAADIMTPNPVTVDASDDVSEASLLM"
BASE COUNT          665 a          392 c          367 g          751 t
ORIGIN      
        1 atgaccttgt ccactattca acaaatctca aatgactcag acattgttga tgttgatggg
       61 atggccttgt gctcatctta ttaaaaataa accatttttt attttcaact atttttaatt
      121 ctaataatta tgctcgctaa attctgaacc taatgcaata ctagcaattg ttgtattagg
      181 agttgtacgt gacttcatgg aaagatttgg taaaaattga tggaaaattt gttttaataa
      241 catctccgta aataatgacc agcgcattcc aagattatgt tgaattataa aatgatgtac
      301 ttcgccttca attctatggt ctgaagtcat tccggatgca cgcatataat cctcaagtga
      361 ctcgatggct cgttttagat catatgtgcc cttcatgaac attacccaat cttttatgag
      421 tggaatcata gtgtctatga ccttgtttat tgcatcgcct tccatttcct cacctaaggt
      481 cttcaaaata tcttttggaa ctggaatcat cccaatttta tctgcaaatc tgtcccaatt
      541 cacatatttt tctaaaattt gttttacaag cacattctgt gaaatctcct tttgcatagc
      601 ttctgtttct aattcattta caaggtgctc aggaagtcta tagcttatac tccttgtttg
      661 ctcatgtttg ataggatgtg gttgccgttt tacagtcatt atgagaaaat cagctgtttg
      721 gaattaataa aactatggaa cgcctattcg tgaagttatt ttgcgttagc gatgtgtacc
      781 ttatctatgt gcatgttcaa tgatttgtta tcttgaaaat cctttgaaca gtatgggcat
      841 aaagttttgt ctaccatctc tagttcaggt aaccgtacct gcttctctct caagtttccg
      901 caaacaatct tttgagtgat taatccaatt ggccttttat ccataactac taatctgcgt
      961 atgttatttt ttttcatgat atccaaggcc tctttaacgg gtgcgctttt ttttattgat
     1021 atgatggggc tttttgttat ttcttttaag gtagtcttta cgggatctag gccctttgca
     1081 acaatgtcgt ataagatatc tctttctgta acaatcccga ctatcttgtt tttttcaaat
     1141 actagaatgc tatcgacctt ggattctgcc attgcctttg cagcatcttg aatggaaaga
     1201 tcacttgcta ttgcggtcat atgcggattg ataaatctgg aaactggctc gtttagcatg
     1261 tctaattcca taaccgtgat aacttttgag tggatttaac ttaagggttg tttttcagtc
     1321 ttgataataa tattatctta aaaacataaa attcgatgct gattatcatt tctgaaaatt
     1381 tgaaaagctc tattatttaa caaaagtaag gaataccata tgaaattaag aaattatagt
     1441 ctcaatcaaa ttataaaaaa accgattata atctcacaaa aaactacatt attggatgca
     1501 aggtccatct tacttcgaca caggataagc agattaatcg tttcaaaaga cgataaaccc
     1561 attggaatta taactgaaaa agatctggtc aaagcaatct atacgttaaa cgacatacca
     1621 attgagaaaa ttcttgtatc tgaaatcatg tctaagagtt tagtatctgt aggagagaac
     1681 gcgacattat atgactgcgc aagattaatg ctaaataata agataagctc tgtagtgata
     1741 aaaaaagatg gctcgctttc tggcattatt accaaaactg atctggcatc agtatttctt
     1801 acacaatccg caggaccatt agaaatatct aaaatcatga caaaaaaggt aattaccgtt
     1861 aaacctgcag actcgttgtt atttgttgaa agcgttctta ttaaaaacag gttgtccaga
     1921 gtagttgtta agaggaatcg aagacctgtt ggaatcataa cacatcgtga ttttatccct
     1981 gcaaaaatgc ctctctggtt aaggcaatat ggtgatccca tcgaggtgga aaaatacagg
     2041 atggccaatc aaccctacga atacaagtca aatcagttaa gctatcttgc aacttttatt
     2101 gctgccgata taatgactcc aaaccctgtc actgtggatg catctgatga tgtatctgaa
     2161 gcatcccttc tgatg
//
LOCUS       DASPUS010000211         3136 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1886158, whole genome shotgun sequence.
ACCESSION   DASPUS010000211 DASPUS010000000
VERSION     DASPUS010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3136)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3136)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3136
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1886158"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1175)
                     /locus_tag="VEJ68_04920"
     CDS             complement(<1..1175)
                     /locus_tag="VEJ68_04920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010193324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HXX06147.1"
                     /translation="MSTVTKIFEETISTDHKVITEDLSKAVLKKYGVKVPGYALVNSA
                     KEATKAAKRIGFPLVMKVVSPQILHKTDVGGVKVGLQNEKDVKKAFNEMYPRLSKKKG
                     VEIKGILLEKMVPQGIELIVGLQNDPQFGPVIMVGLGGVLTEIFRDVAFRMLPITMDD
                     AKSMLAELKGAKILQGYRGSKPIDLNMLAKALVQIGKIGVDNATYFDSVDFNPIVVYP
                     KSYFVVDAKIILRKEIKKDAISKAQPNIEFMETFFTPKSIALVGASATPGKVGNSVLD
                     SLAKHDYKGKVYPINPKAEEILGLKSYPSLEAIQDTIDLVVVCVDLSVTPPVLESCAK
                     KGIHNVVIVSGGGKELGGERAAFEAEIKRLSEQHKIRIVGPNCIGMFNAANRLDCAF"
     gene            complement(1269..1967)
                     /locus_tag="VEJ68_04925"
     CDS             complement(1269..1967)
                     /locus_tag="VEJ68_04925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HXX06148.1"
                     /translation="MSEVLVIQNSRFEGLAGLEKLLQEDGFKTRIVLAKHESIPSIKP
                     RFVIILGAPESANDDLPYLKEELNLIRDSVEKEIPVLGICLGSQLIAKAFGAKVYQGK
                     KKEIGFYQDIEFDNESKSKLFNGIKSPALVFHWHGDTFDLPKDAIRLAHSKDYQNQAI
                     KIGSAVGVQFHLEVDENTIRLWLEKSKEELSSLPYINPREITMKIPQNIDAIWNNLRI
                     FYQNFKSEFNLTKV"
     gene            2019..2405
                     /locus_tag="VEJ68_04930"
     CDS             2019..2405
                     /locus_tag="VEJ68_04930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HXX06149.1"
                     /translation="MNLNESEIVEIHNFITLLNSKKNSIVVVEGKRDEEALKKLGFSG
                     SICQFHSFKGLTRFVDSMPRYKNLILLLDSDRKGSYLTKRIISQLEHRMRIDLSFRKK
                     LVAITKGKVRHIENLTLYADYESAKL"
     gene            2463..>3136
                     /locus_tag="VEJ68_04935"
     CDS             2463..>3136
                     /locus_tag="VEJ68_04935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HXX06150.1"
                     /translation="MPYSGIVKYHVKLSFDVDGLIEKADIIGAIFGQTEGLLGPEMNL
                     NELQKVSKVGRIEVTTTTTTNQTKGDALIPMSTDINTAALIAAAIESIDKVGPFQAHF
                     KLEAIEDVRTAKKKEIVDRAKQIVQKWSTKTISEGEEMLKDVSDVTSSGKLTVFGKEK
                     LACGSGVFDSPWIILVEGRADVINLLRAGFDNALAIEGARIDESIKTLCEGKNKVVAF
                     LDGDRAG"
BASE COUNT          944 a          614 c          576 g         1002 t
ORIGIN      
        1 tggaatgcac aatcaagtcg gtttgctgca ttaaacattc caatacaatt tggaccaaca
       61 atcctaatct tgtgctgctc ggatagtctc ttgatctctg cttcaaatgc agccctttct
      121 cctcctaatt cctttcctcc acctgatact atcacaacat tgtggattcc tttctttgcg
      181 caggattcaa ggactggtgg agtaactgaa agatccacac aaacgacaac caaatctatt
      241 gtgtcctgta ttgcttcaag ggatgggtaa cttttcaaac ccaagatctc ttctgctttg
      301 ggatttatcg gatatacttt gcctttgtaa tcatgttttg caagactgtc aagtaccgag
      361 tttccaacct tgcctggtgt tgctgaagca cccacaagtg caatagattt tggtgtgaag
      421 aaagtttcca tgaattctat atttggctgt gcctttgaga ttgcatcttt tttgatctct
      481 tttcttaaga ttatctttgc atcaacgaca aaatacgatt ttggataaac tacaattgga
      541 ttgaaatcga cactatcaaa gtatgtggca ttatctactc ctatctttcc aatctggaca
      601 agtgcttttg caagcatgtt caagtcaata ggtttgcttc ctcgatatcc ttgaagtatc
      661 ttggcgcctt tcaattctgc caacattgat tttgcatcat ccatggtaat tggaagcatt
      721 ctaaacgcaa catctctgaa aatctctgtt aacacaccac caagtcctac catgattact
      781 ggtccaaatt gtgggtcgtt ttgtaatcca acaattaatt cgattccttg cggaaccatc
      841 ttctcaagca agattccttt tatctcaacg ccttttttct tagagagtct agggtacatc
      901 tcattgaatg ctttctttac atccttttca ttttgtaatc ctactttaac tccaccaaca
      961 tctgtcttgt gaagaatctg tggagaaact actttcatga caagtggaaa gccaatcctc
     1021 tttgcagctt tggttgcttc ctttgcactg tttaccagag cataaccagg aactttgact
     1081 ccatattttt tcaaaactgc ctttgataga tcttcggtaa ttaccttgtg atctgtagaa
     1141 atggtctctt caaatatctt ggttactgta ctcaaaatga atacctcttt gaattatttt
     1201 cagattcaaa attttggata tacattctta gcatcatcag actttcgaac ttagtgatag
     1261 tgattatatt aaacttttgt caaattaaat tccgacttga aattttggta aaatattctt
     1321 aaattattcc aaatcgcatc aatgttttgt ggaattttca ttgtgatctc tctaggatta
     1381 atgtagggaa gagagcttaa ctcttctttt gatttctcaa gccatagtct tatggtattt
     1441 tcatcaactt caaggtgaaa ctgtactcct acagcgcttc caatctttat ggcttgattt
     1501 tgataatctt ttgaatgtgc taatctgatt gcatctttgg gcaagtcaaa tgtatccccg
     1561 tgccagtgaa ataccaaggc aggactcttg attccattaa aaagctttga ttttgactcg
     1621 ttatcaaact cgatgtcttg gtaaaaccct atctcttttt tctttccctg atagactttg
     1681 gctccaaatg cctttgcgat aagttgtgaa ccaagacata ttccaagaac aggaatctct
     1741 ttttcaacgg aatcccttat caagtttagt tcttctttta gatacggcag atcgtcattt
     1801 gcactttcag gcgctcctaa tattataaca aaccgtggct tgatggatgg gatactttca
     1861 tgttttgcaa gaacaattct tgttttgaat ccatcttctt gaagtagttt ctctaatccc
     1921 gcaagacctt caaaccttga attttgaatt actagaactt cggacattta ttagatccac
     1981 gaaaattgct taatatgttt aattctaaat aatagtgatt gaatctcaat gaatcagaga
     2041 tagtcgagat ccacaatttc attactttgc ttaactcaaa aaagaacagc attgtagtgg
     2101 tagagggaaa gcgagatgaa gaggccctca aaaaacttgg attttctgga agtatatgtc
     2161 agttccacag cttcaaaggg ttgacaagat ttgtggattc catgccacga tacaagaatc
     2221 ttatcctact cttagactct gacagaaaag gcagctactt gacaaaaaga atcatctctc
     2281 agctagaaca tcgcatgaga atagatctat cctttaggaa aaagcttgta gccataacaa
     2341 aaggcaaggt gagacacatt gagaacttga ccctgtatgc agactatgag agcgcaaaac
     2401 tataagcact tatatccgcc ttttaagaaa ctaaattgat caaaaattaa gaggataatg
     2461 atttgccata tagtggaatt gtcaagtatc acgttaagct cagcttcgac gtcgatggac
     2521 tcattgaaaa agcagatatt ataggcgcaa tttttggcca aacagaaggt ctgcttggtc
     2581 cggagatgaa cctaaatgaa cttcagaagg tctccaaagt ggggagaata gaggttacca
     2641 ctacgaccac gactaatcaa actaagggag atgctttgat cccaatgagt acagacatca
     2701 atactgcagc tcttattgct gcagcaatag agagtatcga taaagtaggt ccatttcaag
     2761 cacactttaa acttgaagca atagaggatg ttcgtactgc aaaaaagaaa gagatagtcg
     2821 acagggcaaa acaaattgtc caaaagtggt ccacaaaaac aatcagcgaa ggtgaagaga
     2881 tgttaaagga tgtatccgat gtaacctctt caggtaaact aactgtattt ggcaaagaaa
     2941 aactggcatg tggttccggt gtttttgatt caccatggat aattcttgta gagggaagag
     3001 cagatgtaat caatcttctc agagcaggtt ttgataacgc acttgcgata gagggtgcaa
     3061 gaatcgatga atcaattaaa acgctttgtg aaggaaaaaa caaagttgta gcatttcttg
     3121 atggtgacag ggcagg
//
LOCUS       DASPUS010000212         2009 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_662393, whole genome shotgun sequence.
ACCESSION   DASPUS010000212 DASPUS010000000
VERSION     DASPUS010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_662393"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..912)
                     /gene="bioB"
                     /locus_tag="VEJ68_04940"
     CDS             complement(<1..912)
                     /gene="bioB"
                     /locus_tag="VEJ68_04940"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00433.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HXX06151.1"
                     /translation="MNSEHDFISYCKSKILSGQQLSEQEAVQLVNISDESLQFLSDTA
                     NEITRELSGNLVDVESLINAKKGKCQEDCSFCSQSAFYKSGIDTYKLLPTDVIVQNAH
                     MSKESGVKSFCLVCAWRGPTEKDFEQVCEIIDEINKKVGIEVNCSLGFITKDMALRLK
                     QLKVKRYNHNLEAAKSFFAKICTTHTFDERMYTNLMIKKVGLELCCGGIIGMGETRMQ
                     RLELGLDLARLAPEECPINILVPQKGTPLQLQSRLSLTEILRTIAVFRFLMPKTILKI
                     AGGREVYLENEQEKALLGGANGIITGGY"
     gene            complement(1188..>2009)
                     /locus_tag="VEJ68_04945"
     CDS             complement(1188..>2009)
                     /locus_tag="VEJ68_04945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HXX06152.1"
                     /translation="NPSPQSYRIPRGFTYEEHQEHCLEKIEKTLSKNDNIAAFVMESG
                     AQIAGGVTIYPLGFQKEISKMCKKYDTLFVLDEIATGFGRLGHMIEYQHQESIPDIVS
                     FGKMLTGGYLPLAATLVSKKVYEAFLGSVGQMKHFFHGHTFTGNPLACATAITNLTLY
                     KKYNLISKVKKTATHISKRIDEIARLDLVGDVRHKGMLVGIELVSNKKNKTSLGPHTH
                     ISQRIFNEAKKHKLYLRTLGHIVLLMPPLAISQNEIDFLVDGTIDTIKRVTKTML"
BASE COUNT          567 a          384 c          340 g          718 t
ORIGIN      
        1 ataaccgcct gtgatgatac catttgcacc tcccagaagt gctttttctt gttcattttc
       61 gagataaacc tctctgcctc cagctatttt cagtatggtc tttggcatga gaaatctaaa
      121 cactgctatt gtgcgaagaa tctcagtcaa agaaagcctt gactgtagtt gtaaaggtgt
      181 tcctttttgt ggtacaagaa tgttaatagg gcattcttcc ggagcaagcc ttgcaaggtc
      241 aagacccaac tcaagtcttt gcatcctggt ctcacccatt ccaattattc ctccacaaca
      301 tagctcaagc cccacttttt ttatcattag attggtatac attctttcat cgaatgtgtg
      361 tgtagtacat atttttgcaa agaaactctt tgctgcttct aaattatgat tgtatcgctt
      421 aactttaagt tgctttaatc gtaacgccat gtcttttgtt atgaatccaa gtgagcagtt
      481 cacttcaatc ccgacctttt tattaatctc atcaatgatt tcacaaactt gttcaaaatc
      541 tttttctgtt ggaccacgcc aggcgcatac aagacagaaa ctttttactc cactttcttt
      601 tgacatgtgc gcattttgta caatgacgtc tgttggaagc aatttgtaag tatcaattcc
      661 acttttgtaa aatgcagact gggagcaaaa tgaacaatcc tcttggcatt ttcctttttt
      721 tgcattgatt aaagattcga catctactaa attgccagaa agttcacgtg taatttcatt
      781 tgcagtatca gataagaatt gtaatgattc atctgatatg ttgactagct gaacagcttc
      841 ttgctcactt agctgttgac ctgataagat tttgcttttg caatacgaaa taaagtcatg
      901 ttcggaattc ataattttat tttttacatt ctattaatta atattgttat aattgtaaac
      961 tatacgataa tcgttggttt actaacttcg aacatattat tactttatta cagaggacaa
     1021 aaatgtggtc ttgatttatt atatttttga ccgcatttct cgcatatttg atattcatat
     1081 gtagactcac atcgatggat ttcgtctatc tgtagaatct ttttacagtt aggacatata
     1141 cggatctgcg gcatggaatt atatcgaata tactgcgtca taataggtta aagcattgtc
     1201 tttgtaacac gttttattgt gtctattgta ccatcaacca agaaatcgat ctcgttctga
     1261 gagattgcaa gaggaggcat gagaagtaca atatgcccaa gagttcttaa gtaaagtttg
     1321 tgtttttttg cctcattgaa gattctttga gatatatgag tatgtggtcc aagagaggtt
     1381 ttattcttct tattactcac aagctcaatt ccaacaagca tgcctttgtg tctgacatca
     1441 cctaccaagt caagtcttgc aatctcatcg attctctttg aaatgtgggt ggcagttttc
     1501 ttaacctttg atatgagatt gtattttttg tatagagtaa gatttgtaat agctgtggca
     1561 catgcaagcg gatttccagt aaatgtatga ccatggaaaa agtgtttcat ttgtcccacc
     1621 gatcccaaaa atgcttcata caccttcttt gatactaggg ttgctgcaag cggcaagtat
     1681 ccaccagtta acatttttcc aaatgaaaca atatctggaa tactttcttg atgttggtat
     1741 tctatcatgt gtcccagtct gccaaaacct gtcgcaatct catctaatac aaataatgta
     1801 tcatattttt tgcacatctt ggaaatttcc ttttgaaaac ctaaaggata aattgtaacg
     1861 ccaccagcaa tttgagctcc actctccata acaaaagcgg caatgttgtc attttttgat
     1921 aatgttttct ctatcttctc aagacaatgt tcttgatgct cctcataagt aaaacctctc
     1981 ggtatcctgt aactttgagg tgaagggtt
//
LOCUS       DASPUS010000213         2453 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1612318, whole genome shotgun sequence.
ACCESSION   DASPUS010000213 DASPUS010000000
VERSION     DASPUS010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2453)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2453
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1612318"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VEJ68_04950"
     CDS             complement(<1..459)
                     /locus_tag="VEJ68_04950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HXX06153.1"
                     /translation="MDLPRGMRDIEPVESYALEYIRQKFIETSNLFGFQFMEPSPIEL
                     VSVIETKSGPTIKNEIYYFKDKGDREVALRFDFTIGLTRYAVSQKSMRLPAKLSAFGG
                     VWRYDEPQKGRYRFFHQWDIEVYSEPNIESDAEIIDFTSKFFSNLKLQNII"
     gene            557..973
                     /locus_tag="VEJ68_04955"
     CDS             557..973
                     /locus_tag="VEJ68_04955"
                     /inference="COORDINATES: protein motif:HMM:NF014058.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="archease"
                     /protein_id="HXX06154.1"
                     /translation="MTYRNLEHMTDAFIEVSGQTLEEAFEIAGIAVVDTILDVKSIQK
                     KSEKNIEVSAIDLKGLLYNWLEEIIILTITDGFAAHEFNVKITKTDRYFLTATAGGEP
                     IDFDRHHFKLEIKAPTYHLMEIKQEKPIVMRFLLDL"
     gene            1013..1393
                     /gene="trxA"
                     /locus_tag="VEJ68_04960"
     CDS             1013..1393
                     /gene="trxA"
                     /locus_tag="VEJ68_04960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013483216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HXX06155.1"
                     /translation="MIDEEIEKIMKKKISEMTAHKESEILELNDTNFDKNIIGNKPVI
                     VDFWATWCGPCQFMLPIFTRLAKKYNTIRFARVNVDDAQGVSQRYGVYAIPTFIVFKD
                     GKLVDKAIGAVGEPGLQMLAQKYA"
     gene            complement(1390..>2453)
                     /locus_tag="VEJ68_04965"
     CDS             complement(1390..>2453)
                     /locus_tag="VEJ68_04965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HXX06156.1"
                     /translation="EEVGLGTTANIILIDGHLQKSDSILLAKRDSVVVTKPKAILLPK
                     PLDEMRDPRDKFRPVNEVQAAAGIKIASPDLEGVLPGSPVYATTDESKIDEFKKLIES
                     EMKSVFVKTDKKGVILKCDTIGSLEAITNMLKQQNVTISMADIGPVTRRDVVEALAVK
                     EHDRHLGVVIAFNVKILQDAQEEADANHIRIFHDQVIYSLIDNYTQWVQEDTANEENA
                     ILQELTPICKFTFLKGYVFRKNNPAVFGIRVDVGTLRQKISIMNSDGRKIGIVHQLQD
                     SGKSVDTAKKGQEVAISIQNVTVGRQVSEEEVFYSFPPSHEARLLLKQFSHKLSPEEF
                     QILNEIISIQRKNNPVYGY"
BASE COUNT          748 a          429 c          442 g          834 t
ORIGIN      
        1 tatgatattt tgaagtttta gattagaaaa aaattttgat gtaaaatcaa ttatctctgc
       61 atcagactct atgtttggtt cactgtaaac ttctatgtcc cattggtgaa aaaatctata
      121 acgtcccttt tgtggttcgt cgtatctcca tacgccgcca aatgctgata gtttggcagg
      181 aagtctcata gatttctgtg atactgcgta tcgagtaaga cctattgtaa aatcgaagcg
      241 aagagcaact tctcgatctc ctttgtcttt aaaataataa atttcatttt taatagtggg
      301 gccactcttt gtttcaatta cagaaacaag ttcaatagga gagggttcca tgaattgaaa
      361 cccaaataag tttgaagttt cgatgaattt ctgtcgtatg tattcgagcg cataggattc
      421 tactggttct atatccctca ttccacgtgg caggtccaaa ttcaagactc attctttttc
      481 taatgcattt agactttctg attatatcaa attatatttg taataaatta atagcataga
      541 tagaccatca aaagtcatga cttaccgcaa tttagaacac atgactgatg catttatcga
      601 agttagtggt caaacattag aagaggcatt tgaaattgcc ggaattgcgg ttgttgatac
      661 aatcttagat gttaaatcta tacagaaaaa gagtgaaaaa aatatcgaag ttagtgctat
      721 tgatcttaaa ggtttacttt acaactggtt agaagagata atcatactta cgataacaga
      781 tggatttgcc gctcatgaat ttaatgtaaa gattaccaaa acagacagat atttccttac
      841 agctactgca ggcggtgaac caattgactt tgatagacat catttcaaac ttgaaattaa
      901 agcacccaca taccatctta tggagataaa acaggagaaa cctatagtga tgcgatttct
      961 tcttgatctt taggctaaat tattaaatat cgttcaattt tacctgtttc ggttgataga
     1021 cgaagaaatt gaaaagatta tgaaaaagaa gatatctgaa atgactgctc ataaagaatc
     1081 tgagattctt gaactcaatg ataccaattt tgataaaaac ataattggaa ataagccagt
     1141 catagtggat ttttgggcaa cttggtgtgg tccatgtcaa tttatgcttc ctatttttac
     1201 aagactggca aaaaagtaca atacaattag atttgcacgg gtaaatgttg acgacgctca
     1261 aggagtgtca caaagatatg gcgtatatgc tattccaaca tttattgtct tcaaggatgg
     1321 aaaactcgtt gataaggcaa taggtgcggt tggtgaacct gggcttcaga tgcttgctca
     1381 aaagtatgcc tagtatccgt aaactgggtt atttttcctt tgaattgaaa taatttcatt
     1441 tagaatttga aattcttcgg gtgacaactt gtgggagaat tgctttagta aaagcctggc
     1501 ttcatgagat ggaggaaatg aataaaaaac ttcttcttct gagacttgtc ttcctacagt
     1561 cacattctgg attgatatgg ctacctcttg tcctttttta gcagtatcaa cacttttacc
     1621 gctatcctga agctgatgta ctattcctat ttttctacca tctgaattca tgattgagat
     1681 tttttgccgt agtgttccca cgtctacacg aattccaaaa acagcaggat tgttctttct
     1741 gaaaacatat cccttcaaaa aagtgaattt gcagatgggt gttagttctt gtagtattgc
     1801 gttttcttca tttgcggtat cttcctgtac ccactgtgtg tagttgtcaa ttaagctata
     1861 gattacttga tcatgaaaaa ttcgtatgtg gttcgcatct gcctcttctt gagcatcttg
     1921 aagaattttt acattaaaag caattacaac accaagatgt ctatcatgct cctttactgc
     1981 aagggcctca actacatcac gcctggtaac gggaccaata tctgccattg atattgttac
     2041 attttgttgt tttagcatgt tagttattgc ttcaagagat ccaatggtat cacattttaa
     2101 gatcacacct tttttatcag tttttacaaa aactgatttc atttcagatt caatcaattt
     2161 tttaaattca tcaatttttg attcatctgt tgtagcataa acaggacttc ctggtaagac
     2221 accttcgaga tcaggtgagg caatctttat tccagctgca gcttggacct catttactgg
     2281 cctaaattta tctctgggat cacgcatctc atcaagtggt tttggaagta atatcgcctt
     2341 tggttttgtg actactaccg agtctctctt agcaagaagt atagaatcag acttttgaag
     2401 atggccatca attaaaatga tgttagcagt tgttcccaga ccaacttctt ctt
//
LOCUS       DASPUS010000214         2717 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1612402, whole genome shotgun sequence.
ACCESSION   DASPUS010000214 DASPUS010000000
VERSION     DASPUS010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2717)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2717)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2717
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1612402"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            67..498
                     /locus_tag="VEJ68_04970"
     CDS             67..498
                     /locus_tag="VEJ68_04970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010193493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06157.1"
                     /translation="MAIEKWVAAASFGMFCMFVAELVSISIFLKHPSYDIDPSSQMRE
                     FISISGAPALVLAGSSYLLARRYGSRLCGSLIIAGGIVTIIGMYYVNTVLVPNISPVY
                     LVSELSITPILFMGVSVPVMVVGGLLFKIKPKPKRDYFFDR"
     gene            complement(480..926)
                     /locus_tag="VEJ68_04975"
     CDS             complement(480..926)
                     /locus_tag="VEJ68_04975"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HXX06158.1"
                     /translation="MTDVIIRKLQKKDLFNGFLQSLDSLRKASELDPKKAEKIFNKIS
                     ENPNQAIYVAIKDSKIIGATTIIIEQKFIHDGGKVGHIEDVVVAKEFQGKGIGQKIVK
                     SMLEYAQEHGCYKTILDCTDELIPFYERIGFKRHSNSMRFDHLSKK"
     gene            complement(936..1637)
                     /locus_tag="VEJ68_04980"
     CDS             complement(936..1637)
                     /locus_tag="VEJ68_04980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HXX06159.1"
                     /translation="MKAVILAGGLGTRLQPYTTFLPKAMLPLGEKPLLEHLMEWIKKS
                     GIDSFVLCVSYLRKTIEDYFEDGSRFGWKIEYAVANRPLATAGQLKTAEEFIDDSFVC
                     VYGDSIFEFNLKNMIDYHTRKKSQITMGLFEYKTRLQYGFIDMDKSNRVKTWREKPEV
                     KGNINIGCYVMEPEVFKLIPSGKPYGMDDVIRNALAKKGKVSGYLIKKGFIDIGDKIS
                     YRRAYRHYLERLGQI"
     gene            complement(1686..>2717)
                     /locus_tag="VEJ68_04985"
     CDS             complement(1686..>2717)
                     /locus_tag="VEJ68_04985"
                     /inference="COORDINATES: protein motif:HMM:NF021625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HXX06160.1"
                     /translation="KHVTVPIILDPIFESTTGGKLLRDDAYSDFKKFLMPLAHIITPN
                     IPEAERIAKMQLRTIIDLKKAASKIKKLGPRNVIIKGGHMKTHVVMDLLLEDKRFYFF
                     CNKKIKKDNHGGGCVFSAALCVAIARKRSLDQAVKFAQQTSYESIKNSTKVGRGLTVV
                     TQKNVDLLENTLADTINKFTSIKTIHQFIPECQTNFVYSKPQPNSIKDIVGLAGRIVK
                     TGESVTVSGELKFGGSKHVASAVLEVTRKFPSIRSAVNIRYSDKIIQRAIAKRFHVSS
                     YNRELESYKNKKKEGKTMSWGIRTAINDAKNSPDIIYHKGDIGKEPMIIVFGKTPNQV
                     LAKLLKIIR"
BASE COUNT          733 a          496 c          454 g         1034 t
ORIGIN      
        1 gcaggtcttg ttggaatagt ataacaatca tttggtttat ttattgaaga aaaaagatgg
       61 ataattgtgg cgattgaaaa atgggtggcc gcagcaagct ttggtatgtt ctgtatgttt
      121 gttgcagaac tagtatcaat ctcaattttt ctcaaacatc catcttatga cattgatcca
      181 tcgtcacaaa tgagagaatt catatcaatc agtggtgcac ctgcattagt tttggctggt
      241 tcttcctatt tgttagctcg cagatatggt tcgcgtctct gtggttctct aataattgca
      301 ggaggaatcg tgacaattat tggaatgtat tatgttaata cagtgctagt gccaaacata
      361 tctcctgttt atcttgtttc agaactctca attactccga ttttattcat gggagtatct
      421 gttcctgtaa tggttgttgg tgggcttttg ttcaaaatta agccaaaacc aaagagagat
      481 tacttttttg atagatgatc aaatctcatc gagttagagt gtcgtttgaa tccaatcctc
      541 tcataaaagg gtattagctc atctgtgcag tcaagaattg tcttataaca tccgtgttct
      601 tgggcatatt ccaacatgga tttaacaatt ttttgaccta ttccttttcc ttgaaattct
      661 tttgcaacta cgacatcttc aatatgacca accttgccac catcgtgaat gaatttttgt
      721 tctattatga tggttgtggc cccaatgatc ttagaatctt taattgctac gtatatggct
      781 tgatttggat tctcagatat tttattaaaa atcttttctg ccttttttgg atctagttcg
      841 cttgcttttc tgagtgaatc taatgattgt aaaaacccgt tgaagagatc ttttttctga
      901 agttttcgta tgattacgtc tgtcatatta cgcaactaaa tttggccaag tctttccaaa
      961 taatgcctgt aggcacgtct gtatgaaatt ttgtcaccga tatcgataaa gccttttttg
     1021 attaaatagc cgcttacttt gcctttcttt gccaatgcat tacgtatgac atcatccatc
     1081 ccatatggtt ttccagaagg aattaacttg aatacctcag gttccataac atagcatcct
     1141 atgttgatat tgccttttac ttctggtttt tctctccacg ttttgactcg attgctctta
     1201 tccatgtcaa taaatccata ttgaagccta gttttgtatt caaacaatcc catggtaatt
     1261 tgggattttt ttctggtatg ataatctatc atgtttttta aattaaattc aaaaattgaa
     1321 tctccataga cacaaacaaa agaatcatca ataaattctt ctgcagtttt aagctgacca
     1381 gcagttgcaa gcggtctgtt tgcaacagca tattctattt tccatccaaa tctacttcca
     1441 tcttcaaaat aatcttcaat tgtttttctt agataactca cacataatac aaatgaatca
     1501 ataccgcttt tctttatcca ttccatcaag tgttcaagga gaggcttctc accaagcgga
     1561 agcattgcct ttggcagaaa ggtggtataa ggttgaagtc ttgttccaag tccgcctgct
     1621 aaaattactg ccttcacaga aaatactcta tgattccgat atttatgttg aaggatgaaa
     1681 atattctacc tgattatctt tagaagcttt gctaaaactt gatttggtgt tttaccaaag
     1741 actattatca taggttcctt tccaatgtct cctttatgat atattatgtc tggtgaattt
     1801 tttgcatcat ttattgctgt tctgattccc catgacatag tttttccttc tttctttttg
     1861 tttttgtagg attcaagttc tctgttataa gatgaaacat gaaatcgttt tgcaattgcc
     1921 ctctgaatta ttttatcact atatcgtata ttcacggcag atcttattga aggaaacttt
     1981 cttgtcacct ctaaaactgc agaagccaca tgtttagagc ctccaaattt tagctcacca
     2041 gatactgtta ccgattctcc tgttttgact attcttcctg ccagtccaac tatgtcttta
     2101 attgagttag gttgtggttt ggaataaaca aaatttgtct ggcattctgg tatgaactgg
     2161 tgtattgtct tgatgctagt gaatttattt atggtgtcag caagagtgtt ttctaataaa
     2221 tcgacatttt tctgtgttac cacggtaaga cctcttccaa cttttgttga attttttatt
     2281 gattcatatg atgtctgttg tgcaaatttt actgcttgat ctaatgatct ttttcttgct
     2341 atggcaacac agagtgcggc agaaaagaca caaccacccc catgattatc ttttttaatt
     2401 tttttattgc aaaaaaagta aaacctctta tcttcaagta gaagatccat cacaacatgt
     2461 gttttcatat gtccgccttt gattatcacg tttcttggac caagtttctt aatttttgat
     2521 gcggctttct ttagatcaat tattgttctt aattgcatct ttgctattcg ttctgcctct
     2581 ggtatattgg gggtaattat atgtgctaga ggcatcaaaa attttttaaa atctgaatac
     2641 gcgtcatctc gaagaagttt tcctcctgtt gttgattcaa aaattggatc taaaattatg
     2701 ggaactgtca catgttt
//
LOCUS       DASPUS010000215         3373 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1209601, whole genome shotgun sequence.
ACCESSION   DASPUS010000215 DASPUS010000000
VERSION     DASPUS010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3373)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3373
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1209601"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..415)
                     /locus_tag="VEJ68_04990"
     CDS             complement(56..415)
                     /locus_tag="VEJ68_04990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HXX06161.1"
                     /translation="MGRIMIADDSDAIRMVLKDILEIGKHELVAEATNGEETVNEFLK
                     TNPDLLILDMAMPKKDGLVALKEIISTRPDAKIIMITASDSQQTMMECISAGALAYIL
                     KPFNFQDVLQKITEILG"
     gene            complement(456..824)
                     /locus_tag="VEJ68_04995"
     CDS             complement(456..824)
                     /locus_tag="VEJ68_04995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06162.1"
                     /translation="MYDEFIEVARHEIQMELIALGDIITYCSNDEQIFQTSKDVVKHI
                     HKIKGLAPMMGQDDVGKIAKISETVLKYIIEHGSLIGSYKFIVESIESMKNLFSGKQN
                     IFVDDFIKRSQATFTQISSW"
     gene            891..2762
                     /locus_tag="VEJ68_05000"
     CDS             891..2762
                     /locus_tag="VEJ68_05000"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HXX06163.1"
                     /translation="MKITQKTYLLLAIIIGVSAINLILLVSISQQNLSVLHSISVASN
                     LKVIVESISGTANSIASGNETDRQTLANEIGDFDTTYAVLGTGGSFQGFSIIATPPEL
                     VKNYNDVGNAWQNYKASAEKIKVESVFDPTVRDAITYILGKNGDLISLSNAVTNDLSP
                     LDRNYNRQKEIAAEMVQIAQDMGQKTLLVSIGEGENSTESLKKDRLTFDADLKKLEGL
                     PLDNPDYAIYGITSETLPQIPRENSDSIRQLDPLWEAEQVKIMYIESNTLISKEFGMA
                     LSSLEDQRSVLLDVTTQFVDDWNKLIDSKLTQNVVIVQVLLIADIIVFIIVMLSIRRS
                     LNPLQMLTTAITRVKEGVYGEKIDYVSKDEIGELAETINSMSSTIQQKEEEAKKVDVA
                     KDEFLAMITHELKTPLVPIRGYADILLSEHLGSLNKNQKERVEVIRSSAATLLQLISD
                     LLDAQKLELGQLKIKKSLNNLKETIEKTIVYMAPQAEIDGVSLFHDVKQDIFVQYDEE
                     RIKQVFTNLIKNSLKATNKGGKIEMIVKDSPTEVIISIKDNGSGIPAEAIDKIFKRFY
                     QVDTSLTREHGGSGLGLPICKGIVEAHGGKIWVESEVGKGSTFSFTIPKGETNRTPI"
     gene            2796..>3373
                     /locus_tag="VEJ68_05005"
     CDS             2796..>3373
                     /locus_tag="VEJ68_05005"
                     /inference="COORDINATES: protein motif:HMM:NF013673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase modulator"
                     /protein_id="HXX06164.1"
                     /translation="MLQESADKAVQIALENGAQYCDVRAEVFSTKGFLLENGEIEHFS
                     SVMDSGLGIRVLANGSWGFYSISNPMSIEEVKIGILDAVKSALFYSSMKKQKVKLAET
                     PANVETVQFKVEKKPSIEEMTKIASDCDKIIREKKFIHKSSISMHHDEFSKYYVNSDG
                     AKIHQIYDDTIVSLSATAHEFGLSETVTTTEGG"
BASE COUNT         1147 a          574 c          612 g         1040 t
ORIGIN      
        1 ctatgtcagg atatacagga ctttttaatc atacctttgt aatccaaaga ttcggtcagc
       61 ctagtatttc tgtaattttc tgaagtacat cttgaaaatt aaatggtttt agaatatagg
      121 caagtgcccc agcgctaata cactccatca tggtttgctg gctatcgctt gcagtgatca
      181 tgattatctt tgcatctgga cgagttgaaa ttatttcctt aagagctaca agtccatctt
      241 tttttggcat cgccatatct aaaattaaaa gatcaggatt agtttttaaa aattcgttta
      301 ctgtttcttc tccatttgtt gcttctgcaa caagttcatg ttttccaatt tcaagtatgt
      361 cctttagaac cattcttatg gcatccgagt cgtcagctat cattattcgt cccattctct
      421 tacaatcaca acttttggta tttaagttca gtattctacc aactggatat ttgagtaaat
      481 gttgcctgag atctttttat aaaatcgtcc acaaaaatat tttgtttacc actgaataga
      541 tttttcatac tttcaataga ctcaacaatg aatttgtatg accctataag agatccatgt
      601 tctatgatgt atttcaaaac agtctctgaa atttttgcaa ttttgccaac atcatcttga
      661 cccatcatgg gggcaagtcc tttgattttg tgaatgtgct ttaccacatc ctttgatgtt
      721 tggaaaattt gttcatcgtt actacaatat gtgataatat ctcccaacgc aattagttcc
      781 atctggatct cgtgtcgtgc aacctcgatg aattcatcat acattttaac taattaccag
      841 atatctttta tacaagcttt tataggcatt atgacccgct tctaatcgca atgaagatta
      901 ctcagaagac ttacttgtta ttggcaatca taataggcgt ttctgctatt aatctaattc
      961 ttcttgtctc tatctctcaa caaaatctat ctgttctgca ttctatcagt gttgcaagta
     1021 atctcaaggt tattgttgaa agtatatctg gcactgcaaa ttctatagca agtggaaatg
     1081 aaactgatag gcaaacattg gcaaatgaaa taggtgactt tgatacaacc tatgcagttt
     1141 taggaacagg tggttcattt caaggtttta gcattattgc aacaccgcca gaacttgtga
     1201 aaaattataa tgatgtaggt aatgcatggc aaaattacaa agcatctgca gagaaaatca
     1261 aagtagaatc agtctttgat ccaacagtaa gagatgccat aacatacatt ctgggaaaaa
     1321 atggtgatct aatttcatta tcaaacgcag tgacaaatga tttgtctcca ttagatagaa
     1381 attacaatcg acagaaagaa attgctgctg aaatggtgca aattgcacaa gacatgggac
     1441 aaaaaactct ccttgtctcc ataggcgaag gagaaaattc taccgaatct ttgaaaaagg
     1501 acagattaac ttttgacgcc gatctgaaaa aactcgaagg acttccttta gacaatccag
     1561 attatgctat ttatggcata acatcggaaa cactaccaca gataccacga gagaattcag
     1621 attcgattag acaactcgat ccattgtggg aagcagaaca agtaaagata atgtacatcg
     1681 agtctaatac tcttatttct aaagaatttg gtatggcgct ttctagcttg gaagatcaaa
     1741 ggagcgtttt gttggatgta acaacacaat ttgttgacga ctggaataag ttaattgatt
     1801 caaaattgac tcaaaatgta gttattgttc aggtcttgct gattgcagat attattgtct
     1861 ttattattgt catgctatct ataagacgtt ccctaaatcc actgcaaatg ctgacaactg
     1921 caattactcg tgtaaaagaa ggagtttatg gggaaaaaat agactatgtt tcaaaagatg
     1981 aaattggtga actcgcagaa actatcaatt ctatgtcaag tacaattcag caaaaagaag
     2041 aagaggcaaa aaaagttgat gttgcaaaag acgaatttct agctatgata acccatgagt
     2101 taaagactcc tttggttcca atacgtggat atgctgatat tttgcttagt gaacatcttg
     2161 gttctctaaa caaaaaccag aaggaaagag tagaagtaat ccgttcaagt gcagccacac
     2221 tcttgcaatt aatatcagat ctacttgatg cacaaaaatt agaattggga caattaaaaa
     2281 ttaaaaaatc attgaacaac ctgaaagaaa caattgaaaa aaccatcgtc tatatggcgc
     2341 ctcaagcgga aattgacggt gtatcacttt tccatgatgt caagcaagat atttttgtgc
     2401 aatatgatga ggaaagaatc aaacaagttt tcaccaatct tatcaaaaac agtttgaagg
     2461 ctaccaataa gggtggaaag attgagatga tcgtaaaaga tagtcctaca gaagtaataa
     2521 tctcaataaa agataatggt agcggtattc ctgctgaggc aattgataaa atattcaaga
     2581 gattctacca agttgataca tctttgacaa gagagcatgg cggaagtggt ctgggccttc
     2641 caatctgtaa aggaatagtt gaggctcatg gtgggaaaat ttgggtagaa agtgaggtgg
     2701 gaaagggctc caccttttca tttaccatcc caaaagggga aaccaacaga actccgatat
     2761 aaaataaaaa tacttgttaa ccaagctcaa agatattgtt acaagagtcg gctgataaag
     2821 cagtacaaat tgcacttgaa aatggagcac aatattgtga tgtaagagca gaggttttct
     2881 ccacaaaggg atttttgctt gaaaatggcg aaattgagca tttttcttcc gttatggact
     2941 ctggattggg aattagggtc ttagcaaatg gatcttgggg attctattct atttcaaatc
     3001 ctatgtctat tgaagaagta aaaattggca tattggacgc tgtaaaatct gctttattct
     3061 attcctctat gaaaaaacaa aaagtcaaac ttgctgaaac tcctgctaat gttgaaacgg
     3121 ttcaattcaa agtggaaaaa aaaccatcaa tagaggagat gacaaaaatt gcatctgatt
     3181 gtgataaaat aattcgagag aaaaaattta ttcataaatc atcaatatcg atgcatcatg
     3241 atgaattttc caaatactat gtaaacagtg atggtgcaaa aatacaccaa atttatgatg
     3301 ataccatagt ttctttatct gctacagctc atgaatttgg attatctgaa actgtaacaa
     3361 ccacagaagg cgg
//
LOCUS       DASPUS010000216         4110 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1888398, whole genome shotgun sequence.
ACCESSION   DASPUS010000216 DASPUS010000000
VERSION     DASPUS010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4110)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4110
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1888398"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..831
                     /locus_tag="VEJ68_05010"
     CDS             <1..831
                     /locus_tag="VEJ68_05010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06165.1"
                     /translation="LKTSYGANAETATFNIFQTDPNGNCSSGNGGLNGNCNSIISQSG
                     NVQLPFMDGTYTSGGSVSYSSPSASSTTWGHYNYTVSLGQVTFTNTQRLEFQTKFVTQ
                     TYGQLGMKMIIDNTGLSDQYGQSLLQTPSPTDPFMGYYLYLANSCSGNSGYDQDGNVY
                     VYNAGPDLAWVQQGSRAIFTTSDKTSAYAGWIFFSNGFHSSASRTDSVVAQVGASTLL
                     YYSTPYTQPGLDGYQQGTRVPAGNYLLYIYLFGYDQEGHSLLSTDYIGPVRVYYTNTC
                     "
     gene            946..1443
                     /locus_tag="VEJ68_05015"
     CDS             946..1443
                     /locus_tag="VEJ68_05015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06166.1"
                     /translation="MSAEGGPSNDDNLAAAVNSMEALVDEAVQVYELDKERINVADDL
                     YNSLKVITTFLSFSVDLHPQLLNLPENVRCILTPNLDIQIIKSNFKSETRRFDQLTLD
                     ETASVLREAVPAIISMARADRESKSKKISFLREGARKLKRLPSSSQDDIILADTEVRT
                     EKVET"
     gene            1443..2003
                     /locus_tag="VEJ68_05020"
     CDS             1443..2003
                     /locus_tag="VEJ68_05020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06167.1"
                     /translation="MVYDLLQSFRSITELQKSLEKEISLLKIKSDEMSKLVGEKLRAT
                     ESANTADLQEFRQKLEGAPTDPKKKGSTKKSSTKKKDQKNNWYNFDSISVYDGIGLKG
                     ELELYFKGMEDTKSQLERLSKIKEGIDDLVNKGLKKDLGVVILLKNELPSEIVFTNTM
                     PKRNKFVYKAIFKIPKEELNEIYISP"
     gene            2160..3014
                     /locus_tag="VEJ68_05025"
     CDS             2160..3014
                     /locus_tag="VEJ68_05025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HXX06168.1"
                     /translation="MKDEEIQVTIFDSNSDSQLYEHRLSIDKLKDELSKFGLTTNQSK
                     VYIFLGKYGSKTAPEVCKALKLPRTETYHLLTTLQNKGIVSATFQHPIKFSAEPLNKA
                     IWILVNAEKERVNTLEKQEKNIVELWDNIPVFNASTQEKENKFQMLQGSNQINSKIKE
                     MISNTKKEFWVLGSERDFLKFYHSDFFEPLDKSKVDLKLLTAASEKSMYIFDDIDRTK
                     VRKMPDSVQDNLCFIAKDDEELVFFIRNSSQSDQEISAIWTDSESMVYSMKMLFQSIW
                     PKSKNIHL"
     gene            complement(3017..3754)
                     /locus_tag="VEJ68_05030"
     CDS             complement(3017..3754)
                     /locus_tag="VEJ68_05030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010189951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase domain-containing protein"
                     /protein_id="HXX06169.1"
                     /translation="MSASQAKVRTGIPGFDSIISGGFRKGRTITISGPPGSGKTTFGM
                     QFLYSGAMDFDEPGVFVTLSQSPDEIRNDFKSFGWDVQKLFDEGRMIIIDARPFKMEE
                     GFVALDESLYRGESLPFMHLTQLILSSIKRIDAKRLVIDSLTVLGMQYTNNFYVRQGL
                     QGMIHALEDQQCTSLLISEDGDSGRIPAEWYVASGVILLHHVRKEDTMERAIQVVKMR
                     GIRHSEQIFPIKLSESGLQIMHPRLVP"
     gene            3899..>4110
                     /locus_tag="VEJ68_05035"
     CDS             3899..>4110
                     /locus_tag="VEJ68_05035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HXX06170.1"
                     /translation="MTDMDAKILGIIGGGQLGMMLTEAAKEMPEYIADVIVLDPTENC
                     PAAKSGAKQIVADFKDKNAIVELSLQS"
BASE COUNT         1409 a          773 c          789 g         1139 t
ORIGIN      
        1 ttaaaaacgt catatggcgc aaatgctgag acagcaactt ttaacatatt tcagacagat
       61 cctaatggaa attgctccag tggcaacgga ggtcttaatg gaaattgtaa tagcataatt
      121 tctcaaagtg gcaatgtgca gttgccattt atggacggca cgtacactag tggcggttca
      181 gtatcctact ctagtccctc tgccagttca acaacttggg ggcattacaa ctatactgta
      241 agtctcgggc aggtaacttt tacaaataca caaaggttag aatttcaaac aaaatttgtt
      301 actcagacat atggacagtt gggaatgaaa atgataatag ataatactgg attgtcagat
      361 cagtatggtc aatcccttct tcagactcca agtccaactg atccctttat gggatactat
      421 ctttatttag caaactcttg cagtggtaat agtggctatg accaagacgg aaacgtctat
      481 gtctataatg ccggcccaga tttggcatgg gtacaacaag gcagcagagc aatatttact
      541 acatctgata agacctcagc gtatgctggt tggattttct ttagtaatgg gttccatagt
      601 tcagcatcac gaacagatag tgtagtagct caggttggag cttcgacact actatactat
      661 agtactcctt atactcagcc tggcctcgat ggatatcagc agggtacaag agtaccggct
      721 ggtaactacc ttctctacat ttacttgttc ggatatgacc aggaaggcca ctccttactt
      781 tctacagatt atatcggacc tgtgagagtt tattatacca acacttgttg acatctcaag
      841 atccgcgaat atacaccaac atcaaaacat gttaacaata atgccttgag tgtaatttaa
      901 tctgacatac atacgttctt tatataaaaa aggccatttt tctcaatgag tgcagaggga
      961 ggacctagta atgatgacaa tctggccgca gcagtaaatt ccatggaagc cttagttgat
     1021 gaggcagttc aggtatatga gcttgacaag gaacggataa atgtcgcgga tgatctttac
     1081 aattcattaa aagttataac tacatttctg tctttttcag tagatttaca tcctcaactc
     1141 ttgaatcttc ccgaaaatgt acgttgtatt ttaactccaa atttggacat tcaaatcata
     1201 aaatcaaact tcaaatcaga gactagacga tttgatcaac ttacgctgga tgaaacagct
     1261 agtgtgctca gagaagctgt ccctgcgata atcagtatgg caagagctga cagggagagc
     1321 aagagtaaga agatatcatt ccttcgtgaa ggtgcaagaa aactaaagag attgccaagc
     1381 tcaagccagg atgacatcat tctagcagat acagaagttc gtacagagaa ggtggaaaca
     1441 taatggttta tgatttatta caatcattta ggagcataac cgaactacaa aagtctcttg
     1501 aaaaagagat cagcttatta aaaatcaaat cagatgaaat gtcaaaatta gtaggagaaa
     1561 aacttcgtgc gacagaatca gccaataccg cagacctgca ggaattcaga cagaaattgg
     1621 agggagcccc aactgatcca aaaaagaagg gaagtacaaa gaaaagcagt acaaagaaga
     1681 aggatcaaaa aaacaactgg tataattttg actcaatttc cgtatatgat gggataggac
     1741 taaagggaga gttggagctt tacttcaaag gaatggaaga tacaaaatca cagttggaaa
     1801 gactttcaaa gataaaagaa ggaattgatg acttggtaaa caaagggctg aagaaagatc
     1861 taggggttgt aatcttgtta aaaaatgaac ttccctctga gattgtattt accaacacta
     1921 tgcctaagag aaacaagttt gtatataaag cgatctttaa aattccgaag gaggagttaa
     1981 atgagatata tatttcacca tgagatgaga aaaaatcaat attatttata tcaaagaaac
     2041 tctctcatga taatatttac agtgcaagga tcaattagag gacagaatcg atcaaaacta
     2101 gtagactctt ctaggatata tcatggtact cccacaatat cggatctagg tgtaaaaaca
     2161 tgaaagatga agagattcaa gtgacaatat ttgattcaaa ttcagactcg caactatacg
     2221 agcatagatt atcaatagac aaactgaaag atgagctttc aaagttcggt cttactacaa
     2281 atcaaagtaa ggtatacatc tttttaggga agtatggttc aaagactgcg ccagaagttt
     2341 gcaaagcact aaaacttccc agaactgaaa cgtaccattt gcttaccacc ctacaaaaca
     2401 agggaatagt gtctgctacc tttcagcatc caatcaagtt ttcagcagaa cccttgaaca
     2461 aggcaatttg gatacttgtc aatgcagaaa aggagcgcgt aaatacatta gaaaaacaag
     2521 aaaaaaatat cgtagagctg tgggacaata ttcccgtctt caacgcttca acccaagaaa
     2581 aagaaaataa attccagatg cttcaaggtt caaatcaaat taatagcaaa ataaaagaaa
     2641 tgatatctaa taccaagaag gagttttggg ttctaggttc tgaaagagac tttctaaagt
     2701 tttatcattc agactttttt gaaccacttg acaaatccaa ggtagatctc aagctgttaa
     2761 ctgcagcgtc ggaaaagtca atgtacatct ttgatgacat tgatagaacc aaagttagga
     2821 agatgccaga tagtgtacaa gacaatcttt gctttattgc aaaagacgat gaagaacttg
     2881 tcttttttat aagaaattct agtcagtccg accaagagat atctgccata tggacagact
     2941 ctgaatccat ggtctattcg atgaagatgc tgttccagtc catctggccc aagtcaaaaa
     3001 acatacatct gtaaagttaa ggtactaatc ttggatgcat tatctgtagt cctgattcgg
     3061 agagttttat tggaaaaatt tgctcactat gtctgattcc acgcatcttt accacttgga
     3121 ttgcccgctc cattgtgtct tcttttcgaa catggtgtaa taatatgaca cctgaagcca
     3181 cataccattc agctggtatc cttccagagt ctccatcctc tgatattaac aaagatgtac
     3241 actgttggtc ttccaaagca tgaatcatac cttgcagtcc ctgtcttacg taaaagttgt
     3301 ttgtgtactg catgccaagt accgtaagtg aatctattac caatcttttt gcatctattc
     3361 tttttatgct gctcaggata agctgtgtca aatgcatgaa tggaaggctt tctcctctgt
     3421 atagtgattc gtcaagagcg acaaagccct cttccatctt aaacggtctt gcatcaatta
     3481 ttatcattct tccctcatcg aataactttt gaacatccca cccaaaagac ttgaaatcat
     3541 ttctgatttc atcagggctc tgtgaaagtg taacaaagac tcccggctca tcaaaatcca
     3601 ttgcgccaga gtatagaaat tgcatcccaa aagttgtttt accactgcct ggagggcctg
     3661 atatagtaat tgtcctacct tttctaaaac ctccagatat aatagaatca aatcctggga
     3721 tacccgttct taccttagct tgagatgcac tcattataca aaaattcatg taaaattata
     3781 tttaaagtct agtgatattt tccaagtaac agattccaat cttggaaaac aaatgcagat
     3841 gcaccatgtc taaactacaa atcagagcat tacaatgata aatctgtaat ttaatgaaat
     3901 gacagacatg gatgcaaaaa tacttgggat aataggcgga ggacagcttg gcatgatgct
     3961 aacagaggca gcaaaagaga tgccggaata tatagcagat gtcatagtgt tagatcctac
     4021 agagaattgc cctgctgcca agtcaggagc aaaacaaatt gtggcagatt tcaaagataa
     4081 aaatgcaatc gtggaattat cgttacagtc
//
LOCUS       DASPUS010000217         3508 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_523551, whole genome shotgun sequence.
ACCESSION   DASPUS010000217 DASPUS010000000
VERSION     DASPUS010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3508)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3508
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_523551"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1331)
                     /locus_tag="VEJ68_05040"
     CDS             complement(<1..1331)
                     /locus_tag="VEJ68_05040"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HXX06171.1"
                     /translation="MLTLTDKKEWEKKQSKKIERELPFFITIVSLLAASGFGPYTIFQ
                     KMKDVGLLPTIQKESIKILKRIDMLGTDPLTALSEAKERPSSRALGEFLGGYVSAIQS
                     GGNVINYLKSKMESAFERFENLEKQSVEKIAGLVHGWLTMQIVVLAVFILMAAIGSYP
                     MSGSGDTGSSTPPYEILLFAPIMSIIFMKLVQGMTTSNIKELETKKIIKFTVPIILVG
                     TILILTHMFDNMGLNPYILGGALTAASIFPALQFKKIYTLNMDAELATPQILRDITEA
                     RKAGMGPEKCIIHACKRKDFKSFNVIANSIANKLEWGVSLNTMFNTLQNEVKNFQVLI
                     AFRILFEIITSGGGNVNTLDSLADTSEKIYDIQKNKRESLRVYVIVGYMLIIVTGFTT
                     LMTIDSFVSINQEKSLGKPVSNEASFKSLMDLVSIAVIAQAWLAGLFIGRVT"
     gene            complement(1334..2872)
                     /locus_tag="VEJ68_05045"
     CDS             complement(1334..2872)
                     /locus_tag="VEJ68_05045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system ATPase subunit"
                     /protein_id="HXX06172.1"
                     /translation="MKDKKQAKNIQENFFSSEFIDENQTRVPDGYEIVKKYSLNPPFS
                     YANILYNMEKSNYLYFVDESRLNREELELYERLYKIIEESLESPTESTNSTFEEQLNS
                     VLKENEKLFLSNSNSSMEKVKYYLRRDIGGFGIMDALMHDLNIEDISCSGSDRPLYVW
                     HRGYDSIPTNIQFTSEDKLNSFVSRIVFRAGKHVSAAFPISDLALQGNHRISVLYQKE
                     ITPKGTSFTIRKFKEDPYTVIDLIKFGTINIPMAAYLWLLIESKMSFIIIGSTGSGKT
                     TLLNAITGLAHPDYKIFSVEDVAEININHENWFTLVARTGFGLSGEGEIGLYDLIKAG
                     VRHRPDYIVVGEIRGSEAYVMFQAMATGHGGLCTMHADSLESAIKRLQQKPMDIPPAY
                     ISLMNCALVVKRVKESSGQSGRRVTTVSEITGANTSHAAFAWNPRSDYFNDDLRESVL
                     FKKISESVGKDLKEILDEHQKRIRILKWMAEHDIRDYKRVSEIIGKYYRDPQSLMTQM
                     EIEV"
     gene            complement(2925..>3508)
                     /locus_tag="VEJ68_05050"
     CDS             complement(2925..>3508)
                     /locus_tag="VEJ68_05050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06173.1"
                     /translation="ANSQSISATGTQVWVDTSKSSGWAWGAAAVRNSGDKLLSIDTIS
                     IRGTNVAFSNWYADTDPNRVTTGNFQSAMNYTGLLSAAAGSSNTGALINGSIISGYTT
                     PLDNTNCAVNGVQVPGTSTTGALVIKLASSNPELCLLQQSGPISLQPGAKTVIYFKVP
                     QNTLTSVDAGASGSVGIYAGQVGSPITVTIAAK"
BASE COUNT          979 a          696 c          611 g         1222 t
ORIGIN      
        1 gttaccctcc ctatgaaaag gccagctagc caagcttgag caataaccgc aatggaaaca
       61 agatccatca gggatttgaa actagcttca ttacttacag gtttgcccaa acttttttct
      121 tggttgatgc ttacaaaaga atctattgtc ataagtgttg tgaatcctgt aacaattatt
      181 aacatgtatc ctacgataac atagactctt aacgactctc gtttattttt ttgaatatca
      241 tagatctttt cactagtatc agcaagagaa tctagtgtgt ttacatttcc tcctccagaa
      301 gtaatgattt caaataatat tctaaatgct attagcactt gaaagttctt tacttcgttt
      361 tgtaaagtat taaacatggt attcaaggaa actccccatt ccagtttatt tgcaatagaa
      421 tttgcaataa cattaaaaga tttgaagtct tttcttttgc aggcatggat tatgcatttt
      481 tctggaccca tgccagcttt tcttgcttct gtgatatcac gaaggatttg tggcgtagca
      541 agttcagcat ccatgtttaa tgtgtaaatt ttcttaaatt gtaatgctgg aaaaattgaa
      601 gcagctgtta gtgcacctcc aagtatgtac ggatttagtc ccatattatc aaacatatgc
      661 gtaagtatca gtatggttcc aaccaatatg atgggaacag taaattttat gatctttttt
      721 gtctcaagtt ctttgatgtt cgatgtggtc ataccctgta cgagtttcat aaatataata
      781 gacattattg gagcaaataa taaaatttca tatggaggag tagaacttcc ggtatctcca
      841 gatccactca ttggatatga ccctattgct gccatcaaga taaagacagc caagacgacg
      901 atttgcattg ttagccaccc atgaacaagt ccagctattt tctctactga ttgtttctct
      961 aaattttcaa atctttcaaa tgcgctttcc atcttacttt ttagataatt gattacattt
     1021 cctccacttt gaatggctga aacgtatcct cccagaaact caccaagagc tcttgatgat
     1081 ggtctttcct ttgcctcaga tagagcagtg agagggtctg tgcctaacat gtctattcgt
     1141 tttaagattt ttatcgattc tttctggatt gtaggtaaaa gaccaacatc tttcatcttt
     1201 tgaaatattg tatatgggcc aaatccgcta gctgcaagta gagacactat tgtaataaaa
     1261 aacggcagct cgcgttctat tttttttgat tgtttcttct cccattcttt cttgtctgtt
     1321 agagttagca attttacact tcaatctcca tttgtgtcat aagtgattgt ggatctctgt
     1381 aatatttgcc aattatttct gatactctct tataatcccg tatatcatgc tccgccatcc
     1441 actttaaaat gcgaattctt ttttgatgct catcaagtat ttctttcaaa tcttttccta
     1501 cagactctga tattttctta aagagaacgc tttctctaag atcatcatta aaataatcag
     1561 acctggggtt ccaagcaaaa gccgcatgtg aggtgttagc acccgtaatc tctgaaactg
     1621 ttgtcaccct tcgcccactt tgtccagaac tttcttttac cctcttaact actaaggcac
     1681 agttcattag agaaatataa gcaggaggta tgtccattgg tttttgctgt agtcttttta
     1741 tagcagactc gagactatct gcatgcattg tgcagagtcc tccgtgtcct gtagccatgg
     1801 cttggaacat cacatatgct tcagaacctc taatttcacc tacaacgatg tagtcaggtc
     1861 tgtgtctcac acctgctttt atcaaatcat acagcccaat ctctccttcg ccacttagac
     1921 caaaacctgt tcttgcgaca agtgtgaacc agttttcatg gttgatgttt atctctgcaa
     1981 catcttctac agaaaatatt ttgtaatcag gatgcgctaa acctgtaatt gcattaagaa
     2041 gtgtagtttt accacttcca gtagaaccga ttataataaa cgacatcttg gattctatta
     2101 acagccaaag ataggcagcc attgggatgt taatagttcc aaattttata agatcaatta
     2161 ctgtatatgg atcttcttta aatttcctga ttgtaaaact tgttcctttt ggagtaatct
     2221 ccttttggta caagactgaa attctgtgat ttccttgcaa agccaaatct gaaattggaa
     2281 atgccgcact tacatgttta ccggctctga atacaatcct tgaaacaaaa gagttgagtt
     2341 tatcttcaga agtaaattga atattggtgg gtatgctatc ataacctcta tgccatacat
     2401 aaagaggcct atcagaacca ctgcaactga tatcttcaat gtttaaatca tgcatgagcg
     2461 cgtccattat accaaaaccg cctatatctc ttctaagata atattttact ttctccatac
     2521 tcgagttcga gttactaaga aataattttt cgttttcttt taataccgag tttagttgtt
     2581 cttcaaatgt tgaatttgtt gattccgttg gagattctaa gctctcttcg attattttat
     2641 acagcctttc atacaattca agttcttcgc gatttagcct agactcgtca acaaaataaa
     2701 gataatttga tttctccata ttatataaaa tatttgcata tgaaaaaggc gggtttaaag
     2761 agtatttttt aactatttca taaccatcgg gtacacgagt ttgattctca tctataaatt
     2821 cgcttgaaaa aaagttttcc tgaatatttt ttgcttgttt tttatctttc atattttttc
     2881 accatataaa taaaaagaaa agttgggggg catttttatt cgccctactt tgctgcgata
     2941 gttactgtaa ttggagaacc tacttgtcct gcatagattc caacactgcc tgatgcacct
     3001 gcgtctacac tagtcaaagt gttttgtggg actttgaagt agattactgt ttttgcacct
     3061 ggctgcaatg aaattgggcc agattgttga agcaaacaga gttctgggtt tgatgacgca
     3121 agtttgatta cgagcgcacc tgttgtgcta gtgcctggta cttgaactcc gttgactgca
     3181 cagtttgtgt tatcaagcgg ggttgtgtat cccgatatta ttgatccgtt aatcaatgcg
     3241 ccagtgtttg aagaaccagc tgctgcgcta agaagcccag tatagttcat tgcgctttgg
     3301 aagttaccag tagttactct gtttgggtct gtatcagcat accagtttga gaatgctacg
     3361 tttgtaccac gaattgagat ggtatcaatt gataacagtt tgtctccact gtttctgact
     3421 gctgctgcac cccatgccca tcctgaggac tttgaggtat ctacccacac ttgcgtacct
     3481 gtagcagata ttgactgcga gttcgcat
//
LOCUS       DASPUS010000218         3670 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1339853, whole genome shotgun sequence.
ACCESSION   DASPUS010000218 DASPUS010000000
VERSION     DASPUS010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3670)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3670
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1339853"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1154)
                     /locus_tag="VEJ68_05055"
     CDS             complement(<1..1154)
                     /locus_tag="VEJ68_05055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF87 domain-containing protein"
                     /protein_id="HXX06174.1"
                     /translation="MIIGVVIGESKPTEVTAQSSRPLSVGEYVIIDSQDGKILGLVEK
                     SIISSDALTDVHNFDEAIESKEVAELNSRDKNYKVKIGILGFLDKLQKGHVILPAVPP
                     LPGISILDATKEDLGTIFSPDGNEWIRIGTLLRNIGIEAKININKIVSRHIGILAMTG
                     MGKSNLVSLIAKHVGSLNGTLVIFDYHNDYENLDVSKINYMTAKINPRLLPADKLAEV
                     IELRESADKQQRVLRESFTDTVKQAKDFWTALEESVSVFGHTTKGYADSAGRVLDKID
                     DAKHRFSDILDPDCGDPVDLIKEGKVNVLSVAELSERQANAGLAYYLQELLQHRKESV
                     WEKKGKKSHKSDQRFLAPIFVIIEEAHVFIPKGEHTDTKYWASKVAREGR"
     gene            complement(1151..1990)
                     /locus_tag="VEJ68_05060"
     CDS             complement(1151..1990)
                     /locus_tag="VEJ68_05060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA double-strand break repair nuclease NurA"
                     /protein_id="HXX06175.1"
                     /translation="MLNTVYKDAIKIREEARSIFKGDIFEQIIQAARNNWIEYEPQKH
                     DADIIGIDSSYNSTKFQGLELWVVTAVAVKSDGTIISEMHNQGLGQPSPELETQASKM
                     EVEACTASIDKADLVAMDGSLYSQFLTRQASLGNTIVGAIKKKQNVVFISKTSSARKQ
                     FEKLGSVAGDIFYYNHATRTPGFSKIFVDKELGPGKVVSYVYARLRDSTPLIKIELLG
                     SDHTEIEIKSLLDRITKNSVSGYPYALKLAHDKCKITNADLSRLVSLYGLGNEIGSRE
                     VLS"
     gene            complement(2078..2365)
                     /locus_tag="VEJ68_05065"
     CDS             complement(2078..2365)
                     /locus_tag="VEJ68_05065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06176.1"
                     /translation="MMKNDALLQKYVFELKHKSVILSNKHRLVLSLREKLRDKKRNFT
                     EYSQILNYLQEQERKERQIEKQWYGIKKKIAELEKNSPKHQQRKQRLVVRR"
     gene            complement(2467..2853)
                     /locus_tag="VEJ68_05070"
     CDS             complement(2467..2853)
                     /locus_tag="VEJ68_05070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06177.1"
                     /translation="MQAWCKVRFSFTTTDSRYYAGGRTDPLIILSDIEKKLPLHIKKL
                     QYGKDKKTPRVYAEYSISYDDAHLPKQEVDSFTRFMAKDPYEVLLEDDIGLLRDLIKK
                     TYGVSKDENDKIEYKIISENHNLIKA"
     gene            3020..>3670
                     /locus_tag="VEJ68_05075"
     CDS             3020..>3670
                     /locus_tag="VEJ68_05075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HXX06178.1"
                     /translation="MFQNEKTWATYVENNSTDEFHNKFDQAIEQAKKDFGKNYPMIIG
                     GKEILSSDLFQVRSPADKNMILANFPLASKDDVLRAIDSAKDAFYKWSLVPYQKRVQI
                     FREVADIFAQNKFNLSAIMCFENGKNRLEAMGDMDEAVDFMRFYAEQLEVNEGFSKPT
                     QSANASEKTRSLLKPYGVWGIISPFNFPSAIAIGMTSGALITGNTAVLKPSSDSPIS"
BASE COUNT         1028 a          719 c          654 g         1269 t
ORIGIN      
        1 tttcgtccct ctcttgcaac cttggaggcc caatactttg tatcagtgtg ctcacctttt
       61 ggaatgaaga catgcgcttc ttcgattatg acaaaaattg gtgcaagaaa tctttggtcg
      121 gatttatggg attttttacc tttcttctcc cagactgatt cttttctgtg ttgtaataat
      181 tcttggaggt aatatgcaag gcctgcattt gcctgtcttt cgctaagttc tgcaacactt
      241 agcacattga cttttccctc ttttatgaga tctacaggat caccgcaatc tggatccaaa
      301 atgtctgaaa acctgtgctt tgcatcatca attttgtcca acactcttcc agcactgtct
      361 gcataacctt tggttgtatg accaaatacc gaaacactct cttctagagc agtccagaaa
      421 tcttttgctt gttttacagt atcagtaaat gattctctta gaactctttg ttgcttgtct
      481 gcactttcac gcagttctat tacttcagct aatttatcgg ctggcaacaa tcgaggattt
      541 atctttgcag tcatgtagtt aatcttggag acatctagat tttcatagtc attgtgataa
      601 tcaaaaatta ccagcgttcc attaagtgaa cctacatgct tggctatgag agataccaag
      661 ttactttttc ccattccagt cattgcaaga attcctatgt gtcttgagac aatcttgttg
      721 atgttgattt tagcctcaat tcctatattt ctaaggaggg ttccaattct aatccattca
      781 tttccatctg gggaaaaaat tgtaccaaga tcttcttttg ttgcatctaa aatggagatg
      841 ccaggcagtg gtggtactgc cgggagtata acatggcctt tctgaagctt gtcaagaaat
      901 ccaagaatcc caatctttac tttgtaattc ttgtcacgtg aattcaactc tgctacttct
      961 ttgctttcaa tggcttcatc aaaattgtga acatcagtca atgcgtcact tgagatgatg
     1021 gatttttcta ctaggccaag aatttttcca tcttgggaat caattattac atactctcca
     1081 acagaaagtg gacgcgatga ttgggcagta acttcagttg gttttgattc tcctatcact
     1141 acaccaatta tcaactcaat acctcccttg atcctatctc atttccaagt ccatataggc
     1201 taactaggcg agaaagatca gcatttgtta tcttgcactt gtcatgcgct aattttagag
     1261 catatgggta acccgaaaca ctgttttttg ttatcctgtc aagcaacgat ttaatctcaa
     1321 tctcagtatg gtcagagcca agtaattcga ttttaattaa tggtgttgaa tctcgaagcc
     1381 ttgcatatac atatgataca acttttcccg gacccaattc cttgtcgacg aatatcttac
     1441 taaaaccagg agttcttgtt gcatgattgt aatagaatat gtctcctgca acagaaccta
     1501 atttctcaaa ttgttttctt gcagaagatg tctttgatat aaaaactaca ttttgttttt
     1561 tctttatggc accaacgatt gtatttccaa gagatgcctg tcttgttaaa aactgcgaat
     1621 atagagaacc gtccattgca accaaatctg ctttgtctat ggaggcagta caggcttcga
     1681 cttccatttt gcttgcctgt gtctcaagtt caggagatgg ttgacctagg ccttggttat
     1741 gcatctcact aattatggtt ccatctgact ttaccgctac agcggtaact acccataatt
     1801 ctaggccttg gaatttggtg ctgttgtagc tactatctat tccaataata tcagcatcat
     1861 gcttttgtgg ttcatactct atccagttat ttctagcagc ttgaattatt tgttcaaata
     1921 tgtcgccctt gaagatggat cttgcctctt cacggatctt aattgcgtcc ttgtaaacgg
     1981 tattgagcat gaaaatcctt tgcgtgcaga gataaaatgt ttcttgtttg aaatagtttt
     2041 gagcttaagc taatatttta tgaaatgtca agtaagacta tcttcgtaca acaagtcttt
     2101 gtttcctttg ctgatgtttt ggactattct tttctagttc tgcgattttc ttcttgatgc
     2161 cataccattg tttttcgatt tggcgttctt ttctttcttg ttcttgtaaa tagttcagaa
     2221 tctgggaata ttctgtaaaa tttcgtttct tgtccctaag tttctcacga agtgataaca
     2281 ccaatctatg tttatttgat aatattacgg acttgtgttt aagctcaaac acatattttt
     2341 gtaatagtgc atcatttttc atcatctatt ggaattttgt ttataacatt aaacgtttgc
     2401 aacatgcttc tcgataactt gtctgcttat cttcacgtgt ccaatgtttc aggaaaaact
     2461 tgacatctaa gccttgatta aattgtgatt ttctgagatt attttgtatt caattttgtc
     2521 attctcgtct tttgacactc cgtatgtctt ttttatgagg tctcttagta gtccaatgtc
     2581 atcttcaagc aacacctcgt atgggtcttt ggccatgaat cttgtaaaag aatccacttc
     2641 ttgctttgga agatgggcat catcataact gatagaatat tctgcataca ctcttggagt
     2701 ttttttgtct ttaccatact ggagtttttt gatatgaagg ggaagttttt tttctatgtc
     2761 tgagagaatg atcaaaggat cagttcttcc accagcataa tagcgtgaat ctgttgtagt
     2821 aaaactgaat ctaaccttgc accacgcttg cacgcataca atacatgcat gatcaataaa
     2881 aagggttgta aagtccaaaa aatgatccat actgcctaac tttacatgat tagttaaccc
     2941 attttatgat taaatgttga aaagattagc agcctaacaa acaatcaaac taattatgtg
     3001 gtgtttgctt acaaggtaca tgttccaaaa tgagaaaaca tgggcaacgt acgtagaaaa
     3061 taactcgaca gatgaatttc ataataaatt tgaccaagca atagaacaag caaagaaaga
     3121 ttttggtaaa aactatccaa tgatcatagg aggcaaagaa atactttcaa gtgatctgtt
     3181 tcaggtaagg tctcctgcag acaaaaacat gatacttgca aattttcctc ttgcatccaa
     3241 ggatgatgtt cttcgtgcaa ttgactctgc aaaagatgca ttttacaaat ggtcccttgt
     3301 accataccaa aaaagagttc agatattcag ggaggttgca gatatttttg cccaaaacaa
     3361 gttcaaccta tctgcaataa tgtgctttga gaacggaaaa aatcgcttgg aagcaatggg
     3421 ggatatggat gaggcagttg attttatgcg attttatgca gagcaactag aggtaaatga
     3481 aggattctca aaacccactc agagcgctaa cgcttcagag aagacacgta gcttgctaaa
     3541 gccttatggt gtctggggaa taatttctcc gtttaatttt ccatccgcaa tagcaatagg
     3601 gatgacatct ggggccctaa taactggcaa tacggcagta ctcaaaccat caagtgattc
     3661 tccaatatct
//
LOCUS       DASPUS010000219         9678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_665264, whole genome shotgun sequence.
ACCESSION   DASPUS010000219 DASPUS010000000
VERSION     DASPUS010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 9678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9678)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9678
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_665264"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..707)
                     /locus_tag="VEJ68_05080"
     CDS             complement(<1..707)
                     /locus_tag="VEJ68_05080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar isomerase"
                     /protein_id="HXX06179.1"
                     /translation="MSTIAAYEKEIMMQLDYLQNFQPQQLLSDIKQKKSVFCGTGDSY
                     ASALLTEVFSQFRTRSHDPLDLLKNKNLVKNHDLYLISISGNTLSNINLGKLSNSIAI
                     TANKTSRLAQSCKKIILLQFENTGTQTSGSISFLASALTCISLVSRFQILKPSRIFGH
                     AKKTSKEISVRGKVYILGNLHTFPVAYFFASKLYEILGMDAHYERIEQFSHAGLFSTK
                     RGDTVIILEEKNSHNEK"
     gene            745..1566
                     /locus_tag="VEJ68_05085"
     CDS             745..1566
                     /locus_tag="VEJ68_05085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MqnA/MqnD/SBP family protein"
                     /protein_id="HXX06180.1"
                     /translation="MEITIGHTPDADDAFMFYGMLTGKVTSPDFTVTHVVEDIETLNK
                     RALNHELDVTALSAHACAYVNDYTILRSGGSFGKGYGPIVISKEKLSSDEIIRAKIAV
                     PGKLTSAFLLLQLMIGKYDYTEMKFSDIPDAVSKGEADAGLVIHETQITYDQKNLMKL
                     LDVGEWWRDSTGGLPVPLGINVMSDKFGEDTIKKFDVFFRESIVYGMSRVSEALDYSM
                     QYGRGQSKEIIERFVRMYVNDITIDMGLLGEHSIRTLFQLGLEKGFVPEFDLKFA"
     gene            1694..1993
                     /locus_tag="VEJ68_05090"
     CDS             1694..1993
                     /locus_tag="VEJ68_05090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06181.1"
                     /translation="MYSMGFDGGNQAKKALVSLAIETVLFKISKRVYDEVNFRLYENY
                     HCYIPDCYENPEYLKRVLQDLYGQSSAHLIASIKKELEEFEAQKGIDNFITVIND"
     gene            2009..2398
                     /locus_tag="VEJ68_05095"
     CDS             2009..2398
                     /locus_tag="VEJ68_05095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06182.1"
                     /translation="MNSITETCVVSVPKDEVFHFLSKIENLPKWSTKFVQKLISSNGK
                     YKAITPIGEVFLRFDVKNEAGLVDIYAGPTEQQMRPAYLRVIPFSESTTGVVFTFFQW
                     PDTDDQTWKIFCDWIKIEVANIKKYFS"
     gene            2492..2770
                     /locus_tag="VEJ68_05100"
     CDS             2492..2770
                     /locus_tag="VEJ68_05100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06183.1"
                     /translation="MDKRVFALGVAMLAIGGSVWFYFNNTIPMATPGMSQDELNAFYQ
                     AESLNMGLRDISGMVAGLGFFISLISVGLKRRQKGGVGKPITQKPAET"
     gene            complement(2767..3864)
                     /locus_tag="VEJ68_05105"
     CDS             complement(2767..3864)
                     /locus_tag="VEJ68_05105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HXX06184.1"
                     /translation="MLEKLVKESKALEKAITGEELSFEDGMELMSYDNLYMLGASADM
                     VRQKLVGDTVTFAASYYLNYTNVCAASCQMCAFYRKGDESDAYTLTPKDIEARVGKAK
                     ELGATEVHIVGGFHPELPLEYYEEMFRTIKKSHPEMNIKALTAAEIFFLSKLTKNSVK
                     EVLTRLKTAGLDTMPGGGAELFHPDIRNKIVRGKCSGQEWLDTIEQAHNMGIKSNATM
                     LFGHIEKPEHIVDHLIKLREVQKRTKGFLTFIPLKFSLENTELEKKGLVTSESPSTYD
                     LRIIAVSRLMLARDLNNISVYWVALGKKLAQVALTYGGNDMVGTAFSEEIYRAAGKGT
                     NSSILELANTIKEIGRKPAQRDTFFNVLKTF"
     gene            3956..4354
                     /locus_tag="VEJ68_05110"
     CDS             3956..4354
                     /locus_tag="VEJ68_05110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HXX06185.1"
                     /translation="MKLHHIGIVVNKIQESLGEFEKYLNFQSISLPTPVGSQKVNVCF
                     LKVGEPFLELIEPVSPDSPIAEYAVNGGGIHHLCFEVKDIHKELDTMLKKGATILVKP
                     VRGFDERLIAFIDLNMKNTKCGLIEFLETK"
     gene            complement(4355..5752)
                     /locus_tag="VEJ68_05115"
     CDS             complement(4355..5752)
                     /locus_tag="VEJ68_05115"
                     /EC_number="3.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR04296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialidase family protein"
                     /protein_id="HXX06186.1"
                     /translation="MRNFILILLCFIASVSTCSVFGDSPGFTNLVSISKPGENSTAPQ
                     LIVSGNNVYVGWIDNNYNKFDIAFAKSTDGGSSFSTPVNLGNPNTQGADNLDIAESND
                     TIYAVWQSFSSEGSVIYFSMNHDGEKSFSSPVKLNKEGSDSAFPQIAVVDTHVYVSWL
                     ERTQENVTNVVFSKSDNNGNTFSTPIVLTHHSGISGLPQISADGNNVCILWEDNSLGN
                     FDVFFAKSTDAGNTFGDFTNISNDKGESGTPRMVSAGNDIGIVWMDNALGNYDIMFSK
                     SSDGGLTFSKPLDISNSKKDAGYPELTISGNNFYVTWTNTMEGNNYDIFFAKSSDSGQ
                     TFTDPINISNNPGASGWPQIAAAGDVYVSWVDSTTGGFDIYIAKSIDNGASFETPVNI
                     SNTPNQSWYNKMTVSPNTVYMVWQETNQANFDVVFSKSTTFVPEFGAVVPVVLVIAII
                     SIVVISRRLPMRISL"
     gene            complement(5790..6179)
                     /locus_tag="VEJ68_05120"
     CDS             complement(5790..6179)
                     /locus_tag="VEJ68_05120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06187.1"
                     /translation="MSDEELFAQVSQHGKSYVLHVDDKIFNLEKISLVKSTIPVRKPT
                     TRGGVYFTDTTAYKMKAITHDLSIIELLPNLMLGPNTEFKSIEIKTVLDVNGTQKEII
                     LETHVANTMNTKDTVELNLIVDKIRLD"
     gene            6310..6510
                     /locus_tag="VEJ68_05125"
     CDS             6310..6510
                     /locus_tag="VEJ68_05125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012186124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3311 domain-containing protein"
                     /protein_id="HXX06188.1"
                     /translation="MSIKKVYIVMALLILIPSFVNLGVPIYNRDFPELFGIPFFYWFQ
                     TMWLFASAGFYIAFTYLKGKNT"
     gene            6507..7997
                     /locus_tag="VEJ68_05130"
     CDS             6507..7997
                     /locus_tag="VEJ68_05130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010923882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HXX06189.1"
                     /translation="MIGQNVIIAFVSLFILFIVLGFYGKYWRRGDLNHVHEWSLAGRK
                     LGTTLVFFLIGADLYTAYSFVAIPSGVFVKGSLYFFAIPYVMLTFGIALVTIPKLWTL
                     SREKGYITASDFIKDRFSSPTLAIMIAITGIVAELPYIALQIVGMQAVLTVMFAGSVN
                     AQTVEEISLLIAFVILAAFTYTSGLRGATLTAVFKDILIWITVIAVIVIVPISIGGFG
                     TAFKEVKPNYVTLPPSLVPAYGTLILGSALALYLYPHAINGVLSAESAQKLRRSTALL
                     PLYGVGLAILALMGILVYAVPHAMSFLSGFPESSRGILVVPSLILSTMPDWFSGIALL
                     GIFVGGLVPAAIMAMAQANLLTRNIIKELKPNLTSSSEIRITKIASTVFKFVALAFVF
                     VVPATYAISLQLLGGVLIAQILPAVFFGLYVKALKKIPLIIGLLVGIVTGIYMTESAN
                     SFGALTTSLFNTPFGALYIAVIALSLNLSISFAGSYLYKVSRKQNN"
     gene            complement(8015..8575)
                     /locus_tag="VEJ68_05135"
     CDS             complement(8015..8575)
                     /locus_tag="VEJ68_05135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008299089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TATA-box-binding protein"
                     /protein_id="HXX06190.1"
                     /translation="MPQTKPIVDIVNVVASASVDQKIDLVEITKVFPDVEYHPEQFPG
                     LVFRLKSPKTATLIFSSGKMVCTGSKSEDAAVNAVRTVVQKLRKGKIKIKNDPEITIQ
                     NIVASVSLGGKVHLERAARSLPRSMYEPEQFPGLIHRMLDPRSVVLIFASGKLVCTGT
                     KKETEVYRAVHNLHTLLEEKKLMEYE"
     gene            8862..9107
                     /locus_tag="VEJ68_05140"
     CDS             8862..9107
                     /locus_tag="VEJ68_05140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06191.1"
                     /translation="MIRIHKPRFADWCNNNLDILVIITGIIILFAADQLVNTFDLNPG
                     WQGIEFWTFLIGVVTTSVGVSALICYRVLLKEHNFFT"
     gene            9170..9541
                     /locus_tag="VEJ68_05145"
     CDS             9170..9541
                     /locus_tag="VEJ68_05145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06192.1"
                     /translation="MDFRKIFGIKKHGEQIDNISKIKQEFEKGDKTFEKELPAKYNLL
                     QEFDINNLRDLCIKTTGHELSVEYYDDPKSGRKEITPDKEDYVQFLTDELSLSEIISY
                     GLKKKIISKEIIKNSGNNLGK"
BASE COUNT         2979 a         1741 c         1824 g         3134 t
ORIGIN      
        1 aatttttcat tgtgagagtt tttttcttct agtatgatta cagtatcgcc tctttttgta
       61 gaaaagagtc ctgcatgtga gaactgttct attctctcgt aatgtgcgtc catcccaagt
      121 atctcataaa gtttggaggc aaaaaagtat gcaacaggaa aagtatgcag attacctaga
      181 atgtagacct tgccacgaac ggatatctct ttagatgtct ttttcgcatg cccaaatatc
      241 ctcgagggtt tcaagatttg aaaccgtgaa acaagcgaga tgcatgttag agcgctggct
      301 aggaagctta tgctacccga ggtctgggtt ccagtatttt caaattgtag caaaatgatt
      361 tttttacaag attgtgctag cctgctagtt ttgtttgctg ttatagcaat agaatttgac
      421 agttttccaa gatttatgtt ggaaagagta tttcctgaaa ttgaaatcag atacagatca
      481 tggtttttta caagattttt attttttaaa agatctagtg gatcatgtga ccttgttcta
      541 aattgtgaaa acacttcggt aagaagagcc gatgcatacg aatccccagt tccacaaaag
      601 actgatttct tttgttttat atcagataac agttgttgcg gttgaaagtt ttgtagataa
      661 tctaactgca tcatgatctc tttttcataa gctgcaattg tagacatgac cttgatattt
      721 ataatagaga taaaaatcaa ctttatggaa atcacaatag gccatacgcc tgatgcagat
      781 gatgcattca tgttttatgg aatgctgact gggaaggtga catcgccaga ctttactgtt
      841 acacatgttg tagaagatat tgagacattg aataagagag cgttaaacca cgagcttgat
      901 gttactgcat tatctgctca tgcttgtgca tatgtaaacg actatacaat attacgcagt
      961 ggcggaagtt tcggaaaagg atatgggccc atagtaatat caaaggagaa actttcatca
     1021 gatgaaataa tacgtgcaaa aattgcagtt cctggcaagc ttacctctgc ctttttgttg
     1081 ttacagctta tgataggtaa gtacgattat accgaaatga agttcagtga tattcctgat
     1141 gccgtatcaa aaggcgaggc agatgctgga ttagtaattc atgaaaccca gataacatat
     1201 gaccagaaga atctcatgaa attgctcgat gtgggcgaat ggtggcgtga cagtactggc
     1261 ggactacctg ttccacttgg aatcaatgtc atgagtgaca aatttggaga agatacaata
     1321 aaaaagtttg atgtgttttt ccgagaatca atagtatatg gtatgtctcg tgtaagtgag
     1381 gcattggatt attctatgca gtatggtaga ggccaatcaa aggaaatcat tgaaagattt
     1441 gttcgcatgt acgtcaatga cattacaatt gacatgggtt tgcttggcga gcattccata
     1501 cgaactctct tccagttagg attggaaaaa gggtttgttc cagagtttga cctcaaattt
     1561 gcataattct agttttacaa gacttaattc cagaaaaaga gtcattaaaa ttttagaaac
     1621 gagatatttc caattttgat aacaaaacta taacaaaata tacaagtatt ctttatcaca
     1681 tagttacgcg aatatgtact ctatgggttt tgatggtggg aatcaggcaa aaaaagcact
     1741 tgttagtttg gccatagaaa cagttttgtt caaaattagc aagcgagtct atgatgaagt
     1801 aaattttagg ctttatgaaa attaccactg ctacattcct gattgttatg agaaccctga
     1861 atatctaaaa agagttctgc aagatctata tggtcagtca tctgcccacc taatcgcatc
     1921 aataaaaaaa gagcttgaag aatttgaagc acaaaaggga atagataatt ttatcacagt
     1981 aattaatgat tagaaaacaa tcagagatat gaattccatt acagagacgt gtgttgtatc
     2041 tgttccaaaa gacgaggtct ttcacttttt atcaaagatt gaaaatctcc ccaaatggag
     2101 tacaaaattt gtccagaaat taatatcatc taatggaaaa tacaaagcaa ttacaccaat
     2161 tggcgaggtc tttttgagat ttgatgtaaa aaatgaagca gggctagttg acatttatgc
     2221 aggacctaca gaacaacaaa tgcgacctgc atacctaaga gtgataccat tttcagaaag
     2281 tactacaggt gtcgtgttta cattttttca atggcctgat actgatgatc aaacatggaa
     2341 gatattttgt gactggatta aaattgaggt tgcaaacatc aaaaaatact tttcctagaa
     2401 caccaattgc attagatctt acaaaacttt gaatctcaaa gtatgtattc taattaatgg
     2461 ttaattagga gataagacta aaattgtcat tatggacaag cgagtttttg cattgggagt
     2521 tgcaatgctt gcaataggcg gatcagtttg gttttacttt aacaatacca taccaatggc
     2581 gactccagga atgtcgcaag acgaattgaa tgccttttat caggcagagt cattgaacat
     2641 gggactacga gacatatcag gcatggtagc tggtttagga tttttcattt cgttgataag
     2701 tgtaggtttg aagcgcagac aaaagggagg tgtaggaaaa ccaattactc aaaaaccagc
     2761 agagacctag aaagttttca agacattaaa gaaagtatct cgctgggctg gttttctccc
     2821 tatttctttt atcgtatttg cgagttccaa tatggatgag tttgtaccct tgcctgcagc
     2881 acgataaatc tcctctgaga aagcagtacc aaccatgtca tttcctccat atgtaagagc
     2941 tacttgtgca agtttttttc caagtgccac ccagtagact gatatgttgt tcagatctct
     3001 tgcaagcatt agtcttgata ctgcaataat tctaagatca taagtagatg gactctcaga
     3061 ggttaccaat cctttctttt caagttcagt attttcaaga ctgaatttta gaggtataaa
     3121 agtcagaaat ccttttgtcc ttttttgaac ctctcttaat tttattagat gatcaactat
     3181 atgctctggc ttttcaatat ggccaaacaa catcgtggcg ttgctcttaa tacccatatt
     3241 atgagcttgt tctatcgtat caagccattc ttgtcctgaa catttaccac gtacaatctt
     3301 gtttctaata tcagggtgaa acagttctgc accaccccct ggcatggtat ccagacctgc
     3361 agtttttagt cttgtcaaca cttcttttac agagttttta gttagttttg acaagaaaaa
     3421 gatctcagca gcagttagtg ctttaatgtt catctcagga tggcttttct tgatagttcg
     3481 gaacatttcc tcatagtatt ccaaaggaag ttctggatga aatcctccta cgatgtgaac
     3541 ctctgttgcg cccaattctt ttgctttgcc aactcgtgct tcaatgtctt ttggagtcag
     3601 agtatacgcg tcgctttcat ccccttttct gtaaaatgcg cacatctggc aacttgcagc
     3661 acaaacgtta gtataattaa gataatagga agcagcaaaa gttacagtat cacctacaag
     3721 tttttgtctt accatatcag cagaagcgcc tagcatgtag agattatcgt atgacattag
     3781 ttccatgcca tcctcaaatg ataattcttc tcctgttatg gccttctcaa gcgccttgga
     3841 ttcttttact agtttttcca acacggctac tttagatttt gatttcaata taaaagtaag
     3901 agtcatgtcg tattcattcc gttagattat tgtatgtggt ttacagcaaa agatcgtgaa
     3961 acttcatcat attggcatag tagttaacaa gattcaagaa tccttaggag agtttgaaaa
     4021 gtatctaaac tttcaaagta ttagcttgcc tactcctgta gggagccaaa aagtcaacgt
     4081 ttgtttttta aaggttggcg agcctttttt agaactaatc gagcctgtct caccagattc
     4141 tcctattgca gaatacgcag ttaatggggg aggaattcat catttgtgtt ttgaagtcaa
     4201 ggacatacac aaagagttag acacaatgtt aaagaaaggt gcgaccatat tggtaaaacc
     4261 ggtcagaggt tttgatgaga gactgattgc atttattgat ttaaacatga aaaatacaaa
     4321 atgcggtcta attgagttcc ttgagacaaa ataactaaag gctaattctc atcggcaatc
     4381 tccgagagat tacaacaata ctaattattg caatgacaag tacaactgga acaactgctc
     4441 caaattctgg aacaaatgtg gtactttttg aaaatactac atcaaagttt gcttgatttg
     4501 tctcctgcca aaccatgtaa acagtatttg gtgaaactgt cattttgttg taccatgatt
     4561 gattcggagt gttactgatg ttaacaggag tctcaaaact tgcaccgttg tcaatgcttt
     4621 ttgctatata gatatcaaag cctccagtgg tactgtcaac ccagcttaca tacacatcgc
     4681 ctgctgctgc aatctgcggc catccagagg cgcctgggtt attgcttatg tttattggat
     4741 cagtaaaagt ttgcccacta tcactgctct ttgcaaaaaa gatatcatag ttgttaccct
     4801 ccattgtatt agtccatgtt acatagaaat tgtttccaga aattgtcaat tctggatatc
     4861 cagcatcctt cttactattg ctaatatcca acggtttgct aaatgttaaa cccccgtcgc
     4921 tactctttga aaacatgata tcatagttgc caagggcatt gtccatccaa actattccta
     4981 tatcgtttcc tgcagaaacc attctaggag tacccgactc tcccttgtca ttacttatgt
     5041 ttgtgaaatc cccaaaggtg tttcctgcat cagtgctctt tgcaaaaaag acatcaaaat
     5101 ttcctaaact gttatcttcc cataagatgc acacgttatt tccatcggca gagatttgtg
     5161 gaaggcctga gatcccggaa tgatgcgtga gtacgattgg agtactaaag gtgttaccgt
     5221 tattgtcgct tttagagaag accacatttg taacattttc ttgcgtcctt tctaaccacg
     5281 aaacgtaaac atgtgtgtca actaccgcga tttgtggaaa ggcagaatca cttccctctt
     5341 tgttaagttt gactggggaa ctaaatgatt tttctccatc atgattcatt gaaaaataga
     5401 tgacagagcc ttctgatgaa aacgattgcc agactgcata tattgtgtca tttgactctg
     5461 caatatccaa attatctgca ccttgtgtgt taggatttcc aagattgaca ggagtactaa
     5521 acgatgatcc tccatcggta ctctttgcaa atgctatatc gaatttattg taattattat
     5581 caatccagcc cacatacacg ttatttcctg agacaattag ttgtggcgct gtcgagtttt
     5641 ctccaggctt actgatactg acgagattgg taaatcctgg cgagtctcca aaaacagaac
     5701 atgtggaaac agatgcaata aagcataata gaattaagat aaaatttctc acattcaata
     5761 cttggatcta tattataaga tgtttttgat tagtctaaac gaatcttatc cacgataaga
     5821 tttagttcaa cggtatcctt tgtgttcatt gtatttgcaa catgcgtttc taaaataatt
     5881 tctttttgtg taccgtttac atccaatacc gtctttatct caatggattt gaactcggta
     5941 tttggtccaa gcatgagatt tggcaaaagt tctattatgg ataagtcatg tgtgatcgct
     6001 ttcattttgt acgcagttgt atccgtaaag taaactccgc ctctggtagt gggttttctt
     6061 actggaattg ttgattttac tagagagatt ttttctaaat tgaagatctt gtcatcaacg
     6121 tgcaacacat atgactttcc atgctgagaa acctgtgcaa ataattcttc atcactcatt
     6181 tgttattaat ctctgaacaa cctgtaataa tcttctcctt tgaaaatttt acagattttg
     6241 cgagtgtaaa attacgattg gcagaacaat tcttaagcct tatatctttt acaccaaatt
     6301 caacatgaga tgagtatcaa gaaagtgtat atcgtaatgg cacttcttat cctgatacca
     6361 tcatttgtca atcttggggt cccaatttac aatagagatt ttcctgaact ttttggaata
     6421 cctttcttct actggttcca aacaatgtgg ttatttgcat ctgctggatt ctacattgct
     6481 tttacctact tgaagggaaa gaatacatga ttgggcaaaa tgtgattatt gcatttgtat
     6541 ctcttttcat tttgtttatt gtacttggtt tttatggaaa atactggaga cgaggtgacc
     6601 tcaatcatgt tcatgaatgg tcattagctg gaagaaaact tggtacgaca ctagttttct
     6661 ttctaatagg agctgatctt tatactgcat atagctttgt cgcaattcca tcaggcgttt
     6721 ttgtaaaagg ttcgctctat ttttttgcca tcccatatgt tatgttgact tttggcattg
     6781 cactagttac aattcccaaa ctatggacgc tttcaaggga aaagggatac attaccgcat
     6841 cagattttat caaagatcgt tttagcagcc caactttagc aataatgata gcaattactg
     6901 gaattgttgc agaattgcct tacatagcat tacagatagt cggcatgcag gcggtactaa
     6961 cagtaatgtt tgcaggatct gttaatgcac aaaccgtcga ggagatttcg cttttaattg
     7021 catttgtaat cttggctgca tttacctata caagtggttt acgcggtgca acattaactg
     7081 ccgtattcaa agatatcctg atctggataa ctgtaatagc cgtaattgta attgttccaa
     7141 tctccattgg tggttttgga actgcgttca aagaagtaaa accaaattat gtcacattgc
     7201 caccttcact agtacctgct tatggcactc taatacttgg gagcgcccta gcactctatt
     7261 tgtatccaca tgcaataaac ggagtgttaa gtgcagaaag cgctcagaag cttaggagga
     7321 gcacagctct tcttcctttg tacggcgtgg gacttgcgat attggccttg atgggaattc
     7381 tagtgtatgc agttcctcat gcaatgagtt ttctttctgg ttttcccgag agctctcgag
     7441 gaatattggt tgtaccgtct ttgatactgt ctacaatgcc agattggttc tcaggtattg
     7501 cactacttgg tatttttgtt ggtggattag tgcctgcagc tataatggca atggctcaag
     7561 caaatttgct aacacgtaac ataatcaagg aactcaaacc aaaccttaca agtagttcag
     7621 aaatcagaat aacaaagatt gcatcaacag tattcaaatt tgtggcatta gcatttgttt
     7681 ttgttgtacc agcaacatat gcaatatcat tacagttatt gggcggagtt ttgatagcac
     7741 agatacttcc cgcagtattt tttggcctgt acgttaaagc gttgaagaaa ataccattaa
     7801 tcataggtct tctagtaggc atcgtaacag gcatttacat gacagagtct gcaaatagtt
     7861 ttggtgcact taccacatca cttttcaaca ctccatttgg cgcgttatat atagctgtga
     7921 tagctctatc tctgaatttg tcaatatcat ttgctggaag ctatctctat aaagtatcta
     7981 ggaaacaaaa taattaaaat cagttattca aaaactactc gtattccatt agcttctttt
     8041 cttcaagaag agtatgtaaa ttatgaactg cacgatacac ttcagtctct ttttttgtac
     8101 cagtgcaaac taatttgcct gaagcaaata ttagtacaac agagcgtggg tcaagcatcc
     8161 tatgaatcag tccaggaaat tgttcaggtt catacatgct tcgcggcagg cttcgtgcgg
     8221 cgcgttccaa atgaacttta cctcctagac ttacagaagc aacaatattt tgaattgtta
     8281 tctctggatc attttttatc tttatcttac cttttcgaag cttttgtacc acagttcgta
     8341 cagcattaac tgctgcatct tctgacttgg aaccagtaca aaccatttta ccagaactaa
     8401 agatcagtgt tgcagttttt ggagatttta atctaaaaac caatccggga aactgttctg
     8461 ggtgatattc aacgtctgga aacaccttgg ttatctcgac aagatcaatt ttttgatcaa
     8521 cggaggcaga tgcgacaacg tttactatat ccacaattgg ttttgtttgc ggcacggtta
     8581 ggggtacaat ttactactat aaatactaaa tatacgtcat tcccgtaggg tcaagatcgc
     8641 ctgtctctct cctaaaaaga tgcataatga gtatgagttt aagagataaa atttactcac
     8701 aaattgtaag tgaaggttat caatgatctt ctaccttact ataccatgac agttctatac
     8761 ttaccgatag ttgatgaaca agacgaagag tattctacaa tttcctatga agcaatacaa
     8821 aacatattca tggtttgggg ttagggagat gaaatttcaa gatgataagg attcacaaac
     8881 cacgattcgc tgattggtgc aacaataacc tagacatatt ggtaattatt acaggaatta
     8941 taattttatt tgctgcagat caattagtaa atacatttga tcttaatccc ggatggcaag
     9001 gaattgaatt ttggacattt ttgattggag ttgtcacaac atcagtagga gtttcggctc
     9061 ttatctgtta tagagtattg ttaaaagagc ataacttttt cacatgaggt agggtcatca
     9121 cgagtgaatc atatcgttta aatatatttc ttcaaagaaa acaagactaa tggattttag
     9181 aaagattttt ggtataaaaa aacatggtga acagatagat aacatttcta aaataaaaca
     9241 agaatttgaa aaaggtgaca agacatttga aaaagaacta cctgcaaagt ataatctttt
     9301 acaggaattt gatataaata atctcagaga tctgtgtatt aaaacaacag gtcatgaact
     9361 atctgttgaa tattatgatg atcccaaatc tggaagaaaa gaaataacac ctgacaagga
     9421 agactacgta caatttctta cagatgagtt gtcattatcc gaaataatca gttatggttt
     9481 aaaaaagaag attatttcca aagagattat aaaaaattcg ggcaataacc taggaaaata
     9541 gtcatccctt tggaataatc agatttagaa atattgtttt taccacaaga ccatctgaaa
     9601 caccaatgcc cagagtataa tttcctggca aagcagaata atttcgaagc actagttgag
     9661 atttatgctc tgatgaaa
//
LOCUS       DASPUS010000220         3022 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1615812, whole genome shotgun sequence.
ACCESSION   DASPUS010000220 DASPUS010000000
VERSION     DASPUS010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3022)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3022
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1615812"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..600
                     /locus_tag="VEJ68_05150"
     CDS             <1..600
                     /locus_tag="VEJ68_05150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008298975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043743 - LPPG:FO 2-phospho-L-lactate
                     transferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-phospho-L-lactate transferase CofD family
                     protein"
                     /protein_id="HXX06193.1"
                     /translation="LSDITEWMCQKFAVDTKIIPVTDNSVETRIVTNKGELHLQEYWV
                     KYKGEDKVDGIKYIGADKARANPAAVNAIHDSKLVVIAPGNPLTSIGPILSIKGIRKE
                     LAKSKKKVVVVSPIIGNAAVSGPATKYLEAAGIEVSVYGLAKMYSEVASHIVIDTADR
                     LHTRKIENLDMKVYETKIRMKDKKDEEALGSFILKQVHV"
     gene            593..1231
                     /gene="cofC"
                     /locus_tag="VEJ68_05155"
     CDS             593..1231
                     /gene="cofC"
                     /locus_tag="VEJ68_05155"
                     /EC_number="2.7.7.68"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010195078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043814 - phospholactate
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-phospho-L-lactate guanylyltransferase"
                     /protein_id="HXX06194.1"
                     /translation="MSKLRIGAIIPVKTFSRAKTRLNLSPEKTEQLCKIMLESVLETV
                     SKSEMIEKTILVSKDEVALSIGKRFGVIDIYDQEELGVNSAVMLADKYLLKENFDASI
                     VFPQDIPLIQTEDIKTLIEYRMSNRCVLVIPSRKFDGTNALFRMPIDVMETHYDEDSY
                     KIHLNTAEKRNVPSSLVLIRRIMLDIDEQSDLDLIMTQNLPVVRSLRSVMNS"
     gene            complement(1261..2256)
                     /locus_tag="VEJ68_05160"
     CDS             complement(1261..2256)
                     /locus_tag="VEJ68_05160"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HXX06195.1"
                     /translation="MQIEKITQILSFPHSVFISVILGIMILSFPIGAYVVFNSDIGNE
                     INFQYPLNGFNFFVAGIGYKIPASFEIGNCFILVWSIYLILFAIALIGPKSNVMKTLG
                     HMLPEGWKNSRENYIIDVITWFTILILISLTIDLIQSGFGVKIESPTSQNNLINFFQL
                     TLSPLTEEFGFRVILIGIPLFLLFAQNVTWRTFFKSLWRPSAYLQITNSKKVLALIIA
                     VGIFFGVAHIISGNPWSTGKFTQAAIAGSIIGWVYVRYGLAPAILIHWATNFFITSYS
                     YFMSNLSQIPISRDFSDPFSNMLEILLIVTGIISLTIKILNYIESRKKSTPVTQI"
     gene            complement(2267..2575)
                     /gene="yciH"
                     /locus_tag="VEJ68_05165"
     CDS             complement(2267..2575)
                     /gene="yciH"
                     /locus_tag="VEJ68_05165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response translation initiation inhibitor
                     YciH"
                     /protein_id="HXX06196.1"
                     /translation="MAVICNTCGLPNDLCACGELEKDQTQIVVRIEERRFKKKGTMIE
                     GINPKMNDLGKVVRELKARYACGGTVKEGYIFLQGDHRDTIKGTLVKLGFPESSIEVH
                     "
     gene            2655..2993
                     /locus_tag="VEJ68_05170"
     CDS             2655..2993
                     /locus_tag="VEJ68_05170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sjogren's syndrome/scleroderma autoantigen 1
                     family protein"
                     /protein_id="HXX06197.1"
                     /translation="MSKDLTKKAVEMLLNGATLVSDPCPYCKGVRIIKEGNAFCVNCG
                     REANEKKVLEVEHKLKDDKNAHSPVDRLDKKLKDLTNELYHEKNHEKQQQIIRSINEI
                     ISIKERLKTL"
BASE COUNT         1075 a          485 c          556 g          906 t
ORIGIN      
        1 ctctcggata ttacggaatg gatgtgtcaa aaatttgcgg tggatacgaa aataattcct
       61 gttacagaca atagcgtaga gacaagaatt gttacaaaca aaggtgaact ccatctgcaa
      121 gaatactggg taaaatacaa aggtgaagac aaagtagacg gcataaaata cattggcgca
      181 gataaggcac gtgctaatcc ggctgctgtc aacgccattc atgattcaaa gttagtagtt
      241 attgctccag gaaatcccct gacaagcata ggtccaatat tgtcaattaa aggaattaga
      301 aaggagttgg caaaatcgaa gaaaaaggtg gtagttgtaa gtcctatcat aggaaatgct
      361 gcagtgagtg gacctgccac aaaatatttg gaggctgcgg gaattgaagt ctccgtgtat
      421 ggacttgcaa agatgtattc tgaagtagct tcacatattg taattgatac tgctgataga
      481 cttcataccc gaaagattga aaatttggat atgaaagtat atgaaacaaa gatacgaatg
      541 aaagacaaaa aagatgaaga agcactcggt tcatttattc taaaacaagt tcatgtctaa
      601 gttaagaata ggtgcaataa tacctgtcaa aacattttca agagcaaaga cgcgtcttaa
      661 tctatcacca gaaaaaacag aacagctatg taaaattatg ttggaatcag tattggaaac
      721 tgtttcaaaa tctgagatga tagaaaaaac aattctagta agtaaagatg aggtagcgct
      781 cagcataggt aaaagatttg gcgtgataga tatctatgac caagaagagc ttggagtgaa
      841 tagtgctgtc atgcttgctg acaaatatct cttaaaagag aattttgatg caagtatagt
      901 ctttcctcaa gacattcctc tgattcaaac agaggacatt aaaactctga tagaatatag
      961 aatgtcaaat agatgtgtac ttgtaatacc ttcacgaaag tttgatggaa caaatgcgtt
     1021 atttcgaatg cctatagatg tcatggaaac tcattatgat gaggatagct acaaaatcca
     1081 tctaaacacg gcagaaaaaa gaaatgtgcc gtcttctctt gttctaatta ggagaattat
     1141 gctagatatt gatgaacaat cagacttgga tctcataatg acacaaaact taccggttgt
     1201 taggtcatta agatctgtaa tgaattcata atctgttctg tttattgtta tttgtaatac
     1261 tcagatttgt gttaccggtg tagatttttt tcttgattcg atataattta aaattttaat
     1321 tgttaaggaa attatgccag taacaatgag taatatctcc agcatgttag aaaatggatc
     1381 tgaaaaatct ctggaaattg gtatttgact caaattcgac ataaaatatg aatatgaagt
     1441 aatgaaaaag ttagtagccc aatggatgag aattgctggt gcaagaccat atctaacata
     1501 aacccaaccg atgattgaac ccgcaatcgc agcttgtgtg aatttacctg tactccaagg
     1561 gttgccagaa attatgtgtg ctacaccaaa aaatatgcct acggcaatta tcaaagctaa
     1621 aactttttta ctgtttgtaa tttgtaaata agcagaaggt ctccataggg atttgaaaaa
     1681 tgttctccaa gtgacatttt gtgcaaaaag aaggaatagt ggtattccta tgagtataac
     1741 tctaaatcca aattcctccg ttaaaggaga aagagtaagt tgaaaaaaat taattaagtt
     1801 attctgcgat gtcggagatt caattttaac accaaaaccg ctctgaatta aatcaattgt
     1861 taaggaaatt aaaattaaaa ttgtaaacca tgttattaca tcaataatgt aattctctct
     1921 gctgtttttc caaccttcag gtaacatgtg tcctaatgtt ttcattacat tgctttttgg
     1981 acctatgagt gctattgcga ataaaatcaa gtatattgac caaacaagta tgaaacaatt
     2041 tccaatttca aatgaagccg gtatcttgta accaatgcct gcaacaaaga aattaaaacc
     2101 atttagtgga tattgaaaat ttatttcatt tcctatgtct gaattgaaga caacatatgc
     2161 accaatggga aaggaaagaa tcatgatgcc aagtatgact gatatgaaaa cagaatgtgg
     2221 gaaggaaaga atctgtgtta ttttttcgat ttgcaacaag gtgattttaa tgaacttcta
     2281 tgcttgattc gggaaatcca agttttacta atgttccttt tattgtatct ctatgatctc
     2341 cttgcagaaa gatgtatcct tcttttactg ttccaccaca agcatatctt gcttttagtt
     2401 ctcttacgac ttttcccaag tcattcattt ttggattgat cccttcaatc attgtacctt
     2461 tctttttaaa acgtcgctct tctattctga ccacaatttg tgtttgatct ttctcaagtt
     2521 cgccacaggc acataaatca ttgggaagtc cgcaagtatt gcagattacc gccattcaaa
     2581 ttaaaaagtt gatttcctac tattaagcct tgttcatccg tatctttttt actttgatta
     2641 agtatatcaa aaatatgtca aaagatctga caaaaaaagc tgtggagatg ctattgaatg
     2701 gagcaacgct ggtaagcgat ccctgtcctt actgtaaagg tgttagaatc ataaaggagg
     2761 gaaatgcgtt ttgtgtaaat tgtggcaggg aggcaaacga aaaaaaagtt cttgaagtcg
     2821 agcacaaatt aaaggatgac aaaaatgcac actcaccagt tgatcgccta gataagaaac
     2881 taaaagatct taccaatgaa ttataccacg aaaaaaacca tgaaaaacaa caacaaatca
     2941 tccgatcgat aaatgagata atttccatta aggaaagact caagactctc taatcacaaa
     3001 agtatttatt taaaaagact tt
//
LOCUS       DASPUS010000221         3208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1761068, whole genome shotgun sequence.
ACCESSION   DASPUS010000221 DASPUS010000000
VERSION     DASPUS010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3208)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3208
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1761068"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..366
                     /locus_tag="VEJ68_05175"
     CDS             <1..366
                     /locus_tag="VEJ68_05175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06198.1"
                     /translation="NSGLPIFLQISEPGRGDIVNSWIPFDQFLGMVQALDIVDRAHPI
                     DIEIFDATGPNPTLMQLTRDPFADPIQVLFDGIQHIHQCYKQVPESCKKIPAGALSAA
                     TDLVVKERKDVYGHTPSFH"
     gene            complement(492..1019)
                     /locus_tag="VEJ68_05180"
     CDS             complement(492..1019)
                     /locus_tag="VEJ68_05180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06199.1"
                     /translation="MDIQFNPINSAENCAVPSNQLIYGGGDDEFDLELLKIITNFVSQ
                     ILSFIVQIFNAIGSNLDFKSVVTVNSNNNGQIADVTKEVRGEINNVFGDLNNTFSGLN
                     NAMGEVKNSVNDFLKNTNEIVSEAGKNDGNKTTTTTTSLGLFNNVLKKTTTTEKSFLS
                     EDGKWEIYDREVISS"
     gene            complement(1278..>3208)
                     /locus_tag="VEJ68_05185"
     CDS             complement(1278..>3208)
                     /locus_tag="VEJ68_05185"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HXX06200.1"
                     /translation="YLWLENSNSADTQDWLVEQKARFERYRLSNPYTQEIKMTLQDLD
                     DRDLPKNFVRIGEKYLFHQKNALYIQNGLEKEAQLLLDFDDIKGDSSFTLVGYVPSPN
                     GQLVAYGLSENGSDWTTWNILDIASKQRHSEPTGKTKFSTVCWSSDSLGFYYSCFDDQ
                     SIHGVYYHRLGNTQDQDQLIYQDLNNKNYFYIPRISSDRRYLLIDIITGSMAPNSFLC
                     LDLEHLGSSLNLIPFDGSTYWFICNRGSKFYFTTTKDASYRKLIVVDVEDPTSRQDII
                     SEKNCLLADVVSIDNYFLVSYEEAACSKLSLFDHDGKEVRKVPLPDIGVVRFWHGHPD
                     SHGTRDFLEGPVLFSFSNFIRPYTLYRFDLSVGEPIVSRKSQIEVDSDDYSIRQIFYS
                     SKDGTKIPLFIAHKKDLVIDGNTPTMLYGYGAFSQPNLPVYNYMKMAWLQRGGILASA
                     SIRGGGEYGTKWHLAGVKEKKQNSIDDLLAAADWLIGNKYTSPNKLVLYGFSNSAMLT
                     AACANQRPEMFGAIVVIGGIYDMIRYPLFSLGRFWVLEYGNPDDPTELDFIKKYSPYH
                     NINPGIHYPSMLIMVSDMDTRVVPLHSYKYAAALQKTQAGEGEILLRVKHKAGHFADD
                     IEDAVDMLAFIMKELRMN"
BASE COUNT         1025 a          637 c          536 g         1010 t
ORIGIN      
        1 aactcaggct tacccatttt tttacaaatt tctgaacctg gacgaggtga tatcgttaat
       61 tcttggatcc cttttgatca atttcttggc atggtccaag cactcgatat cgtcgaccgg
      121 gcacacccaa ttgatataga aatattcgat gcaacaggcc ccaacccgac cttaatgcaa
      181 ttgactcgag atccttttgc tgatccaata caagtattat ttgatggtat acaacatata
      241 catcaatgtt acaaacaagt tcccgaaagc tgtaaaaaaa ttcctgcagg cgctctatca
      301 gctgcaactg atctggtagt aaaagaaaga aaagatgtct acggccacac cccttctttt
      361 cactaacatt cgggttacca ttcaatgact cataattttt gaaattttgt ggccattaaa
      421 tctccgatca aatccccagg gaaagctaga cacaagctca gactgaactg gcgtcacata
      481 tcaaatttcc cttaagaaga gattacttct cgatcgtaga tctcccactt tccatcttca
      541 gataggaatg atttctcagt ggtggtagtt tttttcaaaa cattattgaa tagacctaga
      601 ctagttgtgg ttgtagtcgt tttgttgcca tcatttttgc cagcttcgga gacgatttca
      661 tttgtgtttt taagaaagtc atttacggag tttttaacct ctcccattgc attgtttaaa
      721 ccactaaatg tattgtttaa atcaccaaaa acattattaa tttcacctct tacttcttta
      781 gtgacatcag ctatctgtcc attattatta gaattcacgg tgacgacgct tttgaaatct
      841 agattagatc caatggcatt aaaaatttga actataaaac ttaagatttg cgaaacaaaa
      901 tttgtgatta ttttcaataa ttccaaatcg aattcatcat cacctccacc ataaattaat
      961 tggttagaag gtactgcaca attttctgca gaatttatag gattaaattg aatgtccact
     1021 gactactcct gtattatttt gcgtaaatta taaactcgag aaattattaa ggaaatataa
     1081 aaaatcatga gtgtaggcat tttttagaaa gtcactttag taattaaaaa ttatttgtag
     1141 tatgagaaaa aatgaatgac tcggttcgaa aaattaaaaa agtttattcg tacgacctct
     1201 atctaatcta aataaattat tttattattc gatgtttaat gtttttaata taagatttat
     1261 ttaaaaataa gtgtggtcta gttcattcta agttctttca taataaatgc tagcatatct
     1321 acagcatctt caatatcgtc tgcgaagtgt ccggctttat gtttaacgcg caataaaatt
     1381 tctccttcgc cagcctgtgt cttttgcaaa gcggctgcat atttatagct atgcaatggt
     1441 accactcttg tatccatatc cgaaaccata atgagcattg aaggatagtg gatccctggg
     1501 tttatgttat gataggggga atatttcttg ataaaatcga gctctgtggg atcgtccgga
     1561 ttaccatact caagcaccca gaatctaccc agagaaaata acggataacg gatcatgtca
     1621 tatataccgc caattaccac aattgcacca aacatttcgg gcctttgatt tgcgcaggct
     1681 gcagttaaca tggcactatt actaaacccg tataacacca atttattcgg acttgtatat
     1741 ttattcccaa ttaaccagtc agccgcagcc aagagatcat caatagaatt ctgcttcttc
     1801 tcttttacac ctgcaagatg ccattttgta ccatattccc ctcctcccct gatacttgca
     1861 gaagcgagta ttccacctcg ttgcaaccat gccatcttca tataattata gacgggaagg
     1921 tttggttggc taaaagcccc gtatccatac aacatagtgg gtgtattgcc atcaatcaca
     1981 agatcttttt tatgagcaat aaacagggga attttagtcc catctttgct tgagtaaaat
     2041 atttgacgaa tagaatagtc gtcagaatca acctcaatct gtgattttct agaaacaata
     2101 ggttcgccta cacttaagtc aaatctatac aaagtatagg gtcttataaa attgctaaat
     2161 gaaaacaaaa cgggcccttc taaaaaatct cttgtcccat gagaatcagg atgtccatgc
     2221 caaaacctta ccacaccaat atctggcaag ggaactttgc gaacctcctt accatcatgg
     2281 tcaaataacg aaagtttact acatgctgcc tcctcatagg agaccaaaaa atagttgtcg
     2341 attgaaacaa catctgccaa taagcagttc ttttcagaaa tgatgtcctg tcttgaagta
     2401 ggatcctcta catccacaac aatcaatttg cggtaagaag catcttttgt tgtggtaaaa
     2461 taaaacttgg accctctgtt acatataaac caataagtgc ttccatcaaa aggaattaaa
     2521 tttagagacg agcccaaatg ttccaaatca aggcatagaa acgaattggg tgccattgaa
     2581 ccggtgataa tatcgatcaa taaataacga cgatctgagc tgattcttgg aatgtaaaag
     2641 taatttttgt tatttaagtc ctgatagata agttgatctt gatcctgagt gttgcctaaa
     2701 cgatggtaat acacaccatg gatagattga tcatcaaaac aagaataata aaagccaaga
     2761 ctatcagaag accagcaaac ggttgaaaat ttagttttcc ccgtaggctc tgaatgacgt
     2821 tgctttgaag ctatatctaa aatattccac gtcgtccaat cagatccatt ttcagataat
     2881 ccatatgcta cgagttgacc atttggactg ggtacataac ctacaagtgt aaatgaagag
     2941 tctcctttta tgtcgtcaaa atcgagcaat agctgagcct ctttttccaa tccgttctgg
     3001 atataaagtg catttttttg atgaaaaaga tatttttcgc caatacgaac aaaatttttc
     3061 gggagatctc gatcatccaa atcctgaaga gtcattttga tttcttgagt atagggatta
     3121 gatagtcgat atctttcaaa cctggctttt tgttccacta accaatcttg cgtatcagca
     3181 ctattcgagt tttctaacca gaggtaag
//
LOCUS       DASPUS010000222         2573 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_258700, whole genome shotgun sequence.
ACCESSION   DASPUS010000222 DASPUS010000000
VERSION     DASPUS010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2573)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2573
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258700"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..167
                     /locus_tag="VEJ68_05190"
     CDS             <1..167
                     /locus_tag="VEJ68_05190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HXX06201.1"
                     /translation="LDRHEHIGLGHIGEKGLAQVIKTINSKKIPIILETPIDEKRDDI
                     GNLKKVKELA"
     gene            195..1652
                     /gene="glyS"
                     /locus_tag="VEJ68_05195"
     CDS             195..1652
                     /gene="glyS"
                     /locus_tag="VEJ68_05195"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007403202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009345 - glycine-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase"
                     /protein_id="HXX06202.1"
                     /translation="MNYDQIMQLALERGFYFPSCEIYSDANAGFWEYGPSGVSMKNKF
                     IELWRRELVRRDRMWEIDGSQIMSQSVFVASGHLSSFADPIVSCQKCKSIFRVDKMIT
                     EITSIVLPESADLSEFDKVISEKKIVCPRCKGQFDNAHKFNMMFKVGIGPESEPAYLR
                     PETCQSIFVDFPRLFKTMRGKLPIGVAQIGKSFRNEISPRQSLLRLREFYQAEIEVFC
                     NPNKLDNLEKFSEVENTELRIMVGDKIETMTCKQALESGILPNKLVAYYLSLLIEFYQ
                     KTGIDVTKSRFRKLGEKEKAFYASVAFDFEVETTIGWLELVACNYRSDYDLKSHTSIS
                     KEKFEVLDDEVKVLPHIFELSMGIDRSLYTILEHSFHEDKEHERILLSLKPYLAPVHV
                     GVLSLMKKDGLAEKTEEIFSTLQRKYDAFLDHSGAIGRRYRRLDEVGAPFAITVDHQT
                     LEDQTVTIRARDSMSQERIKISDLDLHLSKSLMFP"
     gene            complement(1712..>2573)
                     /locus_tag="VEJ68_05200"
     CDS             complement(1712..>2573)
                     /locus_tag="VEJ68_05200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06203.1"
                     /translation="TGTIPSQSLQTPAVLYWIHVENKPGKTSDSDRYSIGVKPSYPII
                     GKLELDIAQNRAAGTTARPTAYFSATGNPEFGTISLVVDGNIVYTSPPQLFTVGQTAV
                     SLEWKTQPTDQLTNHQIQAIANIYDNAFAANATISIFSSVKTMPILQPIQIGVITDKN
                     GHTVATPKVLYSSFENQGNLIFKVTAPDGTCVIGSANDCLVTSSTFGIPGQLKSITIG
                     DQVFRVRYSGTDSTLERFSITSVDPIVGTWSVEIDSTADLLPQAQAMGDVFLKIKYEA
                     IATPFVSQGQ"
BASE COUNT          803 a          439 c          555 g          776 t
ORIGIN      
        1 atttggacag acatgaacac ataggattag gacatatagg cgaaaagggc ttggcacagg
       61 taataaaaac aataaattca aaaaagattc caattatttt agaaacaccc attgatgaga
      121 aacgtgacga cataggaaac ctaaaaaaag tcaaggagct tgcttgactt tagtagacta
      181 gaattggtgt tttaatgaat tacgatcaaa taatgcaact tgcactggaa agaggtttct
      241 actttccaag ttgtgagatt tattccgatg caaatgctgg cttttgggaa tatggtccct
      301 caggagtcag catgaaaaat aaattcattg aactatggag acgagaactt gtaagacgag
      361 acaggatgtg ggaaattgat ggatctcaga taatgtcgca gtctgtattt gttgcatcag
      421 gccatctttc tagttttgct gatcctattg tatcatgcca aaaatgcaaa tccattttta
      481 gagtagataa aatgattaca gaaattacct caatcgtgct tcctgaaagc gctgatttat
      541 ctgagtttga taaagtaatt tcagagaaaa aaattgtatg tcccagatgc aagggtcagt
      601 tcgataatgc gcacaaattc aatatgatgt tcaaggttgg aatagggcca gaatcagaac
      661 ctgcatatct gaggcccgag acgtgtcaat ctatctttgt tgactttcca agacttttca
      721 aaactatgcg tggaaagctt ccaataggag tagcacaaat aggaaagagt tttagaaatg
      781 agatttcccc acgacagagc cttctgaggc tgagagaatt ttatcaggcc gaaatcgagg
      841 ttttttgtaa tccaaacaaa ttagataatc tcgagaaatt ctctgaggtt gaaaatactg
      901 aacttaggat tatggttgga gacaaaatcg agaccatgac atgcaaacaa gctctagagt
      961 caggaattct tccaaacaaa cttgttgcat actatctcag tttgttgata gagttttatc
     1021 agaagacagg aattgatgta acaaaaagta ggtttagaaa actgggggag aaggaaaagg
     1081 cattttatgc atcagttgca tttgattttg aagtagagac taccatagga tggcttgagc
     1141 ttgtggcttg taactacaga tctgattatg acttgaagag tcacacaagc ataagcaagg
     1201 aaaaatttga agtcttagat gatgaagtaa aagtgcttcc gcatattttt gaactttcaa
     1261 tgggaattga ccgaagcctc tacaccatat tagaacatag ttttcacgaa gataaggagc
     1321 atgaaaggat tcttctttcg ttaaagccgt atcttgctcc agttcatgta ggtgtactat
     1381 cacttatgaa aaaagatggc ttggcagaga agacagaaga gattttttca acacttcaga
     1441 gaaaatatga tgcattttta gaccactcgg gtgccatagg aaggagatat aggagattgg
     1501 atgaggttgg agcaccattt gcaattacag tagatcatca gacacttgag gatcaaactg
     1561 tcactatcag ggcacgggat tccatgagcc aagaaaggat aaaaatttca gatcttgatt
     1621 tgcatctctc aaagtctctc atgtttccat aattaaaaac agacaatcat ttcaagatac
     1681 ttgagatgta atcaattacg tagatttgat cttattgtcc ttgagataca aatggagttg
     1741 caatcgcttc atattttatc ttcaaaaaga catctcccat tgcttgagct tgtggtagaa
     1801 gatctgctgt agagtcaatc tctacactcc acgttcctac aattggatct accgatgtga
     1861 tagagaacct ttctagtgta ctgtcagttc ctgagtatct tactctgaaa acttgatcac
     1921 caattgttat gctctttagc tgtccaggta taccaaacgt acttgatgtt acaagacagt
     1981 cgttggcact acctatgaca catgtgccat caggggcagt tactttgaat atcaaattac
     2041 cttgattctc aaatgaagaa tacaagactt ttggagttgc aacagtgtga ccatttttgt
     2101 cagtgattac accaatttgt atcggttgca agattggcat agtcttaact gaggagaata
     2161 tcgatatggt tgcatttgct gcaaacgcgt tatcgtaaat gtttgctatc gcttgaattt
     2221 ggtgatttgt gagctgatcc gttggttgtg tcttccattc tagtgaaact gcggtctgtc
     2281 ctacagtgaa gagctggggt ggtgatgtat acactatatt tccatctact acaagtgaga
     2341 ttgttccaaa ttctgggttt cctgttgcac taaagtatgc agtgggtctt gctgtagtac
     2401 ctgcagctct gttctgtgct atatctaatt ctaatttgcc aataattgga taacttggtt
     2461 tgactccaat tgaatagcgg tcagagtcgg atgtctttcc tggcttgttt tcaacatgta
     2521 tccagtacag tacagcaggc gtttgcaagg actgggacgg aattgtgccc gtt
//
LOCUS       DASPUS010000223         2370 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_114748, whole genome shotgun sequence.
ACCESSION   DASPUS010000223 DASPUS010000000
VERSION     DASPUS010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2370)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2370
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114748"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(145..489)
                     /locus_tag="VEJ68_05205"
     CDS             complement(145..489)
                     /locus_tag="VEJ68_05205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06204.1"
                     /translation="MDKELRTSIHKIKKLRDSVKRRAEIYSSLGSLDDRGTARALGSL
                     QRASAPGKKIQKIGFIFLLSPEPFTTAAGIPMIIAGKYLDKIYNGATIADIGHETKNF
                     AHHLTDFKHSMH"
     gene            609..1064
                     /gene="mntR"
                     /locus_tag="VEJ68_05210"
     CDS             609..1064
                     /gene="mntR"
                     /locus_tag="VEJ68_05210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008299297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator MntR"
                     /protein_id="HXX06205.1"
                     /translation="MKEKRGERLEYIKEAHKSSKADTSRMEDYLEVISELVELKGYAN
                     TIDISSYLNVSAPSVTKMLQKLDDNGYLEYEKYRGINLTVKGNVLADTIRQKHGILLE
                     FFKLLGINYEIANQDAEGIEHHLNPQTIKQLSKFVTFLKTHPKILEDFL"
     gene            complement(1065..>2370)
                     /locus_tag="VEJ68_05215"
     CDS             complement(1065..>2370)
                     /locus_tag="VEJ68_05215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010190109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HXX06206.1"
                     /translation="FSLTVLGENILTKEYLEKITTEVLEASRVNQSGVIEISKPGALV
                     VQFGDYRIVITHRPFSDTYEITITHPIVKLSLEQYNISEKLMQRLSEKAEGILISGAP
                     GSGKSTLASSLADFYSSKGKIVKTFESPRDLQVGEKITQYTHLDGSFENAADILLLVR
                     PDYTIFDEVRRFHDFRVFSDLRLAGVGMVGVVHANAPLDAIQRFIGKVELGMIPHILD
                     TVVFVKGGQISKVYELEFKVKVPSGMTEQDLARPVIEVRNFENHNLEYEIYTYGEENI
                     VIPISKEAKSGGIERLAEFKIKDAIRRFDSEAEIDILSNNSIRVKVDKDVIPSLIGRG
                     GATINELENALGVHIDVEPKDASAGSSEWFEMSESGNNLILEVDDNKTGKEADVYVND
                     KHLLSTHVGKRGRIIISKKSSSGKRIISAVMSKNDIKVVVHR"
BASE COUNT          718 a          455 c          399 g          798 t
ORIGIN      
        1 cggtattgtt aacactccta caacaccaat gattacagct gcgatgacta caggaattag
       61 gacttgggct cttgttgcca caaaaaattt agaattacat ctagttaaaa actaatgcaa
      121 aaaattccat gtgattcttg caagttaatg catactgtgt ttgaaatcgg ttaaatgatg
      181 ggcaaaattc ttggtttcat gaccaatgtc tgcgattgtt gcaccattgt aaattttgtc
      241 tagatattta cctgcaataa tcattggtat gccagctgca gtggtgaaag gttctggtga
      301 caaaagaaag ataaatccta ttttttgtat cttcttgcca ggtgctgatg ctcgctgtaa
      361 agaacctaat gctcgtgcag ttcctctatc gtccaagctt cccaatgagg aataaatctc
      421 ggctcttctt ttgacagaat ctcttaattt tttaatttta tgaatgctgg tcctaagttc
      481 cttatccatt gtctcatgtt tgaagctgtg tagttaagat tccatgcaaa agatcaatta
      541 caataaggta aagatttctg atcaagggat taggttatat cagttaaagt atatcatcca
      601 tctagaaaat gaaggaaaag cgtggtgaac gactggagta tattaaagag gcacataaat
      661 cgagtaaagc ggatacctct aggatggagg attatctgga agtaatatct gaactcgtag
      721 agctaaaagg ctacgctaat acgatagata tatcgagtta cctaaatgta agcgctcctt
      781 cagttacaaa aatgctgcag aaactagacg ataatggtta tctggaatac gaaaaatatc
      841 ggggaataaa tctaacggta aaaggaaatg tcttagcaga tacaatacga caaaaacatg
      901 gaatactttt agagtttttt aaattgttgg ggataaatta tgaaattgca aatcaagatg
      961 ccgaagggat agaacatcat ctaaaccctc aaacaataaa acagctcagc aagtttgtaa
     1021 catttctaaa gacacatcct aaaattcttg aagatttctt ataattatct gtgaactact
     1081 actttaatat cgttttttga cattactgca ctaattattc tcttaccaga actggatttt
     1141 tttgaaatta ttattcttcc tcttttgcct acgtgtgttg aaagtaaatg tttgtcattt
     1201 acatacacat ctgcttcctt tcctgtttta ttgtcatcaa cttcaagtat tagattattg
     1261 cctgattctg acatttcaaa ccactcgcta cttcctgctg acgcatcttt tggctcaaca
     1321 tcgatatgta ctcctagtgc attctcgagt tcatttatgg tagctccacc ccttccaatg
     1381 agggatggta ttacatcttt gtcgaccttt actctgatgc tgttatttga gagaatatcg
     1441 atttcagcct ctgagtcaaa tcttcgaatt gcatctttta ttttaaattc agctaatctt
     1501 tctatcccgc cgcttttcgc ttcttttgat atgggtatta ctatattttc ttcaccgtaa
     1561 gtataaattt catattccaa gttgtgattt tcaaagtttc taacctcgat tacaggtctt
     1621 gctaaatcct gttcggtcat tcctgaagga actttaactt tgaactctag ttcataaacc
     1681 tttgaaatct gtcctccctt gacaaacaca actgtatcca aaatgtgtgg aatcatacca
     1741 agttcaacct tgccgataaa cctctgaatt gcgtcaagag gtgcatttgc atgtactact
     1801 cctaccattc caactcctgc tagacgcaag tcagaaaata ctctgaaatc atgaaacctt
     1861 cttacttcat caaaaatggt atagtccggc ctgactagaa gcaatatgtc tgcagcattt
     1921 tcaaaactac catccaggtg agtatactgt gtgatctttt cacctacttg cagatctctt
     1981 ggtgattcaa atgtttttac aatcttgcct ttactagaat aaaaatctgc aagacttgat
     2041 gccaaggtac tttttccaga ccctggagct cccgaaataa gtattccttc agctttctcg
     2101 gaaagtcgct gcataagttt ctcagatatg ttgtattgtt ctaatgatag tttaacaatg
     2161 ggatgcgtga tcgtaatttc ataagtatca gagaatggtc tatgtgtaat gactattcta
     2221 taatctccaa attgaacaac caaagcacct ggctttgaaa tctctattac tcctgattga
     2281 ttgactctag atgcttccaa tacctcagta gtaatttttt ccaaatactc ttttgttaaa
     2341 atattctctc ctagtactgt taaggaaaat
//
LOCUS       DASPUS010000224         5288 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1484335, whole genome shotgun sequence.
ACCESSION   DASPUS010000224 DASPUS010000000
VERSION     DASPUS010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5288)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5288
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1484335"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..1335)
                     /locus_tag="VEJ68_05220"
     CDS             complement(4..1335)
                     /locus_tag="VEJ68_05220"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HXX06207.1"
                     /translation="MNSFSSIGGLLIGLLGLLSVAYGFNPSVPYAFQAFSAGLVGVAT
                     GGIIVWLSGRKPTKTILTQQLDSKSTKNDSYLELAKYKALYEGSPVMQRTVNTDGIII
                     ECNQAYVKNFGNTKNDVIGTSLFDYAADQSKEDMRKTFENWKKSGKVENSEIWLKRKD
                     GSTFPALLSANNIFDNKGKLMGSNTLIRDISEVYHAHKVVDEHERQKIQLEELKKMDS
                     LKEEFYLTFSKECKIPVDPLKKYCEILKDSSSGKLDVKQLEAIEEIHTNVTKLEQLID
                     DIIDIQKLNNNKMEFKKESFAVDEFMHKINDICSPLMKEKKIEFIVKASTKYVLKSDK
                     TRLNQVFINLVQNAIDFVPHQGGKIEIASREEGNSILFHVKDNGVGISEKRKESIFKK
                     FYQVDISFKRKYGGSGFGLVICKAIIENLGGKIWFESKEGEGTAFYFTIPK"
     gene            complement(1518..2054)
                     /locus_tag="VEJ68_05225"
     CDS             complement(1518..2054)
                     /locus_tag="VEJ68_05225"
                     /inference="COORDINATES: protein motif:HMM:NF037930.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06208.1"
                     /translation="MDIRKETLELAKTTSLELLEEKKSLHDILMTCRSMSKTLQISDM
                     NPWIEFEINGYLVKYKTRDDLYDNLPIYRKTSWKFFDIYGNAISLPPDIMDLFGKSVI
                     YHPVKELESKSEIIIANQFLEKFNKFIGEHGMDYASKSVRIHEAKISKKEINQILEGI
                     KNRIQEFLDTMIAILEID"
     gene            complement(2128..2988)
                     /locus_tag="VEJ68_05230"
     CDS             complement(2128..2988)
                     /locus_tag="VEJ68_05230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HXX06209.1"
                     /translation="MKQEYKVLSSTPKPFVKWAGGKRQLLPVITSHIPKKFERYFEPF
                     LGGGAVFFHLFSHEKQTKWFISDLNSDLILSYVIVRDRVKELISELEFHSNNYFKNPS
                     TYYYKVRESNPKGQIEKVSRLIFLNKTCFNGLYRVNSKGKFNVPLGKYVNPNIVNEEN
                     LYAVSEILQNKNIFIKSQDFEDALKNTSAGDFVYLDPPYQPVSATANFTSYTDSDFDY
                     GEQKRLYAKFKALDKKGVKVLLSNSKSKEILHLFKEFSDGIVEINVNRFINSVSQRRT
                     GHLELLIKNY"
     gene            complement(3132..3782)
                     /locus_tag="VEJ68_05235"
     CDS             complement(3132..3782)
                     /locus_tag="VEJ68_05235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia monooxygenase"
                     /protein_id="HXX06210.1"
                     /translation="MVWLRRCTHYLFIVVVAVNSTLLTINAGDYIFYTDWMWTSYVIF
                     TLSQSLMLAVGAAYYLTFTGVPGTATYYALIMTVYTWIAKGAWFSLGYPYSFIVVPMW
                     IPSAILMDLAYWATKKNKHSLILIGGVLCGMSMSMFNMINLLTIDDPLETAFKYPRTT
                     LPPYMTPIEPQVGKFYDSPVALGAGAGAVLTVTMTALGCKLTTWTYRWMAAWSKWD"
     gene            complement(3900..4265)
                     /locus_tag="VEJ68_05240"
     CDS             complement(3900..4265)
                     /locus_tag="VEJ68_05240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010194915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06211.1"
                     /translation="MTLPKGFGSGGGSTSSDVSKMIGRRIENHAGIITGFFVALWLGT
                     WGGVAVAVTYYPWAYPPPSAHYALTVLTIIEAIGYMLCIKVATEGTDKAKTYNGLIAG
                     VIGAISVATIVTDCFFFGA"
     gene            complement(4374..4937)
                     /locus_tag="VEJ68_05245"
     CDS             complement(4374..4937)
                     /locus_tag="VEJ68_05245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methane monooxygenase/ammonia monooxygenase
                     subunit C"
                     /protein_id="HXX06212.1"
                     /translation="MAQMPALIPKEVEIQRLKKIWMIIIALGSIAASVEVDNFVDGSL
                     HQTSIRDSAFTPAHWWLYSHFVALPLGWGAIAIYDRKVPILRGPNNSMNTGLKMTILG
                     YLATMFTIGVNEMWHFWYVEEIFAVPNHWMFNMGVVVAFMGALAYVVRVYARLVELGA
                     ETPGENPYVAEMYKMALEGKLYSRSIP"
BASE COUNT         1571 a          989 c          899 g         1829 t
ORIGIN      
        1 agatcatttt ggaattgtga aataaaatgc agtaccttct ccttctttgc tttcaaacca
       61 aatctttccc cccaagtttt caattatcgc tttgcaaata accaatccaa atccacttcc
      121 cccgtatttt cttttaaatg agatatcaac ttgataaaat ttcttaaaaa ttgattcttt
      181 ccttttctca gatataccca ctccattatc tttgacatga aataagatgg aatttccttc
      241 ttcacgagaa gcaatctcaa tttttcctcc ctgatgaggt acaaaatcaa tggcattttg
      301 aactaaatta atgaacacct gatttagtcg tgttttgtca ctcttaagaa catattttgt
      361 agatgccttt acaataaatt ctattttctt ttctttcatc agtggtgaac aaatatcatt
      421 tattttatgc atgaattcat caactgcaaa cgattctttt ttaaattcca ttttgttgtt
      481 gttgagtttt tgtatgtcaa ttatgtcatc tattagttgt tctaattttg taacatttgt
      541 atggatttct tctattgctt cgagttgttt aacatctaat ttaccacttg aagaatcttt
      601 taaaatttca cagtattttt ttagtggatc tacagggatc ttacattctt ttgaaaatgt
      661 caaataaaat tcctctttta gagaatccat tttctttaat tcttctagtt gaattttttg
      721 tcgttcgtgc tcatctacta ccttatgtgc atgataaact tcggaaatgt ctcttatcaa
      781 cgtgttactt cccatcaatt tgcctttgtt atcaaatatg ttatttgcac taagtaaagc
      841 tgggaaggtg ctcccatctt ttctttttaa ccaaatttca gagttttcaa ccttcccgct
      901 tttcttccaa ttttcaaaag ttttacgcat atcctccttg ctttgatcag ctgcgtaatc
      961 aaaaagtgac gttcctataa catcattttt tgtgttgcca aaatttttta catatgcctg
     1021 gttacactca attattattc catcagtgtt aacggttctc tgcataacag gtgagccttc
     1081 gtaaagagcc ttgtattttg caagttctaa ataggaatca ttttttgtgg atttggaatc
     1141 aagttgttga gtaagaatgg ttttagttgg ctttctacca cttagccaaa caataatacc
     1201 tcctgttgcg acacccacta gacctgctga aaatgcttga aatgcataag gtacgcttgg
     1261 attgaatcca tacgcaacgg acagcaaacc caaaagccca attaacaaac ccccaatgga
     1321 actaaaagag ttcaattata cctccaagtt tcgagttttt tatggaatgc tgtagaatta
     1381 aagttaggaa gaaaacatga agttagaaaa atgaagcatg tttgagaata tgcaacccct
     1441 ctcaatagca gtataaggta atactagaag attaactttt cataaaaatt atttcaagat
     1501 atcatcaaat tgaacaatta atcaatttca agtattgcta tcatagtatc aaggaattct
     1561 tgaattctat tttttatgcc ctctaaaatt tgatttattt cctttttcga gatttttgct
     1621 tcatgaattc ttacactttt tgaggcataa tccatcccat gttcaccaat aaatttattg
     1681 aatttttcca agaattggtt cgctattatt atctcacttt tactctccag ctcctttact
     1741 ggatgataaa tgacagattt accaaaaaga tccattatat caggtggcaa tgatattgca
     1801 tttccgtaaa tatcaaagaa tttccaacta gtttttctgt aaattgggag attatcatat
     1861 agatcatctc tggttttgta tttaacgaga tatccattta tctcaaattc tatccagggg
     1921 ttcatgtctg agatctgaag agttttactc atacttcgac atgtcattag tatatcatgc
     1981 aatgattttt tttcttctaa aagttctaag ctagttgttt tagcaagctc taaggtttct
     2041 tttctaatat ccaactcaac aaccctggaa tttcctttga ttttacttta tctagttgga
     2101 tggagtctga taggttctgt agtaggtcta atagttttta attagaagtt ccaaatggcc
     2161 agttcttcgt tgtgaaacag agttaatgaa ccggtttaca ttaatctcta ctatcccatc
     2221 agagaattcc ttgaaaaggt gtagtatctc ctttgattta gagtttgaca gaagcacttt
     2281 gactcccttt ttgtcaagtg ccttaaattt ggcatacaga cgcttttgtt caccatagtc
     2341 aaagtcagaa tctgtgtaac tagtaaagtt ggcagttgca cttactggtt ggtaaggagg
     2401 atctagatat acaaaatcac ctgcagatgt attttttagg gcatcttcaa aatcttgaga
     2461 tttgatgaaa atattcttgt tttgtagaat ttcgcttact gcatatagat tttcctcatt
     2521 tacaatattt ggatttacat attttccaag tggaacattg aattttcctt tgctgtttac
     2581 ccgatacaat ccattgaaac aggtcttatt tagaaagatt aatcttgaca ccttttctat
     2641 ttgccctttt ggattacttt ctcgtacctt gtaataatac gtacttggat tcttgaaata
     2701 attattagaa tgaaattcta attcagaaat gagctctttt actctatctc gtactataac
     2761 atatgataaa attagatcag aattgagatc tgagatgaac cattttgttt gtttttcatg
     2821 tgagaacaaa tgaaaaaaaa ctgcaccacc acctagaaac ggctcgaaat atcgttcaaa
     2881 tttttttggg atatgactag ttatcactgg taatagttgt cttttacctc ccgcccattt
     2941 tacaaaaggt ttgggagtgg atgaaagaac tttgtactct tgcttcaata tagactaatt
     3001 tcgaaatctt attttgtgta atatggcaac aaaagatcac acactgtgta acttttttta
     3061 atctaaatga gatgaaacct aatttacatt aggattattc tagataaaat aaagtaaaag
     3121 gaaaagggag tttagtccca cttactccaa gctgccatcc atctgtaagt ccatgttgtt
     3181 agtttacagc ctaatgcagt catagttacg gtaaggaccg caccagcacc tgcacctagc
     3241 gctactggac tatcatagaa tttccctact tggggctcta taggagtcat gtatggaggc
     3301 agtgtagttc ttggatattt gaaagcagtc tccaatggat catctattgt caatagatta
     3361 atcatgttga acatcgacat ggacattcca caaagcacac cgccaattag gatcaaagag
     3421 tgtttgtttt tctttgttgc ccaatacgcc agatccatca atattgcaga tggtatccac
     3481 attggtacaa cgatgaaact gtatggatat ccgagggaga accacgcacc ttttgcaatc
     3541 catgtataca ctgtcattat cagtgcatag taggttgccg ttcctggaac accagtaaac
     3601 gttaggtaat atgctgcacc aactgcgagc atcaatgatt gtgatagagt aaatatcaca
     3661 tatgatgtcc acatccagtc agtgtagaat atgtagtctc ctgcgttgat cgtcaacaag
     3721 gtcgagttga ctgctaccac tactatgaat aagtagtgag tacatcgtct tagccagacc
     3781 attagctact aatgacatat gtggtgtata taagatttta tgatacacca tggatcagaa
     3841 tatggcctct gctaaagttc acgaattaat aaaataaagg aaaaatggat agttcctttc
     3901 tatgcgccaa agaagaaaca atctgtgact attgttgcta ctgaaatagc gcctattaca
     3961 ccagcaataa gaccattgta tgtctttgcc ttgtcagtgc cctcagttgc tactttgata
     4021 cataacatgt atccgatagc ctcgatgata gttagtactg taagagcata gtgtgcgctt
     4081 ggcggtggat acgcccatgg atagtaggtt actgcaacgg caactcctcc ccaagttcct
     4141 aaccacaagg caacgaaaaa acctgtgatt ataccagcat ggttctcgat acgccttcca
     4201 atcatcttgg aaacgtcaga acttgtggat ccgccaccag aaccaaatcc ttttggtaaa
     4261 gtcatttggc ttaattagaa aggagtatgc ttttaagttt ttcctgagag agtgtgttaa
     4321 ttttacattc tagatcttaa aaataagaaa aaagtgcgcg taagtacgcg tgtttatggg
     4381 atggatctgc tgtacaactt gccctctagg gccatcttgt acatttctgc aacatatggg
     4441 ttctcacctg gtgtttctgc acctagttcg accagtcgtg cgtagactct taccacatag
     4501 gcaagtgcgc ccatgaatgc tacgactaca cccatattga acatccagtg gtttggaact
     4561 gcaaagattt cctctacata ccagaagtgc cacatctcat tgacaccgat tgtaaacatg
     4621 gttgctagat aacctagaat tgtcatctta agaccggtgt tcatggagtt gtttggacct
     4681 ctcaggattg gtacctttct gtcatagata gcaattgcac cccaacctaa tggtagggca
     4741 acaaagtgac tatacaacca ccagtgtgct ggtgtgaagg cactatctct gattgatgtc
     4801 tggtgtagag atccatctac gaaattatcg acctctacgg atgctgcgat cgatcccaat
     4861 gctatgatga tcatccagat cttcttcagt ctctggatct caacttcttt tggaatcagt
     4921 gctggcattt gtgccatgtg ttgggattgt tttatgctta tttaaagcat gagttaaaat
     4981 aaatatattt tattttataa tttttatata tttagatgta ttatatacaa ataaaatcaa
     5041 tttcagatat aaaacaattt agaaaatata tttcaaaaat tgattgcaac tatgcataac
     5101 attgatgtta aacatgatgt tatctcatat aatcctcaga tcacgcccca ggcagggcaa
     5161 aacatatatc gttgtacttt gtcagttggt ttagttaagc gatatggtcg ataagaagtt
     5221 tattgtagct gcgataggtg tggtcgtcgc acttggagca gttggaccat cattagtaca
     5281 aatgttcc
//
LOCUS       DASPUS010000225         2071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_115644, whole genome shotgun sequence.
ACCESSION   DASPUS010000225 DASPUS010000000
VERSION     DASPUS010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2071)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2071
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115644"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..769
                     /locus_tag="VEJ68_05250"
     CDS             <1..769
                     /locus_tag="VEJ68_05250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06213.1"
                     /translation="EKLETQKDYLQEKISEQSQKEESQKELDELRKEIEDNASMLDSY
                     SRELENIKSELDLATKDTQNARDELASVKSEISSIEGQRDLVLEQIKGAKADLAMIKS
                     QYNQKEAEEIRRQTEQIRDEMYSISSEKERKISEIDELETSISSSRSELDELTSTIQK
                     AKSELGSLKSQQEAMKKEIQNTKNELEFIEKELSSVGRKDDTKKIVEAAGAFAASIKA
                     KYEATNRELEVVKVALARAKEEYAEVRKELDLLKAKL"
     gene            complement(800..>2071)
                     /locus_tag="VEJ68_05255"
     CDS             complement(800..>2071)
                     /locus_tag="VEJ68_05255"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HXX06214.1"
                     /translation="AIMTPITGRLSDVYGKKKMLLIIMLIYAVGVSLGGFVTNIYEML
                     SIRIIQGIGMSMFPIAFGIVREQFPRKKLAIGQGIISSMFAAGAVIGLVVGGSLIQNY
                     GWQSTFYSIIPIVLFLLVIIKKFIQIGEVHPEWKIEETDHKDGKKNGFDIPGAATLAV
                     TITAFLMALTFVEEGDSIGFTVIGLVAIGVVFFVLFVIIEKKSKSPLINFDILLHKAI
                     LPSNVMVMIVGLSMFMVFQTIPVLVRSPLPLGFGGDPTATANVQLPFALVLLIFGPTS
                     GFIISRLGSTKPIIVGSIIGTVGFISLFMYHSTEFLVSVNLAILSTGLSLTNVGAMNI
                     VMLATPKQNVGVSLGMSTLIRIIGASIGPAMAGMFMQTHKTSLPGIVGTFPTPDSYNL
                     IFFSASIISAISIGLAIFLKRTISKTNIHTT"
BASE COUNT          742 a          395 c          404 g          530 t
ORIGIN      
        1 tgaaaaacta gaaacgcaaa aagactacct tcaggagaaa atatcagaac agtctcagaa
       61 agaagaatcc caaaaagagc tcgatgagtt aagaaaagag atcgaggata acgccagcat
      121 gttagattcc tattctcgcg aacttgagaa tattaaatca gaactggact tggctacaaa
      181 agatacacag aatgcaaggg acgaacttgc gtctgtcaag tccgaaattt cctcaattga
      241 aggtcagcgt gacttggtgc tagaacagat caaaggagcc aaggcagatc ttgcgatgat
      301 aaaatcgcaa tataatcaaa aggaggcaga ggagataaga cgccaaaccg agcaaatcag
      361 agacgagatg tattccataa gctcagaaaa agagagaaaa atttctgaga ttgacgagct
      421 ggaaacaagc ataagttcat ccagatcaga acttgatgaa ttaacatcta ctattcaaaa
      481 ggcaaaatct gagcttggtt cattaaaatc gcagcaagaa gccatgaaaa aagagataca
      541 gaatacaaaa aatgagttgg aattcataga gaaagaactt tcctcagtag gccgaaaaga
      601 tgatactaaa aaaattgtag aggcagcagg cgcctttgca gcatcaatca aggcaaaata
      661 tgaggccaca aacagagaat tggaggtagt caaagtcgca ctagcaagag caaaagagga
      721 atatgccgaa gtaagaaaag aacttgattt gcttaaagca aaactttaag gtaaaaatgt
      781 aacacagaac ttggctttcc tatgtagtgt gaatgttagt ctttgatata gttcttttta
      841 gaaatattgc aaggcctatt gatatggcag atattattga agcactaaaa aatatcaaat
      901 tatacgaatc tggtgtagga aacgtaccaa ctattccagg caatgatgtc ttgtgagtct
      961 gcatgaacat tcctgccatg gcgggcccaa ttgatgcgcc tattattctg atcagggtac
     1021 tcatccctaa agagactcct acattttgtt ttggtgttgc aagcatcact atattcatcg
     1081 caccgacatt ggtaagtgac aagcctgtag atagtattgc aagattaaca gagaccaaaa
     1141 actctgtaga atgatacatg aaaagactga tgaagccaac agtaccaatt atactgccta
     1201 caattatcgg ttttgtcgaa ccaagtcgtg aaataataaa acctgaagtg ggtccaaaga
     1261 ttaggagaac taacgcaaac ggaagttgaa cgtttgcagt tgcggtcgga tctcctccaa
     1321 aacctagcgg caatggactt ctgaccagta caggtattgt ctgaaagacc ataaacatgg
     1381 acaagcctac aatcattacc ataacatttg atggaagaat tgccttgtgc aagagtatat
     1441 cgaagtttat caaaggcgat ttggatttct tctcaattat aacaaaaagt acaaaaaaca
     1501 ctacccctat tgcaactaag ccaatcactg tgaatcctat cgagtctcct tcttcaacaa
     1561 aagtaagcgc cattaaaaat gcagttatgg ttactgcgag cgttgcagcc ccaggaatat
     1621 caaatccatt ttttttacca tctttatggt ctgtttcttc tatcttccat tcagggtgaa
     1681 cttctcctat ctgtatgaat tttttaatga ttacaaggag aaacaagacg ataggaatta
     1741 ttgaatagaa tgtagattgc cagccatagt tttgaattag actgcctcca acaacaagtc
     1801 ctataacagc accggctgca aacattgacg atattattcc ctgtccaata gccaattttt
     1861 ttctcggaaa ttgttctctg actatgccaa aggcaatagg aaacatggac attcctattc
     1921 cctgaataat tcgaattgat aacatctcat agatgttagt aacaaatcct ccaagtgaaa
     1981 cccccactgc ataaatcagc attataataa gcagcatctt ttttttaccg taaacatcag
     2041 acaatctacc tgtgatcggc gtcatgattg c
//
LOCUS       DASPUS010000226         4810 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1214058, whole genome shotgun sequence.
ACCESSION   DASPUS010000226 DASPUS010000000
VERSION     DASPUS010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4810)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4810
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1214058"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1184
                     /locus_tag="VEJ68_05260"
     CDS             <1..1184
                     /locus_tag="VEJ68_05260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06215.1"
                     /translation="VTTQTGALNVVTTFDNLYVKPNLSQLQANITEYKFPDNKAMPLY
                     PIYDVIRNTVWVGDSAINSGRIWEFNLNSKQFIEHKINGTNIITSATMDFNNNIWYID
                     PISKILGYYEPDTGKVQNYPIPNNGTVSGLAIDNSDNPWLTVSSTGQVLKFDGSSKTF
                     HSINLSSNSVPLGISIDQSSGQIWVAESGAGKIANIDPTQNYKISEYSPFNRTLASPT
                     AILYDSVTGKVFVSEHDGKAVSVFDPLVQTFQKYYTDTQGLPFGMAFDANHDLWLAQH
                     TLNKIAVKDSRTGKNTEFDIPTHSSFTQWVTTDSHGDIILAEQRANALGILSSSLRPG
                     FVENTEQGNVSLGLPIGFSYADLTGPAITVSLVAVAFMYSKSTIELGDAIRKVKKSYD
                     R"
     gene            1456..2382
                     /locus_tag="VEJ68_05265"
     CDS             1456..2382
                     /locus_tag="VEJ68_05265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06216.1"
                     /translation="MRGKIIILLSLMVLAGVLSEHPALAHNFVQNSNADLIAKIQEFK
                     VETNLIANNISNNTLAQWHVSKSQEYIGSNDIGTLAQKDPTLSNNLSTAIDELYSLAG
                     QPNADPATASQKASSLSQILDQVESEEISTADQNNATIQSLALVNVVNQALKDYGDAI
                     GSTVDLTNMSNMNMGSSSGNMQGMSGMQSSGNMQGMSSTTIVNDGDYQSAQALTNTAQ
                     VMFNNLKSISPTSSSPYLDKIDSALTSLKQAIDSKESGDDVMMIVHMQIHPNLISAFN
                     IQSVPEFPIPVLLAIVSFIGIVAISKIPTKIK"
     gene            2482..2874
                     /locus_tag="VEJ68_05270"
     CDS             2482..2874
                     /locus_tag="VEJ68_05270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06217.1"
                     /translation="MFKPETLIGTKSTLLSIIVFSLIGLLSIPVILPHIFHEYTLFHV
                     LLHISGIGFAIFLTIIAAVAYYRVRTRRLLFTTIAFAGFAASESFSLIDAAWQYEFYW
                     WQFSPAEVGHLLMMFTLLMFAISVFRRD"
     gene            2875..3444
                     /locus_tag="VEJ68_05275"
     CDS             2875..3444
                     /locus_tag="VEJ68_05275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HXX06218.1"
                     /translation="MDIFGNLTNHYIEDSANGNKSNLKLDRSHQIVKIIEKNPGIKFR
                     EIMREIGMKNGVLGYYANKLEKEGVVKVERRPGQTRFFPPSVSDSDILIIKNLRQETP
                     RQILTSLLRNEMLSFSELVKNVKKSPATVSLYLTQLKNDGMVESSLINLKRYHKIKNI
                     EKLQMMINKYHPTLIERSADRLADTFSSL"
     gene            3568..>4810
                     /locus_tag="VEJ68_05280"
     CDS             3568..>4810
                     /locus_tag="VEJ68_05280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06219.1"
                     /translation="MYLTKIIYLFIIIFSISIPLITHAYGDGLASEVLPPSVIGNKNV
                     TLSIGSTPFLIDSNHTGTQLGIILLDATTQQPIPQATIAISAFKGDNSLFGHIFQSDG
                     GNFVLSFYPQPSGDILVNELGNPISSFFGQHSGIYSINGPVFNSAGLYHFKMEVLTMS
                     SYDNQISKSFNAAISIPEYDKYAIVDNKYGKQQIQVIAYYDQINNFKYDPATRFINFS
                     MPFDWSKQNIDSLSILHQEIQVPRAFGDYIVTKYDAYVNNIKLPDKALTIDDYSSDTN
                     RVVHIILYKQEVQNLLSELKNPEGQMTFSLRPNTENAFPVVQLTRNAQFKVALSWDPP
                     KILAGDTTTFNFKILDPSQNQTVSGITYDFSVLEGKNGVIYHQVGKTTSSPSGDNIAV
                     PFPSNYTGAVTIAFENLKDNSF"
BASE COUNT         1695 a          891 c          812 g         1412 t
ORIGIN      
        1 gcgtaacaac tcaaacaggc gcgcttaatg tagttacaac ttttgataac ctatatgtca
       61 aaccaaattt gagtcaatta caagccaata tcacagaata taaatttcca gataacaaag
      121 ccatgccatt atatccaatc tatgatgtta tcagaaacac agtatgggta ggagactctg
      181 caataaacag tggaaggata tgggaattta atttaaactc aaaacaattc atagaacata
      241 aaatcaatgg aacgaacatc atcacttctg ctacgatgga tttcaataac aatatttggt
      301 atatcgatcc aatctcaaaa attttaggat attatgaacc agatacagga aaggtccaaa
      361 actatcccat cccaaacaat ggcacagtat caggtcttgc tatcgataac tcggacaatc
      421 cttggctaac tgtctccagc acaggccaag ttttaaaatt tgatggttcc tcaaaaacat
      481 tccattctat aaatttgtct tctaattcag tacctcttgg aatttcaata gatcaatcaa
      541 gcggacagat atgggtggca gagagcggtg ctggaaagat agcaaatatt gatccaacac
      601 aaaattacaa aatttcagaa tactctccat ttaacagaac acttgccagt cccacggcca
      661 tcttatatga ttctgtgact ggcaaggttt ttgtttcgga gcatgatggt aaagctgtct
      721 cagtttttga tcctctggtt caaacattcc aaaaatatta tacagataca caaggtttgc
      781 cctttggaat ggcttttgat gcaaatcacg acttgtggtt agcccaacac accctaaaca
      841 aaattgcagt caaagactca agaactggca agaatactga gtttgacatt cctactcact
      901 cgtcttttac tcaatgggta actactgatt cacacggaga cataatttta gcagaacaac
      961 gcgcaaatgc tcttggaatt ctatctagta gtctgagacc aggttttgtt gaaaatacag
     1021 aacaaggaaa tgtgagctta ggtttaccaa taggcttcag ttatgcagat ttgacgggtc
     1081 ctgcaataac ggttagcctt gtagctgttg ctttcatgta ttcaaaaagc accatagaac
     1141 taggcgatgc catcagaaag gtaaagaaga gttatgacag gtaatggttg tatcaatagt
     1201 ataaagtgaa ccaagtttaa tgaaaaatta agattctaaa atcacgtagt ttacaataaa
     1261 acacatctct tacgtaatca gaaagcggtt ttcttcttcc ataccttgaa ttttttagtt
     1321 tttcagataa tgacatgcca ttacctataa tacaagtttt ttatttcata ctagaagacg
     1381 gtactacgta gtatgtgttt tcttcgaaaa ttgtaccgtc atatttaaaa tacattataa
     1441 aatatccata ttatcatgcg gggaaaaatt ataattttat tatcattgat ggttttggcg
     1501 ggcgtattat ccgaacatcc tgctctagca cataactttg ttcaaaattc aaatgctgat
     1561 ttgattgcaa agatccaaga atttaaggta gagaccaacc taatagcaaa caatatttca
     1621 aataacactt tggcacagtg gcatgtaagc aaaagccaag agtacattgg atcaaatgat
     1681 atagggactc tcgcacaaaa agatcctacg ctttcaaaca atttatcaac agcaatagat
     1741 gaattgtatt cattagcagg acaaccaaat gcagatcctg caactgcatc acaaaaggct
     1801 tcatctctta gtcagatctt agatcaagtc gaatcagaag agatcagcac agcagatcaa
     1861 aataatgcca ctattcaatc gttggcatta gtaaacgttg taaatcaagc attaaaagac
     1921 tatggagacg caataggatc gacagttgat ctgaccaaca tgtcaaacat gaatatgggg
     1981 agttcatctg gtaacatgca aggtatgtct ggaatgcaat catctggtaa catgcaaggc
     2041 atgtcaagta caactatagt caatgacgga gattaccaaa gtgctcaagc acttacaaat
     2101 acagcgcaag ttatgttcaa taacctaaaa tcaatatcgc caacaagttc ttcgccatat
     2161 ctagacaaaa ttgatagcgc tttaacaagc cttaaacaag caatagactc aaaagaatca
     2221 ggagatgatg tcatgatgat agtacacatg caaattcatc caaatctaat atctgcattt
     2281 aacattcaat ctgtgccaga atttcccatc ccagtactgt tagcaattgt ttcatttatt
     2341 ggaattgtgg caatatcaaa gattccaaca aagataaaat aatgggaata aatacaatac
     2401 cattgcagtc agcaaaatta taatgcctat atttgaaaat tgtaccagtt ggtttaaatt
     2461 tcattttgtt cattttttac cgtgtttaaa ccagagacat taatcggaac caagtctacc
     2521 ctgttaagca taatagtatt ttcacttata gggttgctat caataccagt aatattacct
     2581 cacatattcc acgaatatac attatttcat gtccttctgc atatcagtgg aataggattt
     2641 gcaatttttc taaccatcat agctgcagtt gcatattaca gagtgagaac tcgaagactt
     2701 ctttttacca cgatagcatt tgcaggtttt gctgcgtcag agtctttttc ccttattgat
     2761 gcagcttggc agtatgaatt ttactggtgg cagttttctc ctgcagaagt aggtcactta
     2821 ttaatgatgt ttactttact gatgtttgca ataagtgtgt ttaggaggga ctaaatggac
     2881 atatttggta atcttacgaa tcattatatt gaagatagtg ccaacggtaa taagagcaat
     2941 ttaaaattgg acaggagtca tcaaattgtc aaaataattg aaaaaaatcc aggaataaag
     3001 tttcgtgaga taatgagaga aataggtatg aagaatggcg ttctggggta ttatgcaaac
     3061 aagcttgaaa aagaaggtgt tgttaaagta gaaagaagac ctggtcagac tagattcttt
     3121 cctccaagtg tatcagatag tgatattctg ataataaaaa acctaagaca ggaaacccca
     3181 agacaaattc ttacttcgct gttaagaaat gagatgcttt cttttagcga attggtcaaa
     3241 aacgtaaaga aatcacctgc cacagtttca ctttatttga cacaattgaa aaatgacgga
     3301 atggtagaga gttcacttat caatctcaaa agatatcata aaattaaaaa tattgaaaag
     3361 ttgcaaatga tgattaacaa atatcatccg actttgattg aaagatcagc cgatcgcttg
     3421 gcagatacct tctcatccct ttaaatgttc aatatatcaa aaaataccta cgtctgtttt
     3481 tgctagattc gtaacaaaat tgaaccaaga cataacaaga actaggtcta gagtttattt
     3541 agaatcaaaa actaagtaaa acgaaagatg tatctcacaa aaataatcta tctatttata
     3601 ataatttttt caatatcgat tccattaatt actcacgcgt atggagacgg actagcaagc
     3661 gaggtactcc caccatccgt gataggaaac aagaatgtaa ctttgtccat tggatctact
     3721 ccatttctca tagattccaa tcatactgga acccaattag gcataatatt gttggatgca
     3781 acaacacaac aacccatacc acaagctaca attgcaattt cagcctttaa aggtgataac
     3841 tcactttttg gacatatttt tcagagcgat ggaggaaatt tcgtattaag cttttatcca
     3901 caaccatcag gagacatttt agtaaacgaa ctaggaaacc caatctcctc atttttcggg
     3961 caacattctg gaatttattc tataaatggc ccagtcttca actccgctgg attgtatcat
     4021 tttaaaatgg aagttttaac gatgagttcc tatgacaacc agataagtaa atcattcaat
     4081 gcggccatat cgattccaga atatgacaag tatgcaattg tcgataacaa atatggaaaa
     4141 caacagatcc aagtgattgc atactatgac cagataaaca atttcaagta tgatcctgcc
     4201 acacggttca tcaacttttc catgccattt gattggtcaa agcaaaatat tgattctctt
     4261 tccatacttc accaagagat tcaagttcca agagcatttg gtgattacat tgtaacaaaa
     4321 tatgatgcat atgttaacaa tatcaaatta ccagacaaag cactaactat tgatgattat
     4381 tcttctgata ccaatcgagt tgtacatatc atactataca aacaagaagt gcaaaatctg
     4441 ttatctgaat taaagaatcc agagggacaa atgacatttt ccctgagacc aaatactgag
     4501 aacgcatttc cagtagtaca gcttaccaga aatgcccaat tcaaggtggc attaagttgg
     4561 gatccaccaa aaattctagc aggagatacc actactttta acttcaaaat acttgatccc
     4621 tctcaaaatc aaactgtaag tggtattacc tatgattttt cagttcttga aggaaaaaat
     4681 ggtgtgatat atcaccaggt tggcaaaaca acaagttccc caagtggtga taacattgca
     4741 gtaccttttc cctcaaacta tactggagca gttactatag catttgagaa tctaaaagac
     4801 aatagcttcg
//
LOCUS       DASPUS010000227         4331 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1343800, whole genome shotgun sequence.
ACCESSION   DASPUS010000227 DASPUS010000000
VERSION     DASPUS010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4331)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4331
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1343800"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..344
                     /locus_tag="VEJ68_05285"
     CDS             <1..344
                     /locus_tag="VEJ68_05285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GMP synthase (glutamine-hydrolyzing)"
                     /protein_id="HXX06220.1"
                     /translation="MGDITPEKLQICKQASKIVEDELLSSGLYDRVWQAFAAVGDDRA
                     VGVVGDERKYGHVVLVRVVDSIDAMTADWTRLPTEVLEKISNRITNEVEDVAWVSYVV
                     SSKPPATIEPQ"
     gene            complement(453..1163)
                     /locus_tag="VEJ68_05290"
     CDS             complement(453..1163)
                     /locus_tag="VEJ68_05290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06221.1"
                     /translation="MKLSKIIFLSLIIGILAVATVSFEASAQQIVIPQWIRSNAKWWS
                     EGNITDTEYVKGLQYLITQGIIQIPNQIPNPIPTTTVTATNSNLSPNTMAQSLVVHFT
                     TSTNTITFNTFSKLGMFGMTEGGPTAPSTNTGGPPSFYLESIPTKDKQSYYSYVNQYL
                     NIATTNSDYPLFDVSIDLLAGDGSIVETVHYTQCKFLSYIPYVNDFKDTYRFSGQDSS
                     EIRDISTFQCAKIALTTS"
     gene            complement(1257..2261)
                     /locus_tag="VEJ68_05295"
     CDS             complement(1257..2261)
                     /locus_tag="VEJ68_05295"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HXX06222.1"
                     /translation="MLEKLQNLKHTRSVVVLNDFFLDRIVKISNVNKVYQQIIEKSEF
                     GGSIRGISQKDIKGGNATNVAYALARLGCPVTLITVADKASTILLKETFSEFQHASLF
                     VIDGKPGRTTSLEFLNENKIVNIMLSDLGDNENFGPEKLGTKEQEAIKRSSAVMVANW
                     ASNEKGTELCKFVFEKSPDSLHFLDPADIQTRASEFKEAIRKIGPLLDSLCVNENECN
                     ILQKQYGLECKPGIKETKKSLLNLSKKASIPIDLHTSTGACWSNGKDVDFVQSFSVKP
                     NFVTGAGDVWDAANIVGYLANLDTHERLLFANGAASLYVGNTQGIPPTLNEVMKLITK
                     "
     gene            complement(2271..3905)
                     /gene="thsB"
                     /locus_tag="VEJ68_05300"
     CDS             complement(2271..3905)
                     /gene="thsB"
                     /locus_tag="VEJ68_05300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thermosome subunit beta"
                     /protein_id="HXX06223.1"
                     /translation="MASIQQTPQGPVLVLKESALQQKGRDAQKNNIAAAKLVTELVRT
                     SLGPRGMDKMLVDSLGDVTITNDGATILKEIDVQHPAAKMMVEISKTVDNEVGDGTTS
                     SVVFAGSLLAKAEELLEKDVHATVIIEGFQAAAEKALSLLQELAKPISPSEKDVLIKV
                     AKTSMESKLVSEDSDMLSKLVVDAILQVVEKEVEGHKVDLDNIKVEKKAGGSIRNTKL
                     IKGIILDKEVVHSGMPTKIEKAKIALLNSALEIEKTEMSAEIRISDPTQMQMFLEEEN
                     RMLKAMVDKIHEIGANVLICQKGIDDIAQHYLAKQGILSVRRVKESDMTKLAKACGGR
                     ISSNIDDMTSKDLGTAELVEQRKVETEKWVFVEGCKNPRAITVLIRGGSQRVVDEVDR
                     SLHDSLMVVKDVIEKPAVVAGGGAPEEYLASQLKDWADRFEGREQLAIKKYAEALEII
                     PLTIAENAGMDPINTMVTLRAKQSQGKKWTGIDARNTRVADMYTQDIIEPAAVKEQII
                     KSATEAACMILRIDDVIASSGGKGGGARGPPMPPMG"
     gene            complement(3949..>4331)
                     /locus_tag="VEJ68_05305"
     CDS             complement(3949..>4331)
                     /locus_tag="VEJ68_05305"
                     /inference="COORDINATES: protein motif:HMM:NF024774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adenine deaminase C-terminal domain-containing
                     protein"
                     /protein_id="HXX06224.1"
                     /translation="ARIGAFGSTQSFHENDMIVIGSNEKDMAVVANQLTKSQGGMLAV
                     KDGNILCKFDMTVGGLISKLPLEEATKQYSDIDSKIIDAGCKFKQPHLIPIFLPFLAL
                     PEVRILYNGIVDVKNRTYLKIFNQ"
BASE COUNT         1175 a          851 c          786 g         1519 t
ORIGIN      
        1 tgatgggaga tataacacca gaaaaattac agatttgtaa acaagcaagc aaaattgtag
       61 aggacgagct attatcttca ggattgtatg acagagtgtg gcaagcattt gctgcagtag
      121 gtgatgatag agctgtagga gtagtaggag atgagcgaaa atatggacat gttgtactcg
      181 tacgcgttgt agactcgata gatgcaatga ctgcagattg gacgagacta ccaacggaag
      241 tattagaaaa aattagcaat agaattacaa acgaagtaga agatgttgct tgggtaagct
      301 atgtggtttc aagcaaaccg ccagcaacta tcgagcctca gtaaaaatgg tttacccccg
      361 tttttagcgt caaaagctgc tgtatgtcgt aaagcttttt gtttagaatg gatcaacaat
      421 attgattttc atgcctatga cgactgaacc tattagcttg tcgttagtgc aattttagca
      481 cattggaagg tggaaatgtc gcgtatttca ctgctatcct gaccagagaa tcgatatgta
      541 tctttaaagt catttacata tggaatgtat gatagaaatt tacactgtgt ataatgtact
      601 gtttcaacta tagaaccatc acctgctaaa agatctatag atacgtcaaa caatggataa
      661 tcagaatttg ttgttgctat gttcagatat tgattaacat agctatagta actttgttta
      721 tccttggtag gtattgattc taaataaaat gatggaggtc caccagtatt tgtagatggt
      781 gctgttggac ccccttctgt cattccaaac atacctaact ttgaaaaagt gttaaaggta
      841 atagtattgg tagatgtagt aaaatgaact acaagtgatt gagccattgt attaggagat
      901 aggtttgagt tggttgcagt tacagttgta gttggtattg gatttggtat ttgattaggg
      961 atttgaatta ttccttgggt aattagatat tgcagacctt taacgtactc tgtgtcggta
     1021 atgtttcctt ccgaccacca cttggcgtta cttcttatcc attgtggaat aacaatctgt
     1081 tgagctgaag cttcaaaaga tacagtggca accgctagaa ttccgataat cagagatagg
     1141 aaaataattt tgcttaattt cactagctcc attttcgata aaatctacat aaatgttgtg
     1201 tatgattata cctacatatt taaaattgat aatttttcgt tgcaatcttg tttttgctat
     1261 tttgtaatca atttcattac ttcatttagt gtaggtggaa ttccctgagt attaccaaca
     1321 taaagtgatg ccgcaccatt tgcaaagagt aatcgctcat gtgtatctag atttgctaaa
     1381 tatccaacaa tgtttgcagc atcccataca tcacctgccc cagtaacaaa gttaggttta
     1441 acagaaaagg actgaacaaa atcaacatct tttccatttg accaacatgc tcccgtggag
     1501 gtatgaagat caataggaat tgaggctttt tttgataggt ttagaagtga ttttttagtt
     1561 tcctttatac caggtttgca ttctaaacca tattgttttt gcaagatatt acactcattt
     1621 tcgttaacac ataacgaatc caataatggg ccaatctttc taatggcctc tttgaactca
     1681 cttgcccttg tctgtatatc tgcaggatcc aaaaaatgca acgaatctgg cgatttttca
     1741 aatacaaatt tacaaagttc tgttcctttt tcattacttg cccagtttgc aaccatgaca
     1801 gcacttgatc ttttgattgc ttcttgttcc tttgtaccta gtttctctgg tccaaaattt
     1861 tcattatcac ccaagtctga tagcattata tttacaattt tattttcatt aagaaactca
     1921 agcgatgtag ttctaccagg ttttccatcg attacaaata aagaagcatg ttgaaattct
     1981 gagaatgttt ccttaaggag aattgtactt gctttatctg caacagtaat cagtgttact
     2041 ggacatccaa gcctagcaag agcatatgca acatttgtgg catttcctcc cttgatgtct
     2101 ttttgagata tgccacgaat gcttccacca aattcgcttt tttctattat ttgttgatag
     2161 actttattga catttgaaat tttgacaatt ctgtccagaa agaaatcatt taaaacaact
     2221 actgatcttg tgtgctttag attttgtagt ttttctaaca tgaaaatggt ttagcccatt
     2281 ggaggcattg gcggacctct tgctccgcca cctttaccac cagatgatgc aattacatca
     2341 tctattctga ggatcatgca tgctgcctct gttgcagatt ttattatctg ctcttttact
     2401 gcagctggtt cgatgatatc ctgagtatac atgtcagcca ctctagtgtt tcttgcatct
     2461 attcctgtcc atttctttcc ttggctttgt tttgctcgta gtgttaccat cgtattgatt
     2521 ggatccattc cagcgttttc cgctattgtt aatgggatta tctcaagtgc ttcggcgtac
     2581 tttttaattg caagttgttc ccttccctcg aacctatctg cccagtcttt tagttgtgat
     2641 gcaagatatt cttctggtgc accgcctcca gcaactactg ctggtttttc gattacatct
     2701 tttacaacca tcaatgaatc atgaagtgat ctatcaacct catctactac tctttgagac
     2761 ccacctctta tcaatactgt aatagctctt gggtttttac agccttcaac gaaaacccat
     2821 ttttctgtct cgacctttcg ttgttcaact agttctgcag tgccaaggtc ctttgaagtc
     2881 atatcatcaa tgttactgct aattcttcct ccacaagctt tagcaagctt tgtcatgtcg
     2941 ctttctttta ctcttcttac tgacaagatt ccttgtttgg caagatagtg ttgagcaata
     3001 tcgtctattc ctttctggca gatcaagaca ttggcgccaa tttcgtggat cttgtctacc
     3061 atagctttta gcattctatt ttcttcttca aggaacattt gcatctgagt ggggtcgcta
     3121 attcttatct ctgcactcat ctcagttttt tctatctcaa gtgcagagtt gagaagtgca
     3181 atctttgcct tttctatttt tgttggcatt ccgctgtgga caacttcctt gtcaaggata
     3241 atgcctttga tgagttttgt atttctaata gagccacccg ccttcttttc aactttgata
     3301 ttgtccagat ctactttatg tccctcaact tctttttcga ctacttgtaa aatagcatct
     3361 acgacaagtt tagaaagcat atcactgtct tctgagacca gttttgattc catgctggtc
     3421 ttggcaactt tgataagaac gtctttctcg cttgggctaa taggttttgc aagctcttgc
     3481 agaagagaga gggctttctc agctgctgcc tgaaatcctt caataattac tgtagcatga
     3541 acatcttttt ctaatagttc ttctgctttt gccagaagcg aaccagcaaa aacaacagat
     3601 gatgtggtac cgtctccaac ttcgttgtca acagtctttg aaatctctac catcatttta
     3661 gcagcaggat gctgaacatc gatctctttt agaatcgtag caccgtcgtt agtaattgta
     3721 acatcgccta atgaatcgac aagcatctta tccattcctc gtggaccaag gcttgttctt
     3781 acaagttcag ttactagttt tgccgctgca atattgtttt tttgagcatc tcgtcctttt
     3841 tgttgcagcg cgctctcttt tagtacaagg accggacctt gtggtgtctg ttgaattgaa
     3901 gccaaaatta ttccctgagt tcgtattttt gctacccctt ttaatacctt attgattgaa
     3961 gatcttcagg taagttctat tttttacatc aacaattcca ttatacaaaa tccttacctc
     4021 aggtagtgca agaaaaggaa ggaagattgg aatcaagtga ggttgtttga atttgcaacc
     4081 agcatcaatt atttttgaat caatatcaga atattgtttt gtagcctctt caagtggcaa
     4141 ttttgatatt aaacctccta cagtcatatc aaatttacaa agaatattac cgtcctttac
     4201 agcaagcatg ccgccttgac ttttggtcaa ttggtttgct acaacggcca tgtccttctc
     4261 atttgatcct atgacaatca tatcattttc atgaaagctt tgcgtgctgc caaatgcacc
     4321 tatgcgggct c
//
LOCUS       DASPUS010000228         3303 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_117369, whole genome shotgun sequence.
ACCESSION   DASPUS010000228 DASPUS010000000
VERSION     DASPUS010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3303)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3303
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117369"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..479)
                     /gene="cobA"
                     /locus_tag="VEJ68_05310"
     CDS             complement(<1..479)
                     /gene="cobA"
                     /locus_tag="VEJ68_05310"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010193611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HXX06225.1"
                     /translation="MKGKVFIVGAGPGDPKLITMKAVEVIKDADIVLYDRLVSKKIIA
                     MIPKKTERVYVGRNVGDDYKHQDVTNQLMVQYAKKRKNVVRLKGGDPFIFGRGGEEAE
                     FLKDNKIKYEIIPGITSGIGSAEYSGIPLTHRDYASSVAFVTGHEDAKKSTETVNWK"
     gene            complement(476..1411)
                     /gene="hemC"
                     /locus_tag="VEJ68_05315"
     CDS             complement(476..1411)
                     /gene="hemC"
                     /locus_tag="VEJ68_05315"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HXX06226.1"
                     /translation="MKYLVGTRGSKLSLAQTNWVIAELTKNSPHAEFEIVAIKTKGDT
                     DARPLFTINQKGIFEKEIDRAVAERTVDFAVHSLKDVPADLPEELVLACIPKRESPND
                     VFISKDGSTLNSIKKGAVIGTSSLRRAVQITRIRPDVVVKPIRGNIETRIKKVDDGNF
                     DAIVLAEAGIGRLGLDIKFEKLSLSSFPPSPGQGALAIVSRRDNLELINILKKIEDPN
                     SRNIVEAERSLSLFVDSGCRFPVGALAEQKGNRLTLTVTVYSIDGTKSIMVKKDSEST
                     QAKELGRLAASELSTKGIQELAKDWREKVEEWNKI"
     gene            complement(1408..2685)
                     /gene="hemL"
                     /locus_tag="VEJ68_05320"
     CDS             complement(1408..2685)
                     /gene="hemL"
                     /locus_tag="VEJ68_05320"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HXX06227.1"
                     /translation="MSNSKKLFVRAKKVIPSGINSPVRYYPPYPFFVKKAEGSSLWDV
                     DGNHYLDFCNGYGALLLGHKRKEILSNVKSQLKSGTLYCAPTELEVELSELISKNYNS
                     MQKVRLVNTGSEATMTAIRLARGFTKKKKIIKFEGCYHGAYDYVLVKAGSGAANMSIP
                     VSEGGLDEVSKNTLVVQYNNSQELDSVLESEQDVAAVIIEPVLANMGLVLPEKNFLNE
                     VRKITSDHNVVLIFDEVVTGFRMSTGGAQKYYSIKPDITTLGKALGNGFVIAAVGGRN
                     DIMNMLSPEGNVYQASTYAGNPVSVSAAIASIKTMNKNKTNLYPRLEKSCKKLTSAIK
                     DIASDMKIPHQINSISSMFQIFFTETAVRDYSSAKAADPIKFKKLFQELLKNGVFVAP
                     SQFETVFLSDAHDKKDIQKTILAYEKALKTVKK"
     gene            complement(2752..>3303)
                     /locus_tag="VEJ68_05325"
     CDS             complement(2752..>3303)
                     /locus_tag="VEJ68_05325"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HXX06228.1"
                     /translation="TNATAFETPMVLGQATATGIIDSSPMITNNSTGLFHIGTTIIQW
                     KAVDKFGNIQTSDQTVNVLACGKPMSYYNLMMGTNSNDTLTGSLVSNLIIGLGGNDII
                     RAGPTGDCIIAGDGNNIIFGGNGNDVIISGNGDNIIKGGSGNEQIYVGTGSNIIQGGT
                     GHDTCYLGDPSKDTVVDCQALKR"
BASE COUNT          901 a          673 c          548 g         1181 t
ORIGIN      
        1 cttttccagt ttacagtctc tgttgacttt tttgcatctt catgacctgt gacaaatgca
       61 acagaagaag cataatctct gtgagttaac ggtattcccg aatattctgc agaaccaatt
      121 cctgatgtga ttccaggtat tatttcatat ttgatcttat tatccttgag aaattctgct
      181 tcttctccac ctcgaccaaa aataaatgga tctccaccct ttagcctaac aacatttttt
      241 ctcttttttg catactgtac catcagttga tttgtgacat cttggtgctt gtaatcatcc
      301 cctacatttc ttccaacata gactcgttca gttttttttg gaatcatagc tattatcttc
      361 ttactaacaa gcctatcgta gagtacaatg tctgcatctt tgatgacttc aacagccttc
      421 atggtgatca gttttgggtc acctggacct gcgcccacta tgaagacttt tcctttcata
      481 ttttgttcca ttcctctacc ttttctctcc agtcttttgc aagctcttgt attccttttg
      541 ttgagagttc agatgcagcc agtctgccaa gttctttggc ctgagttgat tcagagtctt
      601 tttttaccat tatagatttg gtgccatcta tagaataaac agttacagta agagtcaatc
      661 tatttccttt ctgttcagca agcgcaccta ctggaaatcg gcaacccgaa tcaacaaata
      721 atgacaatga tctttctgcc tccacaatgt ttcttgagtt tggatcttca atctttttta
      781 gaatattaat taattcaaga ttatcccgtc tggatacgat ggccagagca ccttgaccag
      841 gagatggtgg aaaactagaa agtgaaagtt tttcaaattt tatatcaagt cctagcctac
      901 caattcctgc ttctgcaaga acaatagcat caaaatttcc atcatcaact tttttgatcc
      961 tggtttcaat attgccacga atcggtttga ctacaacatc aggccttatt cttgttatct
     1021 gcactgctcg tcgtagactg cttgtaccaa ttactgctcc tttttttatt gaattcagtg
     1081 tggacccatc ttttgaaatg aaaacatcat taggagattc tctttttgga atgcatgcaa
     1141 gtacaagttc ttctggtaga tctgcaggaa cgtcctttag gctatggact gcaaaatcca
     1201 cggttctctc agctactgct ctatcaatct ctttttcaaa tatgcctttt tggttgatcg
     1261 taaaaagtgg tcttgcatca gtatctcctt ttgttttgat tgcaactatc tcaaattctg
     1321 catgtggtga gttctttgtt aattctgcaa ttacccaatt agtttgtgca agagagagtt
     1381 tacttcctct tgttcccacc agatatttca ttttttcacc gttttcaatg ccttttcata
     1441 tgctagaatg gtcttttgaa tatctttttt gtcatgtgca tcagaaagaa aaactgtttc
     1501 aaattgcgag ggtgcaacaa agacgccatt tttaagtaat tcttggaata gttttttgaa
     1561 ttttattggg tcagctgctt ttgctgatga ataatcacgc acggctgttt ctgtgaaaaa
     1621 gatttgaaac atagagctta tcgagtttat ctgatgtgga attttcatat ctgaagcaat
     1681 atcctttatt gcagatgtta gttttttaca tgatttttca agccttggat agagattagt
     1741 tttatttttg ttcattgttt tgatagatgc aatcgctgca gacacggaaa caggattacc
     1801 cgcataggtg cttgcctgat atacatttcc ttctggtgac aacatattca tgatatcatt
     1861 tcttccccct actgctgcga tcacaaatcc atttcccaat gctttgccga gtgttgtaat
     1921 atcaggtttt attgagtaat atttctgtgc ccctcctgtt gacattctaa aaccagtaac
     1981 tacctcatca aatattagaa caacgttatg atcagatgta atctttctta cctcatttag
     2041 aaagtttttt tcgggtaaaa caaggcccat atttgcaaga acaggttcta taattaccgc
     2101 tgcaacatct tgttcggatt ctaaaacaga gtcaagttcc tgagaattat tatattgtac
     2161 aacaagtgtg tttttagaaa cttcatcaag gccaccttcg gagacaggta tgctcatatt
     2221 tgctgccccc gagcctgcct ttaccagaac atagtcataa gctccatgat aacatccttc
     2281 aaattttata atttttttct tttttgtaaa acctcgtgct aatcttatag cagtcatagt
     2341 agcttcactg cctgtgttta ctaatcgcac cttttgcata gaattatagt tctttgagat
     2401 tagttctgat agttctactt caagttctgt tggagcacag taaagagtac cactttttag
     2461 ttgtgatttg acatttgaaa gaatctcctt tctcttgtgg cctaaaagta atgcgccata
     2521 accattacaa aagtcaagat aatgatttcc atcaacatcc caaagagacg aaccttctgc
     2581 ctttttaaca aagaatggat aaggtggata gtaacgtaca ggactattaa ttccagatgg
     2641 aattactttt tttgctcgca caaatagttt tttcgagttt gacattcacc ataaaaaaga
     2701 tagattgtca ttataatcta tatgaaaaga tttaagcaat caagataatt ttcaacgctt
     2761 aagagcctga caatcaacta ctgtgtcctt gcttggatca cctaggtaac atgtatcatg
     2821 tcctgttcca ccttgaatta tgttagaacc tgtaccaaca tagatctgtt cgtttcctga
     2881 accacctttg ataatattat caccattgcc agatatgata acatcatttc catttcctcc
     2941 aaatattatg ttgtttccat ctcctgcaat tatgcagtca cctgttgggc ctgcacgaat
     3001 aatgtcattt cctccaaggc caataatcaa attggatacc aatgagcctg ttagagtatc
     3061 attactgtta gttcccatca tcaaattata gtatgacata ggcttaccac aagcaaggac
     3121 gttaactgtc tgatcagaag tctgtatgtt tccaaatttg tcaacagctt tccattgaat
     3181 tatggttgta ccaatgtgga ataaaccagt agaattattg gttatcattg gtgatgaatc
     3241 aatgattcct gttgcagtag cttggcctag taccattggt gtttcaaagg ctgttgcatt
     3301 cgt
//
LOCUS       DASPUS010000229         7772 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_2040150, whole genome shotgun sequence.
ACCESSION   DASPUS010000229 DASPUS010000000
VERSION     DASPUS010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 7772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7772)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7772
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2040150"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1386
                     /locus_tag="VEJ68_05330"
     CDS             <1..1386
                     /locus_tag="VEJ68_05330"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008301088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HXX06229.1"
                     /translation="YKWTQLFGEFGLVLDGLASPFAIIIYVISTVVVLFSKPYMVAKI
                     TAQYEEKMNGQKQVIGDGPTAMVESSAMKNYVNNQIGIYFALYLVMAMGMLGSVLATN
                     LIEFYVFFEVMLIPGFFILALWGYEAKRRVALLFFFWTHVGAVILLLGFLAIGLNVGS
                     FNYSDIQERGIPHNILTLAAVGIIIGLGVKMAAFVVHIWLPHTYRAAPTPLNALSSGA
                     MLGVGAYGFFRLLATLLPGEYSHFALFLNIWGLGTMLYGGVMALTQDDIKKFFAYSSI
                     SQMGYILFGIGSASVLGLSGSEMMFVSHSIGKVILFMMVGAIILQVRTRSITKMGGLA
                     GKMPITATCAMIGVLTIMGVPPTSGFMAEWTMFNGALQTAIQEGSTIRMVSFALGLIA
                     TVITMAYSLWMIKRVFFGKLPEHLENTKEANWYVTGPMMVLAGFTIVIGIYPDIFFNQ
                     IIPYMKGLVGV"
     gene            1390..3468
                     /locus_tag="VEJ68_05335"
     CDS             1390..3468
                     /locus_tag="VEJ68_05335"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008301127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HXX06230.1"
                     /translation="MAFGSLDFSIGALNVWAIWLLPFIGALIIPAAAKFSKNSSGYIA
                     VAFALASAVSAITLLPLALHNQEIHNQIPWISSIGLKAGILADPLAAIMTNVVGWISF
                     LIFVYSLGYMKGDKDLMRFFFWMSFFVGSMQLIVLSDNFLQLFFGWEGVGLASYALVG
                     FWYRDKKKDHVGQEGRTVLGLLDYYSPTQAGMKAFIMTKVGDIMMLAGMFLIFAFAGT
                     FGFRELTANTSWATAMSAHNLLIPAAVLLFGGAIGKSAQFPLNEWLLEAMTGPTSVSA
                     LIHAATMVKAGVFLVARLAPLFFALAAAGINMDQFFEVIAFVGAITAFLLATQGMVHP
                     EIKKVLAYSTGSQIGYMMMALGVAGLSRQFVDGYTAGFFHLISHAMFKASLFMAAGSL
                     LHIVGSRFMTDMGGLRKLMPKTYAFMWAAGLGLMGAPFITTGFWSKDAIFGAVYQSGN
                     TWALPLFIMAVLTAVITAFYTTRMIGMVFFGNKSKHVEHLEKDGYHIHEASPVMWIPY
                     GILAALTIGVGVLGLTFEHKIHNIFTDYLSTTFGIQSQIGAVATESQQLLGGFLEGVN
                     PIALIASLSAFAIGFVLGYIFYIGRFADPVKFVNSNIVFYAIHKFFLNRWYLDALINW
                     TFVVGPLYLARGLYRYFENRVFEGFNLVPEKTMAGGARILQSTQTGISQSYLYVFGAG
                     ILIVVLLLLI"
     gene            3477..4964
                     /locus_tag="VEJ68_05340"
     CDS             3477..4964
                     /locus_tag="VEJ68_05340"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HXX06231.1"
                     /translation="MIDFTSTPIILTLMLGAVGVIIPVISVIRKEQGTSLYGGIAFGA
                     LVAAIAFVVYQIASKHVISSAIFSKDVLSNDMFGSFFAIAMLIVGIMTTVGSFNYMRG
                     RSNPAVYYSLIVLSSIGMVLIAYSTDLVMLFVAWELMSIPTYVLAGFNKKDPSSNEAA
                     IKYFLFGALSSGIIIWGISIAYGITGSTNIEQVIAGFSKLGPDMMPLAILAVGMFIAG
                     FGFKIGLVPFHMWLPDTYEGAPPPISALLAAGTKKAGFAAALRVIIMGSIALNLNWAF
                     ALAIIAIVTMTVGNLAAIRQKNLPRMLAYSSIGHAGYILIGLSIAPFSAIGIAASLFH
                     ILNHAVMKAAAFIAVAGIITTLGVSHIDKIRGLGKRMPITSLGLVISLLALAGVPPLN
                     GFWSKLMLFGSAINAGSSMSWAPYLAVAGVLNSALSLAYYGWIIRKMYFEEGESEKRV
                     KEPKSVVAVMIFSIIFMVGIGVYPDPFIEFAKSAVPVLTNLSTIH"
     gene            complement(4954..5805)
                     /locus_tag="VEJ68_05345"
     CDS             complement(4954..5805)
                     /locus_tag="VEJ68_05345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HXX06232.1"
                     /translation="MDRKNFEINPLIKDFKISIDRINDALKRELELYSASEFFEPLHY
                     ALEGGKRIRPLILTLSAESVGNCDENAYIAACAVELLHTESVIHDDIIDNEILRRRKD
                     PFHIKYGYNTSIITGDFVLGLILNISSRLDNPRISRELANTAMMMSDGEMIETRLETS
                     EDITFDDYLKVIEYKTATAFEAASKIGAILGGGNEEQIMALAEYGKNMGIAYQIRDDL
                     QDWNNEDKLFNILIKKSSDPRNVFDHMDMLLNNYSKKAKIALRKIEDSPSRTRLESLL
                     DLTMLNV"
     gene            complement(5858..5949)
                     /locus_tag="VEJ68_05350"
     tRNA            complement(join(5858..5871,5889..5949))
                     /locus_tag="VEJ68_05350"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5911..5913),aa:Glu,seq:ttc)
     gene            6033..6671
                     /locus_tag="VEJ68_05355"
     CDS             6033..6671
                     /locus_tag="VEJ68_05355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing redox enzyme family protein"
                     /protein_id="HXX06233.1"
                     /translation="MNSLVQQIDDIIEEQSLLKHKFYLMWNEGKLSRDSLSGYSKEYF
                     QLVKSVPSFVEAILKKSPNNLRSSIEMNQQEEYEHITPWTKFAGSLGISKDTLEVYNG
                     LDKTREAVSNLSALMNSFEDGAAAMYALEQEIPKISLSKIDGLRRFYGISDDDAIEYF
                     RIHTEADIRHAALWRKILENVSANKEKELVQIANKSLSAQNLLLDSCYEAYC"
     gene            6714..6787
                     /locus_tag="VEJ68_05360"
     tRNA            6714..6787
                     /locus_tag="VEJ68_05360"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6748..6750,aa:Ile,seq:cat)
     gene            7101..7664
                     /locus_tag="VEJ68_05365"
     CDS             7101..7664
                     /locus_tag="VEJ68_05365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TATA-box-binding protein"
                     /protein_id="HXX06234.1"
                     /translation="MPQTKPIVSIENVVASASVDQRIDLNVITQIFPDVEYHPDQFPG
                     LVFRLKSPKTATLIFSSGKMVCTGAKSEEQAIKAVRSVVQKLRKGGIKIKKDAVIVIQ
                     NIVASASLGGKIHLEQAARSLPRSMYEPEQFPGLIHRMLDPKTVILLFASGKLVCTGA
                     KKESEVYRAVHNLHTLLEEKELMIYES"
BASE COUNT         2294 a         1419 c         1536 g         2523 t
ORIGIN      
        1 tataaatgga ctcaactatt tggcgaattt ggattggtat tagatggtct tgcttcacca
       61 tttgcaataa taatatacgt aatttctaca gtagtggttc tattttcaaa accatacatg
      121 gttgccaaga ttacggcaca atatgaagaa aaaatgaatg gacaaaaaca agtgattggt
      181 gatggtccaa cggcaatggt ggaatcatca gccatgaaaa attatgtgaa taatcagatt
      241 ggaatctatt ttgcactcta tcttgtcatg gcgatgggaa tgttaggttc tgtgcttgca
      301 actaatctga tagaatttta tgtcttcttc gaagttatgc tgattcctgg cttctttata
      361 cttgcattat ggggttatga ggcaaaaagg agagttgcat tactcttctt cttctggact
      421 catgtagggg cagtaattct ccttcttggt tttcttgcaa taggactcaa tgttggcagc
      481 ttcaactatt ctgatattca ggaacgtgga ataccacata acattctcac acttgcggca
      541 gttggaataa tcatcggact tggagtaaag atggctgcat ttgtggtaca catttggtta
      601 ccgcatacat atcgtgctgc cccaactcca ttaaacgcac tctcatctgg agcaatgtta
      661 ggtgtaggag cttacggttt cttcagatta ttggcaacac ttttgccagg tgagtatagt
      721 cactttgcac tctttctgaa catatgggga ttaggaacta tgctctatgg tggcgtgatg
      781 gcacttacac aagatgatat caagaaattt tttgcatatt caagtattag tcagatgggt
      841 tacattttat ttggaattgg ttctgcttct gttcttgggc tttcaggttc tgagatgatg
      901 tttgtatcgc atagcatagg aaaagtcatt cttttcatga tggtaggtgc tatcattctt
      961 caagtccgta ccagaagtat taccaagatg ggaggactag cgggcaaaat gccaatcaca
     1021 gcaacatgtg ctatgattgg tgtacttaca attatgggtg tacctccaac cagtggattt
     1081 atggcagaat ggacaatgtt caacggtgca ttacagacag caattcaaga aggatcaaca
     1141 attagaatgg tttcatttgc tcttggatta attgcgacag ttattaccat ggcttattct
     1201 ctgtggatga taaaaagagt cttctttgga aaacttccag aacatcttga aaatacaaaa
     1261 gaagcaaatt ggtacgtaac cggacccatg atggtattag caggttttac aatagtgatt
     1321 ggaatatatc ctgacatatt cttcaatcaa ataattccat acatgaaagg attggtagga
     1381 gtttaaacaa tggcttttgg atctcttgat tttagcattg gcgcattgaa cgtttgggca
     1441 atttggttat tgccttttat tggagcatta ataatacccg ccgcagctaa attttcaaaa
     1501 aattcttcag gatacatagc agttgctttt gctcttgcaa gtgcagtttc agctataaca
     1561 cttctaccac tagcactaca taaccaagaa attcataacc agatcccctg gatatcttca
     1621 attggactaa aggccggaat cttggctgat ccgttagctg ctataatgac taacgtggtg
     1681 ggatggatat catttctgat ttttgtttac agtttgggtt acatgaaggg cgacaaagat
     1741 ctgatgagat tcttcttctg gatgtcattt tttgtcggct ctatgcaatt aattgtgtta
     1801 tctgataact ttctccagct tttctttggt tgggaaggcg taggtcttgc atcatacgca
     1861 ctagttggat tttggtatag agacaaaaag aaagatcatg taggacaaga aggtcgtaca
     1921 gttcttggtt tgttagatta ttattcgcca actcaagcag gaatgaaggc attcatcatg
     1981 accaaagttg gagacatcat gatgttagct gggatgtttc ttatctttgc atttgctggc
     2041 acatttggat ttagagagtt gactgcaaat acaagttggg caaccgcaat gtcagctcat
     2101 aatctgttga ttcctgcagc agttttattg tttggaggag ctattggtaa atctgctcaa
     2161 ttcccactca acgaatggtt acttgaggcg atgactggtc ctacatctgt ttctgcactc
     2221 attcacgcag ctacaatggt aaaggcaggt gtatttttag ttgcaagact tgctccatta
     2281 ttctttgcgt tagctgcagc tggcataaac atggatcaat tttttgaagt aatagcattt
     2341 gttggtgcaa tcacagcatt tttgttagct acacaaggaa tggttcatcc cgaaataaaa
     2401 aaagtgcttg catattcaac cggttcacaa attggttaca tgatgatggc tcttggagtt
     2461 gctggacttt cacggcaatt cgttgatggt tatacagctg ggttcttcca cttaatttca
     2521 catgcaatgt tcaaagcttc attgttcatg gcagctggtt cgttattgca tatcgtagga
     2581 tctagattta tgactgacat gggaggtcta cgaaaactta tgccaaagac atatgctttc
     2641 atgtgggcag cgggacttgg attaatgggt gctccattta ttacaacagg tttctggagc
     2701 aaggatgcaa tttttggagc tgtctatcag tcgggtaata catgggctct tccattattc
     2761 atcatggcag tacttaccgc tgttataact gcattctata ccactagaat gattggaatg
     2821 gtcttctttg gtaacaagag taaacatgta gaacatttag agaaggatgg ttatcacatc
     2881 catgaagcaa gtccggtaat gtggattccg tatggaattc tagcagcact tactatagga
     2941 gttggtgttc ttggtttaac atttgaacac aaaatacaca acattttcac agattatctg
     3001 tctacaactt ttggaatcca atcacaaatt ggagccgttg ccaccgaatc tcagcaatta
     3061 ctaggtgggt tcttggaagg cgttaatccg attgcactca tagcttccct ttctgcattt
     3121 gcaattggat ttgtattagg atatattttc tacattggac gatttgcaga tcctgtcaaa
     3181 ttcgtaaact caaacatcgt cttttatgca atacacaagt ttttccttaa caggtggtat
     3241 ctagacgcac ttatcaattg gacatttgtt gtaggtccat tgtatctcgc acgaggattg
     3301 tatcgatact ttgaaaatag agtcttcgaa ggattcaatc tcgtaccaga gaaaacaatg
     3361 gcaggtggtg caagaatatt acaatcaact caaacgggaa tatctcaatc ttatctgtat
     3421 gtatttggcg ctggtatttt gatagtagtt ttacttttgt taatttaggt gaaaaaatga
     3481 tagactttac ctccactcca ataattctaa ctttgatgct gggtgcagta ggtgtaatta
     3541 taccagtgat aagtgtaata agaaaagaac aaggtacatc tctttatggt ggaattgcat
     3601 ttggcgcgct tgttgcagca attgcatttg tcgtatatca aatagcttcc aaacatgtca
     3661 tatcatctgc aattttctcc aaagacgttc tctcaaatga tatgtttggt tctttctttg
     3721 caattgcaat gttgattgtt ggtataatga caacagttgg ttcattcaac tatatgcgag
     3781 gaagatcaaa ccccgctgtc tattattctc tgatagtctt gtcatcgata ggaatggtat
     3841 tgattgccta ttctaccgac ttggtgatgc tgtttgttgc ttgggaatta atgagtattc
     3901 caacttatgt tcttgctggt tttaataaaa aagatccatc gtctaatgaa gctgccatca
     3961 aatacttttt gtttggcgca ttatcttccg gaataatcat ttggggaatt tccattgcct
     4021 atggtataac aggatcaaca aacattgaac aagtaatagc cggattttca aaacttggtc
     4081 ctgacatgat gccattggct attcttgctg ttggaatgtt cattgctgga tttggattta
     4141 agattggtct agttccattc catatgtggc ttccagatac ctatgaaggt gcacctccac
     4201 caatctccgc attgttagca gcaggcacaa agaaagccgg attcgctgca gccttgcgtg
     4261 taataataat gggctcaatt gcccttaatc tcaactgggc atttgctctt gctattattg
     4321 ccattgtcac tatgactgtt ggaaacctag ctgcaataag acagaaaaat cttccaagaa
     4381 tgcttgcata ttccagcatc ggtcatgcag gatacatcct gattggtttg agtattgcac
     4441 cattttctgc aattggtatt gcggcttcat tgtttcatat tttaaatcat gcagtaatga
     4501 aagcagctgc attcatcgct gtggcaggaa ttattacaac tttaggagta tctcatatcg
     4561 ataaaattcg tggacttggt aaaagaatgc cgattacatc actaggactg gtaatatcct
     4621 tgttggctct ggctggagtt ccacccctaa atggattttg gagtaagcta atgttatttg
     4681 gatctgcaat caatgctggt tcttccatgt catgggctcc atacctagca gtagctggag
     4741 ttcttaatag tgcactttcg cttgcatatt atggttggat aattcgtaag atgtactttg
     4801 aagaaggcga atctgaaaag agagtaaaag aaccaaagtc agttgttgct gtcatgatat
     4861 tttcaataat cttcatggtt ggaataggag tatatccaga tccatttatt gaatttgcaa
     4921 aatctgctgt tccagtacta acaaatcttt caactataca ttaagcattg taaggtctaa
     4981 caaactttca agtctagttc tcgatggact atcctcaatc tttctaagtg caatttttgc
     5041 ttttttagaa taattgttca gaagcatatc catgtgatca aaaacattgc gtggatcaga
     5101 acttttctta atcagaatat taaacaattt atcttcatta ttccaatctt gcaaatcatc
     5161 acgaatctga tatgcaattc ccatattctt accatattcg gcaagggcca ttatctgttc
     5221 ctcattacct cctccaagta tggcgccaat ctttgatgca gcttcaaatg ccgttgctgt
     5281 tttgtattcg atgaccttca aataatcatc aaaagtgatg tcctcactag tctctagtct
     5341 agtctcaatc atctctccat cactcatcat catagccgta ttggcaagtt cccttgatat
     5401 tcttggattg tctaggcgtg aggatatgtt aagaattaat cctagaacaa aatccccagt
     5461 aataatactc gtattatatc catatttgat atgaaatgga tcctttcttc tccttagaat
     5521 ttcgttatca attatatcat catgtattac ggactctgta tgtagcagtt caacagcaca
     5581 ggctgcaatg tatgcatttt catcacaatt tccaacactc tcagctgata aagtaagaat
     5641 tagtggtcta attcttttac cgccctccaa tgcataatga agaggttcga agaactcaga
     5701 agcagaatat agttcaagtt ctcgtttcag tgcatcattt attctatcga tagagatctt
     5761 aaagtccttg atgagcggat tgatctcaaa attctttcta tccaaaaatt tgcactagtg
     5821 agcgtaacta acagtatgaa tttaatgctt ttgtaggtgc tccagccggg attttcatca
     5881 atttggattt tgaacccggg tcgtgggatt gaaagtccca catgcttgac cggtctacac
     5941 cactggagcc cgacctgcct cctgtttact atccataaaa tccttttgaa gtcattcaaa
     6001 agattttttt attgcctaat tcgataaatc gcatgaattc tcttgtgcaa caaatcgacg
     6061 atattattga agaacaaagt ttgctaaaac ataaattcta tctaatgtgg aacgagggaa
     6121 aattatctcg tgattctctt agtgggtatt caaaggaata ctttcagttg gttaaatctg
     6181 taccatcttt tgtagaggct atcttgaaaa aaagtccaaa taacctaaga agctcaattg
     6241 agatgaacca acaagaagaa tatgaacata taacaccatg gaccaaattt gctggttcct
     6301 tgggtatatc aaaagacaca ctcgaagtct ataatggtct tgataagact agagaagcag
     6361 tttctaatct ttcagcacta atgaattctt ttgaagatgg ggctgctgcc atgtatgctc
     6421 ttgaacaaga aatcccaaaa attagcctct caaagataga tggtttaaga cgattctatg
     6481 gaatctcaga cgatgatgca atagagtatt tcaggataca cactgaggct gatatacgac
     6541 atgctgctct ctggaggaaa atccttgaga atgtttcggc aaataaagag aaggaactag
     6601 ttcaaattgc taacaaatct ttgtctgccc agaatctctt gttagacagc tgttacgagg
     6661 catattgtta actctatacc attttatact gcattccaaa ttgttttttc gttgggccca
     6721 taactcagct tggtagagta accggctcat aaccggtgag ccaagggatc gaagcccttt
     6781 gggcccatca ctaaaatttt actaaaaata tgattaatac atcaaatcgt catattacaa
     6841 gaataaaaaa ttggttgatt gttctactgc tttcatagta attcaaacca tccacctcaa
     6901 caataaaacc aattttaaaa taagctgata cctatcttga tttggccgca atgaggaatc
     6961 agagttatgg ctgaaattgt gatgtgaagg catttgtctg agctgccaaa aatcttattt
     7021 gagatctgag aaatttgaca agatgaatat caacataaaa cagtacagag tatatataaa
     7081 gcccatatat aaagaccgaa atgcctcaaa caaaaccaat tgtcagtatc gaaaatgttg
     7141 tagcttcagc ttcagttgat caacgaattg atcttaatgt catcacacaa atttttcctg
     7201 acgttgaata tcatcctgat caattccctg gtttagtttt cagattaaaa tctccaaaaa
     7261 cggcaacact aatctttagt tcaggaaaaa tggtttgtac tggagcaaaa tctgaagaac
     7321 aagcaattaa ggcagttcgt agtgtagttc aaaaattaag aaaaggtgga attaaaataa
     7381 aaaaagatgc tgttattgta atccagaaca tagtggcatc agccagtctt ggtggcaaaa
     7441 tacatctaga acaagctgcg agaagtcttc ctcgaagtat gtatgaacca gaacaatttc
     7501 ctggccttat acatagaatg cttgatccaa agacggtgat cctacttttt gcatctggca
     7561 aactagtatg tacaggtgca aagaaagaat ctgaggttta tagggccgta cacaatctgc
     7621 ataccctatt agaagaaaaa gaactcatga tatatgaaag ctgattccgt aaccttttcg
     7681 gctttagaca tactcatttg tttttgatgc gctgaaaagt ttgactgtcg agtaattttg
     7741 catcatgtaa cgtgctagaa atcgtaatta tg
//
LOCUS       DASPUS010000230         2534 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_262209, whole genome shotgun sequence.
ACCESSION   DASPUS010000230 DASPUS010000000
VERSION     DASPUS010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2534)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_262209"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            125..589
                     /locus_tag="VEJ68_05370"
     CDS             125..589
                     /locus_tag="VEJ68_05370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06235.1"
                     /translation="MKQFKNSFVIDSDIDTVWKFYTDIKHLQIITPKHMSLQILKSQH
                     DILQQGTEVWLSAKLVMTSKWHSKIIHLKPYEYLDEMITGRFKMWKHLHKFNIIYQKK
                     TQVVDEIYFELPHGCVGKLFENHVLKQLRNIFTYREKTTIEYLKSQSTNLTR"
     gene            complement(570..1229)
                     /locus_tag="VEJ68_05375"
     CDS             complement(570..1229)
                     /locus_tag="VEJ68_05375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06236.1"
                     /translation="MDIEKFTDDVYTVAEKLAEGKESDMKARINFVRERLIELYQKNL
                     VKINHSVLEMICASNLIAQGYVVDIEKHLSDILVCDVFATKGDGTFIMEIETGFTPPD
                     HALDTIDYYVARIASKISRYSQHCSKFALATPVVGILPIPKLFLKPPSKRTKEEVKKI
                     KDLCDRFYKNPPIETSEILNARLHSVYLINIDKCFAKQLDPYTYLDLTNDLQEASELD
                     L"
     gene            1338..1592
                     /locus_tag="VEJ68_05380"
     CDS             1338..1592
                     /locus_tag="VEJ68_05380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06237.1"
                     /translation="MDDLSNNDKLILLQYAISKYEEENILIEKLKNVLNQKDIDRGIA
                     TLIGTQKVRRIGPDILQNNVSHTGELPELPNHLKSIIDSL"
     gene            1638..>2534
                     /locus_tag="VEJ68_05385"
     CDS             1638..>2534
                     /locus_tag="VEJ68_05385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010195448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HXX06238.1"
                     /translation="MTIKNITVLGSGIMGHGIAQVSAMAGYNVVLRDIDKSFLDKAME
                     KIKWSLDKLVSKQKLSVDDANKIFARIVPKVELAEALKDCDLMIEAVPEIMDLKKKVY
                     SEIDSVAEEKTIYASNTSTLPITEIANVTTRPERFIGIHFFNPPQLMKLVEVIPGNKT
                     PKDLVELTVNFVKSVSKEPVVCKKDVAGFIVNRIFIPLVHEAAWSMDRTKSSMTEIDS
                     SVKFNLHFPMGIFELADFTGLDVIHKATIEMYSRDKKVINPHPLIQKLFDEKKLGQKS
                     GAGFYEYSNEKYERINLSEEQAK"
BASE COUNT          931 a          409 c          427 g          767 t
ORIGIN      
        1 cgcaccttgg aatatctggc ttgatattac gtgccatcat acaacttcaa aattctatta
       61 aaaatgaaaa tttattaaca aaggaagaaa atcacaaaaa tacaaataca taaaaaaata
      121 aaatatgaaa cagttcaaaa attcatttgt aatagatagc gatattgata ctgtttggaa
      181 attttatact gatataaagc accttcaaat aataactcca aaacatatgt cacttcaaat
      241 tttaaaatca caacatgata tacttcaaca aggaactgag gtatggctga gtgcaaaact
      301 ggtcatgaca tctaaatggc actcaaaaat aatccatcta aaaccatatg aatacttgga
      361 tgagatgatt acaggcagat tcaaaatgtg gaaacattta cataaattca atataatcta
      421 tcagaaaaaa acacaggtgg tagacgagat atattttgaa ttacctcatg gatgtgttgg
      481 aaaattgttt gaaaaccacg tactaaaaca actcagaaat atttttacat atagagaaaa
      541 aacaacaata gaatatttga aatcgcagtc tacaaatcta actcgctagc ttcttgcaag
      601 tcattggtga gatcaagata tgtatacgga tcgagttgct ttgcaaaaca tttgtcaata
      661 ttgataagat atacagaatg tagtcttgca ttaagaattt cacttgtttc aattggtgga
      721 tttttgtaaa accgatcaca tagatctttt atttttttaa cctcttcttt tgttcgcttg
      781 ctggggggtt taagaaacag tttaggaata ggtaaaatgc caacaacggg tgtagctagt
      841 gcaaatttgg agcaatgttg actatatcta gatattttac ttgcaattct tgccacgtaa
      901 taatcaattg tatctaatgc atgatcaggt ggagtaaacc cagtttcaat ttccatgata
      961 aacgtaccat cgccctttgt tgcaaaaaca tcacaaacaa gaatatcaga aagatgtttt
     1021 tcaatgtcta ctacatatcc ttgggcaata agattagatg cacaaatcat ttcaagcaca
     1081 gaatgattga tcttcacaag atttttttga tataattcaa ttaatctttc tcgtacaaag
     1141 tttatcctag ctttcatatc ggattctttt ccttccgcaa gcttttctgc tacagtgtac
     1201 acgtcatctg tgaatttctc aatgtccaaa atctagtcta caattggcgg tgggttttaa
     1261 gaagatagct aaaaccatta ttatattccc atgttgattt tacaaagatt ttttattaag
     1321 actgggacag tttacggatg gacgatctct caaacaatga taaattgata cttttacaat
     1381 acgcaataag taaatacgaa gaggaaaata tcctaattga aaaactaaag aacgttctta
     1441 atcaaaaaga cattgacaga ggcatcgcca cccttattgg aactcagaag gtacgtcgca
     1501 taggacctga catcttacaa aataatgtga gtcatactgg cgagcttcca gaacttccca
     1561 atcatttaaa atcaataata gatagtctat aacattaccg aataacttac aaagggataa
     1621 tcttattcaa attcaacatg acgattaaaa atataacagt gttgggttct ggcataatgg
     1681 gtcatggcat agcacaggtt tctgccatgg ctggatacaa tgtggtacta cgagatattg
     1741 ataagtcatt tttggataaa gcgatggaaa aaataaaatg gagtttagac aaacttgttt
     1801 caaaacaaaa actatctgta gatgatgcta acaaaatctt tgcaagaatt gtacccaaag
     1861 ttgaacttgc tgaagcactg aaggattgtg atttaatgat tgaagctgta cctgagatta
     1921 tggatttgaa aaagaaagta tattctgaaa ttgacagtgt tgcagaagaa aagacaatat
     1981 acgcgtcaaa cactagtaca ttaccaataa ccgagattgc taatgttaca acccgaccag
     2041 aacgatttat tggcattcat ttcttcaatc ctccacaatt gatgaaatta gttgaggtca
     2101 tacctggtaa caaaactcca aaagatcttg tggagttgac tgtaaatttt gtaaaatcag
     2161 tatctaaaga accagtagta tgtaagaaag atgtagcagg tttcatagta aatcgaatat
     2221 tcattccact tgttcacgaa gctgcttggt caatggatag aaccaaatct tctatgacag
     2281 agatagactc ttcggttaaa tttaatctgc attttccaat gggcatcttt gagcttgcag
     2341 attttactgg tcttgatgtc atacacaaag ctacgattga aatgtattct cgtgataaaa
     2401 aagtaatcaa tccacatcca ctgattcaaa agttatttga tgagaaaaaa ttaggacaaa
     2461 agagtggtgc aggattttat gaatactcaa acgaaaagta tgagcgcatt aatttatcag
     2521 aagaacaagc aaag
//
LOCUS       DASPUS010000231         3732 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1345634, whole genome shotgun sequence.
ACCESSION   DASPUS010000231 DASPUS010000000
VERSION     DASPUS010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 3732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3732)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3732
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1345634"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..408
                     /locus_tag="VEJ68_05390"
     CDS             <1..408
                     /locus_tag="VEJ68_05390"
                     /inference="COORDINATES: protein motif:HMM:NF012725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HXX06239.1"
                     /translation="GRSEEATHLLKKALEINKSNSTASCLLAGILNDLNSSDALKYYK
                     MSTALNPRCYLAYRGLGNFYLKMKDYTKAEENYTEAIGVNPQRFSPIYKNRGLVRLEL
                     NKTKQAKEDFKKYLEQMPEARDKANILQAIAEL"
     gene            452..862
                     /locus_tag="VEJ68_05395"
     CDS             452..862
                     /locus_tag="VEJ68_05395"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HXX06240.1"
                     /translation="MDCIFCKIVSGQIPAKKVYETQNSLVFLDVFPLTRGHVLVVPKA
                     HYVTIQQMSKVENADLFESVRLISNRIERIAPSSLLAVHNGKESGQEIPHVHVHIIPR
                     SSKDGVGPIHNMFTNRPNLNDNEFNQIAEILKKD"
     gene            complement(865..938)
                     /locus_tag="VEJ68_05400"
     tRNA            complement(865..938)
                     /locus_tag="VEJ68_05400"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(902..904),aa:Gly,seq:ccc)
     gene            992..1165
                     /locus_tag="VEJ68_05405"
     CDS             992..1165
                     /locus_tag="VEJ68_05405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-domain-containing protein"
                     /protein_id="HXX06241.1"
                     /translation="MDAKCPNCDKVAKLDDEATIVKCPHCGFEAKYDDYLALMKQRVG
                     EMAENFRFDRPGF"
     gene            1368..1781
                     /locus_tag="VEJ68_05410"
     CDS             1368..1781
                     /locus_tag="VEJ68_05410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S6e family ribosomal protein"
                     /protein_id="HXX06242.1"
                     /translation="MASFKLNISDKKGKTITKEVKEKDASPFLGLQVGTELDAALIGE
                     AGKLKITGGSDKSGVPLRADIHGGARKYILLSKGVGLRDAEMGQRIRKLIRGNTITEE
                     VYQINCLYDGELKIEEKASAEVQEKKEDTEKKKKA"
     gene            1812..3077
                     /locus_tag="VEJ68_05415"
     CDS             1812..3077
                     /locus_tag="VEJ68_05415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2 subunit
                     gamma"
                     /protein_id="HXX06243.1"
                     /translation="MHWKETLPDWYVKKYGYQPCVNIGTSGHVDHGKTTLIQALTGVW
                     TSAHSEELKRGITIRVGYADAAFYKCKNCESPVGYSVTPKCNNCGKESELLRVVSFVD
                     SPGHESLMANMLSGSALIDGAMLVVAANEKVPQPQTKEHLLALQTLGIKQIVLVQNKV
                     DLISYEEAMNNYSDIVKFVKGTNAAKAPIIPISAQSKLNIDALIGAIESTIPTPERDL
                     SKSTVMHVLRSFDVNKPGAKIKDMRGGVIGGSIIQGTFKVGDEIEIKPGLADEKTGKY
                     ESIVTQIASLGTGAGIVEEVKPGGLIAIATKLDPAMTRSDSLIGSVIGKPDTLPENSY
                     NAKIEVNLFDTAVGSGDEIKVSSIQTGESLRLSVGTAPLLSKVTSVRGKTVEIQFKRP
                     VCLFDNSKVAISRRIAERWRLIGAGVAIG"
     gene            3237..3449
                     /locus_tag="VEJ68_05420"
     CDS             3237..3449
                     /locus_tag="VEJ68_05420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06244.1"
                     /translation="MASHALKSIVDFKKIKICGNSVDDALVSYVEKNHGIVATIDIEL
                     KRRIKEKGGSILSVSNDRIILDSSKT"
     gene            3474..>3732
                     /locus_tag="VEJ68_05425"
     CDS             3474..>3732
                     /locus_tag="VEJ68_05425"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HXX06245.1"
                     /translation="MFDYKGIKIKWYGHDTFTFEKGIKVCIDPFKLSKPMDVDILLIT
                     HEHFDHCSIEDLQKISSNKTTIVSAKECLNKLEGIKCKEKLS"
BASE COUNT         1350 a          619 c          739 g         1024 t
ORIGIN      
        1 ggaagatcag aagaagcaac acatttacta aaaaaagctc ttgaaatcaa taaatctaat
       61 tcaacagcat cttgtctact tgctggaatt ctcaatgatc tgaactcttc agatgcccta
      121 aaatattaca aaatgagtac agcgctgaat cccagatgtt atcttgctta cagaggattg
      181 ggaaatttct atcttaaaat gaaagattac acaaaagcag aggaaaatta tacagaagca
      241 atcggggtca acccgcagag attttctcct atatacaaaa atcgtgggct agtaagactt
      301 gaactaaata aaacaaaaca agctaaagaa gatttcaaga aatatcttga acaaatgcca
      361 gaggcaagag acaaagcaaa tattctacag gctattgcag aattatgaat ctaacaaaag
      421 aatttaatgt tcttctaata aggcacatca gatggattgc atattctgta aaatagtctc
      481 aggacaaatt cctgcaaaaa aagtgtatga aacacaaaac tcacttgtct ttcttgatgt
      541 ttttccactt actcgcggcc atgtccttgt tgtaccaaag gctcactacg ttaccatcca
      601 gcaaatgagc aaagtagaaa atgcagacct ttttgaaagt gtaagattaa tctcaaatag
      661 aatagaacgt attgctccgt cttcattact tgctgtccac aatggtaaag agagtggaca
      721 ggaaataccg catgttcatg tacacataat tcctcgaagt tctaaagatg gagtaggtcc
      781 tatccataac atgtttacaa accgtccaaa tcttaatgac aatgaattta atcaaatagc
      841 agaaatcctc aaaaaagatt aaagtgcgga gtgcgggatt tgaacccgcg accttcagct
      901 tgggaagctg acgtcgtgcc gggctggact aactccgctc tatcgaaatt tagtacctaa
      961 cattatatag tttaattaca aaatactcct tgtggatgca aaatgtccaa actgtgataa
     1021 ggttgcaaaa cttgatgatg aagcaaccat agtaaaatgc ccacattgcg gttttgaagc
     1081 aaagtatgat gattatctgg cattaatgaa acaacgagtg ggtgagatgg ctgaaaattt
     1141 tcgcttcgac agaccaggtt tctagtgtta ccaaaaagag cctttatcag aacaatctaa
     1201 atgtgcacca caatttgtac atatcatatg gcatgcttgc atcgatttca tgaaattttc
     1261 acaccgtgga catttgatcg gatctttcac aattgtagct catacaagta attttaaaag
     1321 atttaggtac aaagattaat taatagtctt aaaacttttt ttactgcttg gcttcattca
     1381 agctaaatat atctgataaa aaaggaaaaa ccataacaaa ggaggttaag gaaaaagacg
     1441 caagcccatt tttgggattg caagttggaa ctgaattaga tgcagctctt attggagaag
     1501 caggaaaact aaagataaca ggtggaagtg acaaatcagg ggttccctta cgagcagata
     1561 ttcatggtgg tgctcgcaag tatattctct tatccaaagg tgtaggtctt agagatgcag
     1621 aaatgggcca acgtatacgc aagctgataa gaggaaatac aataactgaa gaagtttatc
     1681 agataaattg tttgtatgat ggagaactaa agatagaaga aaaagcaagt gctgaagttc
     1741 aagagaaaaa agaagataca gaaaagaaaa aaaaggcata ggttaacata ggtcacattt
     1801 ttagctagtt tgtgcactgg aaggaaactc tacctgattg gtatgtaaaa aaatatggtt
     1861 accaaccatg tgtgaacata ggaacatctg gtcatgtcga tcatggtaaa acaactctta
     1921 tacaagcact tacaggtgta tggacaagtg ctcacagtga agagctaaaa cgtggaatca
     1981 ccatcagagt aggatatgca gatgcagcat tttacaaatg taagaattgt gaatcccccg
     2041 tgggatattc agttaccccc aagtgcaaca attgtggaaa agaaagcgag ttattacgag
     2101 tggtaagctt tgttgacagt cccggtcatg agagtctcat ggcaaacatg ctttctggct
     2161 ccgcgttaat tgatggtgca atgttagtag tagcagcaaa cgaaaaggta ccgcaaccac
     2221 aaacaaagga acatcttctt gctctacaaa ctcttggtat caaacagatt gtcttggttc
     2281 aaaataaggt ggatcttatt tcatacgaag aagcaatgaa taactattcc gatattgtta
     2341 agtttgtaaa aggaacaaat gctgctaaag ccccgattat tcctatctct gcacaatcaa
     2401 aattaaatat tgacgcatta attggtgcaa tagaatccac cattcctaca cctgaacgag
     2461 atttatcaaa aagtaccgtg atgcatgtgt taaggtcatt tgatgttaac aaacctggtg
     2521 caaaaataaa agatatgaga ggtggagtga tcggtggaag tattatccaa ggaacattca
     2581 aggtaggaga tgagattgag ataaaacctg gtcttgcaga cgaaaagacc ggcaagtacg
     2641 aatctattgt aactcaaata gcttctcttg gaactggtgc tggtatagtg gaagaagtta
     2701 aacctggtgg tcttattgcc attgcaacca aattagatcc tgccatgaca agaagtgatt
     2761 cactaatagg ttccgttata ggaaagcccg atacattacc tgaaaattct tacaatgcaa
     2821 aaattgaagt aaatctattt gacactgcag taggatccgg agacgaaatc aaagtctcct
     2881 ccattcaaac cggtgaatct ctaagattga gcgttggaac tgcccctctt ttatcaaaag
     2941 ttactagtgt acgaggaaaa actgtggaga tccaattcaa aagaccagtt tgtcttttcg
     3001 ataacagtaa agttgctatt agtaggagaa ttgcagagag atggagatta ataggtgccg
     3061 gtgtggctat tggttaaagt tgtctgtgac accagttttt taatgcacat atcttctaga
     3121 aaaattaaga acatgtctta tctagaggaa gaaattggat cattagaatt tgtcgtacca
     3181 gatttggttg aagatgaatt ggtacatatt tccaacagca ataataaaaa aaaagcttgg
     3241 cctctcatgc gttaaaatct atcgtagatt ttaagaagat aaaaatttgt ggcaattctg
     3301 ttgacgatgc actagtatcc tatgtagaaa aaaatcatgg aattgttgca acaatagata
     3361 ttgaacttaa aagacgaata aaggaaaagg gagggtccat tctgtcagtc tcaaatgaca
     3421 gaataattct agattcaagt aagacttaac ttttagatac taagattaat tttatgtttg
     3481 attacaaagg aatcaaaata aaatggtatg gacatgatac ttttactttt gaaaaaggca
     3541 tcaaggtttg cattgatccc ttcaaacttt caaaaccaat ggatgtagat atactgttga
     3601 taactcacga gcattttgat cattgcagta tagaggacct tcaaaaaatt tcatcaaata
     3661 aaacgacaat agtatctgca aaggaatgct taaacaagtt agaaggtata aaatgcaaag
     3721 aaaaattaag ta
//
LOCUS       DASPUS010000232         5027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1346299, whole genome shotgun sequence.
ACCESSION   DASPUS010000232 DASPUS010000000
VERSION     DASPUS010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5027)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5027
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1346299"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..853
                     /locus_tag="VEJ68_05430"
     CDS             <1..853
                     /locus_tag="VEJ68_05430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HXX06246.1"
                     /translation="GYHVTIRLLDPPLHEFLPNTEELMNKIYLLEKQGASNDLDNTKK
                     LLERAKELAEINPMMGHRGVRVGITFPEIYEMQISAICEASAELLKEKIKIHPQIMIP
                     QVGSVSELNHIKKIYDKIKLKVESRFGIKLKINFGTMMEVVRACLTADELAQIAEFFS
                     FGTNDLTQAVFSFSREDAEGKFIPEYFEKEIMAENPFQSLDVNGVGSLIQIAISKGRS
                     VKPNLEIGICGEHGGDPKSIKFCHNSGLSYASASSHRVPIAILAAAQAAIEKTSKSPK
                     NKSKRRR"
     gene            943..1497
                     /locus_tag="VEJ68_05435"
     CDS             943..1497
                     /locus_tag="VEJ68_05435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HXX06247.1"
                     /translation="MLPRLESIKQARMKIGLTQQKLASLTGVSTSMINQIESGRCQPS
                     YATARKIFEVLWSLESQSSMKAGDICSKEIVKLKTTDTLHDAIKKMQDQSISQVPVFD
                     GNEVVGLITEDGIVKYLLDSDEMQRKKIKLSEVMDPRPPIVDYNTPVKTLVSLIRYSK
                     CVLVSKSSKIVGIITASDTLKLAE"
     gene            1499..2092
                     /locus_tag="VEJ68_05440"
     CDS             1499..2092
                     /locus_tag="VEJ68_05440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06248.1"
                     /translation="MNSKIFYCAVVTSIIIFSAIKGSDAQSNYNNAPNTPNWSGSPIL
                     IYRDSFSPTSEVHILINAPDFNSSPYILDTIGDDPQYKLTVSTREASIPYRLVETGPD
                     TGVFSGYVTLSSTTSTCSPVCGPTDGYLAASGDDAITVSFTYSRDRTITNTYPSDYSI
                     GTINQSTTPEFGPLASLVITISTIGTIAFTRIHKDIS"
     gene            complement(2097..2492)
                     /gene="mce"
                     /locus_tag="VEJ68_05445"
     CDS             complement(2097..2492)
                     /gene="mce"
                     /locus_tag="VEJ68_05445"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HXX06249.1"
                     /translation="MKIDHVAIAVNNLDNAVKEYQNALGIKEVEFETVESEGVRVAIL
                     HLNNSRIELMEPTKDTSPIKKFLDTRGEGLHHIALETDKIEGEVDRMKGNGVRFLGDV
                     RPGSRGTKITFIHPKSLHGVLAELCSHPK"
     gene            complement(2494..4065)
                     /locus_tag="VEJ68_05450"
     CDS             complement(2494..4065)
                     /locus_tag="VEJ68_05450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HXX06250.1"
                     /translation="MEKIKTDSNIPVKRVYDSKVKPKSKNELPGKHPFTRGIHPGMYR
                     DRLWTMRQYTGFGTADQTNKRFKYLLERGQTGLSMAFDLPTQIGYDADDSHAEGEVGK
                     VGVSITSLKDMMTCFNGIPLDKVSTSMTINSTASSLLSLYIAAGESQGVKSEQLRGTT
                     QNDILKEYIARNTYIYPPRPSMRLIGDMIEYCSKKVPQWYPISISGYHMREAGCNAVQ
                     EVAFTLANAIEYIDTCVQRGLKIDDFAPRLSFFFCCTSEFLEEVAKFRVARRIYAKIV
                     KERFHAKDAKSLQLKFHVQTSGESLTAQQPDNNIVRVAIQSMAAVLGGCQSLHTNSKD
                     EALALPTEAAVKIALRTQQIVGHESGITKTVDPLAGSYYVENLTDTIEDQVNKYLKRI
                     DRMGGSLAGIEKGFFQSEIRQNAYRLKKEIDSNERIIVGVNKFTDAAEEKPEIMKIDD
                     SIQVKQIQNLKELRSTRDNKKTESALSKMKNAAEKDENLMPYILESVRSYATLGEISN
                     TFREVFGIYQPKESF"
     gene            complement(4070..4984)
                     /gene="meaB"
                     /locus_tag="VEJ68_05455"
     CDS             complement(4070..4984)
                     /gene="meaB"
                     /locus_tag="VEJ68_05455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0015819 - lysine transport [Evidence IEA];
                     GO_process: GO:0015822 - ornithine transport [Evidence
                     IEA];
                     GO_process: GO:1903826 - L-arginine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HXX06251.1"
                     /translation="MDLVTDLRQGKRRAIAKAISIVENNEKEARTLIKKIYKNTGKSL
                     TIGITGPAGAGKSTLINKTSMELNKLGYKTAVLAIDPTSHITGGAILGDRVRMTESTD
                     SGTYIRSMASRGATGAIALALRNSIRILEFAGFDPIIIESVGAGQTEIDIAKVVDITT
                     VVFNPNTGDNIQTIKAGLTEIGDIYLINKCDLPGANQLFDSVRDFIGMSERNPIVMMT
                     STKSNKGITEFAKKLKGLIEERRKIKKLKDESRLDAELKDIVLNNVKNKVSNMLDSSN
                     TYARYLKKVQKKDLDPFEAADKISKLLK"
BASE COUNT         1514 a          993 c          876 g         1644 t
ORIGIN      
        1 aggatatcac gtaacaataa gacttttaga tccaccgcta catgaatttc tgccaaatac
       61 tgaagagtta atgaataaga tttacttact ggaaaagcaa ggtgcatcaa atgaccttga
      121 caatacaaaa aaattacttg aaagagcaaa ggaactagct gaaatcaatc caatgatggg
      181 tcacagagga gtaagggttg gcattacatt tcctgagata tatgaaatgc aaatcagtgc
      241 aatatgtgaa gcatcagctg agctcttaaa agaaaaaata aagattcatc cacaaataat
      301 gattccacaa gttggaagtg taagtgaatt aaatcacatt aaaaaaattt atgacaaaat
      361 aaaattaaag gtagaatcac ggtttggaat aaaattaaag attaattttg gtacaatgat
      421 ggaagtagtt cgtgcttgtc tgactgcaga cgagttagca cagatagcag agttttttag
      481 ttttggtact aatgacctta cccaagcagt tttcagtttt agtagggaag atgcagaagg
      541 taaattcatt cctgaatatt ttgaaaaaga gataatggct gaaaatccgt ttcaatctct
      601 tgatgtcaac ggtgtaggca gtctaataca gattgccata tccaaaggaa gaagtgtaaa
      661 gccaaatctt gagataggaa tatgtggaga acacggagga gatcccaagt ctatcaagtt
      721 ctgccacaat tcaggattgt cgtatgctag tgcatcctct catagagtgc ccatcgcaat
      781 tcttgctgca gcacaagcag ccattgaaaa gacttcgaaa tctcctaaaa acaaatcaaa
      841 acgtagaaga taatcaatta gataagcacg gtatgctgtt aagaaatttt gttgctaagc
      901 aacaaagaac tgaaatatcg accatgataa gttagatgtt acatgttacc aagactcgag
      961 tccataaagc aagctagaat gaagattggc ttgacacaac aaaaacttgc atcacttaca
     1021 ggtgttagca cttcaatgat aaatcagata gaatctggaa gatgccagcc aagctatgcc
     1081 actgcaagga agatcttcga ggttttgtgg tcacttgaaa gtcagtcatc catgaaagct
     1141 ggtgatattt gtagtaaaga gattgtaaaa ctaaagacta cagacactct acacgatgct
     1201 ataaaaaaaa tgcaagacca gtcaattagt caggttccag tttttgatgg taacgaagta
     1261 gtcggattaa taacagaaga tgggattgta aaataccttc ttgatagtga cgagatgcag
     1321 agaaaaaaga tcaaattatc agaagtgatg gacccacgcc cacccattgt agattataat
     1381 acaccggtaa agactttggt ttcactaata agatactcga aatgtgttct agtctcaaag
     1441 agcagtaaaa ttgtaggaat aattacggca tctgatacat taaagttagc tgagtagagt
     1501 gaactcaaaa atattttatt gtgcagtagt aacgtcgatc attatcttct cagcaataaa
     1561 aggatcagat gcacaatcaa actataacaa tgctcctaac accccaaact ggagcggatc
     1621 accgattctg atatacagag attcattttc tccgacttct gaagtgcaca ttttaatcaa
     1681 tgcgcccgat tttaattcaa gtccatacat attagacacg ataggggatg acccacaata
     1741 caaattgacg gtctccacta gagaggcaag cataccatac agacttgttg aaaccggacc
     1801 tgatacaggt gtcttttcag gttatgtaac cctatcaagt acaacttcca cctgttcacc
     1861 agtttgtggt ccaacagatg gatatttggc agcatctgga gatgatgcaa taacggtttc
     1921 atttacatat tcaagagaca gaacaatcac caatacttac ccatcagatt actccattgg
     1981 aacaatcaat caatcaacaa ctccagaatt tggaccactt gcaagtcttg ttataacaat
     2041 atcaacaatt gggacaattg catttacaag aattcataaa gatatcagct aatacactat
     2101 tttggatgcg agcacagttc agctagcaca ccatgaagtg attttgggtg gataaaagtt
     2161 atctttgtac ctctagaacc aggcctgaca tctccaagaa atctcacccc atttcctttc
     2221 attctatcaa cttcaccttc tatcttatct gtttcaagtg caatatgatg caatccctca
     2281 cctcttgtgt ctagaaattt cttaattggg cttgtatctt ttgttggctc cataagttcg
     2341 attctagaat tgttaagatg taatatagca actcgtactc cttcactttc tacagtttca
     2401 aattcaactt ctttaatacc aagagcattt tgatattctt ttactgcgtt atccaaatta
     2461 tttactgcta ttgcaacatg atctatcttc atcttagaac gattcctttg gttggtagat
     2521 tccaaatact tctctaaatg tattgcttat ctctcccaat gttgcataac ttcgaactga
     2581 ctctaaaata tatggcatca agttttcgtc tttttctgca gcatttttca tttttgagag
     2641 cgccgattca gtctttttgt tgtcacgtgt gctacgtagt tcttttaggt tttgaatctg
     2701 ttttacttga atgctatcat ctatcttcat aatctctggc ttttcttctg cggcatcagt
     2761 aaatttgtta acaccaacga ttattctttc gttgctgtca atctcttttt ttaatctata
     2821 cgcattttgc cttatctcag attggaagaa ccctttttct attccggcta gcgaaccacc
     2881 catcctgtct attcttttta gatatttgtt tacctgatcc tctattgtat ctgtgaggtt
     2941 ttctacataa tacgaacctg caagtggatc tacggtcttt gtaattccgc tctcatggcc
     3001 tacaatttgt tgtgtacgta gtgctatttt cactgcagct tcagtaggta acgctaatgc
     3061 ttcatctttt gaatttgtgt gtaatgattg gcaaccgccc aaaactgcag ccattgattg
     3121 aattgcaact ctgacaatat tattatcagg ttgttgtgca gttagcgatt caccgctagt
     3181 ttgcacatgg aatttgagtt gtaaagattt tgcgtcttta gcatgaaatc gctcttttac
     3241 tatttttgca taaatccttc gtgctactct aaacttggca acctcttcta agaattcact
     3301 ggtacaacaa aaaaagaatg acagtctcgg tgcaaagtca tcaatcttaa ggcctcgttg
     3361 aacacacgtg tctatgtatt caatggcatt tgctagcgta aacgcaactt cttgtacagc
     3421 attacatcca gcttcacgca tgtgataacc tgaaatcgag ataggatacc actgcggaac
     3481 tttttttgaa cagtattcaa tcatatcacc tatcaacctc atagatggtc ttggagggta
     3541 gatgtaggta tttcttgcaa tgtattcttt gagaatgtcg ttttgagttg taccacgtag
     3601 ttgttcactt tttactcctt gtgattcccc tgctgcaatg tacagagaaa gaagtgaaga
     3661 tgcagttgag tttattgtca tcgatgtact gactttgtca agtggaatcc cgttaaagca
     3721 ggtcatcatg tcttttagtg aggttattga aaccccgact ttaccaacct caccttccgc
     3781 atgtgaatcg tcagcatcat atcctatctg tgtcggcaga tcaaaagcca tacttaaccc
     3841 agtttgtccc ctctcaagca agtacttgaa tctcttattg gtctgatctg cagtgccaaa
     3901 gccagtgtac tgtctcatag tccaaagcct gtctctatac atgcctggat gaattcctct
     3961 agtaaatgga tgcttgccgg gaagttcatt cttgcttttt ggttttactt ttgaatcgta
     4021 gacccgtttg actggtatgt ttgaatctgt ttttattttt tccatagaat cactttaata
     4081 attttgatat cttgtcagct gcctcaaatg gatctaaatc ctttttctgt acttttttca
     4141 gatatctagc ataagtatta cttgaatcaa gcatgttgct aactttattt ttaacattat
     4201 ttaaaacaat atccttaagc tctgcatcta gtcttgattc gtcttttaat ttcttaatct
     4261 tccttctttc ttctataagg cctttcaact ttttagcaaa ttctgttatc cctttgtttg
     4321 acttggtaga ggtcatcatt actattggat ttctctcaga catgccaata aaatctcgta
     4381 cagagtcaaa aagttgattt gctccaggta gatcacattt gttaattaaa taaatatcac
     4441 caatctctgt taagcctgct ttaatagttt gaatattatc tccagtattt gggttaaaaa
     4501 ctacagttgt aatatcaacc actttagcaa tatcaatttc agtctgtcct gcacctacac
     4561 tttcaattat tataggatca aatcctgcaa attccaatat tcttatacta tttcgtaaag
     4621 ccaacgctat agcacctgta gctccacgtg atgccatact tcggatgtag gtaccagaat
     4681 ctgtcgattc tgtcatgcgt accctatcac ccagtattgc accacctgtt atgtgacttg
     4741 taggatctat tgccaataca gcagtcttgt aaccaagctt gtttagttcc atgctggttt
     4801 tgttaatgag agtacttttt cctgcccccg cgggacctgt tattcctata gtaagggatt
     4861 ttccggtatt tttgtaaatc tttttgataa gagttcttgc ttccttttcg ttattttcca
     4921 caatagaaat ggctttagca attgcccttc gtttaccctg tctaagatct gttaccaaat
     4981 ccatacagaa cattcacgac gttaatccac aataaaatct tgttgca
//
LOCUS       DASPUS010000233         5001 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1489624, whole genome shotgun sequence.
ACCESSION   DASPUS010000233 DASPUS010000000
VERSION     DASPUS010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5001)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5001)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5001
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1489624"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..225
                     /locus_tag="VEJ68_05460"
     CDS             <1..225
                     /locus_tag="VEJ68_05460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06252.1"
                     /translation="DAGQAKLNTLATKNSTSTFQSIVGQAQSDLNNAQTELGQVGSDK
                     YQGNQSSTIWTNIKAATDLIHQLQLMANHK"
     gene            343..1356
                     /locus_tag="VEJ68_05465"
     CDS             343..1356
                     /locus_tag="VEJ68_05465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008301038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HXX06253.1"
                     /translation="MSHLQKLFKLAPDLTICRIINGMWQVAGGHGIINPDSTISEMLQ
                     YHESGFTTWDMADIYAPAEEYFGQFQKRLAKKKGEKELENVQAFTKFVPNPGPMTRTI
                     VERSIERSIHNMNVKKIDMVQFHWWDYNDTRYLDALYNLSKLRDEGKLLHLGLTNFDT
                     ERVQIMVEQGFKILSNQVQYSIIDQRPSIKMVPFCQKHNIKILTYGTVLGGFLSEKYL
                     GKREPARSELDTYSLQKYKNMIDLWGGWNLFQELLSVLDTIAKKHGASISNVGTKYIL
                     DRTDVAGVIIGARLGIVEHRADNVKVFDLNLDKEDNENIKDVTSRSNDLFERIGDCGD
                     EYR"
     gene            1353..2294
                     /locus_tag="VEJ68_05470"
     CDS             1353..2294
                     /locus_tag="VEJ68_05470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06254.1"
                     /translation="MKKFSKHYTFLVSLTIFVTLVSPTAFAQMAPTNVNITVTTDRSS
                     YIFGDTIVVSGYIKTVVQGNVLTIRILDSYSNLVQEAQATVGTNGHYTASIEIDGSMW
                     KTGGTYTVLVQYGSSVQTQTSFSYTSTTAPINGIFQVQIPNSQETIGVPYAINGGSVK
                     NMAVDLSNISLTILIKSTNYGSITFSLPRTLLDSKTTFGTDAPFSILSDGEPIKPQKE
                     QVSSNERTLTIQFLQGDQAIQIFGTSAGSQSASTSSFTQNTSNNTSTQTANMSNTIQA
                     VPEFSLVIPVLLIGITSLIIFHRIQFNVKNSRRSIML"
     gene            2324..2740
                     /locus_tag="VEJ68_05475"
     CDS             2324..2740
                     /locus_tag="VEJ68_05475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HXX06255.1"
                     /translation="MAQGVITPSIAKLLEGKNFVSFATLMEDGSPHVAPTWVDHDGDI
                     ILINTAMGRIKEKNIRKDPRVALSIYDQENPYNMVSIRGKVIEITTDGADDQIDKLAK
                     RYFGVDKYPFRRPEEKRIILKIRPEKIHHQQPPPQK"
     gene            2826..3749
                     /locus_tag="VEJ68_05480"
     CDS             2826..3749
                     /locus_tag="VEJ68_05480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HXX06256.1"
                     /translation="MEFSHVESSYVSKDGCRLIWKGIDEDDQDAIVLDKDELDTLVEL
                     LSKESAGKVELEDEFSTILVNTDTVQFRLKERKMLEVPTTLLRKNILDYKQVPHEPKP
                     IKIYEKEFFPSIVIEDDEQNNLLNTVLENKNAISETDFFRVIATRRSTRNFDTSRFVE
                     QWKIDKILAAADTAPTAGNFQGFEVFYVKNREIKKRLIEAANNQPYVNAPLVLVFCTD
                     PDRVKIKFPSETLAKFSLQDATLAAAYSQLAASALGLSSIWIGMIDEDKVKQIIGTKL
                     RPSSILCIGYPHQKRPPKSRRKLKDLIHVIE"
     gene            complement(3824..4261)
                     /locus_tag="VEJ68_05485"
     CDS             complement(3824..4261)
                     /locus_tag="VEJ68_05485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06257.1"
                     /translation="MKLLQVSGLAIAIILFSVSSNLTSYVFAQTDDLQSQMDTAKNAA
                     LAGMKQVKNSMKSGGLKAGMQSAKNVMKSSLSTVGNNTDQALRDKTKNKLQSQMDTAK
                     DTAKAGMKEVKNYTKSVGLKDATQKVKNKPVWRCSLTGKLPPC"
     gene            4340..>5001
                     /locus_tag="VEJ68_05490"
     CDS             4340..>5001
                     /locus_tag="VEJ68_05490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06258.1"
                     /translation="MVFYGLAFSFFLYIALFAPQTVHSQIMAQSHIPFWIKTTTKWWS
                     QGQISDNDFVNSIQYLLQKQILQIPPPPNHSMPVNHQIPDWIKNSTGTWATGHEPDDE
                     FTSGIQYLMQSGILTSTQNSQNNEPVATPSTGTTNDITNNNQVLSDSDLVAMSANKYA
                     DGNVNLGDGKYVTSGPQKGFIYLCHIPPTGQGALGTGPWIHGNTWNFLDKPPVSGSVS
                     WP"
BASE COUNT         1686 a          984 c          941 g         1390 t
ORIGIN      
        1 gatgctggac aggcaaagct gaacacactt gctaccaaaa atagcacatc tacgtttcag
       61 tccattgtcg gtcaagcaca atcagatttg aacaatgcac aaactgaact aggacaggtg
      121 ggatcagaca agtaccaagg aaaccaatca agtactatct ggaccaacat caaggcagca
      181 acagacctaa tacaccaact acaactgatg gcaaaccaca aataacaact ctcccttttt
      241 ttattttttt tataacaaat cataacgtca agttcatact gactctcaag aaacgtctac
      301 ttggcccaca acttcttatc ttcaaaaata ttaaccaaag tcatgtctca cttgcaaaaa
      361 ttgttcaagc tagcacctga cctgacaatc tgcaggataa ttaacggcat gtggcaggta
      421 gccggaggac atggtatcat caatcctgat tcaaccatct ctgagatgtt acagtatcac
      481 gagtctggct ttaccacgtg ggatatggca gacatttacg caccagctga agagtatttt
      541 ggacaatttc aaaaaagact tgcaaagaaa aaaggagaaa aagaactgga aaatgtccaa
      601 gcatttacaa aatttgtgcc aaatccaggg ccaatgacta gaacgatagt ggagcgcagt
      661 atcgagaggt caattcataa catgaatgta aaaaaaatag acatggtcca gtttcactgg
      721 tgggattaca acgatacaag ataccttgat gcattataca atctatccaa gcttcgcgac
      781 gaaggaaagc tactacacct cggtcttaca aattttgata cagaaagggt acagatcatg
      841 gtagaacaag gattcaagat tttgtcaaat caggtacagt attcgataat agaccagaga
      901 ccctcaatca agatggttcc attttgccaa aagcataaca tcaagatact gacatacgga
      961 actgtacttg gtggattctt gtcagaaaaa tatctaggaa aaagagaacc tgcaaggtct
     1021 gaacttgata cgtatagttt acaaaaatac aagaacatga ttgatctttg ggggggatgg
     1081 aacttgtttc aagaactttt atcggtactg gataccatag caaaaaaaca tggtgcctcc
     1141 atttcaaatg ttggtacaaa gtatatcctt gacaggactg atgttgcagg tgtcatcatt
     1201 ggtgcgcggt taggcatcgt agagcaccgg gcagataatg ttaaagtctt tgacttgaat
     1261 ctagacaagg aagacaatga aaacatcaaa gatgttacat cgagatcaaa tgacctgttt
     1321 gaaagaattg gagattgtgg tgatgagtat cgatgaaaaa attcagtaaa cattacacat
     1381 ttttggtatc gttgactatc tttgttactc tagtatcacc aacagccttt gcacaaatgg
     1441 ctccgacaaa tgttaacatt acagtcacaa ctgacaggtc atcctatatt tttggagata
     1501 ccattgtagt ctctggatat atcaagactg tagttcaagg aaatgtcttg acaattagaa
     1561 ttttggactc ttacagcaat ctggttcagg aagctcaagc aactgttggt accaatggac
     1621 attacactgc ttctatagag atagatggtt caatgtggaa aactggcggt acttatacgg
     1681 ttcttgtcca gtatggttct tcagttcaga cccaaacatc cttctcgtat acgtctacaa
     1741 ctgctccgat aaatggtatc tttcaagtac aaattccaaa tagtcaagaa actatcggtg
     1801 taccgtatgc catcaatggg ggttcggtaa agaatatggc tgtagattta tcaaatatct
     1861 ctcttactat attgataaaa tctactaatt atggttccat tacattttca cttccaagaa
     1921 cattgcttga ttccaagaca acttttggta ccgatgctcc gttttctatc ttaagtgacg
     1981 gtgaaccaat taaaccacaa aaagaacaag tatcatcaaa cgaaagaacc ttaacaatac
     2041 aattcttaca aggagaccaa gctatccaaa tctttggtac cagtgcagga tctcaaagtg
     2101 cttcaaccag ttcatttaca caaaacactt ccaataacac atctacacaa actgcaaaca
     2161 tgtcaaatac aattcaggca gttccagaat tttcattggt tattccagtt ctgttgatag
     2221 gcattacatc attaattata tttcacagaa ttcaattcaa tgtaaaaaat tctagaagat
     2281 caattatgtt ataacttaaa tccaattgtt gcgtattgaa accgtggctc aaggtgtcat
     2341 aactccgtca attgccaaac tgcttgaagg taagaatttt gtatcctttg caacgttgat
     2401 ggaagatggt tcaccgcatg tcgcacccac gtgggttgat cacgatggcg atataatttt
     2461 gataaatact gcaatggggc gaataaagga gaagaatatc agaaaggatc caagagttgc
     2521 cctgagcata tatgatcagg aaaatccata taacatggtt tctatccgcg gcaaggtaat
     2581 agagattaca acagatggcg cagatgatca gatagacaag cttgccaagc gttactttgg
     2641 agttgacaag tatccgttta ggagaccaga agaaaagaga ataatcctga agattaggcc
     2701 tgagaaaatc catcatcaac aaccgcctcc acaaaaatga ttccatcaag aggttacatc
     2761 agaaagcgtg atgtcaacaa tacggtattc ttttttatca ccatgccaaa taataaaaac
     2821 aaataatgga attttcccac gtcgagtctt catatgtctc aaaggatggt tgtaggttga
     2881 tctggaaagg aatagacgaa gatgatcaag atgcaattgt acttgacaag gatgaactag
     2941 atacacttgt tgagttgttg tcaaaagagt ctgctgggaa ggtggaactt gaagacgagt
     3001 ttagtacgat attggtaaat accgatacgg ttcaattcag gttaaaagag cgcaagatgc
     3061 ttgaggttcc taccacactt ctcagaaaaa atattttgga ttacaaacaa gttccacatg
     3121 aaccaaaacc aatcaagatc tatgaaaagg aattttttcc atcaattgta atcgaagatg
     3181 acgagcagaa caatcttcta aacacggtat tagaaaacaa aaatgcaata tctgagaccg
     3241 actttttcag ggtaattgca acacgaagat cgactcgaaa ctttgacact tcccggtttg
     3301 tggaacaatg gaagattgac aagattctgg ccgcagcaga tactgcaccc actgcaggaa
     3361 actttcaggg atttgaagtg ttttatgtca agaacagaga aataaaaaaa cgcctaattg
     3421 aggcagcaaa caaccagcct tatgtgaacg caccacttgt acttgttttt tgtacagatc
     3481 ctgatagggt aaaaataaaa ttcccatctg agactcttgc caagttttct ctacaggatg
     3541 caacactagc agcagcatat tcacaacttg ctgcatcggc attagggttg agctcaatat
     3601 ggataggaat gattgatgag gataaagtaa aacagataat tggtacaaaa ttgaggccta
     3661 gctcgatact ttgcatcgga tatccgcatc agaaacgtcc tccaaaatca agaagaaagc
     3721 taaaggatct aattcatgtt atagaataga aaatattgtc aatagttagt ttgaaataaa
     3781 attccaaata aaaaaaatca aagtaaataa ttttcagtta attttaacat gggggcaact
     3841 ttccagtaag agaacaccgc catactggtt tatttttcac tttctgggtt gcatctttca
     3901 gccccactga cttcgtgtaa ttcttgactt ccttcatccc agctttagcg gtatcctttg
     3961 cagtatccat ctgtgattga agcttgttct tcgttttatc tctcaatgct tggtcggtat
     4021 tgttgcctac tgtactcagc gatgatttca tgacattctt ggcagactgc attccagctt
     4081 ttagtcctcc agacttcatg gaattcttta cttgcttcat tcctgccaag gctgcatttt
     4141 tagcggtatc catctgtgat tgaagatcat ctgtttgagc aaaaacataa cttgtcaaat
     4201 tactagaaac tgaaaataat attatggcaa ttgctaaccc tgatacttgt aataacttca
     4261 cacaattttt cttgaattat acataaaaag gagtcatatg tattaccata agacattggt
     4321 acctaaaatg cgcataaaca tggtctttta cggattggct ttctcatttt ttctttacat
     4381 tgctctattt gctccccaaa cagtacattc acaaatcatg gcacagtctc atattccatt
     4441 ttggatcaag actactacca agtggtggtc acaggggcag ataagcgata acgattttgt
     4501 aaacagtatt caatatttgc tgcaaaaaca aattttacag attccgccgc caccaaacca
     4561 ctcaatgcct gtcaatcatc aaattccaga ttggataaaa aacagcaccg gaacatgggc
     4621 aacaggacac gaacctgacg acgaatttac atcaggaatt caatatttga tgcagagtgg
     4681 aattttgaca tctacacaaa actctcaaaa taatgagccg gttgctactc caagtactgg
     4741 aactacaaat gacatcacaa acaacaatca agtattatca gacagtgatc ttgttgcaat
     4801 gtctgcaaac aagtatgccg atggtaacgt aaatcttggc gatggcaagt atgttacttc
     4861 aggaccgcaa aaaggattca tctacctatg tcatattcct cctacaggac aaggagcttt
     4921 aggtactgga ccgtggattc acggaaacac ttggaatttt cttgacaaac ctccagtcag
     4981 cggttctgtg tcatggccta a
//
LOCUS       DASPUS010000234         2905 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1346999, whole genome shotgun sequence.
ACCESSION   DASPUS010000234 DASPUS010000000
VERSION     DASPUS010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2905)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2905
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1346999"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="VEJ68_05495"
     CDS             <1..351
                     /locus_tag="VEJ68_05495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06259.1"
                     /translation="KKVPCVILDEKKFDEMMRSIAGKPVSVDTNLHILQDGQGHVFVN
                     MELNFSQGGIEEKILLYANESLQFFEALAETSMLAISSPHSQYGSSNVFMIQLPRAER
                     TLNALEIIKKGLKM"
     gene            complement(353..426)
                     /locus_tag="VEJ68_05500"
     tRNA            complement(353..426)
                     /locus_tag="VEJ68_05500"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(389..391),aa:Gly,seq:gcc)
     gene            510..785
                     /locus_tag="VEJ68_05505"
     CDS             510..785
                     /locus_tag="VEJ68_05505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06260.1"
                     /translation="MDSQLKEKLNKKIEEVTEKSEEIFKIINSLDELRTHSDSFAYGI
                     AIGRLYNSFYYQCRRILKRNPTDEEFTEFLKMLHTRQKEILDALRLD"
     gene            complement(771..1286)
                     /locus_tag="VEJ68_05510"
     CDS             complement(771..1286)
                     /locus_tag="VEJ68_05510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013482389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HXX06261.1"
                     /translation="MHGANYRTGNGQPYTRKQFIKGKPQIKIAKFSGGKRDADYDYCV
                     QLCSNEKVQVRHMAIESARLAANKAIETVAGETGYFSTLRIYPHILLRENKMIATAGA
                     DRLQEGMRGAFGKAVSLAARVQRDQVLMEAFVKKEHLEVAKKALHGAAVKLPITPTIK
                     VIKLKPASVKA"
     gene            1447..2016
                     /gene="endA"
                     /locus_tag="VEJ68_05515"
     CDS             1447..2016
                     /gene="endA"
                     /locus_tag="VEJ68_05515"
                     /EC_number="4.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000214 - tRNA-intron endonuclease
                     complex [Evidence IEA];
                     GO_function: GO:0000213 - tRNA-intron endonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0006388 - tRNA splicing, via
                     endonucleolytic cleavage and ligation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-intron lyase"
                     /protein_id="HXX06262.1"
                     /translation="MSDIESKVDGTLVKDHTLISDKEMQHNLEQRGFGEVIKNNFLLK
                     PFESLYLLYIDKLRIFKGKQSVNFDYLVDECIKYDSDALTKFLIYRDLRTRGYIAKDG
                     FGFGSDFRVYERGQFGEKGTKYVVFGLTEGRREKIGALQKQIEQITTMGKEPVLAVIE
                     RRGEVIYYKVSRIQFHQNKDQPGYSSIEF"
     gene            2048..2209
                     /locus_tag="VEJ68_05520"
     CDS             2048..2209
                     /locus_tag="VEJ68_05520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06263.1"
                     /translation="MDFKEIYCFNCKKSLGRYNEKYYTDQKVGEIIKACHSNHVYEGH
                     EIVIRRITT"
     gene            2309..2725
                     /locus_tag="VEJ68_05525"
     CDS             2309..2725
                     /locus_tag="VEJ68_05525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06264.1"
                     /translation="MRSLFILIAIALSIGILQMANASYGDVTLTNPAMVTTTGQPLTS
                     FHVGQQIAVQSMLTNHGTSEQHFTYLVQVLNNNGGTEYLEGTSASMVANQTFTEAQVW
                     VPKDPGTYKIQVFVWQSLSSAIPLTSVIQTPITVEP"
     gene            complement(2800..2875)
                     /locus_tag="VEJ68_05530"
     tRNA            complement(2800..2875)
                     /locus_tag="VEJ68_05530"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2837..2839),aa:Glu,seq:ctc)
BASE COUNT          949 a          522 c          559 g          875 t
ORIGIN      
        1 aaaaaggtac catgtgttat cctagatgag aaaaaattcg atgaaatgat gcgatctatt
       61 gctggcaagc cagtctctgt tgatacaaac ctgcacatac ttcaagacgg tcaaggacac
      121 gtctttgtta acatggagtt gaacttttca cagggaggaa tagaggaaaa gatcttgttg
      181 tatgctaacg agtcactcca attcttcgag gctcttgcgg agacatcaat gcttgctatc
      241 tcctctccac attctcaata tggaagttct aatgtgttta tgatacaact tccgcgagca
      301 gaacgaacct taaacgcttt ggaaataatt aagaaaggtc ttaaaatgta aatgcggttg
      361 ccgggatttg aacccgggtc gcggaattgg caatcccgca tattaaccaa gctgtactac
      421 aaccgctcaa acgatgtaga aaattctagt ctattaaagg gtactgtttg aaaacacaat
      481 tttttaacat catggtacca tgatatcaca tggattcaca acttaaagaa aagttgaaca
      541 aaaaaataga agaggtaacg gaaaaatcag aagaaatttt taaaataata aattcattgg
      601 atgaactgag gactcattca gattcttttg catatggtat tgccattggg cggttataca
      661 actcatttta ttatcagtgt agaagaatac taaaaagaaa tcctacggat gaagaattca
      721 cagaatttct caaaatgctt catacgcgac aaaaagaaat tcttgatgcc ttacgccttg
      781 actgatgcag gttttaattt aatgactttg attgtaggtg ttattggcaa ttttacggca
      841 gcaccatgca gggccttttt tgccacttcg agatgttctt tttttacaaa agcttccata
      901 agcacttggt ctctctggac tcgtgcagcc aaacttactg ccttgccaaa ggctcctctc
      961 ataccttctt gaagcctgtc tgctcctgct gtggcaatca tcttattttc tctgagtaat
     1021 atgtgggggt aaattctaag tgtcgaaaaa tatccagtct caccggcaac agtttcaatt
     1081 gccttgtttg cagcaagtct tgcagattct attgccatgt gtcttacctg tactttttca
     1141 ttagaacata actgcacaca ataatcataa tctgcatctc tttttccacc ggagaacttg
     1201 gctatcttta tctgaggttt acccttgatg aactgcttcc ttgtatatgg ctgaccgttg
     1261 ccagtgcggt agtttgctcc gtgcataaag atactttttg atgttggttt gggcccatat
     1321 tttaaccgtt agatcatgag attcaataat ctgaataata actggttatc atttctattt
     1381 caaagaccaa tttgatgtgc gtcaattaga gtagtgttat attgtgactg atgatatttc
     1441 gtcctaatgt ctgatataga atccaaagta gatggaacat tggttaaaga tcatacttta
     1501 atttcagaca aggagatgca acataattta gaacaacgag gatttggtga ggtaataaaa
     1561 aataattttc tgttaaaacc ttttgaatca ttatatcttc tgtacattga caagctacgc
     1621 attttcaaag gaaagcaatc tgtaaatttt gattatctgg tagatgaatg cataaaatac
     1681 gatagtgatg cgctcaccaa atttctcatc tatagggatt tacgtacgcg aggatatatc
     1741 gccaaggacg gatttggatt cggatcggat tttagagttt atgaaagggg acagtttggt
     1801 gaaaaaggaa caaaatatgt tgtgtttggt cttactgaag gaagaagaga aaaaatcgga
     1861 gccttacaaa aacaaataga acagataact actatgggta aagaacctgt tctggctgtc
     1921 atagaacgac gtggtgaagt aatttactac aaggtatcaa ggattcaatt tcatcaaaac
     1981 aaagaccagc caggatattc tagtatagag ttctaatttt aaatagtgaa atatgacatt
     2041 gacaattatg gactttaaag aaatttactg ttttaattgt aagaagagcc taggtcggta
     2101 taatgaaaaa tattacacag atcagaaggt aggagaaata atcaaggcat gtcactctaa
     2161 tcatgtatat gaaggtcatg aaattgttat tagacgaata acaacatgag tagatacaaa
     2221 tttctatgac tttaacaccg tgaactttta tagttgttga atcattaaac cgcaaatatt
     2281 ttatagtgaa aaatgaatcg gcaggtaaat gagatcatta tttattctca tagctatagc
     2341 attatcaatc gggattttac aaatggctaa cgcaagctat ggtgatgtta ccttgacaaa
     2401 tccagcaatg gttactacaa caggacagcc tctcaccagt tttcatgttg gacaacagat
     2461 agccgtacaa tcaatgctta caaatcatgg cacttcagaa caacatttta cctatcttgt
     2521 tcaggttctc aataataatg gcggaacaga ataccttgag ggaacgtcag cctctatggt
     2581 tgcaaaccaa acattcacag aagcacaagt gtgggttcca aaagatcccg gtacatataa
     2641 gatccaagta ttcgtttggc aaagcctttc ttctgcaata ccactcacta gtgtaatcca
     2701 aactccaatt actgttgaac cgtaactgct agtcataagg ttcggatata tacaatatta
     2761 caacagctac tgaaaaacaa atctttgaaa gcgagattat gctcccgccg ggatttgaac
     2821 ccgggatcac tgccttgaga gggcagtatg cttagccgga ctacaccaca ggagctattc
     2881 ttaatgccat aaagaatagc aattt
//
LOCUS       DASPUS010000235         2063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1490219, whole genome shotgun sequence.
ACCESSION   DASPUS010000235 DASPUS010000000
VERSION     DASPUS010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1490219"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..856)
                     /locus_tag="VEJ68_05535"
     CDS             complement(<1..856)
                     /locus_tag="VEJ68_05535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HXX06265.1"
                     /translation="MKLMLVVILALFILGSKISFGEKGTYVDKVEFIQYSDENTAIQE
                     VKNGNLDMYYQAVSSDTLDPKTRQGLNVFQSTGTEYSLLVNPAPSDNFNPFSIQQVRY
                     ALNYLVDRDLIVNEIMGGYGTSMISAYKPYDPDYLLILGELQSFNFRYNPILAEQIIS
                     DGLTKAGAKYINGEWYYSSKPIEVTIFIRNDDPIRESIGEILASQLQKTGFVVKKDYG
                     DLTKAFSVVYGSNPSDMEWNIYTEAYTISGFVRYDSVITAQMYSPWFSNMPGFNNPEY
                     WNYKDDYVD"
     gene            1009..1629
                     /locus_tag="VEJ68_05540"
     CDS             1009..1629
                     /locus_tag="VEJ68_05540"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HXX06266.1"
                     /translation="MNLQAFVKGIPGIIPGGISIHDFSMAIQTNKELATNIVDNFMQN
                     GIGTYQNELLYFKENDRLKASLLAISMGAAIDEVSRLLDWKDFESLTAEILENRDFET
                     TSNVILTKPRMQIDVVGIKSGIAILIDCKHWNNMSQSSLQVAAKKQVERTKHYVSKEK
                     VQAAIPVIVTLYQQEIKFVDRVPIIPIYQLDAFCEEFYGNLDELYS"
     gene            complement(1808..2011)
                     /locus_tag="VEJ68_05545"
     CDS             complement(1808..2011)
                     /locus_tag="VEJ68_05545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06267.1"
                     /translation="MVGQIQTTCKIDSEKKLQTIYQRTDTIYLRSVPLILITDQKQQK
                     INMDIMSLEAYQNPTMRLRGFYN"
BASE COUNT          673 a          322 c          361 g          707 t
ORIGIN      
        1 agtcaacata atcatcttta taattccaat attcaggatt attgaaaccc ggcatattag
       61 aaaaccaagg ggaatacatt tgggcagtta tcacagagtc atatcttaca aatccgctta
      121 ttgtgtaggc ttctgtgtat atgttccact ccatatcaga agggttggaa ccatatacta
      181 cagagaaggc ttttgttaaa tcaccatagt ctttttttac aacaaatcct gttttttgca
      241 gttgtgaggc aaggatctct cctattgatt ctcgtattgg atcgtcattt ctaataaata
      301 tagtaacttc aataggtttt gaagaatagt accattcacc atttatgtac ttggcaccag
      361 cttttgttaa tccatcagag ataatttgtt ctgcaagtat tgggttgtat cgaaagttaa
      421 atgattgaag ttctcccaaa attaaaagat agtcgggatc atatggtttg tatgcagaaa
      481 tcatagatgt gccatatccc cccatgattt cgtttacaat tagatctcta tctaccaaat
      541 agttcagtgc atatcgtact tgttgaattg agaaaggatt gaaattatcg gaaggtgctg
      601 gattgacaag aagactatat tctgtaccag ttgattgaaa tacgtttaga ccttgtctag
      661 tttttggatc tagtgtatca gatgagactg cttggtaata catatccaag tttccatttt
      721 ttacttcttg tattgctgtg ttttcatcag aatattgaat gaattctact ttatctacat
      781 aagttccttt ttccccaaat gaaatttttg atcctaaaat aaagagtgct agtatgacaa
      841 ctagcattag tttcatgatt tgttttgatt tgaactgtat ttaaccatca tcaattacca
      901 acagaaacaa ataggataaa attaaagaaa aatttgattt ttacttaatt tttagattag
      961 ttttctgttc atacagtatt tttataaaag tgtgataaac aatttttgtt gaatctacaa
     1021 gcatttgtca agggtattcc tggaattatc cccggaggaa tttcaataca tgatttttcc
     1081 atggcaattc aaacaaataa agaattagca acaaacatag tggataattt tatgcaaaat
     1141 gggattggaa cttaccaaaa tgaattatta tattttaaag aaaatgacag gttaaaggca
     1201 agtttgttag cgataagcat gggagcagcc atagatgaag tttctcgttt attagattgg
     1261 aaggattttg aatcattaac tgctgaaata cttgagaatc gtgattttga aactacgagt
     1321 aatgtcatac ttactaaacc tagaatgcag attgacgtag tgggaatcaa atcaggaatt
     1381 gcaattctta tagactgtaa acactggaat aacatgagcc aatcttcact acaagtagca
     1441 gctaaaaaac aagttgaaag aacaaaacac tatgtttcaa aggaaaaggt tcaagctgca
     1501 attcccgtta ttgtcacatt atatcagcag gaaataaagt tcgttgatcg tgttcctata
     1561 attccaatat atcagctgga cgctttttgt gaagagtttt atggtaattt agatgaactt
     1621 tattcgtaaa gcattgtata aaagaaaaag gcagtggtta caataaggaa tgcttgcgta
     1681 atacgcatgg ccatatcaag cgaatgagaa taatcttcaa gttgtttatc acccataact
     1741 ttgacacttg tttcattttc taataattca aacgaggcag atgaaacatt ctgttctgct
     1801 tttttagcta gttgtagaaa ccacgaagac gcatcgtcgg attttgataa gcttccaaac
     1861 tcataatatc catgtttatt ttttgctgct tttgatcggt aatgagtatc agaggtacag
     1921 atctcaagta gattgtatcc gttctttgat agatagtttg taatttcttc tctgaatcaa
     1981 ttttgcatgt tgtttgaatc tgcccaacca aggaaaaatt tctcatcacc gattttcata
     2041 catagaattg cgatcttacc agg
//
LOCUS       DASPUS010000236         4400 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1622604, whole genome shotgun sequence.
ACCESSION   DASPUS010000236 DASPUS010000000
VERSION     DASPUS010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4400)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4400
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1622604"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(39..203)
                     /locus_tag="VEJ68_05550"
     CDS             complement(39..203)
                     /locus_tag="VEJ68_05550"
                     /inference="COORDINATES: protein motif:HMM:TIGR01167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009986 - cell surface [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HXX06268.1"
                     /translation="MDFDLEMLLYLAIITIGIFVVPMGTESGPPYYLIAGLILISAGI
                     ILVYRKIKKK"
     gene            complement(373..444)
                     /locus_tag="VEJ68_05555"
     tRNA            complement(373..444)
                     /locus_tag="VEJ68_05555"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(410..412),aa:Ala,seq:tgc)
     gene            529..1086
                     /locus_tag="VEJ68_05560"
     CDS             529..1086
                     /locus_tag="VEJ68_05560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HXX06269.1"
                     /translation="MVLLKSEVVLKKGDRAPDFNLLGIDNKKHSLSEFRNHPLLVIFM
                     CNHCPYVQAKVGAMNEIYEKANGKITMIGINSNDPTNYPDDSFENMKNFAKEKNIKFY
                     YLVDETQEIAKKYGAVCTPDPFLFDKEFRLVFHGRIDNAMKPEDKATEKTMILNIEKL
                     LSGNKIEKDFDPSMGCSIKWKSQQT"
     gene            1113..1200
                     /locus_tag="VEJ68_05565"
     tRNA            join(1113..1151,1165..1200)
                     /locus_tag="VEJ68_05565"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1148..1150,aa:Ile,seq:gat)
     gene            1322..1672
                     /locus_tag="VEJ68_05570"
     CDS             1322..1672
                     /locus_tag="VEJ68_05570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6659 family protein"
                     /protein_id="HXX06270.1"
                     /translation="MDYEKFCKKVMGLDSKIRFAGLINEKGKLFAGGMREGLRSLEAQ
                     KDDEMLYMELVLRAKMRREFDKVLGPVEFAMSYRGKVIIMSFPITSGVLLISTEKGID
                     FSEIPFKILKLINR"
     gene            complement(1669..2565)
                     /locus_tag="VEJ68_05575"
     CDS             complement(1669..2565)
                     /locus_tag="VEJ68_05575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HXX06271.1"
                     /translation="MTRGYSTEKIRDKLIDILNQSKTGLTGIEIAEKLKINRVTISKY
                     LKIFAAEGLIKQKNMGSVNLWFVEAGIDQLSFPKDFFLVKNKYLEYVLSALNHEAHNL
                     IRVSLHSGANPSKLICEVIEPAIDAVENAFKNGKVGKSEKNFLDGIILASIFLIRLAD
                     KEIEPKKNIVIISTDYQNSLHAQAASAAFHMENWKTSLLGDMSTAIDVLFDIDLQRFL
                     NKIWSTREGIMIIVIFSSTEGAIKFFSQAVDTNKSKFGKNLYLALHTKMAKKTKTTAD
                     FISDDTATLLQWCQTVFESSQT"
     gene            3040..3426
                     /locus_tag="VEJ68_05580"
     CDS             3040..3426
                     /locus_tag="VEJ68_05580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06272.1"
                     /translation="MPKAGFKSITVSEEVYNRFHDIYRKNKHELAMKGINSFAGYITF
                     MMEDLMQKDETFARYAPKLEKISADDNRVVIKDNIKNRIAEVAVQNNELYCLLCEEKD
                     CVHIGFVFSLPEIYEVLHAKGIKHQR"
     gene            complement(3431..3549)
                     /locus_tag="VEJ68_05585"
     tRNA            complement(join(3431..3475,3492..3505,3524..3549))
                     /locus_tag="VEJ68_05585"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3493..3495),aa:Leu,seq:taa)
     gene            3648..3721
                     /locus_tag="VEJ68_05590"
     tRNA            3648..3721
                     /locus_tag="VEJ68_05590"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3682..3684,aa:Thr,seq:ggt)
     gene            complement(3812..4351)
                     /locus_tag="VEJ68_05595"
     CDS             complement(3812..4351)
                     /locus_tag="VEJ68_05595"
                     /inference="COORDINATES: protein motif:HMM:NF037930.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06273.1"
                     /translation="MSNKKKEVLDLAKATSVDLLEEKKPLHEILMGCMNMSKSLQISD
                     GNSWIELEINGYPIKHKTRDELYDNLPSYRKTGWKFFDIYGNVISLPPDIMDLFGKSI
                     VYHPVRELETKNEITIGNQFLEKFNKFISEHGMDYISKSVRIHEAKISKKEINQILEG
                     IERRTQDFLDTIITLLEID"
BASE COUNT         1451 a          721 c          810 g         1418 t
ORIGIN      
        1 aagatccagt tcaaagttta aacccacata gaaaaagact atttcttctt tatttttcga
       61 tagactagaa taattcctgc gctgattaag ataagacctg caatgagata gtatggcgga
      121 ccagattctg ttcccatggg aacaacgaat atgccaatgg taattatagc aagatacagc
      181 aacatttcta aatcaaaatc catagccatt tactgatgcc ctctttcttc cacgctataa
      241 agaatccttt ttccaggatt aaaagaggta tttaggtttc ttccatcatt gaacgttata
      301 gatcttgatt ttcacgcctt aggaatttgt cgcttttatt gattcgaata tttcgttctg
      361 aaaccgagaa cgtggactgg tggggatttg aaccccagac cccccgcgtg caaggcgggt
      421 attctaccgc tgaactacca gcccatcaca gggtttgaaa agggtgtgga ttttaattgt
      481 tgtctttatg tggtaaagat tttattgaca taattcaacg aaaattgtat ggtattacta
      541 aaatctgagg ttgttttaaa aaaaggagat agagctccag actttaattt acttggaatc
      601 gataacaaaa aacattccct gtcagaattt cgaaatcatc cattattagt aatttttatg
      661 tgcaatcatt gtccatatgt tcaagcaaaa gttggtgcta tgaatgagat ctatgagaaa
      721 gctaatggaa agataacaat gataggaata aacagtaatg atcctacaaa ttatcccgac
      781 gatagctttg aaaacatgaa aaattttgca aaggaaaaga atatcaaatt ctattattta
      841 gtggatgaaa cacaggaaat tgcaaaaaaa tatggtgcag tatgcactcc agatccgttc
      901 ttatttgata aagagtttag attggttttt catggtagaa tagataatgc tatgaaacct
      961 gaggacaagg ccactgaaaa aacaatgata ctcaatatag agaaacttct ttcaggaaat
     1021 aagatagaaa aagactttga cccatcgatg ggctgctcta tcaagtggaa aagccagcag
     1081 acttaaatga cagttggata ggaaaatttc ttgggccgat agctcagctt ggctggagcg
     1141 ttcgactgat aatattattc agatatcgaa aggtcgtggg ttcgaatccc attcggccca
     1201 ctcttgtata acatattcat aatgttaaga tcaatctcga taaatagatg tgaatattat
     1261 catcttcaat gtacaaacca agcctaacag tgaggaattg tgacatcaga ggaatgtaat
     1321 aatggattat gaaaaatttt gcaagaaagt aatgggtttg gattcaaaga taagatttgc
     1381 aggactaata aatgaaaaag gaaaattatt tgctggcgga atgagggaag ggctaagatc
     1441 acttgaagct caaaaagacg atgagatgtt gtatatggaa ttggtgctca gagctaaaat
     1501 gagacgtgag tttgacaagg tgttaggacc agtagaattt gcaatgtcat atagaggtaa
     1561 agtcataatc atgagttttc caatcaccag tggcgttctt ttaatttcaa cggagaaagg
     1621 tattgatttt tcagaaattc ccttcaagat attgaagctg ataaatcgtt aggtttgaga
     1681 actctcaaaa acagtttgac accattgaag caatgttgca gtatcatctg agataaaatc
     1741 ggctgttgtt tttgtttttt ttgccatttt ggtatgcaat gctaggtaaa gatttttacc
     1801 aaattttgat ttgttagtat ctactgcctg ggaaaagaat ttgattgctc cttctgtaga
     1861 cgaaaaaata actataatca ttattccctc tcttgttgac catattttat tgagaaatcg
     1921 ttgcagatct atatcaaata gtacatctat tgcagtggac atatccccta aaagcgatgt
     1981 tttccagttt tccatatgga atgcggcaga ggctgcctgc gcatgtagtg aattttgata
     2041 atcagtagaa attatgacaa tgttcttttt aggttcaatt tctttgtcgg ctaggcgtat
     2101 caaaaaaata gatgccaata ttatgccatc aagaaagttt ttttccgatt ttcctacttt
     2161 accattttta aaggcattct caaccgcatc tattgctggt tcaattactt cacaaattag
     2221 tttggaagga tttgcgcccg aatgtaaaga aactctaatg agattgtgag cctcatgatt
     2281 taaagcagat aaaacatatt cgagatactt gtttttaacc aaaaaaaagt ctttgggaaa
     2341 acttaattga tctatacctg cttctacaaa ccatagattt acacttccca tgtttttttg
     2401 tttgattaat ccctcagcag caaaaatttt cagatatttg gatattgtta cacgatttat
     2461 cttgagcttt tctgcaattt ctattccagt tagtcctgtt ttggattgat ttaaaatgtc
     2521 aattagttta tctcgtatct tttctgtact gtaaccgcgt gtcaataatt tttaaattga
     2581 atttctagta tatagcatta ctaaaaatca gtgagggcct aaaggtcctc actgatcggt
     2641 actttggtat ggtctggtgg cccaattacg tgtggtgtgg tatgcgtaaa ttacgagcgc
     2701 actatttttt catataacaa aaaaagtaaa taaaaaacac tcataattga taccaaatac
     2761 ttaaaagatt gatcaagcaa attccaggat tttatgtatg gaaagaattt ttgtggaaaa
     2821 aaacagatta tcccaaaaat ttagtataaa gaataaaaca tgtaaaatga atcacatcag
     2881 cttcatctga aaaatcaatc agccaaagta taccaattct aaactgaaaa ttgtttttca
     2941 gatatagaca cagtcagctg gcggttaacc tcgtgtcaca atacttcatg ccagaaatgt
     3001 taaataccag tactttaaag tacggtatag ataggtaata tgccaaaagc tggtttcaaa
     3061 tcaataactg tttccgaaga agtctacaac agatttcatg atatttacag aaaaaataaa
     3121 catgaactag caatgaaggg tatcaacagt tttgctggat acataacgtt catgatggaa
     3181 gatctaatgc agaaagatga aacatttgcc agatatgcac caaagttaga gaagatatct
     3241 gctgatgaca atagagttgt gataaaggat aacattaaga atagaattgc tgaagttgcc
     3301 gttcaaaata atgagcttta ctgtttgttg tgtgaagaaa aggactgtgt ccacatagga
     3361 tttgtttttt cacttccaga aatttatgaa gttctgcatg caaagggaat aaaacatcaa
     3421 agataaaaag tgcaggaggt gggatttgaa cccacgaacc cctaagagac gggatcaccc
     3481 attgttatga tcttaagtcc cgcgcgtcca aaggccatgc cttctttggc caggctcggc
     3541 gactcctgcg ttttattagc ataagattgg agaaattaaa cgttttatgg aaaaaaaaat
     3601 catgaccaag taagattaat aaggattcgt aagagcgagc ttgtcatgct tcgatagctc
     3661 agcctggtag agcgttacct tggtaaggta aaggtcgcgg gatcgaatcc cgttcgaagc
     3721 ttattgattt tcttacctcg tcattgttga tttccgtaat gccgttatag aattccgtaa
     3781 tgcctgactt gaaaaacact gaattaagaa attaatctat ttcaagaagt gtgattatag
     3841 tatctaagaa gtcttgagtt cttctctcta ttccctccaa aatctgattt atctcttttt
     3901 ttgagatttt tgcttcatga attcttacac tttttgaaat atagtccatt ccatgttcag
     3961 aaataaattt attgaatttc tccaagaatt gatttcctat tgtgatctca ttcttagttt
     4021 ccagttccct gactggatga taaacgatag atttaccaaa aagatccatt atatcaggtg
     4081 gcaaggaaat gacattacca taaatatcaa agaatttcca accagtcttt ctgtaacttg
     4141 gaagattatc ataaagttca tctctcgttt tgtgtttgat agggtatcca tttatctcaa
     4201 gttctatcca tgaattcccg tcagaaattt gaagagattt actcatattc atgcatccca
     4261 ttagtatttc atgtagcggt tttttttctt ccagaagatc tacactagtt gctttagcaa
     4321 gatccagaac ttctttcttt ttattactca agttcaacaa ctctgaaatt acctttgatt
     4381 ttactttatc tagttagtaa
//
LOCUS       DASPUS010000237         4540 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_2044181, whole genome shotgun sequence.
ACCESSION   DASPUS010000237 DASPUS010000000
VERSION     DASPUS010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4540)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4540
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2044181"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..180)
                     /locus_tag="VEJ68_05600"
     CDS             complement(<1..180)
                     /locus_tag="VEJ68_05600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HXX06274.1"
                     /translation="MIAWVIVFTIAKISKLDKHGFEIKPYSLTYKNQNVQLILTRLLN
                     RTQLATRVFANMSVVL"
     gene            265..591
                     /gene="cutA"
                     /locus_tag="VEJ68_05605"
     CDS             265..591
                     /gene="cutA"
                     /locus_tag="VEJ68_05605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HXX06275.1"
                     /translation="MGLIIISTYPNKKSILKIANLVVKKRLAACVNYTKIGSVYTWKG
                     KMENTEEYLALFKTTQKTKEFLKKEIEKTHPYEVPEIVELKMDHVSKPYLDWLVSSTN
                     DGKSKS"
     gene            complement(562..1614)
                     /locus_tag="VEJ68_05610"
     CDS             complement(562..1614)
                     /locus_tag="VEJ68_05610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mRNA surveillance protein Pelota"
                     /protein_id="HXX06276.1"
                     /translation="MIVKTIDENSVALIPEESDDLFTLRRIIRNGDRIIGDTTRAIKQ
                     EKDFSRPDRGERVKIRIALDVEKISLDNTVDRLRTQGTIAESDSESVKKGAHHSLILK
                     IGEPITLIKKKWNIIEKKLISEKKEHSSFLLVAIDTSDCGIGRLSGTHLNLIPNLYSG
                     ASGKRYKTKFNIEDFFGDVFFAISSSIREGDQIVIFGPGETKKRLANFLAEKSSLKGR
                     QIQVVEGIDSSGEDGIYTFVRSETMRQALVKSKIARVSSILDEIMLMVNKKSNKFTMG
                     FDDTVKANQAGAVQSLVFSDKIFEQHDEDKIIEFLNEVEEKGVEVYAVDSSTDVGLRV
                     SSLGGIVSTLRFSIVG"
     gene            complement(1659..2087)
                     /locus_tag="VEJ68_05615"
     CDS             complement(1659..2087)
                     /locus_tag="VEJ68_05615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06277.1"
                     /translation="MVTIDATCSLDSFRKFVILSTCNSFVPESYLEDYEVFPERETSP
                     GLIYVEAADKVTLKKIRDMTFVNAKEVLGIIYSSKSGNTNLKWRQVRRNMGKVTGDAS
                     TNTLVNLTEAGVITQEWVQNYLRKKAEEKQQEIKTNELTN"
     gene            2260..2679
                     /locus_tag="VEJ68_05620"
     CDS             2260..2679
                     /locus_tag="VEJ68_05620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HXX06278.1"
                     /translation="MNSFTEYLTYNVPSRRGFVNITPDVRKIVQKSGVKEGLCLVNAM
                     HITASVFINDNESGLHQDYEKWLEKIAPHEPTSKYEHNKTGEDNADAHLKRQVMGREV
                     VVAITKGQLDFGPWEQIFYGEFDGNRSKRVLVKVIGE"
     gene            complement(2876..3316)
                     /locus_tag="VEJ68_05625"
     CDS             complement(2876..3316)
                     /locus_tag="VEJ68_05625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent transcriptional regulator"
                     /protein_id="HXX06279.1"
                     /translation="MKDQEVLFVGTAEAEHVEMYLKAIWHIKEGGDPVKISTIAKMLN
                     VRQPSVVQMLKKLNETKLVNYNKGGVSLTKNGEQIGSNMMRNSRLLEVLMDSALKVDI
                     NEEMVCGIEHHMNEQFTDALCTMLKHPRKCPHNHDIPRGKCCKN"
     gene            complement(3337..4107)
                     /locus_tag="VEJ68_05630"
     CDS             complement(3337..4107)
                     /locus_tag="VEJ68_05630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HXX06280.1"
                     /translation="MSLSDKTRKALEKVGLTSYEIKTYASLLKTGPITASDLSQKSGV
                     PYSKIYEVLGTLEEKGWIGSDDSRPTQYFAKSPATAIHSTKQLFETEFRNNEDVILKE
                     LTPLYEQSGTSERPDIWIISGVINIATKILEMVDSCRNEVLVAIPKVAEALAKEALPK
                     LRLLHDRGVDITILVSEDVDTDTLKSLSRVAKVKIKKGLFGGGIISDKRYVVLLLGEE
                     LGTSGSKEAVAIWADHSGLAGFAREYFEYLLKESKDVK"
     gene            4241..>4540
                     /locus_tag="VEJ68_05635"
     CDS             4241..>4540
                     /locus_tag="VEJ68_05635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007403146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HXX06281.1"
                     /translation="MELIQISNLKTPTLGKRSTIRFTQSICPDCNMILDAEVFERDGK
                     VFMSKTCPTHGECEELYFGSYEMYRKFSTYWMDGKGAHAPNVMIEKCSCPNNCGLC"
BASE COUNT         1362 a          884 c          769 g         1525 t
ORIGIN      
        1 tagtacaaca ctcatatttg caaaaacacg tgtcgctaac tgagtacgat tcaagagtct
       61 agtaagtatg agttgtacat tttgattttt gtatgttaaa ctatagggtt ttatctcaaa
      121 tccatgttta tccaattttg atatctttgc gatcgtaaaa acaatgaccc atgctatcaa
      181 aacataaatg atagaatttt gcgttaaaaa tccaaaagcc aaactattga tactcttttt
      241 agtcaggcaa atttatcggt tgctatggga cttatcataa tttcgacata tccaaacaaa
      301 aaatcgattt taaaaattgc aaatttggta gtaaaaaaga gactagctgc ctgtgtaaat
      361 tatacaaaaa ttggctcagt ctacacatgg aaagggaaaa tggaaaatac ggaagaatat
      421 ttggcactct ttaagaccac gcaaaaaaca aaggaattcc tcaaaaaaga aatagaaaaa
      481 acacatccct atgaggtgcc agaaatagta gagctcaaga tggaccatgt aagcaaacca
      541 taccttgatt ggcttgttag ttcaaccaac gatggaaaat cgaagagttg aaacaattcc
      601 tccaagagat gaaactctaa gacctacatc ggtagatgaa tctactgcat aaacttctac
      661 tcccttttct tcaacctcat ttagaaattc aattatctta tcttcatcat gttgttcgaa
      721 aatcttatct gaaaacacta gcgactggac tgcacctgcc tggtttgctt tgacagtatc
      781 gtcaaaaccc attgtgaatt tattactttt cttgttcacc attagcatta tctcatctaa
      841 gatagaagaa acccttgcaa tcttactctt tactagtgcc tgtctcattg tttctgatct
      901 tacaaaggtg taaattccat cttccccact ggaatcaatt ccttcaacta cctgaatctg
      961 acgacctttc aaagatgatt tttcagccaa aaaatttgct aatcgtttct tagtttctcc
     1021 aggtccaaat atgacaatct ggtctccttc tctgatagat gatgaaattg caaagaaaac
     1081 atctccaaaa aaatcctcta tgttgaattt agttttgtat ctcttaccac ttgcaccaga
     1141 atacaagttt ggtattagat tcaaatgtgt accacttaat cttcctatac cacaatcaga
     1201 agtatctatt gctacaagga gaaaactact gtgttctttc ttttcagaaa taagtttttt
     1261 ttcaataatg ttccattttt ttttaattag tgttatgggt tcgccaattt tcaaaataag
     1321 agagtggtgc gcacctttct taactgattc actgtcagat tctgctattg tcccttgagt
     1381 tctcagtcta tcaactgtat tgtccagtga gattttttca acatcaagag caattctgat
     1441 ctttaccctc tctcctctat ctggcctgga aaaatctttt tcttgtttta ttgcgcgagt
     1501 agtgtctcca attattctat ctccatttcg tatgatcctt cttagagtaa aaagatcatc
     1561 agattcctct gggattaatg caacagaatt ttcatctatt gtttttacaa tcaatttgat
     1621 atcctattga agttacggca ataaaaagaa ggagtgatct agtttgttag ttcgtttgtc
     1681 ttaatttctt gttgtttttc ttcagccttt tttcttaggt agttttgaac ccattcttgt
     1741 gtgataacac cggcttcggt caagtttacc agcgtgtttg ttgaagcatc gccagtgacc
     1801 tttcccatgt ttcttctaac ttgtctccat tttagattgg tatttccact ttttgaggaa
     1861 taaattatgc ccaagacctc ttttgcattg acaaaggtca tatccctaat ctttttgaga
     1921 gttactttgt ctgctgcttc tacatagatc aagccaggtg aagtttcacg ttctgggaat
     1981 acttcataat cttccaagta actttctggt acaaacgaat tacaagtact taggattaca
     2041 aatttcctaa aactatcaag cgaacaagta gcatcgattg taaccatttg ataagattct
     2101 gccttcgcct tttatcaagc ttcttgaaag actcaattag gaactaatgg aaagagccat
     2161 tgcaggcgtt gatgaccaaa tccctttgat ttgatgagaa ggatcttgag ttctgagcct
     2221 gcacttaatt tttatgatga taaaaatttc atagatgtcg tgaactcatt cacagaatat
     2281 ctcacataca atgttccatc taggagagga tttgtcaata ttacaccaga tgtgagaaaa
     2341 atagttcaaa aaagcggtgt caaagaaggt ctttgtctag tcaatgctat gcatattact
     2401 gcaagtgtct tcataaatga taatgaaagt ggccttcatc aagactatga aaaatggcta
     2461 gaaaagattg ctcctcatga acctacatca aaatatgaac ataacaaaac tggagaagat
     2521 aatgctgatg cacatctcaa aagacaagtg atgggaagag aagttgttgt tgcaataaca
     2581 aaaggccaac tagattttgg accatgggaa cagattttct atggtgaatt tgatggaaat
     2641 agatcaaagc gagtacttgt aaaagtgatt ggcgagtaac tagtttaaag atccgcgctt
     2701 ctggttaccc tctgtgatgg gttttagttt gaaactctct tcatgatttt gaggaccatg
     2761 attacatttt atacagccta ttttgaaacc atttgaatcc ttgacataag tttcacagcc
     2821 gcagaagcaa gtcatattat cagctgttta ataccatgat ataacttata tcaaatcaat
     2881 ttttgcaaca cttaccacga ggtatgtcat ggttatgagg acactttctt ggatgtttta
     2941 acattgtaca caatgcatct gtgaattgtt cattcatgtg atgctcaatt ccacacacca
     3001 tttcctcgtt gatatccacc ttaagtgcac tatccataag cacttctagc agtctactat
     3061 ttctcatcat attggaacca atctgttccc catttttagt aagggagaca ccacctttgt
     3121 tgtaatttac aagcttggtc tcattaagct tctttaacat ctggactacg cttggttgtc
     3181 ttacgtttag catctttgca atggtactaa ttttaacggg atctccacct tcttttatat
     3241 gccaaattgc tttgagatac atctcaacat gttctgcttc ggcagttcca acgaataaaa
     3301 cctcttgatc tttcatatta tgtttgtact cctaccttac tttacatctt ttgattcttt
     3361 taacaggtat tcaaagtatt ctcgagcaaa tcccgcaagt ccagaatgat ctgcccaaat
     3421 agcaacagct tcttttgatc ctgatgttcc aagttcttct cctaaaagca atacgacata
     3481 tcgcttgtca gagattattc ctcctccaaa tagacccttc tttattttga cctttgcaac
     3541 tcttgataat gattttaaag tatcagtatc cacatcttca gatacaagaa ttgtgatatc
     3601 tacacctcta tcatgtagta atcgtagttt gggcaatgct tcttttgcaa gggcttctgc
     3661 aacttttgga atagctacta acacttcatt cctgcaagaa tctaccatct ccaaaatctt
     3721 tgtagcaatg ttgattacac cagaaataat ccagatgtcg ggtctttcac ttgtcccact
     3781 ttgttcgtaa agtggagtaa gctcttttag tatgacatct tcattatttc gaaattcagt
     3841 ctcaaataat tgctttgtac tatggattgc agtagctgga gattttgcaa agtactgggt
     3901 aggccttgaa tcatcagatc ctatccaacc tttttcttcc aaggtcccta atacttcgta
     3961 tatctttgag tatggaactc cagatttttg actcaggtca gaggcagtga ttggacccgt
     4021 cttgagtaat gatgcgtatg tctttatctc atagctggtc aagccaacct tctcaagggc
     4081 tttcctagtc ttatccgata aactcatacc atatgattcg gtgatttcat cgtatatatg
     4141 tctaggatgg atcatcttac atcacgaagg agttcaccta ttcatctggt gtcttgtagg
     4201 aaatggatta aatactgatt ttctaaagta tggctaagca atggaactaa tacaaatatc
     4261 taatcttaag actcctacgt tagggaaaag gtctactatt agatttaccc aaagcatctg
     4321 cccagattgt aacatgatac ttgatgcaga ggtctttgag agagacggta aggtattcat
     4381 gagcaagact tgtccaacac acggcgagtg tgaggagctc tactttggtt cttatgagat
     4441 gtacaggaag tttagtacct attggatgga tggaaaaggt gcacatgccc caaatgtaat
     4501 gattgagaaa tgttcatgtc ccaacaactg tggactgtgt
//
LOCUS       DASPUS010000238         7826 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1076572, whole genome shotgun sequence.
ACCESSION   DASPUS010000238 DASPUS010000000
VERSION     DASPUS010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 7826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7826)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7826
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1076572"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..130
                     /locus_tag="VEJ68_05640"
     CDS             <1..130
                     /locus_tag="VEJ68_05640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HXX06282.1"
                     /translation="AISVLDLPVIIGATYVLTAFFLVSIFVADVLYGYFDPRVRRE"
     gene            127..1485
                     /locus_tag="VEJ68_05645"
     CDS             127..1485
                     /locus_tag="VEJ68_05645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HXX06283.1"
                     /translation="MSFSSKEIWREFSQNNIGIIGIGILIALFCLSMIAFITIPATTF
                     KEWNDPVNWLSYPKSALPSWVNFFLMEKIPEHLILNPETSNQKYENVSVVTSLFSTDY
                     EYDSFPNDFIYQYVTNYSGSPLVQLSVTRPDGIEIKLISTSIPISKTNAEFSGMLFST
                     DNSVKKNLQNEINFQFQTDALYSQNLVFSQIDENKVLKGHYLFKATFYDVNGNLSLEQ
                     SKFILGGKVFGLMGTDELRRDLAVGILWGTPLALFIGITVSIGSVVIGLLYGVFAGFK
                     GKKTDEAMMRFNDVIYAMPALPLLIILAVTIGNSIFLIVGFLVIFGWVGTAKVSRSMA
                     MQIKTLQYVEASKLMGQKDIKIIFKHVIPQLLPYAFASIAISVPSAITTEAGLSFLGL
                     GDHTFPTWGQILHDASVYGAAERGMWWWILPPGIMIAITGLAFVFMGHAMDRIVNPKL
                     RH"
     gene            complement(1469..1798)
                     /locus_tag="VEJ68_05650"
     CDS             complement(1469..1798)
                     /locus_tag="VEJ68_05650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06284.1"
                     /translation="MTLEELRAKALFQNTIDTWIVLCEENNTDWYSSENYKKFISYLF
                     QNGLKLQKFPLCIKESGGMHQRGKDKTQFAEELAQQTDPNAAAYTVRLSDEMIKIIRQ
                     FNLNALV"
     gene            complement(1808..2047)
                     /locus_tag="VEJ68_05655"
     CDS             complement(1808..2047)
                     /locus_tag="VEJ68_05655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06285.1"
                     /translation="MLLPWPYGLIAALAIFIVFPLFLRNRALKRMGGMGTDSGAGGGF
                     FGQTQGIKYICLACNNKFKGGTCPRCGSKMKRADF"
     gene            complement(2150..2563)
                     /locus_tag="VEJ68_05660"
     CDS             complement(2150..2563)
                     /locus_tag="VEJ68_05660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mov34/MPN/PAD-1 family protein"
                     /protein_id="HXX06286.1"
                     /translation="MIFKKSERPKRAISMTVLARDGILSYCKMNHPNEGILILRGKAK
                     KGHILVEGLVIPPFFHTGPTFAGFPHSFLPFDPSYVGTVHSHPNGIAKPSVTDLHNFF
                     GFVTMIVQSPYEDDDIFAYDRDGNILELTIISDDS"
     gene            complement(2614..3894)
                     /locus_tag="VEJ68_05665"
     CDS             complement(2614..3894)
                     /locus_tag="VEJ68_05665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06287.1"
                     /translation="MVFGFGKKKNADNLASTAKQEKEILLTDISSFLKELESPRLSKV
                     IQGVKDVKNMIELDRKNINSTILEFEKDDLNLNDVDRNLKTVVKRGKDAVVYTIKKEI
                     TSKLSNIENYDNVLAFNVEVSQILKRMGDVLGLHTRAMHVFARKYAEKLKEEIAHLAK
                     NKNLLQSLIDEYESFRTDSDSIIAMVRKIDILELETIQKNKRLIEIGVETDATRKNIT
                     TLECEMSELQSKKEYQEFIEIKRKIDSLSSERNEIKSKINDQFSKISRPLSKYSYISS
                     FEKSMKKIMEDLIADPYQAISSQNKSAIIEILEATTKSVLAKNVSVKDYDKSVQQIEE
                     TINRIEEFLMLKDAFNKKVSSLESNLQIFNAELLESYEKNLQKAKLNLIDLETANKKI
                     EKDIEQNKTQIDSSKSQIQTSLNSLSSTKITIRS"
     gene            3956..4261
                     /locus_tag="VEJ68_05670"
     CDS             3956..4261
                     /locus_tag="VEJ68_05670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06288.1"
                     /translation="MSDMRLIMIGSVIIVAGFFVGGMAGSEYSQFAIQETSFGDCYDY
                     SSGTAIHVSCTQKQFDNLLELALSISLIGGGAIVLYKGIQGKWDQNVKSDEMVGPKF"
     gene            4295..5464
                     /locus_tag="VEJ68_05675"
     CDS             4295..5464
                     /locus_tag="VEJ68_05675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HXX06289.1"
                     /translation="MSLTKTEVFTRSRSLSIIIPTYNESQNITKMLDTIYSCLPQETN
                     AEVIVIDDNSPDGTGKIVEQYAKKLRSNGRCEIKTIIRKDQRGLSSAILAGIRASSGE
                     SVVVMDSDFSHPPETIAKMLQELKKSDCDIVVASRYVEGGSITGWPFKRKLISKGATK
                     IAQRSLGIKIKDPMSGFFAFRRHIIKNINFDAIGYKILLEILVKARGARVREIPYDFT
                     NRTFGQSKLDKSVIFDYGKSVWRLYRYGKSTKERRASVRFLSKAGRFYTVGASGLLVN
                     YLVSFLFGAVLSNLWYVYATMIGIMFSMTTNFILNKIWTFEDRDMNLKKTLRQYGSFI
                     AFSGIGAIFQLAMVYLLVESEHMSYALSLFIAVAIASIGNFILNKKWTFKEKIWN"
     gene            complement(5466..6926)
                     /locus_tag="VEJ68_05680"
     CDS             complement(5466..6926)
                     /locus_tag="VEJ68_05680"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HXX06290.1"
                     /translation="MNLNFSKPTYLILIILVVSGFTHVWNAVGFPDIFFDEGVYMRRA
                     MHVLTGLGPQEAYFHDHPFFGQIFLASILWATGFPNSLHPVATPSSISTLYLEPRIIM
                     GLLAVADTFLIYKIADNRYGTKIALISSILFAVMPITWLLRRILLDSILLPFLLLSIL
                     LALNSKNSKHRNLTVLLSGICLGLAIFTKIPVFTMIPLVAGLIYFYNGKKSRLVILWL
                     VPVLMLPLLWPLQSIEAGQFNLWVRDVISQTQRASTGLPYISEYFVLTDPVLFILGIS
                     GIIFCVVRKDYFILMWFVPFIIFLLAIGYNQYFYWIPVLPVFCISAAMLLVKTFERIK
                     REDLKNLPITVVLCITAFGLISTVMVISTNMSISQFQATAFVLQNVKDNDNQTTILAS
                     PSYSWIFNYVFHKENVFLDYSLVQWQPVDTPRVVLIADQHYEVDTMKGSQLEQIYNES
                     KTVASFDINNLYDIGYYPYTNLKVNWEGSHIDIKEK"
     gene            complement(7034..>7826)
                     /locus_tag="VEJ68_05685"
     CDS             complement(7034..>7826)
                     /locus_tag="VEJ68_05685"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HXX06291.1"
                     /translation="TYLVVGDNGRVEEDKAGVLGNNATGVPDDTGVIIPIAPLGPYYA
                     IGIRNSFGLTVDPITGKLWDTENGPDYGDEINIVPPNFNSGWGIVTGPANNTQLASIP
                     HYKNYAYHDPQFTWEKPVAPTAISFVDSNKFENYKNSILVGDCNNGNLYKFELNQNRD
                     GFVFQSDQLKNNIVNRGDSMDEIILGSGFGCMTDIKMGPDGLIYIVSLSDGIIYRIVP
                     KEMIDPNQSAFDNMWYLLFLIPIIGAIIFLSFRKKFIKPTAIDSR"
BASE COUNT         2405 a         1350 c         1410 g         2661 t
ORIGIN      
        1 agcaataagt gttcttgatt tgccagttat tattggtgca acatacgttt tgactgcttt
       61 ctttcttgtc agtatatttg ttgcagatgt cctatatggt tattttgatc caagggtaag
      121 aagagaatga gtttttcttc aaaagaaatc tggagagaat tttcacaaaa taatattggt
      181 ataattggta ttgggattct aattgcatta ttttgtttgt ctatgattgc ttttattact
      241 attcctgcaa caaccttcaa agaatggaat gatccagtaa attggctctc ttatccaaaa
      301 tctgctcttc catcatgggt aaactttttt cttatggaaa aaattccaga acatttgata
      361 cttaatccag aaacatcaaa tcaaaaatat gagaatgttt ctgtagtgac tagcctgttt
      421 tccactgatt atgaatatga ttcatttcct aatgatttta tttatcagta tgttacaaat
      481 tatagtggtt ccccgcttgt ccaattgtca gtaacaagac ctgatggtat tgaaataaaa
      541 ctaatttcaa catctattcc tatctccaaa accaatgctg aatttagcgg catgttgttc
      601 tcaactgata actctgtgaa gaagaatctg cagaatgaga ttaatttcca attccaaact
      661 gatgcactat attcccaaaa tcttgttttt tcccagattg atgaaaacaa agtcttgaaa
      721 ggacattatc tgtttaaagc gacattttat gatgttaatg gaaatctctc acttgaacaa
      781 tcaaaattta ttcttggggg aaaagtcttc gggttaatgg gtaccgatga gcttaggcgt
      841 gatctggcgg ttggaatttt atggggtacg ccattagctc tcttcattgg aataacggtc
      901 tctattggat ctgtggttat cggattgttg tatggtgttt ttgcagggtt caaaggaaag
      961 aaaaccgatg aggccatgat gcgttttaat gatgtcattt atgccatgcc ggcactcccg
     1021 ctcttaatta ttctcgcagt aacaatagga aacagtattt ttctgattgt cggctttttg
     1081 gtaatatttg gatgggttgg aacagcaaag gtctcgagaa gtatggctat gcaaataaag
     1141 accctgcaat atgtggaagc atcaaaatta atggggcaaa aagatatcaa aataatattc
     1201 aaacacgtta taccacaact gctcccatat gcatttgcaa gtattgcaat atccgttcct
     1261 tctgctatta ctacagaagc aggtctgagt ttcttaggtt taggtgatca tacatttcct
     1321 acatggggtc agattctgca tgacgctagc gtatatggtg cagcagagag gggaatgtgg
     1381 tggtggattt tacctccagg tattatgatt gctataacag gtttggcttt tgtctttatg
     1441 ggccatgcaa tggataggat agttaatcct aaactaaggc attaagatta aactggcgga
     1501 ttatctttat catttcatcg ctcagtctaa ctgtgtatgc tgcagcattg ggatcagttt
     1561 gttgtgcaag ttcctctgca aattgagtct tatctttccc cctctgatgc attcctccgc
     1621 tctcttttat gcataaagga aatttttgta atttgaggcc attttgaaaa agatacgaga
     1681 tgaatttctt gtaattttca gaagaatacc aatctgtgtt gttttcttcg catagtacta
     1741 tccatgtgtc tatggtattt tggaataatg cttttgccct taattcttct agtgtcattt
     1801 cagtttatta aaagtcggct cttttcattt tagagccaca tctaggacat gtaccacctt
     1861 tgaatttatt attacatgca aggcaaatgt actttattcc ttgagtttgt ccaaagaatc
     1921 ctccgcctgc acctgaatcc gtgcccattc ctcccattct tttgagggct ctatttctca
     1981 aaaagagtgg aaatactatg aatattgcta atgctgctat caaaccatat ggccatggta
     2041 acagcatttg taagccaatg ctaacggcaa gtgatccaaa aaggaaaatt agataagttt
     2101 tgtaatttat caacacaatt cgttatagca aaaagcttat aaatttttgt caggaatcgt
     2161 ctgagattat agttaattca agtatattcc catcacggtc atacgcaaag atatcatcat
     2221 cctcatatgg tgattgaaca atcatagtca cgaaaccaaa gaaattatgt aaatcagtta
     2281 cagagggctt tgctattcca tttggatgtg aatgaactgt tccaacataa ctcggatcaa
     2341 agggtaagaa tgaatgtgga aatcctgcaa aggtgggacc agtatgaaaa aagggtggaa
     2401 taacaagtcc ctctactagt atgtgtcctt tctttgcttt cccacgtaaa attaagattc
     2461 cttcatttgg atgattcatc ttacaatatg ataaaattcc atctctagct agaacagtca
     2521 tcgaaattgc tcgcttgggt ctctctgact tcttaaaaat cataccgtct ctctttgaga
     2581 ttaattaatt ttacaaaaat cataattgga attctatgac cgtatggtaa ttttggtact
     2641 ggataaacta ttcaggctgg tttgaatctg agattttgag ctatcaatct gtgttttatt
     2701 ttgttcgata tctttttcta tttttttatt cgcagtttcc aaatcaatta agtttaattt
     2761 tgctttttgc aagttctttt catatgattc taataattcc gcattaaata tttgtaaatt
     2821 agactctagg ctagacactt ttttgttaaa tgcatccttg agcattaaga attcttctat
     2881 cctgtttatc gtttcttcta tctgttgaac agacttgtca taatctttaa cagatacatt
     2941 ttttgcaagt actgattttg tggtcgcctc taatatttct atgattgcac tcttattttg
     3001 acttgagatc gcttggtacg gatcagcaat taaatcctcc atgatctttt tcatggactt
     3061 ttcaaatgaa gaaatgtaac tatacttgct gagcggtctt gatatttttg agaattgatc
     3121 gtttatctta cttttaattt catttctttc gctagataat gagtcaattt ttctctttat
     3181 ctcaataaac tcttggtatt ctttttttga ttgaagttca gacatttcac attctagagt
     3241 cgtaatgttt tttctagttg catctgtttc gacaccaatc tcaatcagtc tcttattttt
     3301 ttgtatggtc tcaagttcta atatgtctat ttttctaacc atagctatga tactgtctga
     3361 atctgttcta aaactctcat actcatcgat aaggctttgt aacaagttct tatttttagc
     3421 aagatgtgca atttcttctt tgagtttttc ggcatatttt cttgcaaaaa catgcattgc
     3481 tcttgtatgt aatccaagta catcccccat tctcttgaga atttgactga cctctacatt
     3541 gaatgctaaa acattatcat agttttctat gttggataat ttgcttgtaa tttctttttt
     3601 tatggtatat accactgcgt cttttcctct tttgacgaca gtttttaaat ttctatccac
     3661 atcatttaga tttaggtcgt ctttctcaaa ctctagaatg gtactattga tgttttttcg
     3721 atctaattca atcatgtttt taacatcctt gactccttgt attactttag ataatctagg
     3781 ggattctaat tcctttagaa atgaggaaat atctgtaagc aaaatttctt tttcttgttt
     3841 ggctgttgat gccaaattat ctgcattttt tttctttcca aagccaaaga ccatatctgt
     3901 actagtaagt ctataatctt acaacattaa atattgtgca ataccaacta atctggtgag
     3961 cgatatgcgg ctgataatga taggttcagt cataatagtt gcagggtttt ttgtaggcgg
     4021 aatggctggt tcagaataca gtcaattcgc aattcaagag acctcgtttg gggattgtta
     4081 tgattattct tcaggaaccg caatccatgt gagttgtact caaaaacaat ttgataatct
     4141 actcgaactt gcactttcaa tttcattgat tgggggtggt gcaattgttc tttacaaagg
     4201 aatacaagga aaatgggatc agaatgtcaa aagtgatgaa atggttggtc caaaatttta
     4261 attaggcgaa ggaaaaaaag tgtaataggc acaaatgtca ttaacaaaaa ctgaagtttt
     4321 tactcgttca cgttctcttt ccattataat tcctacatac aacgaatcac agaatattac
     4381 aaagatgcta gatacaatct attcttgtct tccacaggaa acaaatgctg aagttattgt
     4441 aattgatgac aattcccctg atggtacagg taagatagta gagcaatatg ctaagaaatt
     4501 acgatctaat ggaagatgcg aaatcaaaac aataatacga aaagatcaga gaggattgag
     4561 ttctgctata ctggcaggta tacgggcatc aagtggagaa tctgtagtag taatggatag
     4621 cgacttttct catcctccag agactattgc aaagatgctg caagagctaa aaaaatctga
     4681 ttgtgatatt gttgtggcat caagatatgt agaaggagga tcaattacgg gatggccatt
     4741 caaacgtaaa ctgatcagca aaggagcaac aaagatagca caacgtagtc ttggaataaa
     4801 aataaaggat ccaatgtctg gattttttgc atttcgaaga catattataa aaaatatcaa
     4861 ctttgatgca ataggataca agatactttt agaaattcta gtaaaggcac gtggtgcccg
     4921 agtcagagaa attccttatg attttacaaa tagaacattt ggacaaagta agctagacaa
     4981 gtccgtgatt tttgactatg gaaaatctgt gtggcgatta tatcgatatg gcaagtctac
     5041 aaaagaaaga agagcatcag ttcgcttcct atcaaaggca ggtagattct acaccgtcgg
     5101 tgcttccgga ttgcttgtaa actatcttgt ttcgttcctc ttcggggcag tcctttctaa
     5161 tctttggtac gtttatgcca ctatgatagg aataatgttt tctatgacta caaatttcat
     5221 cctaaacaaa atctggacat ttgaagatag agacatgaat ttgaagaaaa cactcaggca
     5281 gtatggttca ttcattgcat ttagtggaat aggtgcaata tttcagcttg ctatggtcta
     5341 tctcctagtc gaatcagaac atatgagcta tgctttatca cttttcatag ctgtggcgat
     5401 tgcatccatt ggaaacttta tactaaacaa gaaatggaca ttcaaagaaa aaatctggaa
     5461 ctaatttatt tttctttaat atctatatgg cttccttccc agtttacctt taggttggta
     5521 tagggataat atccaatatc atacagattg ttaatatcaa aggaggcaac agtctttgat
     5581 tcattgtata tttgttcaag ttgacttcct ttcattgtat ctacttcata gtgttggtct
     5641 gcaatcaata ccactcttgg tgtgtcaact ggttgccatt gaactagaga gtaatcaaga
     5701 aacacatttt ctttatgaaa cacatagttg aagatccatg agtatgatgg acttgcaaga
     5761 attgtagttt gattgtcgtt atcttttacg ttttgtaaga caaatgcggt tgcttgaaat
     5821 tgacttatgg acatattggt actaattacc atcacggtgc ttattagacc aaaagctgtt
     5881 atgcataaaa ccactgtaat aggcaggttc ttcagatctt ctcttttgat cctttcaaat
     5941 gtctttacaa gaagcatagc tgcagatatg caaaaaactg gcaataccgg aatccagtag
     6001 aaatattgat tgtaacctat ggcaagaagg aaaattatga aaggaacaaa ccacatcaaa
     6061 ataaaatagt cctttctaac aacacaaaag ataattcctg aaattcctaa aatgaataaa
     6121 accggatccg tgagtacaaa gtattcggat atgtatggca atcctgtact ggcacgctgt
     6181 gtctgtgata ttacgtctct tacccagagg ttgaattgtc cagcctcaat actttgtaga
     6241 ggccaaagca aaggtaacat aagaactggg actagccata atatgacaag tcttgatttt
     6301 ttaccattgt aaaaataaat caggcctgca actagtggta tcattgtaaa taccggaatc
     6361 ttggtaaata ttgctaaacc caggcaaatt cctgaaagta aaactgtaag gtttcggtgc
     6421 ttggaatttt ttgaatttaa ggctagaaga attgataaca aaagaaaagg caacagtatt
     6481 gaatctaaga gtattcgtct aagcaaccat gtgattggca tgactgcaaa taagatggaa
     6541 gaaattaatg caatttttgt accataccgg ttatctgcaa ttttgtaaat tagaaaggta
     6601 tctgccacag caagcagtcc cattattatt ctaggctcaa gataaagcgt agaaattgaa
     6661 cttggagtag ctactggatg aagggaatta ggaaatccag ttgcccacaa aatagatgca
     6721 agaaagattt ggccaaagaa aggatgatca tgaaaatagg cttcttgcgg accaagacct
     6781 gttagaacat gcatggctct tctcatatat acgccctcat caaagaaaat gtctggaaat
     6841 ccaacagcat tccaaacgtg tgtaaaccca gacactacta aaataatcaa tatgagataa
     6901 gtgggcttgg aaaaattcag attcatgaaa cctcacagca cttgtgatta aaattacttt
     6961 cctatgttag gaaacaaaac gttaacgaaa tgtaaaaatg attgttaaaa attacaatga
     7021 aaattagatt ttgttatctg ctatctattg cggtaggctt gatgaacttt ttacgaaatg
     7081 ataaaaatat gattgctcca ataattggaa tcagaaatag taaataccac atattgtcaa
     7141 aagcagattg attgggatca atcatttctt ttggaactat tctgtagatg attccatccg
     7201 acagtgagac aatgtagatt aatccatctg ggcccatttt tatatccgtc atgcatccaa
     7261 aacctgatcc taggataatt tcgtccatgg aatcacctct gttgactata ttatttttta
     7321 attggtcaga ttgaaataca aaaccatctc tattctgatt taattcaaac ttgtacaagt
     7381 ttccattatt gcaatctcca acaagtatac tattcttgta attttcaaat ttgtttgaat
     7441 ctacaaaaga tatggcagtt ggtgctaccg gcttttccca tgtaaattgt ggatcatgat
     7501 aagcataatt tttgtaatga ggaatgctgg ctagctgggt attgtttgca ggtccagtta
     7561 ctatgcccca tccgctgtta aaattgggcg gcactatgtt tatctcatcc ccataatctg
     7621 gaccattctc agtatcccat agttttcctg ttatgggatc cactgtaagt ccaaaactgt
     7681 tccgaattcc aattgcatag tatggaccaa gtggagcaat aggtattatc actccagtat
     7741 catcaggtac accggtggca ttgttaccaa gtactcctgc cttgtcttcc tctactctac
     7801 cattatctcc tactaccaga tatgtt
//
LOCUS       DASPUS010000239         2620 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1769034, whole genome shotgun sequence.
ACCESSION   DASPUS010000239 DASPUS010000000
VERSION     DASPUS010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2620)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2620
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1769034"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..518)
                     /locus_tag="VEJ68_05690"
     CDS             complement(63..518)
                     /locus_tag="VEJ68_05690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HXX06292.1"
                     /translation="MIDEKLAALDIILPTPPKPAGSYIPVVKTGNLLFVSGQIPMKEG
                     KVIFQGKVPINITIDDAQKAAKLCIVNALAQLKAEIGSLDKISKIVKVSGFVNSSQDF
                     AEQPKIINAASDLLFEIFGDKGKHSRIAIGVTSLPLNSAVEIDMIVEIN"
     gene            complement(545..700)
                     /locus_tag="VEJ68_05695"
                     /pseudo
     CDS             complement(545..700)
                     /locus_tag="VEJ68_05695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010190400.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
     gene            complement(752..1330)
                     /locus_tag="VEJ68_05700"
     CDS             complement(752..1330)
                     /locus_tag="VEJ68_05700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06293.1"
                     /translation="MGINSNVIVNAMAEIFREYIIDANGLISEHSYKYALSKLEKLDF
                     SLLDVSAFAGLVSSKHFSEEANYWTIGIFISAAINKIIKKDDIVTLNFANIDFYVDCI
                     GFRLKHGKIILHSKAGDYLGEHMSGGEITVQGHAGYYIGYCMSGGCITIQGNAGEHIG
                     RYMSGGVIKIKGKFGSIVTPYKGKIYHKGKLQ"
     gene            1434..1670
                     /locus_tag="VEJ68_05705"
     CDS             1434..1670
                     /locus_tag="VEJ68_05705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06294.1"
                     /translation="MEKGKSHSKNMQKDLDILQSRLDALEASSEDRHAKSLISVLKGL
                     VENQRQIVGEFDHLKKAIDLLTLQIFKVENSQKS"
     gene            1767..>2620
                     /locus_tag="VEJ68_05710"
     CDS             1767..>2620
                     /locus_tag="VEJ68_05710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06295.1"
                     /translation="MSSPKSPDDKSKPVLKDKNPHNYRKVGFSMIVISVSLVIIGLVV
                     WGIGSDYHFASNIMAAQEVDAMTPKAGYQIVLYDYSQPIGAKLKLLDHADSLDAAQAL
                     QQQYVQQNTDAAGQVLVFGTSKDDNVNLMANAEVAAQTPKHGYNTILFNTAYPVGAKL
                     TNVKHDESLANATQYEQLQVDQNKDPDVKVLIFTPVYTDNLKAVTGSSVPVAAFAAFA
                     NQTSAAANPPPATQNPPAVVNNTNTNVPPVIASNQTVSTSNQTASALNQTTIVSNQTG
                     SNVEQSSV"
BASE COUNT          833 a          506 c          465 g          816 t
ORIGIN      
        1 atgtggtgcg gtcataccaa gagtgatgat tggtcaattt ctaaagaagt tcaattctaa
       61 actcaattaa tctctacaat catatctatt tcaacagcag aatttaatgg aagacttgta
      121 acacctatgg caattcttga gtgttttccc ttgtcaccaa atatctcaaa cagtaaatca
      181 gatgctgcat tgatgatctt gggctgttct gcaaagtctt gtgaactgtt gacaaatcca
      241 gatactttga caatttttga aattttgtca agcgagccaa tctctgcctt gagctgagca
      301 agtgcgttta ctatgcataa tttggctgct ttttgagcat catcgattgt tatgttaatg
      361 ggcacttttc cctgaaaaat tactttgcct tctttcatag gaatctgtcc cgagacaaac
      421 aacaggtttc cagtttttac cactgggatg taagagccag caggttttgg aggagttgga
      481 agaataatat ctaatgcagc aagtttctca tcaatcatag tgttccttaa tctgtaaatg
      541 ttttaacttt gtgctgaaaa attactttgc cttctttcat aggaatttgt ccagagacaa
      601 acaataggtt tccagttttt accactggta tgtaagagcc agcaggtttt ggaggaattg
      661 gcagaataat atctaatgca gcaagttttt catcaatcat ggtgttcctt actctgtgaa
      721 tgttttaact ttgtgttgaa aattagacat actattgcag tttcccttta tgataaattt
      781 tccctttgta tggtgtaact attgaaccaa acttaccttt tatttttatg actcctcctg
      841 acatgtatct gccaatgtgt tcccccgcat taccttgtat cgtgatacat cctcctgaca
      901 tacaatatcc aatgtaatat ccagcatgac cttggactgt aatctcgcct ccagacatgt
      961 gttctccaag ataatcgcca gctttgctat gtaatatgat ctttccatgt ttcagtctaa
     1021 aaccaataca atcaacatag aaatctatgt tagcaaagtt caacgtcaca atgtcatctt
     1081 tttttattat cttgtttatt gccgctgaaa tgaaaatgcc aatagtccaa tagtttgcct
     1141 cctctgagaa gtgtttgcta cttaccaaac ctgcaaaagc tgaaacatcc aagagactga
     1201 agtctagttt ttcaagtttt gataatgcat atttgtatga atgctcagaa attaaaccat
     1261 tggcatcaat gatgtattct cgaaagattt cagccatggc gtttactatg acatttgaat
     1321 ttattcccac gatagattcc agaaggtttt atttcctttt ctagttttgt cttgatttta
     1381 tagttaaaac tttagtcctt tatgttgata taggatacaa atccaaattg gacatggaaa
     1441 aaggtaaatc acatagcaag aacatgcaaa aggatttaga cattttacaa tctaggcttg
     1501 atgctttaga ggcctcatcc gaagacagac atgctaaatc attgatcagt gtattaaaag
     1561 gactagttga gaatcagcga caaattgttg gcgaatttga ccatctaaaa aaagccatag
     1621 atttacttac acttcagatc tttaaggtgg aaaatagtca gaagtcatag ccttcagatt
     1681 gaattcaatt gcttgaattt gggcttttta gatagtatgg acctctaata aaagattaaa
     1741 ttcagcacat aattctccga aagcaaatgt cgtctccaaa atcgcctgat gacaaatcaa
     1801 agccggtatt gaaggacaag aatcctcaca attatagaaa agtaggattt tcaatgattg
     1861 taatttcggt atctcttgtg attattggat tagttgtttg gggaataggt agtgattatc
     1921 actttgcaag taatatcatg gctgctcaag aagtggatgc catgacacca aaagcaggtt
     1981 atcaaatagt tctctatgat tattcacaac caataggtgc aaaactaaag ttacttgatc
     2041 atgcagattc attggatgca gctcaggcat tacaacaaca gtatgtgcaa caaaataccg
     2101 atgccgccgg gcaagtactt gtctttggta cttcaaagga tgataacgta aacttgatgg
     2161 ctaatgcgga agtagcagca cagactccaa agcatgggta taacacaatt ctttttaaca
     2221 cagcttaccc agtgggcgca aaactaacaa atgtgaaaca tgatgaatca ctagcaaatg
     2281 ctactcaata tgaacaactt caagtggacc agaataagga ccccgatgtt aaagtactaa
     2341 tttttacacc agtttacacc gataatctga aggccgtaac aggttctagc gttcctgtcg
     2401 cagcttttgc cgcatttgca aatcagacaa gtgcggcagc aaatccaccg cctgcaacac
     2461 aaaaccctcc tgccgtagtc aataatacca atacaaatgt cccacctgta attgcatcaa
     2521 accaaaccgt cagtacatca aatcaaacag ccagcgcatt aaatcaaaca acaattgtat
     2581 caaatcaaac agggtctaat gttgaacaat cgagtgtaaa
//
LOCUS       DASPUS010000240        10773 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1077668, whole genome shotgun sequence.
ACCESSION   DASPUS010000240 DASPUS010000000
VERSION     DASPUS010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 10773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10773)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10773
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1077668"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(252..431)
                     /locus_tag="VEJ68_05715"
     CDS             complement(252..431)
                     /locus_tag="VEJ68_05715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06296.1"
                     /translation="MQSLTGLSSIISYKGSIFTLLIIAIVAIIALAILRFLIPLIIAG
                     IIIVVLLILVFGVIH"
     gene            564..1454
                     /locus_tag="VEJ68_05720"
     CDS             564..1454
                     /locus_tag="VEJ68_05720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06297.1"
                     /translation="MERRVNYKSTIVIYLKPMHVSKYSRLVAAISISLLLVSVLCGPI
                     RSVLADSSRDYIQTQEKLAEQQAQAYLNQLGQRSGYGQFNVNSTDETAMDRKAAIAQA
                     ELSLEQQGEQYLKQIVKPAVGNSNVTSTDENGTNRNAKIAQAELSLQEQDQQYLQITN
                     SSYSQLNATSTDETGSNRNADMAQAQLSIAEHIQQYLQNSTNINYGKLNATSTYEATA
                     ADQKTAIAQAELSLEQQGQQYLQHIATTRLGPPNATSTDENGKNRSADIAQAEAAMEQ
                     QAQALIEHMYPKLAQKEYGS"
     gene            1486..2307
                     /locus_tag="VEJ68_05725"
     CDS             1486..2307
                     /locus_tag="VEJ68_05725"
                     /inference="COORDINATES: protein motif:HMM:NF013117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HXX06298.1"
                     /translation="MQEQQTKLNNKSFLSEFKSLAIKTVILIVVVRVSLALFEVFFAQ
                     DFGLKHNHIIIGETIITISVSFVVVSSIRRVLKRNPAKMPPQFIANISFFSIVVISLV
                     STLILLYIWGVPPQTILVGGGVAAIVVGIGVSTIVGNLLSGALMLTTFPAKIGDSILI
                     INDNIHGTIEEISMLYTKINTENGAQYLVPNSAIIQGSVRMIREGVASEQLPYLEGDR
                     IEISNGSERFSGIVVNISSGFTTIQDEEKEIIIANRFVFEGKSIIIKKLKDRTKT"
     gene            complement(2422..2709)
                     /locus_tag="VEJ68_05730"
     CDS             complement(2422..2709)
                     /locus_tag="VEJ68_05730"
                     /inference="COORDINATES: protein motif:HMM:NF026297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HXX06299.1"
                     /translation="MSKQQYRSELGTISDIMYATMEGGKSGTIISTICRMANLSHHAA
                     TEKCQHLLDVGLIEQLSSEQNRIFAITEKGIRFYQELQQFKENIQEIKIRF"
     gene            complement(2938..3267)
                     /locus_tag="VEJ68_05735"
     CDS             complement(2938..3267)
                     /locus_tag="VEJ68_05735"
                     /inference="COORDINATES: protein motif:HMM:NF026297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HXX06300.1"
                     /translation="MKSGSFEQIASKEFSTVEDVALSEKTGKELRKIDWHIVKRLVVF
                     LYYDGKTKRTNIATSCNLGYDKCIRYLDWMKKMDLISKEHDKEGFELVSLNEKGMEIY
                     EKNFKEV"
     gene            complement(3445..4356)
                     /locus_tag="VEJ68_05740"
     CDS             complement(3445..4356)
                     /locus_tag="VEJ68_05740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06301.1"
                     /translation="MQREFAVVIIGVLTLLAASASAYGIMTLNTQIQANPDQTKMPDY
                     SAQLDLLSSQIDSIKNQLGMLSYLQNNVTDIHTKLIDLDNLKGNITNIQQQLINLEGK
                     NQGQQIASFTPSLTFVLDKSSYLPGNTIQITAIGAIPQNLIVIELLDSSQFVIMHQQA
                     YADSAGKATYNMQLATALLPGNYVLKLTSGQQVSSQPIQILSSGTSQSTTPTSNSILT
                     VQTDKSVYLTGEEIQVAGKAQPNTTVSSVMKSPTGVTYNSVTTADAGGLYNLFYSPLH
                     PYETGQWSITVSNLTTTTTVYITIQQN"
     gene            complement(4550..5068)
                     /locus_tag="VEJ68_05745"
     CDS             complement(4550..5068)
                     /locus_tag="VEJ68_05745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06302.1"
                     /translation="MKHGTMKKTDKLYASLSALSAVLLLSGALVVPSMSAFAVEQNFT
                     SDARKGPKGNDNNGNDNHDNNSCKCPNEKAISLLEQQRNILQNEKQIVTKFTNEQIQV
                     LKKEIQIATKQHNTKLVAALQAQIVNLQNQENTKLQKIDSQITQINAKIAQLKAQCED
                     FKKYCKKYSKQD"
     gene            complement(5363..6211)
                     /locus_tag="VEJ68_05750"
     CDS             complement(5363..6211)
                     /locus_tag="VEJ68_05750"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HXX06303.1"
                     /translation="MAIFLSVSNTHVQAQESNSTNATIPANLSENFTRQGITFFNEGN
                     YTEAITYYDAAIKLNSTNTYAIYNKALALDHLGLLDEAMANYGQVLKIMPNDTDSLYN
                     IAYDLDSLGQYKEATLYYDKVLAITPDDTDSLNNKGIDLARMGQPKDAIAYYEKAIAI
                     NPEDTTAIYNEGVAWQTLGNHSESITYFQRVLDIDPSNIDALNKLNLTYNNINKTQIS
                     TLQNIDKTSLVVVIGVFATLACGIIIIDRISKTRKNSDLQGSQVVDQTNEDTEKDLQE
                     NKETEI"
     gene            complement(6291..8105)
                     /locus_tag="VEJ68_05755"
     CDS             complement(6291..8105)
                     /locus_tag="VEJ68_05755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06304.1"
                     /translation="MISGNSTAILLGKDHHLSDIISSAIFVVILFFYVFSIGSYFQID
                     IAPLENRVNHHQPFFTYIFGKYVDELVIVCGTASWLALSLLKRLKIIIPAIYVGFTFL
                     GEVMGSTMLDMVVLLSLPVVLLLLGYNRFTAEKILNFPTRLVLCYLGILCAILATISL
                     IVSAAPLFSIQSNKIPVNDYAYDIFLLFGSFTPFLIFFLITGSSARLLLARPLNKILK
                     IERNPIFFSDKISKNTVPLLLLIMVLSIAISLVPHFPSVNSDNQEVGADSGDYVLMLS
                     QMTNSRDSSGFIHNAFVTVEGGDRPLFLIFLYGIYKIVPASPSYIADHLSVILAPALV
                     LSVFFLAREITSNYKMSLLSAFITAVSFQTLSSIYAGFYANSFSLVIGYFSLVFLIRF
                     LKKSGKANFIAYLSLLTSLVLSHVYTWTILTIVTSIFLILMYKQNQYERKRIIPLALV
                     VLLSVVIDVSRTVLTTAQGGISGDVALANTGAGFPQLDLLWSNLTTTMQDYGGGQFGN
                     FIVLGLGLYWLIRVDLREPMSLFLTIFLAIGTIPLLFGGQLIQFRVFYDIPFQIPAGI
                     ALACTGRRINWFMVLPVCIWLVAVSLRMVTNFYYVSPS"
     gene            8255..9160
                     /locus_tag="VEJ68_05760"
     CDS             8255..9160
                     /locus_tag="VEJ68_05760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010192803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HXX06305.1"
                     /translation="MDWKGDKKRIVVCIPGYNVAKMIRELVKECHKYASDVIVCDDGS
                     IDDTGIEAKRGGATVIKHPKNLGKGAAIKSLFNAAKDMQADLIVTVDGDGQFLPKEIN
                     KITKPIIEGNADIVIGYRFVENNEIPSYRKFGNMVLDKMTSMAAELPFRDTQSGFRAY
                     SGNAIQMINFDSDGFGADAEILVDASRKGLRITEEKVTVLYNTGERTSTKNPVSHTAE
                     VVNNLLELIALRRPLRYLGIPGVGLITLGIAFSIVVLTLFNHTRYFSIPWTLASMGFI
                     LIGIMLLLMSVVLFSIGRAIRKGYS"
     gene            9173..10225
                     /locus_tag="VEJ68_05765"
     CDS             9173..10225
                     /locus_tag="VEJ68_05765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_function: GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HXX06306.1"
                     /translation="MTFLDLSIINENDPGGMHQIYDKWAELAQTSYESKVDAIDFKDI
                     DHIVFAGMGGSGAIGDIFSSILSNTGVHVNVVKGYFLPKTVNSDTLVVTTSISGNTAE
                     ALTILDSAHKKNCKLIAFSSGGKMQEYCTKNRIEHRRFRQMHSPRASLPIYLYGMLKT
                     LEKILPIKRDEILESLKLMDELQKKINSSNLDEKNPALGIASWISTTPIIYYPFGLQP
                     AATRFKNSLHENAKMHVFLEEISEACHNQIVSWERPTSVRPILIEGQNDHIATKEKWK
                     ILKEYFGLNNIDYKEVFSVTGNLLTKLINLVYLLDYSSIYLATSLGVDPSPIYSLDFV
                     KHRQHIHSLEVINAKL"
     gene            complement(10300..10689)
                     /locus_tag="VEJ68_05770"
     CDS             complement(10300..10689)
                     /locus_tag="VEJ68_05770"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HXX06307.1"
                     /translation="MSKDLKVDQKVFFTGFVDNDEIEILFDMAQMALYVYQLSAAGSG
                     ALHFAAQHSIPVIVSKTDTFTEILKEDQAIFIEPDNEDQLGVAILKLASDEKLRNYLQ
                     HGIKKISSRTWRNVAEDYLTLYEEITG"
BASE COUNT         3486 a         1874 c         1977 g         3436 t
ORIGIN      
        1 tacatataaa aattgaaaaa gaatttcatg ccaattttga aaactttgat ggttcgataa
       61 tatgtcctta caatatcaaa aacttggaac aaaataacga tagttatagg atacgaaaac
      121 ttttcgacag tcatcattct gtgctttatg cccagtcttt tgaaggccgc gtcctcaaga
      181 tgtcctaaga taatatcttt taactcgact tacaaaacaa gatattgtga agttgatagc
      241 tgcagtatca tctagtggat cactccaaat accaagatca acaagactac aattattatt
      301 cctgctatta tcaatggaat caagaatcga agaattgcaa gtgctattat tgccacaatt
      361 gcaattatca acagagtaaa tatcgatcct ttgtatgata ttatgctact caacccagtt
      421 agtgattgca ttattgaaaa aagaatgatc aacgagatca aaacatgagg aaattctttt
      481 tctaaatctt aaagtttctc taatgaatta caacatgcta caaccgctaa ctcttctctt
      541 tttattaatc acgaagttta cgcgtggaaa gaagggtaaa ctacaaaagt accattgtaa
      601 tatatctaaa acccatgcat gtaagtaaat attcaagact tgtagcggca atttctattt
      661 cattattatt ggtatcagtt ctatgtggtc cgataaggtc cgtcttagca gacagcagca
      721 gagattatat acaaacacaa gagaagttag cagaacaaca agcccaagca tatcttaatc
      781 aacttggaca aaggtctgga tatggtcagt ttaatgtgaa cagtactgat gaaacagcaa
      841 tggatagaaa agctgctatt gcacaagcag aattatcatt agaacaacaa ggagaacaat
      901 atttgaaaca gattgtaaaa cctgctgtgg gaaattccaa tgttaccagt acagatgaaa
      961 atggaacaaa taggaatgcc aagattgcac aagcagaatt atctttgcaa gaacaagacc
     1021 aacagtatct acaaattaca aattccagtt atagccaact taatgctacc agtacagatg
     1081 aaacaggatc aaatagaaat gccgatatgg cacaagctca gttatctatc gcagaacaca
     1141 ttcaacaata tctacaaaat agcacaaaca taaactacgg caaactaaat gcaaccagca
     1201 catacgaagc aacagcagca gatcaaaaga ctgctattgc acaagcagaa ttatcattag
     1261 aacaacaagg acaacaatat ctgcaacaca ttgcaacgac tagattggga ccgccaaacg
     1321 ctactagcac agatgaaaat ggaaaaaata gaagcgcgga tattgcacaa gcagaagcag
     1381 ctatggaaca gcaggctcag gcattgatag aacatatgta tccaaagctg gcacaaaaag
     1441 aatacggttc ttgataaaag atccggatgt taatgtgatt acctcatgca agaacagcaa
     1501 acaaaactaa ataacaaatc atttctttcg gaatttaaat cccttgcaat aaagactgta
     1561 attttgatag ttgtggttag ggtaagcttg gcattatttg aggtattctt tgctcaagac
     1621 tttggactaa aacacaatca catcataatt ggtgagacga taataacaat atcagtatca
     1681 tttgtggtgg tttcctcaat caggcgtgtt ttgaaaagaa atcctgcaaa gatgccacca
     1741 cagttcattg caaatatctc gtttttttca attgtagtaa tatcactcgt ttccactctg
     1801 atactacttt acatatgggg ggtaccgccg cagacaattc tggttggggg cggggttgct
     1861 gccatagttg taggcattgg cgtttcgaca atagtgggaa accttctttc tggagccctc
     1921 atgctcacta catttccagc aaagataggc gattcaatcc tgataataaa tgacaacata
     1981 cacggaacga ttgaggagat aagcatgttg tataccaaga tcaatacaga aaatggagca
     2041 caatatctag ttccaaattc tgcaattatt cagggaagcg ttcgcatgat tagggaagga
     2101 gtggcaagcg aacaactacc atatcttgag ggcgacagaa tagaaatatc aaatggttct
     2161 gaaagatttt caggaattgt ggtcaatata tcctccggat ttacgacgat tcaagatgaa
     2221 gaaaaagaaa taattattgc gaataggttt gtatttgaag gaaaatccat cataataaaa
     2281 aaacttaagg atagaacaaa aacttgagta atcaattcga ataattttaa aattcaaaaa
     2341 tctatgaggt ataccttata atcgagtcta acagcattaa ccttcattca aatatgatta
     2401 tcttctctaa gtatatctgt cttagaatct aatctttatt tcctgtatgt tttccttaaa
     2461 ctgctggagc tcttgataaa atcttattcc cttttccgta atagcaaata ttcggttctg
     2521 ttcactgctt aactgttcta tcaatccaac atctagtaga tgttggcatt tttcagttgc
     2581 tgcatggtgt gaaagatttg ccatcctgca tattgttgat atgattgtgc cactctttcc
     2641 accctccatt gttgcataca tgatgtctga aattgtccca agttcggatc tgtattgttg
     2701 ttttgacatg tttctttgat tcctgtatca aataagaaat aaaattaatt ccatcattct
     2761 catcaatgag aatgatagtt agaaacataa tttaaattgc catatgaaaa ttgttttact
     2821 tgaaattata aaagcatgaa agtatatttg aggattctag attacaaagt taatctcatg
     2881 cattctcaat gaggtattgc atctatgttg tattcttaat gaaatcattt taaagattta
     2941 aacttcttta aagttcttct cgtaaatttc cattcccttt tcatttaagc ttactaattc
     3001 aaatccttcc ttatcatgct ctttgcttat caagtccatc ttcttcatcc aatcaagata
     3061 acgaatgcat ttatcatacc ccaaattgca actagttgca atattggtcc ttttcgtttt
     3121 gccatcgtaa tacagaaaaa ctaccagtct ttttacaatg tgccagtcaa tttttcttaa
     3181 ttcttttcca gttttttcac tcagagcaac atcttcaaca gtggagaact ccttggaggc
     3241 aatctgctcg aagctacccg atttcatggt aaccgtaaat ttctctaatc ttaataaaac
     3301 attgcgcatg tatcatacta atacaaaaac taactgcaag aatttacaag ggtgatattg
     3361 tatctgaaat atgcaaatct tgattctgga taagtttatc aaatgatgtg tttaatcttc
     3421 cgagacttcc aaaattgtgt caaattagtt ttgttgtatg gtgatgtata cagtagttgt
     3481 tgttgtaaga ttacttacag taatagacca ctgtcctgtt tcatatggat gcaatggaga
     3541 ataaaacaag ttgtataaac cgccagcatc tgcagtcgtg acagaattgt atgttacacc
     3601 tgtagggctt ttcataacac ttgagacggt tgtattaggt tgggcttttc cagctacttg
     3661 aatttcttcc cctgtaagat agactgattt gtcagtctgt acagtaagta tactatttga
     3721 tgtgggagtt gtactctgag aggttcctga tgaaagtatc tgtatgggtt gtgaacttac
     3781 ctgttgacct gaagttagtt ttagtacata atttcctgga agaagtgcag tagcaagttg
     3841 catgttatat gttgccttgc cagctgagtc tgcgtatgcc tgttggtgca ttattacgaa
     3901 ttggctgctg tcgagcaatt ctatcacgat tagattctgt ggtattgcac caatggcagt
     3961 aatttgtatt gtatttcctg gaagatatga tgacttgtca agtacaaatg taagacttgg
     4021 agtaaaagac gcaatttgtt gtccttgatt cttgccctcg agattgatta attgttgctg
     4081 aatgtttgtt atgttacctt ttaggttatc aaggtcaatt aattttgtat gaatgtctgt
     4141 tacattgttt tgcagataag ataacatccc caactggttt ttaattgaat caatttgtga
     4201 gcttagcaaa tccaattgtg ctgaataatc cggcatcttt gtttgatcag gatttgcttg
     4261 aatttgcgta ttgagtgtca ttattccata ggctgaagca gaagcagcga gcagtgttag
     4321 tacccctatt attacgacag caaactctct ttgcatattt ctctcctttt atggtgtccc
     4381 aagggacagc caacattctc tgggattttc acgccataag atcgttaatt tacaatataa
     4441 ggttcaggca gaattcatta gaataaatta ttctactcgg ggcatgttta ctgtctgagt
     4501 atatgttaaa ttaaaaaaat atggatgttg tccacattaa agctgacttt taatcttgct
     4561 tggaatactt tttacagtat ttcttgaagt cttcgcactg tgccttcaat tgggcaatct
     4621 ttgcatttat ttgagttatt tggctatcta ttttttgtaa cttcgtattt tcttgatttt
     4681 gcagattcac tatttgtgcc tgtaatgctg caactagctt tgtattgtgt tgttttgtcg
     4741 caatctgaat ctcctttttg agaacctgta tctgttcgtt tgtgaatttg gtcacaattt
     4801 gtttctcatt ctgtaggata tttctctgct gttctagaag cgagatagct ttttcgtttg
     4861 gacacttaca actgttgttg tcatgattgt cgtttccatt gttgtcatta cctttcggtc
     4921 ctttcctagc atcagaagta aaattctgtt ctactgcaaa ggcgctcatg gatggaacaa
     4981 cgagagctcc actcaacaac aatacggctg acaatgcgga caaggatgca tacagcttgt
     5041 ccgttttttt cattgttcca tgcttcatta tgctgatttc caaatttgga aatttaaggc
     5101 ttgctcacca tttagactat tgaaattttt ttgtatcgat ataaataaag atacatgtca
     5161 taatcaaaaa agacaatata attttctgat cgcgaaatta atttctaata gattttatct
     5221 tcaagaatta gataatattt ttgtaattct tgtattttag ttttagctgg tttagttaaa
     5281 atctgatata aataagatta tcatttattt ttttgctttg aatggtaaaa tgagtgagaa
     5341 aaacattaaa gttttttgca aattaaattt ctgtttcttt gttttcctgc aaatcttttt
     5401 cagtatcttc atttgtctgg tccacaactt gtgacccttg aagatccgaa ttctttcgag
     5461 tttttgatat tctgtcaatt atgatgatac cgcatgctaa tgtagcaaaa actccaatta
     5521 caacaacaag tgatgtctta tctatattct gtaatgtgct aatctgtgtt ttgttaatat
     5581 tgttataagt aagattcaat ttgtttagcg cgtcaatgtt tgatggatca atgtcaagaa
     5641 ccctttgaaa gtaagtaatg gactcactgt gattacctag agtttgccac gctacacctt
     5701 cattgtatat tgcagtggta tcctctggat taatcgcaat agctttttca taatatgcta
     5761 ttgcatcttt gggttgcccc attctggcaa gatcaatccc cttattgttc aacgaatctg
     5821 tgtcatctgg ggtaatggca agaactttat catagtataa agtagcttct ttgtattgcc
     5881 ccaagctatc taggtcatat gctatgttgt ataacgaatc tgtgtcattt ggcataatct
     5941 taagaacctg gccatagttt gccattgcct cgtcaagtaa tccgagatgg tcaagcgcca
     6001 gagctttgtt atagattgca taggtgttag tggagttgag ttttatcgct gcatcataat
     6061 atgttattgc ctccgtataa ttgccctcgt taaaaaatgt aattccttga cgggtaaaat
     6121 tttcagacaa attagcagga atagtcgcat tagtagaatt ggattcctgt gcttgtacat
     6181 gggtattact aacactgaga aatattgcca taaccaagag caaaacaaag atcaggaatg
     6241 atttcaatcg ttaggtatcc ctttttctgg gttgaaaatg ttgcgcatta ttacgatgga
     6301 gatacatagt aaaagtttgt gaccatcctt agcgataccg caacaagcca gatgcataca
     6361 ggtaggacca tgaaccagtt tatccttctg ccagtacaag ctaatgctat ccctgcaggg
     6421 atttgaaagg gaatatcgta aaatactctg aattgaatta attgacctcc aaataatagt
     6481 gggatagtcc ctattgctag aaaaattgtc aaaaaaagag acatgggttc acgtaaatct
     6541 actcgaataa gccagtagag acccaggcct agaactataa aatttccaaa ttgacctcct
     6601 ccatagtctt gcattgtagt agtaaggttg ctccataaca gatctaactg gggaaatcca
     6661 gctccggtat ttgcaagggc aacatctcct gaaattccac cctgggcagt tgttagaact
     6721 gttcttgaaa cgtcgattac tacagaaaga agaacaacta atgccagagg tattatcctc
     6781 tttctctcat attgattctg tttgtacatc agaatcaaaa atatggaagt tacgatcgtt
     6841 aagattgtcc atgtatacac atgactcaaa acaagagatg tcaataacga caagtatgca
     6901 ataaaattag ccttgccaga ttttttcaaa aatcgaatta aaaaaacaag tgagaaatat
     6961 cctatgacca gtgaaaatga attggcataa aatcctgcat atatgctgga tagagtctga
     7021 aaggagactg cagtaataaa tgctgacaaa agtgacattt tatagtttga tgtaatctct
     7081 cgtgcaagaa aaaatacgct caaaactaac gcaggtgcaa gtatgactga caagtggtca
     7141 gcaatgtacg atgggctggc aggtactatt ttgtatatgc catacaaaaa gatcagaaaa
     7201 agaggcctgt ctccaccttc cactgtaaca aatgcattgt gaataaatcc cgaagaatcc
     7261 cttgaatttg tcatttgtga caacatcaag acataatcac cgctatctgc gcccacttct
     7321 tgattatcac tgttgacaga agggaaatgt ggaaccagtg aaattgcaat tgataaaacc
     7381 atgattagta atagcaatgg gactgtgttt tttgatattt tatctgaaaa gaaaatggga
     7441 ttcctttcaa tttttaatat cttgtttaaa ggtcttgcca acagaagcct tgcagaagat
     7501 cctgtaatta gaaaaaatat caaaaatgga gtaaaacttc caaataacaa gaaaatgtca
     7561 taggcatagt cattgactgg tattttattt gattggatag aaaacagcgg agctgctgat
     7621 actattaggc tgatagtagc taaaatggca caaagaatac caaggtaaca tagaacaagt
     7681 cttgttggga aattcaggat cttttctgct gtaaaacgat tgtaacctaa aagcaataac
     7741 actactggca aggataaaag tactaccatg tctaacatag tagaccccat tacttctcca
     7801 agaaaagtaa atccaacgta tattgcaggt atgatgattt tcagtctctt caatagagac
     7861 aaggcaagcc aagaagccgt tccacatacg atgaccagtt catcaacgta tttgccaaaa
     7921 atgtaggtaa aaaatggctg atgatgatta acacggtttt caagaggtgc tatatctatt
     7981 tgaaaatacg aaccgatcga aaaaacgtag aaaaataata ttactacaaa gattgctgaa
     8041 gaaatgatat cagaaaggtg atgatctttg cctaaaagta tggcagtgct gttacctgag
     8101 atcatcttgc caccattgaa tcatgcactt tctattgatt accagtatta tgaaattata
     8161 aagtgtaagt attattcata ttgttacaaa tgctgtgctt acgtagtatt acatcgtaat
     8221 tgtgatatac ttgattttcg tttgattggt agaaatggac tggaagggag ataaaaaaag
     8281 aatcgtggtc tgtattcctg gatataacgt ggcaaaaatg attcgagaat tagttaagga
     8341 atgtcacaag tatgctagtg acgtaattgt atgcgatgac ggctccattg atgatactgg
     8401 aatagaggct aaaagaggtg gtgcaaccgt aataaaacac ccaaaaaatc tgggcaaggg
     8461 cgctgcaata aaatcacttt tcaatgctgc aaaagatatg caggcagatt tgatagtaac
     8521 agtagatggc gatggtcaat tcctgcctaa agagatcaac aaaattacta aaccaatcat
     8581 agaaggaaat gctgacattg taataggcta tagatttgtt gaaaataacg agataccttc
     8641 atacagaaaa ttcggaaata tggttcttga taagatgact agcatggcag cagagttgcc
     8701 tttccgagat acgcagagcg ggtttagagc ctattcaggt aatgctatac agatgatcaa
     8761 ttttgattca gacgggtttg gtgcagacgc tgaaatccta gttgacgcat caagaaaagg
     8821 attgagaatt acagaagaaa aagtcacagt tttatacaac actggagaaa gaacctctac
     8881 gaagaaccca gtttctcaca ctgccgaagt tgtaaataat ttattagaat taattgcact
     8941 gcgtcgtcct ttacgatacc ttggtatccc aggtgtgggt ttgatcacat tgggaatagc
     9001 tttttcaata gtagttctca cacttttcaa tcataccaga tacttttcaa ttccatggac
     9061 gcttgcctcg atggggttta ttttgatagg aataatgctc ctcttgatgt cagtagtttt
     9121 gtttagcatt ggcagagcaa ttcgaaaagg atattcataa cgtaataagg ctatgacatt
     9181 tttggatcta tctatcataa atgaaaatga cccaggggga atgcatcaaa tttatgataa
     9241 gtgggctgaa ttggcacaaa catcttatga atcaaaggta gatgctattg atttcaaaga
     9301 tatagatcat atcgtgtttg ccggaatggg tggctccggt gctattggag atatcttttc
     9361 ttccatactt tcaaacactg gtgttcatgt taatgtagtg aagggatatt ttcttccaaa
     9421 aactgtcaat tcagacactt tagtggtaac tactagtata tctggaaata ctgcagaagc
     9481 tcttactatt ttagattcgg cacataaaaa gaactgtaaa ctgattgcct tttcttctgg
     9541 tggaaaaatg caggaatatt gtacaaaaaa tagaattgaa cacagacgct ttcgtcaaat
     9601 gcattctccc agagcctcgc tcccaatcta tctgtatgga atgttaaaga ccctagaaaa
     9661 aatacttcct atcaaaagag atgagattct tgaatctcta aaacttatgg atgaactaca
     9721 aaagaagata aattcctcca atctggatga aaaaaatcca gctctgggta tcgcatcttg
     9781 gatttctaca acaccaatta tctattatcc attcggattg caaccagctg ctacaagatt
     9841 taaaaactca cttcatgaga atgcaaagat gcacgttttt ttagaggaga taagcgaagc
     9901 atgtcataat caaatagtat cttgggaaag acctactagt gttagaccaa tcttgataga
     9961 aggacaaaat gaccacatag caaccaaaga gaaatggaag atactcaagg aatattttgg
    10021 actaaataat attgattata aagaagtttt ttcagttaca ggaaaccttc tgaccaaatt
    10081 aattaattta gtttatttac ttgactattc tagcatctat ttggctacca gtctaggagt
    10141 ggatccttct cctatctact ctcttgattt tgtaaagcat agacagcata ttcatagctt
    10201 agaggtcatc aacgcaaaac tttgagaatg tacaaaattc ttatcaacgc ttaacatttt
    10261 ttttgaaaag atttttttaa ctaattttgg atgagatgtt taacctgtta tttcttcgta
    10321 aagtgtaaga taatcctccg ccacgtttct ccatgttcga ctgcttattt tctttatacc
    10381 atgttgaaga taatttctta atttctcatc acttgctagt ttgagaattg caactcccaa
    10441 ttgatcttcg ttatcaggtt ctataaatat ggcttgatcc tcttttagaa tctcggtaaa
    10501 ggtgtcggtt ttgctcacta ttactggtat gctatgctga gcagcaaaat gtagggcgcc
    10561 agaacccgcc gctgaaagtt ggtacacgta aagagccatt tgagccatat caaaaagaat
    10621 ctcaatttca tcattgtcaa caaagcccgt gaagaatact ttttgatcta cttttagatc
    10681 ctttgaaatt tgtcagagca tgtcctcata atattgaaat tcaggactgg actttcctgc
    10741 tatcactagg atgtgatttg gcaatttttc atg
//
LOCUS       DASPUS010000241         5018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_534159, whole genome shotgun sequence.
ACCESSION   DASPUS010000241 DASPUS010000000
VERSION     DASPUS010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5018)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5018
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_534159"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2198
                     /locus_tag="VEJ68_05775"
     CDS             <1..2198
                     /locus_tag="VEJ68_05775"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HXX06308.1"
                     /translation="LLIVFLISGIISFFTALTYAELGSAFPEAGGGYRWVREGLPRPN
                     AFISGWIAWFAHMIAGSLYAVSIGDFFGGFLTSVGVAAEYGGIPLGKIIAVISIIIFT
                     YVNYRGVSLTGKVGNGLTITQLVIIAVLIVAGLFTMAFFNPHWAVNFQHLAPKGITGF
                     ILAMGITYIAFEGYEIIVQAGEEVKNPKKNIPKAIFIALGVVTVLYIVFTFAFLGGLN
                     SSILGKEVWQYIGDYQDAGIAQAAQHLIPYGTIVVFAGGMISSVAALSATTFSSSRVS
                     YAMGRQYNLPYIFSSIHTKYHTPHFAIIVSGVIMLIMATWLPLEQIAIVAGVMFLFLF
                     TQVNWAGINIRRLYGHKLDYGFKIPLFPLMPIIGIICKAGLAIFLLIYDPLSWAIAIV
                     WILIGFSVYKLYIAKREIEHYAPLVANMGPPERKDYRIMVVFNKKTVDKLVKIASAIA
                     KDKDGEISLLNVATIPLQIPLSMAHGFAEPIMKSFDELKKKPGYLEYRYLVRLSHDTT
                     EAILATAEEQGINLLVMDFFDLRDNRKLMTLSTCDVIGINIKKEFEKELSHIVVAYDK
                     GRHSDLGLEIAHSFSKSLDSKIRIVRGIVESPEDERDILSRINEKMFDLDLKKVPVER
                     IYPTSIDVTRDLLENLNKDPEVVIIGAGNQPEQAFSPKTLEIVAKSRFSVFVVRNSRL
                     SDIKARYFWHMIAPRIRENRFVYKIYNTVLQLVKSRKRVSDEEYFSPKI"
     gene            2525..2815
                     /locus_tag="VEJ68_05780"
     CDS             2525..2815
                     /locus_tag="VEJ68_05780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06309.1"
                     /translation="MSGLVISLSIYRIRLGENIKKSGTGFLGSMIGTSAGACSCGPIG
                     FAAVSAFGTTGATATSFLTNYDLPIRLVSIGILVCAYYFAIKGISRQCKISR"
     gene            3067..3414
                     /locus_tag="VEJ68_05785"
     CDS             3067..3414
                     /locus_tag="VEJ68_05785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06310.1"
                     /translation="MKCDEEYSALVKATEKLHDLYYQQETADTQFSNALRAAENHLIA
                     AGLVRLVNATPAEIIYSLEESSEKNFSSLHEAAVAKSQVDVKAAAAEELFQYASQRYE
                     TCLKENAKDENSN"
     gene            complement(3448..3852)
                     /locus_tag="VEJ68_05790"
     CDS             complement(3448..3852)
                     /locus_tag="VEJ68_05790"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HXX06311.1"
                     /translation="MEAGDSDLYFKAGNDNMVKENYEDAILNYDKAIEINPSFVSAWN
                     NKGIALSRLKRYEDAINCYDKAIAIEPRHANAWYNKAKAYRDMGQSRLDKANEDRTRA
                     AKLINESLVFFDTANECYDKGDALSKEQGQSH"
     gene            3935..4351
                     /locus_tag="VEJ68_05795"
     CDS             3935..4351
                     /locus_tag="VEJ68_05795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HXX06312.1"
                     /translation="MTDATLRNSKLHDLSHFGLRIVVGVFFMVHSGQKFSPMFQGFLT
                     SVGLPGEMAILIGLLELVGGALLVVGVLSRIAGALLAIDMLGAMIYIKKIESFSGRNG
                     IELELLAFIILLTVIVLGPGRISISHIVKRIPRFLQ"
     gene            complement(4395..4529)
                     /locus_tag="VEJ68_05800"
     CDS             complement(4395..4529)
                     /locus_tag="VEJ68_05800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016939635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06313.1"
                     /translation="MKTKKSKVEEERLEAEHEQAKEELHQAELGEGYEQDEKYEESED
                     "
BASE COUNT         1565 a          894 c          993 g         1566 t
ORIGIN      
        1 cacttcttat cgtatttcta attagtggaa ttattagttt ttttacagca ctaacatatg
       61 ctgaactagg atctgcattt cccgaagcag gcggtggata caggtgggta agagaaggtc
      121 tcccaagacc aaatgcattc atcagcggat ggatagcatg gtttgctcac atgattgcgg
      181 gcagtcttta tgccgtttca attggtgatt tttttggagg ctttcttaca agtgttggcg
      241 ttgccgccga atatggcgga ataccgctag gaaaaatcat tgcagtgatt tcaataataa
      301 tttttacata tgtgaattac cggggagttt cacttacagg aaaagtagga aacgggctta
      361 caatcacgca gcttgtaata attgcagtcc tgatagtagc tggattgttt accatggctt
      421 ttttcaatcc ccattgggca gtaaactttc agcatcttgc tccaaaagga ataaccggtt
      481 ttattttggc aatgggaatt acgtatattg cttttgaggg ttatgagata attgtacaag
      541 ctggagaaga ggtaaaaaat ccaaagaaga acattccaaa ggcaattttc attgctcttg
      601 gggttgtgac tgtgctctac atagttttta ctttcgcctt tcttggagga ttgaacagct
      661 ctattcttgg aaaggaggtc tggcaataca ttggcgatta tcaagacgcc ggaattgcgc
      721 aagcagctca acatctcata ccatatggaa ctatcgtggt atttgcagga ggaatgatct
      781 caagtgtggc agctctgagt gctacaacat tctcatcaag cagggtatct tatgcaatgg
      841 gcaggcaata caacttacca tatattttca gctctattca taccaaatat cacaccccac
      901 attttgcaat aatcgtttca ggtgttatca tgttgataat ggcaacatgg cttccattgg
      961 aacagattgc aattgttgca ggagttatgt tcctgtttct cttcactcag gttaactggg
     1021 caggaattaa tattcgaaga ttatacggcc acaagcttga ttatggattt aagattcctc
     1081 tgtttcctct catgccaata attgggatta tttgtaaagc aggacttgca atttttctcc
     1141 tgatatacga tccgcttagc tgggcaattg caatagtatg gattctcata ggattttcag
     1201 tatacaaatt gtacattgca aaaagagaga tagaacacta tgctccttta gttgcaaaca
     1261 tgggccctcc ggaaaggaag gattaccgca taatggttgt ttttaacaag aagaccgttg
     1321 ataaacttgt aaagattgca tctgcaatag caaaagacaa ggacggtgaa atttctcttc
     1381 ttaacgtagc tacaataccg ctccagattc cgctgtccat ggcacatggc tttgctgaac
     1441 cgatcatgaa atcttttgat gagctaaaaa agaaacctgg ttatctggaa tatcggtatc
     1501 ttgtcagact gtcacatgat acaacggagg caattcttgc taccgcagag gaacagggaa
     1561 taaaccttct tgtaatggac ttcttcgatc tccgagacaa tcgaaaattg atgacccttt
     1621 ctacctgcga tgttattggg ataaatatca agaaggagtt tgaaaaggag ctttcacata
     1681 ttgtagtagc atatgacaaa ggaagacact cagacttggg gcttgaaata gcacattctt
     1741 tttcaaagtc cttggatagc aagataagaa ttgtaagagg aattgtagag tcgcctgaag
     1801 acgagcggga tatcttgagc agaataaatg agaaaatgtt cgatcttgat cttaaaaaag
     1861 taccagtaga aagaatctat cccacaagta tcgacgtaac aagagatctg ctggaaaacc
     1921 tgaacaaaga cccagaggtt gtaataattg gtgccgggaa tcagccagag caggccttca
     1981 gcccaaaaac attggagata gtagcgaaat cgcgtttcag cgtatttgtt gtccgtaatt
     2041 ccagactttc tgatatcaag gccagatatt tttggcacat gatagcccca agaataagag
     2101 agaacaggtt tgtctataag atatacaaca cagttcttca attggtaaaa tcaaggaaga
     2161 gagtatcaga tgaggaatat ttttctccaa aaatctaatc tgtacaaaaa aagtccaaaa
     2221 gaaatccgct ttaattgtta gtagtaatat cgtctattta atgcgctgtc agtctcaaac
     2281 atgcttaaga ataacagatt cttataaata attcctagta catagattac ctagtttgca
     2341 aatacaggca ttaacactag tcttttcgaa tcacaaatac attgcattat cagttggaat
     2401 ttttgtatca ttgttttttt ttctctcaat cacgtcgcaa tttatttttc tacagccaaa
     2461 ctttttattt tatgttccaa gtgatgaaat tcttaatttc tctttaattg tcctgatagc
     2521 ttccatgtca ggacttgtta tcagccttag catatatcgt ataaggctgg gcgagaacat
     2581 aaaaaaatcc ggcacaggct ttctgggatc aatgattgga acgagtgcag gagcttgcag
     2641 ttgcggcccc attggatttg ctgcagtatc agcatttggc acaacaggag ctacagctac
     2701 ttcgtttctt accaattatg atcttcccat aagactggtc tcaattggaa ttttggtctg
     2761 cgcatactat tttgcaataa aaggaatatc aagacagtgt aaaatcagca gatagttttt
     2821 ttcatatctg aattttttga ccacaaagag atctgtttgt caatttattc cttaaatagt
     2881 aattttacaa caaacattga aaatgccgta cgaagaggtc tatttacaac gattgaaaga
     2941 agaaaatcca gaagaataca gcaaaattga agaaaactag ccaatttcta aagtaggcgg
     3001 aagtttactc cgaaatttac ctaaaacaat taagatgtag tatgaattag aaaatccgag
     3061 ccgaacgtga aatgtgatga agaatacagt gcgctagtaa aagcaactga gaaactccat
     3121 gatttgtatt atcaacaaga aactgcagat actcaatttt caaatgcgtt aagagctgcc
     3181 gaaaaccatc taatcgcagc aggacttgta aggctagtta atgcaactcc tgctgagatc
     3241 atttattctc ttgaagaaag ttctgagaaa aatttttcct ccctacatga ggcagcagta
     3301 gcaaaatctc aagtggatgt caaagcggct gcagctgaag aattatttca gtacgcatca
     3361 caaagatacg aaacttgttt gaaagaaaac gcaaaagatg aaaattccaa ttaatacaag
     3421 aattttatta gatctgacca aatgtttcta gtggctttga ccttgttctt ttgataatgc
     3481 atctcccttg tcatagcatt cgttagcagt atcaaagaaa acaagggatt cattgatcag
     3541 ttttgccgca cgcgtacgat cttcatttgc cttgtctaga cgcgattgac ccatatctct
     3601 gtaagctttg gctttgttat accaagcatt tgcatgacgc ggctctatcg caatagcctt
     3661 gtcatagcaa tttattgcat cttcataccg ctttaatctg gacaatgcaa ttcctttgtt
     3721 attccatgca cttacaaaag atgggttaat ctcgattgcc ttgtcatagt ttagtattgc
     3781 atcttcataa ttttctttta ccatgttatc gttgccagct ttaaaataca aatcagaatc
     3841 acctgcttcc ataccaattt gtaccctatg ggttatttta agtccaagaa atattgcgac
     3901 agatacatat tatgaaccaa agtgagattt acaaatgacc gatgcaactc tgagaaatag
     3961 caagcttcat gatcttagcc attttggatt acgtatagtg gtaggtgttt ttttcatggt
     4021 acatagtggt caaaaattta gccccatgtt ccagggattt ttaaccagtg tcggtctacc
     4081 aggcgagatg gcaattctca taggattgct agagttggtt ggaggcgcat tgcttgtagt
     4141 aggcgtatta tctagaatag caggcgctct tcttgcaata gacatgttag gagcaatgat
     4201 atacataaaa aaaattgaat cattctcagg aaggaatggt atagagttgg agttactcgc
     4261 gtttattatt ttattgacgg ttattgtatt gggacctggc aggatatcaa tatcacatat
     4321 tgtgaaaaga attccaaggt ttctccagta gatagtttat tgtagtatta caaatttttt
     4381 aatgcaaagt acgattaatc ctcggactct tcgtattttt cgtcttgctc atagccttct
     4441 cctaattctg cttgatggag ttcttctttt gcttgctcat gttccgcttc taatctttct
     4501 tcctctactt ttgacttctt ggttttcatg atgttatgtt aacaccagta taatattaga
     4561 agattctaga ttatcagaaa tgaaaatcgc tttgtctttt gttattttaa aatcaattga
     4621 aaacaggaag gaaatcatgg gttgtaggag tacatgtttg catacacata tgcccaatgt
     4681 tttccttcca gaagacaaat cttttacata attttttagc atacagttga ttctcattac
     4741 tgataatcag ctctgtcctt ttatatgaaa aatataacct caatgaataa ttttgattca
     4801 agaaagtaag aaccctgatg atgacagcgg agatgataac gaattaaggt ttgaagatgg
     4861 gtctgaaagt aaagagtggg aagaatacta tgaatcaaaa agcaggaaat ggaggaacca
     4921 aaattatgac ggttaaaaaa tgcgagaact gcggtaaagc attagatggt tttcttgcaa
     4981 cccattgttc tgacaaatgc atctttgaaa gtataaag
//
LOCUS       DASPUS010000242         4056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_804493, whole genome shotgun sequence.
ACCESSION   DASPUS010000242 DASPUS010000000
VERSION     DASPUS010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4056)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4056
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_804493"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..220
                     /locus_tag="VEJ68_05805"
     CDS             <1..220
                     /locus_tag="VEJ68_05805"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsJ-like methyltransferase family protein"
                     /protein_id="HXX06314.1"
                     /translation="RQISLNYSASKIMDHVLARKGNALFKVFDGEYSNEFRDYLKKKF
                     IKVQLKKPKASRKTSSELYFICLGYLGN"
     gene            complement(217..1347)
                     /locus_tag="VEJ68_05810"
     CDS             complement(217..1347)
                     /locus_tag="VEJ68_05810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010190615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanine-N1)-methyltransferase"
                     /protein_id="HXX06315.1"
                     /translation="MESEFVKTVEGNTKLLVPKDSLTEKSPPREPAFFNPRAKISRDF
                     SVIAYSAFLKKYKGPKVFLDSLAGIGARSIRVANEVNEIEQVYANDINPKALDMARQI
                     AKLNNVTRCEFSENEACRFLSLHSKREHRGAIVDIDPFGSPSRYIDCGIRATSHGGLL
                     SVTATDLTVLHGLFPEACKRKYYGIPVRTEYGNEIALRLIIGCIHLIAGRLDVKIIPL
                     FVQNNMHYYKAYVKVLVRTSGDEGMGFVLHCKNCGNREVLREPADTCKVCDSKVEIGG
                     PLWIGEIFDKDFVNDMLDDEKNFQVDKSCRKILEKCQKEIGMPPLYYTIDEIAHKKQS
                     APISLAKTIEKIQKAGFRASSTSFNPSAFRTDARIDEILSII"
     gene            1403..2023
                     /gene="rnhB"
                     /locus_tag="VEJ68_05815"
     CDS             1403..2023
                     /gene="rnhB"
                     /locus_tag="VEJ68_05815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HXX06316.1"
                     /translation="MLVCGVDDAGRGSVLGPLVIAGILVERAKIKDLSKIGVKDSKLL
                     SPHSRETLYKKIISIVDDYYVARISPTIIDRSVSKNKLNDLEAKYMAKVIQRLKPNSA
                     YVDSCDVNPTRFGIQISKLAKIKKIHSSHHADRRFPVVSAASIIAKVNRDRAIEKLRI
                     DGDVGSGYPSDSKTMNFIRRHIELNGSPPKFARKSWKPVKIMLNQM"
     gene            complement(2026..2730)
                     /locus_tag="VEJ68_05820"
     CDS             complement(2026..2730)
                     /locus_tag="VEJ68_05820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibrillarin-like rRNA/tRNA
                     2'-O-methyltransferase"
                     /protein_id="HXX06317.1"
                     /translation="MTGRDLNEGNLENEEGNIFWVKIEGEKKLATLNLVPGNQVYKEK
                     LVKISDEEFRAWDPFRSKLGAAIMNGLSILPIVRKSKVLYLGVSTGTTASHVSDIVGP
                     SGIVFSVEHTSRVAREFLDRVASYRSNIVPILQDARNPKEYFSVYGIVDVVYVDIAQP
                     DQTEIAIMNCKAYLKKEGYLMLVIKTRSIDVTKDPSEIVRNEIKKLKENFEVIQEINL
                     EPYEKDHSIIIAKFLG"
     gene            complement(2681..3931)
                     /locus_tag="VEJ68_05825"
     CDS             complement(2681..3931)
                     /locus_tag="VEJ68_05825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013481818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HXX06318.1"
                     /translation="MHSVILTELGIAVFDNNKCVKSIPFTNPARDYIELKKEKANIAD
                     LEEFLSKLTTGVSVNDTSLLKLLKKRSIESDMMEQNKIETIQSSKLRVLIDSSFAKDE
                     NDAREKLRNFAMQLSSSKVTEVSESPDLHIIQAISTLDETDKIANLLSSRLREWYGLH
                     FPELDNLIDTISGYSKIVLAGRREDLTRQTYLDAGFPEEKAEMLSLIQGKSRGGQLSN
                     ENLTIVQSLARQILQLFELRNTLEKHIETQMVAIAPNISGILGTSVGARILARAGSLK
                     RLASMPASTIQVLGAEKALFRSLKTGAQPPKHGLLFQHTLVHAAPRWQRGKIARAIAA
                     KAALAARVDVYGAGRNEMLFEKLNVRVAEIGEKYKEAPERPPQIQSRRPMERDFRRRD
                     TGRQRDKKSDWQRSKRRKFGKRRR"
BASE COUNT         1152 a          810 c          705 g         1389 t
ORIGIN      
        1 ccgtcagata tcgctaaact attctgcaag taagataatg gatcatgtgc ttgcacgcaa
       61 aggcaacgca ctctttaagg tctttgatgg cgaatactct aatgaattta gagattatct
      121 gaaaaagaaa ttcatcaaag ttcaactaaa gaaaccaaag gcaagcagaa aaacaagtag
      181 cgagttatac tttatctgct tgggatatct tggaaactag attattgaga gaatctcgtc
      241 tattcttgca tcagtcctaa atgctgaagg gttgaaactt gtagaactag ctctaaatcc
      301 tgctttttga attttctcaa ttgtttttgc tagggagata ggagcggatt gttttttgtg
      361 cgcaatttcg tctatggtat agtatagcgg tggcatacca atttcttttt gacacttttc
      421 caagattttt ctacacgatt tatctacctg aaaatttttt tcatcgtcta gcatatcatt
      481 tacaaaatcc ttgtcaaaga tctctccaat ccaaagtgga cctccaatct caactttaga
      541 gtcacaaacc ttgcatgtgt cagccggctc tcttaggacc tctctatttc cacaattttt
      601 gcagtgtagc acaaaaccca ttccttcatc accactcgtt cttacaagaa ctttgacgta
      661 tgccttgtag tagtgcatgt tattttgtac aaacaaagga attatcttta catccaatct
      721 tccagcaatt agatggatgc atcctatgat taatcttaaa gcaatttcat taccgtattc
      781 agttcgtacg ggaattccat agtattttct tttacaggcc tcgggaaata atccatgcag
      841 taccgtaagg tctgttgcag taacagaaag tagccctcca tgagatgttg ctctaatgcc
      901 acaatcgata taccttgatg gagatccaaa tggatcaatg tctacaatgg caccccgatg
      961 ttctcgtttg gaatgcagac tgaggaatct gcatgcctca ttttcagaaa attcacacct
     1021 tgtaacattg tttaattttg caatctgtct tgccatgtcc aacgcttttg gatttatgtc
     1081 atttgcatag acttgctcaa tctcatttac ttcatttgca actcttatgc ttcttgctcc
     1141 aatacctgca agtgagtcca gaaagacttt gggacctttg tattttttca aaaatgcaga
     1201 gtatgctatt acagaaaaat ctctactaat ctttgctctt ggattaaaaa acgcgggttc
     1261 tctaggaggt gacttttctg ttaacgaatc ttttggcact agaagctttg tatttccttc
     1321 tactgtcttt acaaattctg attccaacac atgtgggata atctaaaatg atttaataca
     1381 tctagcgcaa cactgactcc aaatgctagt ctgtggagtt gacgatgcag gacgcggctc
     1441 agttctaggt ccgcttgtta ttgctggcat attagtagaa cgtgccaaaa tcaaggacct
     1501 ctccaaaatt ggagtaaaag attccaaact gctttctcca cattcaaggg agaccctgta
     1561 caaaaaaata atttccattg ttgatgatta ctatgtagca agaatctctc ctacgataat
     1621 cgataggagt gttagcaaaa ataagctaaa tgatcttgag gccaagtata tggctaaagt
     1681 tattcaaaga ttaaaaccaa attcggcata tgtagattcc tgcgatgtaa atcccactag
     1741 atttggaata cagatatcaa aacttgcaaa aataaaaaaa atccattcaa gtcatcatgc
     1801 agacaggagg tttcctgtgg tctctgctgc ctctattatt gctaaggtga atagagatag
     1861 ggcaattgag aagttaagaa tagatggtga cgtgggaagt ggttatccat cagattcaaa
     1921 gactatgaat ttcattagaa ggcatattga attaaatggt tctccgccaa aatttgcaag
     1981 aaagagttgg aaaccggtaa aaataatgct aaatcaaatg tgagcctagc caagaaattt
     2041 tgcgataatt atgctatggt ctttttcgta tggttctagg tttatctctt gaatcacttc
     2101 aaaattttcc tttaattttt ttatttcatt acgaactatc tctgagggat ccttggtaac
     2161 atcaatactt cgagtcttga taacaagcat cagataacct tcctttttca aatatgcttt
     2221 acaattcatg atagcaatct ctgtctggtc tggttgagca atgtctacgt aaactacatc
     2281 aactataccg tagactgaaa aatattcttt tggatttctt gcatcttgta aaataggaac
     2341 tatgtttgat cgatacgatg caactctgtc aagaaattct cttgctactc tacttgtgtg
     2401 ttctacacta aagacaattc cactgggacc aacaatgtct gaaacatgac ttgctgttgt
     2461 accagttgaa actcccagat acaatacttt ggactttcta acaatgggaa gtatggacaa
     2521 accattcatt atagctgcac caagtttact tctaaatggg tcccatgccc taaactcttc
     2581 atcacttatt tttactaatt tttctttgta tacttgattt cctggcacta gatttaatgt
     2641 tgctagtttt ttttctcctt caatttttac ccagaaaata ttaccttctt cgttttccaa
     2701 atttccttcg tttagatctc tgccagtcac tctttttgtc tctttgtctt cccgtatccc
     2761 gacgtcggaa atctctttcc attggtctac gggattgtat ctgtggaggt ctttctggtg
     2821 cttccttgta cttttctcca atctcggcaa ctcttacgtt caatttttca aagagcatct
     2881 catttcttcc tgcgccgtaa acatctactc tggcagccaa tgcagctttt gctgctatag
     2941 ctcttgcaat cttgccgcgt tgccatctag gggcagcatg gaccaaagtg tgctgaaaca
     3001 ataaaccatg ttttggtggc tgggctccag ttttgaggga tctgaataat gctttttctg
     3061 ctcccaagac ttggatagta cttgctggca ttgatgcaag tctctttaga cttcctgctc
     3121 ttgcaagtat tcttgcccca actgatgttc ccaaaattcc agatatgttt ggagcaattg
     3181 caaccatctg tgtctcgatg tgcttttcta gagtgtttcg taattcaaag agttgtaaaa
     3241 tttgtctagc aaggctttgc acaatggtca aattctcatt agacaactgg ccacctctgc
     3301 tttttccttg tatgagagat aacatctctg ccttttcctc aggaaatcct gcatcaaggt
     3361 atgtctgtct agtaagatct tctcttcttc ctgctagaac tatcttagaa tatccactta
     3421 ttgtatctat gaggttgtca agctctggaa aatgaagacc ataccattct ctaagtcttg
     3481 agcttaacaa atttgctatc ttatctgttt catccaacgt acttattgct tgaattatgt
     3541 gtaaatcagg actttctgaa acctcggtga ctttggagga tgagagctgc attgcaaaat
     3601 ttcgcaattt ttctcttgca tcattttcat cttttgcaaa ggatgaatct atcagaactc
     3661 gtaactttga agactgaatt gtttctattt tattttgttc catcatgtca gattctattg
     3721 atcttttctt tagaagtttg agaagactgg tatcatttac tgatacacct gttgttaatt
     3781 tactgagaaa ttcttctaaa tcagcaatgt ttgccttttc tttttttaat tcaatgtagt
     3841 ctcttgctgg atttgtaaaa ggaatagatt ttacacattt gttattgtca aaaactgcta
     3901 tgcctagttc tgtcaaaatt acagaatgca tacaaggcat tttcatgtct tactaaaaaa
     3961 ggtaacattg gtggaaacca tgcatcaacc gttataagac aaccattttt aataattaga
     4021 agtgaatccc gacatctcaa caaatgttgg tccaat
//
LOCUS       DASPUS010000243         2026 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1770492, whole genome shotgun sequence.
ACCESSION   DASPUS010000243 DASPUS010000000
VERSION     DASPUS010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2026)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2026
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1770492"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..895
                     /locus_tag="VEJ68_05830"
     CDS             <1..895
                     /locus_tag="VEJ68_05830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Lhr helicase"
                     /protein_id="HXX06319.1"
                     /translation="LSAKTGYLVDSRSDAYRIMMSSNGRILEEAVVNVLKDDYDLTSI
                     VRASLTGTHNINWRTWCVAKKFGIVGRGAVYDRKSARFLYERYSTTALAREALRELFH
                     DKYDLEGASRILSSIRDGKISFKWIEVDGFSKLAEPILDHTTKYYSSPANLDKGVLDL
                     VRSRLLKTKHRLVCLRCGKWERVVETNEVKGILACPHCKSRQIGATFYSDYDLSKITQ
                     KKIAGKKITAEENHKFNRAWKVSSLLENFGNTALIVLSGYGIGADTGARILRNMIGEQ
                     ELYRQIYEAERQYVMTRGFWD"
     gene            complement(892..>2026)
                     /locus_tag="VEJ68_05835"
     CDS             complement(892..>2026)
                     /locus_tag="VEJ68_05835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HXX06320.1"
                     /translation="RQFSRKDGSQFLLRNMTVYDGDSRAKVKLWDEKANLPGIDNLKP
                     GDLIKIIKAYVKSDMKGNPIINVGSGSTIEPNNTQSKIPDLDAITEDVSDVKDNQQNL
                     VVSGILDGNIRTTEFTNFRGEQGKSLQFRLKGKDGKPIRTVLWNTDESAMPKMISPDA
                     KTRLIGVKTKSGQQGLELHGDEGTMIEIEGTREINPIMVRILSVTKSDSGSTLLLGVM
                     QDKKVVNIVDASSITGDLKSGEVIECMPSKIYGSSVTLEGNSFVRKIVDDKIPTLSQI
                     RTRIKDIKPNNDTYCIEAIILKLPEKREVQTKSGESISLSETFIEDDTGQIWLKGWRA
                     QARLLEQFTQGEIVSVTGVTAKPGLEGRTELFLTSFSVVTRKN"
BASE COUNT          558 a          415 c          412 g          641 t
ORIGIN      
        1 gctctcagca aaaactggtt atcttgtaga ttctaggtca gatgcatatc gaatcatgat
       61 gtcttcaaat ggacgaattt tggaagaagc agttgttaat gttctaaaag atgattacga
      121 tttgacctca attgtacgcg cctcccttac aggtactcat aacataaact ggagaacgtg
      181 gtgtgtggca aaaaaatttg gaattgtagg aagaggggca gtctacgacc gcaagtctgc
      241 aagattcctt tatgaaagat actctacaac tgccttggct agagaagccc taagagaact
      301 ctttcatgat aaatacgact tggaaggagc atcgcggatc ctttctagca taagagatgg
      361 gaagattagt tttaaatgga ttgaagttga tggcttttca aaacttgccg aacctatatt
      421 ggatcatact acaaagtact actcttctcc tgcaaacttg gacaagggag tactggattt
      481 agtaaggtcc cgccttttga agacaaaaca taggcttgtt tgcctgcgtt gcggcaagtg
      541 ggagcgggta gttgaaacaa atgaggtaaa aggaattctt gcatgtccac actgtaaatc
      601 acgacagata ggtgctacct tttattctga ttacgatctt tcaaaaataa cccaaaaaaa
      661 gattgcagga aaaaagatca ctgcggagga gaaccacaaa ttcaatcgtg catggaaagt
      721 ttcttcactt ttagaaaact ttgggaatac tgcactgatc gtactttcag gttacggcat
      781 tggcgccgat actggggcaa gaattttaag aaatatgata ggcgaacaag aattgtaccg
      841 tcaaatttac gaggcggaaa gacaatatgt catgacaaga gggttttggg actagttttt
      901 tcttgttact accgaaaatg aggtcaaaaa cagttcggtt cttccttcaa gacctggctt
      961 tgcggtaact ccggtaacgc tgacaatctc accctgagtg aattgttcta acagtcttgc
     1021 ttgtgcgcgc caacccttga gccagatctg gccagtgtca tcttcgataa atgtctctga
     1081 caaggaaatt gattctccgc tcttggtttg tacttcgcgc ttttctggaa gtttgagaat
     1141 tattgcctca atgcaatatg tatcattatt tggtttgata tcttttatcc tcgttctaat
     1201 ttgtgaaagt gtaggaatct tgtcatccac aatttttcta acaaaagaat ttccttctaa
     1261 tgttacagaa ctgccatata tttttgatgg catacactcg attacctctc ctgattttag
     1321 gtcacctgta attgaggaag catctacaat atttactact ttcttgtctt gcattacacc
     1381 taggagcagc gtacttccag aatcgctttt tgtaacagac aagatcctta ccattatggg
     1441 gttgatctct cttgtcccct ctatctcaat catagttccc tcatcaccat gtagctccag
     1501 tccctgctgt cctgattttg tcttgacacc aatcagtctt gtctttgcat caggtgagat
     1561 catctttggc atggcactct catctgtatt ccacaaaaca gtgcgaatag gtttaccatc
     1621 ttttcctttc aatctgaatt ggagggactt accttgttca cctctgaaat ttgtaaactc
     1681 tgtagtacga atgttgccat ccaagattcc tgaaacaacc aagttttgct gattgtcctt
     1741 gacatcactt acatcttctg ttatggcatc aagatcaggg atcttgcttt gggtgttgtt
     1801 tggttctatt gtggaaccag aaccgacatt gattattgga tttcccttca tatcagattt
     1861 cacataagct ttaattatct tgatcaggtc tcctggcttt agattatcaa taccgggaag
     1921 gtttgccttt tcgtcccaga gctttacctt tgccctagag tctccatcat acacggtcat
     1981 gttgcgcaag aggaattgag agccgtcctt acgagaaaat tgtctt
//
LOCUS       DASPUS010000244         2629 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_804986, whole genome shotgun sequence.
ACCESSION   DASPUS010000244 DASPUS010000000
VERSION     DASPUS010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2629)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2629
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_804986"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..771
                     /gene="dph5"
                     /locus_tag="VEJ68_05840"
     CDS             <1..771
                     /gene="dph5"
                     /locus_tag="VEJ68_05840"
                     /EC_number="2.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004164 - diphthine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0017183 - protein histidyl modification to
                     diphthamide [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diphthine synthase"
                     /protein_id="HXX06321.1"
                     /translation="THIELRTRAESEKIKTKSIHAASAITSLIGECGLHYYKIGRPVT
                     IMKELPSLTTVYYTIYENLIRGTHCILILEYNSDANFFLEPKEALSNLLLPEKEQKRN
                     VIDESTFAIVASRIGSKNQKIIAGKISSLINKDFGKPPHTIILPGRMHFTEYDALKVF
                     AECIDDPVDNSSKIQKISDQMLAKYIPKARKALDEVSKQFKNDKNLEPVIENAQLYID
                     DAEKFQKEGKEELAVLSIGYAEGLIDALRLSKGIDPWT"
     gene            811..1428
                     /locus_tag="VEJ68_05845"
     CDS             811..1428
                     /locus_tag="VEJ68_05845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyltransferase/cytidyltransferase family
                     protein"
                     /protein_id="HXX06322.1"
                     /translation="MDVLDKEIISSFYVSSISGKNPVDIIREKLSIGTDYISSRVEAL
                     VSHGFIETDKKTLTDLGRGSIRVVLAGGVFDIIHPGHIHTLRGAKALGNVLVVVVATD
                     TTAQKMKKRIPLHNMELRRELVSALSMVDHAIVGHEGDIFKTVQFVKPDIIALGYDQI
                     HQEKFIIDGCKKIGVEVSIARLQSPIPDIKSSKIESDYGKSIYGL"
     gene            complement(1444..2136)
                     /locus_tag="VEJ68_05850"
     CDS             complement(1444..2136)
                     /locus_tag="VEJ68_05850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF120 domain-containing protein"
                     /protein_id="HXX06323.1"
                     /translation="MPELKLQHILTLAELFAKGARYNFIPVTTSSLGKSINKSQQAAS
                     KHLLELENDGYIERLRSGPKVSVRITTKGHAEMSKIFSILQSSLDTSPSYIEFKGTII
                     SGMGEGAYYMSMKGYAKQFKSKLGYIPFPGTLNVKLKDKEFIEAKRSLDAHPAIMVNG
                     FSDGKRTYGWVKCYPARINNTVNAAVILLERTHHDDSIIELISRENIKKSIKLSTGSN
                     ITIRVGIDLKSH"
     gene            complement(2142..>2629)
                     /locus_tag="VEJ68_05855"
     CDS             complement(2142..>2629)
                     /locus_tag="VEJ68_05855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HXX06324.1"
                     /translation="GDRAGGFILKELKSLVNVDVVHRAPEGVEVEELTPIQIAEILKD
                     TAEDMKKETVKPKLQDPKDEPIASVAKKVFTDLNESLEAVALDEGANPVFKVPVSEVV
                     GKLSPGSGIKYLVLDGIITQRLIDSAKQAGIEYVIGHRMANLKSNDGLTLKTFTELGI
                     A"
BASE COUNT          826 a          481 c          491 g          831 t
ORIGIN      
        1 actcacattg aattgcgaac cagggcagaa tcagaaaaaa ttaagacaaa atctatccat
       61 gctgcatctg caataacatc ccttattggc gaatgtggat tacactacta caagatagga
      121 cgtccagtaa ccattatgaa agagctgccg tcactgacta cagtctatta taccatttat
      181 gagaatttga ttagaggaac tcattgtatt cttatactag aatacaacag cgatgcaaat
      241 ttcttcctag aaccaaaaga agcattatca aatctcctcc tacctgagaa ggaacaaaag
      301 agaaatgtga tagatgagtc tacatttgcc atcgttgcat caaggattgg ttcaaaaaat
      361 caaaaaatta tagcaggaaa gatatcatca ctaattaaca aagattttgg aaagccaccg
      421 catacgatta ttcttccagg aagaatgcat tttacagaat atgatgcgct aaaggtcttt
      481 gcagaatgta tcgatgatcc tgttgacaac tcttctaaaa ttcaaaagat ctctgatcaa
      541 atgcttgcaa aatacattcc aaaagcaaga aaagcattgg atgaagtttc aaagcaattc
      601 aagaatgata aaaatttgga acctgtcata gaaaatgctc agttatatat cgatgatgct
      661 gagaaattcc aaaaagaggg caaagaagag ctagcagttc ttagcattgg atatgcagag
      721 ggattgatag atgctctacg actctcaaaa ggaattgatc cgtggacata gattaatcaa
      781 gtggttaatc tttctgattt attgatacaa ttggatgtct tagataaaga aattatctct
      841 agcttttatg tctcctcaat atctggaaaa aatcctgttg acataatcag agaaaagctg
      901 tctattggta ctgattacat atcaagcaga gtagaagctc tggtatctca tggttttatt
      961 gaaacagaca agaaaaccct tactgattta ggaaggggat caattagagt agtacttgca
     1021 ggcggagtct ttgatataat tcatccaggc cacatacaca ccttaagggg tgcaaaagcc
     1081 cttggcaatg tgcttgttgt ggtggtagca actgatacta ctgcacagaa aatgaagaaa
     1141 cgcatcccac ttcataacat ggaattgcga agagagcttg tatctgcact ttcaatggta
     1201 gatcatgcca ttgtaggtca tgaaggcgac atattcaaga cagtccagtt tgtaaagcct
     1261 gacattattg ccctaggata tgaccaaatc catcaggaga aattcatcat agacggctgc
     1321 aagaagattg gtgtagaagt atccattgca agactccagt caccaattcc agacatcaag
     1381 agctcaaaga tagagagtga ttatggaaaa tccatttacg gtctataact ggcttttcta
     1441 aaactagtga gattttagat ctattcctac tcgaattgtt atattggaac ctgtagaaag
     1501 tttgattgat tttttaatat tttctctaga gataagttca atgatggaat catcatggtg
     1561 agtcctttct agcaagatca ctgcagcgtt aacagtattg ttgattctag caggatagca
     1621 tttcacccaa ccataggtac gttttccatc tgaaaatcca tttaccatta ttgccggatg
     1681 agcatcaagt gaacgtttgg cttcaatgaa ttctttgtct tttagtttaa cattaagcgt
     1741 tccaggaaaa ggaatgtaac ccaattttga tttgaattgt tttgcgtaac ctttcattga
     1801 catgtaatat gcgccttcac ccattccaga gattattgtt cctttgaatt caatgtatga
     1861 tggtgatgta tcaagacttg attgtagaat tgaaaatatc tttgacatct ctgcatgtcc
     1921 ttttgttgtt atacgtaccg aaacttttgg accacttcga agtcgttcaa tgtatccatc
     1981 attttctaat tctaagagat gttttgatgc agcctgttga gacttgttaa tactctttcc
     2041 aagagaagaa gtcgttacag gaatgaaatt ataccgcgca cctttggcaa aaagttcagc
     2101 aagagttaag atgtgttgta acttgagttc aggcattaat tttatgcaat accaagctct
     2161 gtaaatgttt tgagtgtgag gccgtcattt gacttgagat ttgccattct gtggccaatt
     2221 acatactcta ttcctgcttg ttttgccgaa tctattaatc gttgagtgat aattccatca
     2281 agaactagat attttattcc agaacctgga gaaagttttc caactacttc gcttactggc
     2341 actttgaata ctggatttgc tccttcatct agtgctacag cttcaagtga ttcattaaga
     2401 tcagtaaata ctttttttgc aacacttgct attggttcat cttttggatc ttggagtttt
     2461 ggttttacag tttctttctt catatcctct gcagtatctt ttaggatctc agctatctgt
     2521 attggtgtaa gctcttcaac ttctacaccc tctggtgctc ggtgaacaac atcaacatta
     2581 accaatgact ttagttcttt tagaatgaat cctcctgccc tgtcaccat
//
LOCUS       DASPUS010000245         5199 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1351360, whole genome shotgun sequence.
ACCESSION   DASPUS010000245 DASPUS010000000
VERSION     DASPUS010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5199)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5199)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5199
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1351360"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="VEJ68_05860"
     CDS             complement(<1..192)
                     /locus_tag="VEJ68_05860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06325.1"
                     /translation="MRQVWSILGGILVVALFASLFDYSTIVYADNQTSTNSTSSTPDV
                     TSTSITASPTTVNAGGSVTL"
     gene            complement(293..934)
                     /locus_tag="VEJ68_05865"
     CDS             complement(293..934)
                     /locus_tag="VEJ68_05865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06326.1"
                     /translation="MSSTRAPIDKKLELVTALVLAVAVVGIAWCAYQSHVWHTVETFK
                     IRDMNYDIVNYAMKNLQQGQTIVYDTVRFTAYSDALVLKEQNLSNFYYERFRPEMKTA
                     VDAWLKMDPFNNKTAPPTPFYLAEYNKTFALEAQQFASDSESKLEEAHDAAKHSEEYL
                     MLTVVYSSALFIGAILDKLFHRQARLVLFILATSITSIATILLAFMPVGANSF"
     gene            complement(1198..1590)
                     /locus_tag="VEJ68_05870"
     CDS             complement(1198..1590)
                     /locus_tag="VEJ68_05870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06327.1"
                     /translation="MSQDLIAKNDFLEGKLFLEDAEFVCVINKQGRIERSTYKNDIAI
                     SKDKKEMFTMGLQLQNSMQSDFDDEFGPVNYTITERENSRFISIPTSVGILLVQLSKT
                     IDPFAFVNKMSGLLNRANDRPQSKVGVC"
     gene            complement(1593..1997)
                     /locus_tag="VEJ68_05875"
     CDS             complement(1593..1997)
                     /locus_tag="VEJ68_05875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06328.1"
                     /translation="MQIVSNQLTANKLQEKIPKVEEILERLRQRDLQLFKRIVDAVLY
                     NDENTSIALATEVVEIRKAMMVIECAGTAVNAYGQRYPDLILCPSCCSPEISISQSNT
                     LSKCHCLECGKKWTSGLKNHSRIENNQFWSVA"
     gene            2153..2926
                     /locus_tag="VEJ68_05880"
     CDS             2153..2926
                     /locus_tag="VEJ68_05880"
                     /inference="COORDINATES: protein motif:HMM:NF024804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HXX06329.1"
                     /translation="MTGVRYQMIENVVISMKCPIFYLQIRQNSKTFVLVCPLVQSIST
                     MQETIKNYIDYHEPCSLTTFENVYTSFSEDFTRMVGEEPNENTEKVLRHIQANPGSHL
                     RMIQKELNMSMGTTQYHLELLEKMGKITSEKDSFQRFYFPVGSFGNVERNILKILNQE
                     NARDILLLIIEKKNPTQTDIVNGIKISAGTANWHISKLLELNIIREEREGKFKRYSFN
                     GNPGILVNMMKNYHTSIWNTWSARMAELFISASFTEGKK"
     gene            2926..3222
                     /locus_tag="VEJ68_05885"
     CDS             2926..3222
                     /locus_tag="VEJ68_05885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06330.1"
                     /translation="MTEFVFSPVTSIVFLVSQIAIVIVAVFLSAIAIRAYKITRLKNM
                     IFVIIAFALFAVSHTISYLDQAVVDIMPDDARYAMFGVVEIGIMMMFVLAILKK"
     gene            3924..4148
                     /locus_tag="VEJ68_05890"
     CDS             3924..4148
                     /locus_tag="VEJ68_05890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06331.1"
                     /translation="MNFKTLLPMTLFATVLGSTFAGAAFADNQDVAIAYSNFASTYVQ
                     GIQISICGSHQCSPGEIPHDPLPVEPVGGH"
     gene            4203..4829
                     /locus_tag="VEJ68_05895"
     CDS             4203..4829
                     /locus_tag="VEJ68_05895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HXX06332.1"
                     /translation="MSKDNDPPIRTDGLTRRDFLKLFAAGSLTLTFVPFVNWGQFLPD
                     PDNTALAKAQAVLSDGTFPNVNTFPVNSSQIITYPSTGDTTLDSEPFRKWQLIRLPAD
                     LGGDVNDVSAFRAYSMVCLHLWCLWQYKPAGQIGGNNLGQCPCHGSMYDPLTGKAVAG
                     PASLQSPPSNVLATLNLEADYNGNLWILPAAWDVNKNGIIGYGRYLSS"
     gene            complement(4935..>5199)
                     /locus_tag="VEJ68_05900"
     CDS             complement(4935..>5199)
                     /locus_tag="VEJ68_05900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06333.1"
                     /translation="EEADTKNIHLKSGLLTQQRFTCANHNDEEVILEPVGWQGFSCPK
                     CHSDYSIGRKIAVFHADLCEDLQKHMGDSTHKTSSGKSTLTVT"
BASE COUNT         1576 a         1009 c          966 g         1648 t
ORIGIN      
        1 aagtgtaaca gatccgcctg catttactgt agtggggctt gctgtgatcg atgtgcttgt
       61 aacatctggt gtgcttgaag ttgaattggt gctagtttgg ttatctgcat aaacgattgt
      121 actataatca aataaactgg caaatagggc aacaactagt ataccaccta agattgacca
      181 cacctgtctc attctccctc aactccactt ttgtaaatat aaaaaattgc ggcaccttgt
      241 tcgttaacat tgttcttggt tatagttacg gttttttgaa gaacctttgc gatcagaaac
      301 tgtttgctcc aaccggcata aaagccagca atattgtagc gatactagtt atgctagttg
      361 ccaagataaa cagtacaaga cgcgcttgcc tatgaaacaa cttgtccagt attgctccaa
      421 taaataatgc gctagaatat actaccgtca acattagata ctcctctgag tgttttgctg
      481 catcatgagc ttcttctagc tttgactctg aatcactagc aaactgctgg gcctctaatg
      541 caaatgtctt gttgtactct gcgagataaa atggggttgg cggtgcggtc ttgttgttga
      601 aaggatccat cttgagccat gcatcaactg cggtcttcat ctctggacga aatctctcat
      661 agtaaaaatt gctaaggttc tgttccttga gaacaagagc atcagaatat gccgtaaatc
      721 tcacagtatc atatacaata gtctgtccct gttgtagatt tttcatggca tagtttacaa
      781 tatcatagtt catgtcgcgg atcttgaaag tctcaacggt atgccagaca tgtgattgat
      841 atgcacacca tgctataccc actacagcta ctgctagtac cagtgcagtt actagctcga
      901 gctttttgtc aatgggagcc ctggtgctgc tcaaagctta gtttacccca tccagtctct
      961 tgcatcttca gaatttgcag tacagttcta aactaataaa ctgggtatgt tttgttatga
     1021 tacatagcta tcaagaatct tgagtctttt tcgagatggg agatacaatc tcttttggca
     1081 acggacttac acatgttccg cattttggca gtgtaacaac tgcatcgtga tcaatttcac
     1141 ccatgaattt tccacactca gagcagtaaa ttgacctggt atcataaata ttcattatta
     1201 gcaaactcca acttttgatt gtggcctatc attggctcta tttaacaatc cactcatctt
     1261 gtttacaaag gcaaacgggt ctattgtctt gcttaattgt accagtaaaa ttcctacaga
     1321 agtaggaatt gaaatgaatc tagagttttc tcgttccgtt attgtataat ttacgggtcc
     1381 aaattcgtcg tcaaaatcac tttgcatgga attttgcagt tgaaggccca ttgtgaacat
     1441 ctctttttta tctttagata ttgcaatatc atttttgtat gttgaacgtt ctatccttcc
     1501 ttgcttgttt ataacacaaa caaattctgc gtcttcaaga aataatttgc cctccaggaa
     1561 atcatttttg gctataagat cttgcgacat ttctatgcca cactccagaa ttgattgttt
     1621 tctattcttg aatgattttt taatccacta gtccattttt taccgcactc taggcagtga
     1681 cattttgaca aggtattgct ttgtgagatg gagatttcag gtgaacagca actaggacaa
     1741 agtatcaagt caggatatct ctgaccatag gcattcacag cagtacctgc acattctatt
     1801 accatcatcg cctttcttat ttcaactact tcggtagcaa gggctatgct tgtattttca
     1861 tcattatata ggactgcatc gacgattcgt ttgaaaagtt gtaaatctct ttgtctcagc
     1921 ctttctagga tctcttctac ttttggtatt ttctcctgca gtttgtttgc agttaattgg
     1981 tttgatacga tttgcatagt ttgcatatcc ataattaatt aataacatct gtgatacgag
     2041 cttgaaaaac aaccatcaaa aaattatcct ctcattagta tgtcagaatt agaacgtttt
     2101 gagatttgca ctacaagtat tatatcataa cgcaaaacat ttccacatac agatgactgg
     2161 ggtaagatat caaatgatag aaaatgtggt aatatctatg aaatgcccaa tcttctatct
     2221 acagatccgc caaaattcaa aaacatttgt tttggtatgt cctttggtac aatccattag
     2281 taccatgcag gaaaccataa aaaattacat tgactatcat gaaccttgtt cattaacaac
     2341 gttcgagaat gtttatactt cattttctga agattttact cgtatggttg gtgaggaacc
     2401 aaacgagaac accgaaaagg tattgcggca catacaggca aaccctggca gtcatctaag
     2461 gatgattcaa aaggaattga acatgtcaat gggaacaact cagtatcatc ttgaattact
     2521 ggaaaaaatg ggaaaaataa cttctgagaa ggatagtttt cagagattct atttccctgt
     2581 tggatctttt ggaaatgtag aaagaaacat acttaaaatt cttaaccaag aaaatgcaag
     2641 agatatcctg ctattaatta ttgaaaaaaa gaatcctact caaacggata ttgtaaatgg
     2701 cattaaaatc tccgctggta ctgccaactg gcacatttcc aagctattgg aattaaatat
     2761 aatacgtgaa gaaagggaag gaaaattcaa gagatattct ttcaatggca atccaggcat
     2821 tcttgtaaac atgatgaaaa actaccatac ctcaatctgg aacacgtgga gtgccagaat
     2881 ggctgaattg ttcatatccg cctcatttac ggagggcaag aaataatgac agagtttgta
     2941 ttcagtcctg ttacaagtat agtatttctt gtttcacaga tagccattgt aatagttgcg
     3001 gtatttttat ctgccatagc aataagagcc tataaaatta cccgtctcaa aaatatgatt
     3061 tttgtgatta ttgcatttgc cttgtttgcc gtctcacata cgatcagtta tctggatcag
     3121 gctgtagttg atatcatgcc tgatgatgca agatatgcca tgttcggggt tgtggaaatt
     3181 ggcatcatga tgatgttcgt tttagcaatt cttaagaaat aatatattat ctttttttaa
     3241 aattttcatt ttgagaaatg tccctcaaat ataatatatc attattgata tcgtgtagaa
     3301 atgaatatgc cagatgaatc ttgccgaaga tgtggtggaa cattgaaaaa atgttctcta
     3361 tgtgctgaat gtaaaaaagt gacacagcaa atttgtacaa tttgtggatt gaaaacattt
     3421 gagcgatatc atcaggattg tttctatatg atagaatcaa tacaggaaaa tcatcactct
     3481 cttatttcca tgatgcaatg ggaatagaat tattgttgta ttaccataga agagaaatct
     3541 agaaattaac tagcaacata ataaaaaata aattacaaat ataacatcat aatgtgttct
     3601 taaattgtag tacatttctt gaactgagtt atttgctata cgaagatatt ccattttttc
     3661 attttgaaaa atgtccctca aatataatat actaaaattg ctatacaata cttcatgtgg
     3721 tggcagaatg aaaaaacaca atttcgcggt tctcatgaaa gagaaaacgc cagcctcccc
     3781 caatcctctg ccatccacat ccccaaaaaa acgcgatacg acgttcttga aaaccaaaca
     3841 gaatcaacaa cacaacatga gcacagatgg gttgtttctt cccatcaatg gaggtgcgat
     3901 atctgtggga ggacgtacgg ctaatgaatt tcaagacact acttccaatg acattatttg
     3961 caacggtgtt aggttcgacc tttgcaggtg ctgcatttgc tgacaaccaa gacgtggcta
     4021 ttgcatattc taactttgca tcgacctatg ttcaaggaat tcagataagc atatgtggta
     4081 gccatcaatg cagcccaggt gagatacctc acgatccgct tccagtagaa cctgttggag
     4141 gtcattagga gtcaaaaagc atgagtcatc attatagttt aattcctgca gactgagaaa
     4201 ccatgtcaaa agacaacgac cctccaattc gtacagacgg cctaacaagg cgagacttct
     4261 taaagctatt tgcagcagga agcttgactc ttacttttgt tccctttgta aactggggac
     4321 aatttttgcc agatccggac aatactgccc ttgccaaagc ccaagctgtt ctatcggatg
     4381 gaacttttcc aaacgtcaat acatttccag taaattcttc tcaaataatc acatacccat
     4441 caacaggaga tacaaccctg gattcagaac ctttcagaaa atggcaatta atacgacttc
     4501 cagcagatct tggcggagat gttaatgacg tttcagcttt tcgtgcatat agcatggtat
     4561 gtttacatct ctggtgtttg tggcaataca agcctgcagg ccaaattgga ggcaataacc
     4621 ttgggcaatg cccttgtcat ggaagtatgt atgacccact tactggaaag gcggttgcag
     4681 ggcctgcatc gcttcaatct cctccctcaa atgtacttgc aacactgaat cttgaagctg
     4741 attacaatgg aaacctgtgg atactacctg cagcatggga tgtaaacaaa aatggcataa
     4801 tcggttatgg tcgttatctt agttcttaga atcgacatca tatgaaatca taaaaattaa
     4861 aatttagact ttagatttga accctcacag gtctgagccc aaagttatga tttgtagtct
     4921 gattccctcc tgtgttatgt tactgtcagt gttgatttac cagagctagt tttatgggta
     4981 gagtcaccca tgtgtttttg taggtcctca caaagatctg catgaaaaac tgctatcttt
     5041 cttccaatgg aataatcaga gtgacatttg ggacaggaaa aaccctgcca gcctactggt
     5101 tccagtatta cttcctcgtc attgtggttt gcgcacgtga atctttgttg tgtcaagaga
     5161 ccgcttttga ggtgtatgtt tttggtatcg gcctcttca
//
LOCUS       DASPUS010000246         2266 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1495100, whole genome shotgun sequence.
ACCESSION   DASPUS010000246 DASPUS010000000
VERSION     DASPUS010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2266)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2266)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2266
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1495100"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..955
                     /locus_tag="VEJ68_05905"
     CDS             2..955
                     /locus_tag="VEJ68_05905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HXX06334.1"
                     /translation="MLCIQANSLSRTYGSFLAVDGIDLSVHSGKIFGFLGPNGAGKTT
                     TIKLLTTLIPPTSGSINILGIDAIKHPLEVRKKIGVVLQQPSYEPTLSVERAIEKYAM
                     MWNVDNKNRKDRVEELLSAFDLEEIRKKKNDDLSIGQRRRVQVAREFVHEMDLLFLDE
                     PTVGLDPSARRGLLDYIKKKVRDGLTIFFTTHVLEEAEYLCDEIAIINKGKIIAVDTP
                     DDLKNKFGREKTIKIHVQESGKNISNILQDIQDYKLDRNAGTIITINSNDSEQVLQKI
                     LQVLNENKITIEDLSVVPTTLEEIFLSVVKNSNESNIPSSK"
     gene            927..1688
                     /locus_tag="VEJ68_05910"
     CDS             927..1688
                     /locus_tag="VEJ68_05910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HXX06335.1"
                     /translation="MNPIFRLVNRNLTISLNMGFLIWQVIFPVIYIFVAGFAYTALIH
                     QVAFANKTLDYPAFIASGMIGFNIMNSTLISGIIIWNDRRHGMFEQILVGPFTRAQYI
                     LSNVYTIGIIGLVSAGLITAIGYPLFFKSVEFNVLTIPLVIFASITGAVLFGSIASII
                     STRLKSSEGFNVIINTVFLFFAFVSTAFYPAQGAPPILATAFYLNPLTYLVDVVRAGI
                     FGNFDFTVGIEMLILLAGALFLFTIATKLLSKLEI"
     gene            complement(1716..>2266)
                     /locus_tag="VEJ68_05915"
     CDS             complement(1716..>2266)
                     /locus_tag="VEJ68_05915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012617116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HXX06336.1"
                     /translation="LNTWGTYGTDDGKFDTPSGIAIDKNGYIYVVDTNNQRIEKFTSD
                     GQFLTKWGTLGADDGQFFRPIGIAIDSSGNVYVTDSGNSRVQKFTSNGQFLTKWGSNG
                     TDDGQFLSPAGIAVDPAGNVYVSDSNPYNPSIQKFSIQSQTGSLTGQQNAVPEFGTTA
                     IVALTVAIVSSLIFRFKFRIFH"
BASE COUNT          730 a          413 c          431 g          692 t
ORIGIN      
        1 aatgctctgc attcaggcaa actctctttc cagaacttat ggaagtttct tagcagtaga
       61 tggtatagat ctctcagtgc attcaggcaa aatatttgga tttttaggtc ccaatggagc
      121 agggaagaca acaacgatta aactcttgac taccttgatt ccgccaacaa gtggaagtat
      181 aaacattctt ggtattgatg ccattaaaca tccactcgaa gtacgtaaga agattggggt
      241 agtgttgcag caacctagct atgagcctac tttgagtgtt gagcgtgcta tagaaaaata
      301 tgcaatgatg tggaatgtag acaacaagaa tcgcaaagat agggtagaag aattactatc
      361 tgcctttgat ttggaggaga tacgaaaaaa gaagaatgat gatctctcta tcggacaaag
      421 aagaagagta caggtagcac gcgaatttgt tcatgagatg gatcttttat ttttagatga
      481 accaacggtt ggtctagatc catcagcaag aagaggttta cttgattata tcaaaaagaa
      541 ggttagggac ggactgacta tattttttac aacacacgta ctagaagaag cagagtacct
      601 ctgtgatgaa attgctatta taaacaaagg aaagataatt gctgttgata ctccagacga
      661 tctaaagaac aaatttggaa gagaaaagac aataaaaatt catgtgcaag aaagtggaaa
      721 aaatatctca aacattttgc aagacattca agactataaa ctagatcgta acgctggtac
      781 aataatcact atcaattcaa atgactctga acaagtcctt caaaaaatac ttcaggtatt
      841 aaacgaaaac aagataacaa tcgaagatct aagtgtagtt ccaacaaccc ttgaagagat
      901 atttctgtca gtggtgaaaa attctaatga atccaatatt ccgtctagta aatagaaatc
      961 ttaccatatc actcaacatg ggatttttga tatggcaagt aatattccca gtaatctata
     1021 tctttgtagc aggctttgct tataccgcgc taattcacca agttgctttt gcaaacaaga
     1081 cactagacta tccagcattt attgcgtcag ggatgattgg attcaatatc atgaacagta
     1141 ctctaatctc cggaattata atttggaacg acagaaggca tggaatgttt gaacaaattt
     1201 tggtcggtcc atttacaaga gctcaataca tactaagtaa tgtttacaca attggaataa
     1261 ttggattggt aagtgctgga ttaattaccg caattggata tccactcttc ttcaagtctg
     1321 ttgagtttaa tgtacttact attccacttg ttatctttgc atctattaca ggagcagttc
     1381 tttttggttc tattgcctct ataatatcaa cgagattaaa gtcaagcgag ggatttaatg
     1441 tgataataaa tacagtgttt ctcttctttg cttttgtaag taccgcgttt tatccagcac
     1501 agggagctcc accaatactt gctactgcct tttacttgaa cccgctaaca tatcttgtcg
     1561 atgtagtcag ggctggaatc tttggaaact ttgattttac agttggaata gagatgctta
     1621 tccttctagc gggagcattg ttcctcttta caattgcaac aaaacttttg tcaaagttgg
     1681 agatttgatt aatacaactc gctacagatt atgatttaat ggaaaattct gaacttgaat
     1741 ctaaaaatca atgaagaaac aattgcaacc gttagagcaa caatagctgt agtaccaaac
     1801 tcaggaacag cattttgctg accagtcaaa ctcccagttt gactttgtat tgaaaatttt
     1861 tgtatactgg gattgtatgg gttactgtca gacacgtaga cattgccagc aggatcaact
     1921 gcaatgcctg ctggtgataa gaactggcca tcatctgttc cattagagcc ccactttgtt
     1981 agaaactgtc cgttacttgt aaacttctgt acacggctat tgccagaatc tgtcacgtat
     2041 acattaccac ttgaatcaat tgcaattcct atcggtcgaa agaattgacc atcgtctgca
     2101 cctagagtac cccactttgt tagaaactgt ccatcacttg taaatttctc tatgcgttgg
     2161 ttatttgtat ctacaacata gatgtaacca tttttgtcta ttgcaattcc gctgggggtg
     2221 tcgaattttc catcatctgt accatatgtt ccccaagtgt tcagag
//
LOCUS       DASPUS010000247         5627 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_677678, whole genome shotgun sequence.
ACCESSION   DASPUS010000247 DASPUS010000000
VERSION     DASPUS010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5627)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5627
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_677678"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..797)
                     /locus_tag="VEJ68_05920"
     CDS             complement(<1..797)
                     /locus_tag="VEJ68_05920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013481695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HXX06337.1"
                     /translation="MGDLRKDYVIDRFVIVSQDNHNAVDSKKCPYCPGNESMTNPSSL
                     SLVAKDGMLQRLQDTEDYYVEDWSVRVFESKNPVVATTSENSYSDRPLYSEPAYGYHY
                     IVVASEKHKESLASISIEQWSNVLVVIQDRLRWLYTQRGVTYVSIYVNHGKEAGGYTT
                     HPHLNVVTFSTIPPVIEQEAEAAHKILNEKGICPMCQTVSTETGGPRQILQTEGFLAF
                     SPWAPSHPYEFWIYPKKHTTSFSKITQKEINDLSLILRATLGGLAST"
     gene            1002..1565
                     /locus_tag="VEJ68_05925"
     CDS             1002..1565
                     /locus_tag="VEJ68_05925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HXX06338.1"
                     /translation="MSTTSLRRDHDLIEKVLRAMWATVPLLKSGKKIPEPIISQVIDF
                     TKNFTDVCHHGKEENALFPELEKKGMPKESGPIAVMLMEHQVTRKLAARMDESSKTYI
                     KTGESTQLIADMQEYINHVVQHIWKENNRLFEMAEMALRNDVERINQELANVEEQKLK
                     EIRKTRESYEQLANELEKQYPLQDDKL"
     gene            1684..2118
                     /locus_tag="VEJ68_05930"
     CDS             1684..2118
                     /locus_tag="VEJ68_05930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013193509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HXX06339.1"
                     /translation="MNLVAKAGDKIKVEYVGKLDNGSIFDSSEVHGKPLEFEIGKGHV
                     IKGFDDAVVGMNEGEEKEFSISPSDAYGEHDSTLIQKISRDVFPQDVELAPGLLFEAG
                     LPTGEKIPAMITAVDGNTVSVDLNHPLAGKTLNFKIKIKEIM"
     gene            2256..3512
                     /locus_tag="VEJ68_05935"
     CDS             2256..3512
                     /locus_tag="VEJ68_05935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HXX06340.1"
                     /translation="MIYVLLDGIGDLPHPDLKGMTPLKYAKTPNLDKIARNGAIGEVI
                     SVGKGIAPQSDIAVFNMLGYKFENSTYVGRGVIESIGVGIDFKNGDIALRGNFSTVND
                     ERIIVDRRAGRKIEREDAIAISKELEQKIKFSNPKATVVVAPTIGHRVIVRIRCDGQF
                     LSPDISNTDPAYARIDGMGVAKAVGDYLKIEKSFPLNESDSAKLSASLVNEFTDQSLQ
                     IMKNSEVNKKRKDLGKKLLNSILLRDAGNKLPDVIPINQLHDMKFSCIVDMPVEIGIA
                     KVLQMKTFNAGDLTDYEEKARVAAKAMETQNAIYVHIKGPDEFGHDGDAIGKMKNIEE
                     IDTRFFGTLLDNIDTSKVSIVISGDHSTPCINKGHSDDPVPVLVSGDSVKKDGTSRFT
                     EEDAKKGKIGLLAGADVIKTVISLLR"
     gene            complement(3505..4026)
                     /locus_tag="VEJ68_05940"
     CDS             complement(3505..4026)
                     /locus_tag="VEJ68_05940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF309 domain-containing protein"
                     /protein_id="HXX06341.1"
                     /translation="MPQDAPKLLEKADQLTHGLGATIRDSRVSKKYLEFDVSVPKEQL
                     ELLVDKLAPIGHLDDARHLVEEKIEKEEALKNAKFYFNNERFWECHEVLEGVWKKTFE
                     GEKDLVQGLILVAAAFVHYQKNENDICLSIMHRAMEKLKSATGIYHAIEIDDFKRKTS
                     EIIKTEKISTFTI"
     gene            4149..4511
                     /locus_tag="VEJ68_05945"
     CDS             4149..4511
                     /locus_tag="VEJ68_05945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06342.1"
                     /translation="MSMIEVTRDVKNSLLSRREITCTFKGLSGRLKKIEAIDMISKQF
                     SLEGKVIVPVLLKNATGKPLVSGTFYVYEDENLAKQHLKAAVFKRLEKAKGAGTKPED
                     TAQTEAKPAEEKPKEENK"
     gene            4511..4684
                     /locus_tag="VEJ68_05950"
     CDS             4511..4684
                     /locus_tag="VEJ68_05950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S27ae"
                     /protein_id="HXX06343.1"
                     /translation="MASKKGSSPSVYKYYKVKGEKAEKAKKECSRCGKGVFMSEHKDR
                     RTCGKCGLTEFTK"
     gene            complement(4685..5392)
                     /locus_tag="VEJ68_05955"
     CDS             complement(4685..5392)
                     /locus_tag="VEJ68_05955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007401267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06344.1"
                     /translation="MDPLLRVNEAHKNGIIPDKVHSLILERFDIAVEGIDRIEKASGI
                     NFPLAYVEPSIIISRPHVESFDYGILFARTIPIVTNEKLEIIIQITAPLVAYGLKGTI
                     HAILAHEFLHYLELIKRISKMEILSDEISGNLFESVYADTTRLFEPRAVFDDKTLLSH
                     ITKKFPEGFRDYKLEDKVLKHWIQKKLPIINIALDANIIKIPADVLAKTKIDLTLAKK
                     LEQIEQKISKLRTKKLY"
BASE COUNT         1910 a          966 c         1062 g         1689 t
ORIGIN      
        1 attgtacttg ccaaaccacc aagagtagct ctcaatatca aggaaagatc attaatctct
       61 ttctgagtta ttttagaaaa gcttgttgta tgcttttttg gatagatcca aaattcatat
      121 ggatgagatg gtgcccaagg actaaaagca agaaatcctt cggtttgtaa tatttgtcga
      181 ggacctccag tttctgtact tactgtctga cacattggac agataccttt ttcgtttagt
      241 atcttatgtg cggcttctgc ttcttgttct ataacaggag gaattgtaga gaatgttaca
      301 acattgagat gagggtgtgt agtataacca cctgcttctt tgccatggtt tacatatatt
      361 gagacatatg taacacctcg ttgtgtgtat agccacctca gcctgtcctg aataactacc
      421 aaaacatttg accattgttc tatagaaata ctcgccaatg attccttgtg cttttcagat
      481 gcaactacga tgtagtgata cccatatgca ggttcactat aaagcggtct gtcactatag
      541 gaattttctg aagttgttgc aacaacaggg tttttacttt caaagactcg gacggaccaa
      601 tcctcaacat aataatcttc agtgtcttgt agtctttgca acattccatc ctttgcaaca
      661 agggaaagtg atgatgggtt cgtcatagac tcgtttccag gacaataagg acatttcttt
      721 gaatcaactg cgttatgatt atcttgagat actattacaa atctgtcaat gacatagtct
      781 ttgcgaagat cccccatact aatgctaaat ttccaagtta ctgatttaaa tcctttgcag
      841 tgatttacat ttcctaaatc aaccaagttg tgatttaaat catttaaaaa attgggcaaa
      901 tttagtcaaa ataattcaag tatgatccaa gagcttagaa aaataagatc gcagtctttg
      961 acagaattaa gcttaaattg gaataagaaa tggttcaagt tgtgtccact acatcattac
     1021 gaagagatca cgatcttatt gaaaaagttc taagggcaat gtgggctaca gttccacttt
     1081 taaaaagtgg aaaaaaaatt cccgagccta tcatttccca agtaatcgat tttacaaaaa
     1141 actttactga tgtttgccat catggaaaag aggagaatgc tctgtttcct gaacttgaaa
     1201 aaaaaggcat gccaaaggaa agcggaccta ttgcagttat gctaatggaa caccaggtaa
     1261 ctagaaagct tgcagcacga atggatgaat catctaagac ctacataaag acaggtgaga
     1321 gtactcagtt gatagctgac atgcaggaat atatcaatca tgtagtgcaa cacatctgga
     1381 aagaaaataa cagattgttt gagatggcag agatggcctt aagaaatgat gtagaaagaa
     1441 taaaccaaga acttgcgaat gttgaggagc aaaaactcaa agagatacga aaaacaagag
     1501 aatcatatga gcaacttgcc aatgaacttg aaaaacaata tcccctacaa gacgacaagc
     1561 tttgatataa atccggaatt ttataaaaaa caaaggattt ttgtattaaa caattcttag
     1621 ttgaaatagg aacatgcaga ttgcaaacaa taatgagatt tttctagcac acatgaggat
     1681 gacttgaact tggtagcaaa agctggagat aagataaaag tagaatatgt cggaaaactc
     1741 gataatggtt caatctttga tagttctgag gttcatggaa aaccactgga attcgagata
     1801 ggcaaaggac atgtaataaa aggatttgat gacgcagtag taggaatgaa tgaaggcgaa
     1861 gaaaaagagt tcagcatatc accttctgac gcatatggag aacatgattc tactctgata
     1921 caaaaaattt caagagatgt atttccacag gatgttgagc ttgcacctgg attattattt
     1981 gaagctggtc ttcccacagg cgaaaaaata cctgctatga taacggctgt agatggaaat
     2041 acagtatcag tagatcttaa ccatccttta gcaggaaaaa cattaaactt taaaataaaa
     2101 atcaaagaga taatgtaatt tctcgtttta acaagctttg attaattttg aaatttacaa
     2161 atcatctgat cgcattaaaa atcaaggttt atgtgtacta ggaaaaatcc gtaagattag
     2221 gctgagtaga aattacaaac aattccaata tccacattat ctatgtttta cttgatggga
     2281 taggagattt gcctcatcct gacctcaagg gaatgacacc gctaaagtat gcaaaaactc
     2341 caaacctaga caagattgca agaaatggcg ctattggtga ggtcatctcg gttgggaagg
     2401 ggattgctcc tcaatctgat attgctgtat tcaacatgct tggctacaaa tttgaaaatt
     2461 cgacctatgt tggtagagga gtgattgaat caattggtgt tggaattgat tttaaaaatg
     2521 gtgatattgc attacgagga aatttttcaa ctgtaaatga tgagagaatt atagtagata
     2581 gaagagcagg aaggaagata gaacgagaag atgctattgc tatatcgaag gaattagaac
     2641 aaaaaatcaa attctcaaac cccaaagcta ctgttgtggt tgcacctact ataggacaca
     2701 gagttattgt tagaataaga tgtgatggtc agtttctatc tcctgatata tccaatacgg
     2761 acccagcata tgcaagaatt gatggtatgg gcgtagcaaa agctgtcgga gattatctaa
     2821 agattgaaaa atcatttcct ctaaacgaat ctgattctgc aaagctttcc gcctcactag
     2881 taaatgaatt tacagaccaa tcattacaaa taatgaaaaa cagcgaggtt aacaagaaac
     2941 gtaaagattt gggaaagaag cttctaaatt caattctatt acgagatgcg ggaaacaaat
     3001 taccagatgt catcccaata aaccaattgc acgatatgaa attttcatgt atagtagaca
     3061 tgccagttga gattggcatt gcaaaagtct tgcagatgaa gacctttaat gcaggagatt
     3121 tgacagatta tgaagaaaaa gcccgagttg ctgcaaaggc aatggagact cagaatgcca
     3181 tatatgttca cattaaaggt cctgatgagt ttggacatga tggagatgcc attggaaaaa
     3241 tgaaaaatat tgaagagatt gataccaggt tctttggtac tcttttagat aacatagata
     3301 cctccaaagt ttctattgta atctcagggg atcattctac tccatgtata aacaaaggcc
     3361 atagtgatga tcctgttcct gttctagtat cgggggactc tgtcaaaaaa gatgggactt
     3421 ctaggtttac cgaagaagat gcaaagaaag gaaaaatagg acttctcgca ggtgcggatg
     3481 taatcaagac tgtaatatcg cttctcagat agtaaaggta gagatttttt ctgtcttaat
     3541 tatctcagat gtttttctct taaaatcatc tatctcgatg gcatggtaaa ttcctgtggc
     3601 acttttcagc ttctccattg ctctatgcat aatagaaaga caaatatcat tttcattttt
     3661 ttggtaatga acaaatgctg cggcaacaag aattagcccc tgcactaaat ctttttcgcc
     3721 ttcaaaagtc ttcttccaca caccttcgag aacctcatga cattcccaaa atcgctcatt
     3781 gttaaaatag aattttgcat ttttcaacgc ttcttccttt tctatctttt cttcaaccag
     3841 atgtctagca tcgtctagat gtccaatcgg tgccagcttg tcaactaaaa gttcaagttg
     3901 ctctttcgga accgatacat caaattccag atatttttta gaaactcggg aatcacgaat
     3961 agtcgcacca agtccatgag ttaactgatc tgccttttcc aacaattttg gtgcatcttg
     4021 tggcatataa ccggaatttt ttagatgaat cataaaacgg tccatgattc tatagcatga
     4081 ttatttctta aatttgttag caaaagcctg ttaagattta tatgaactat taaaaggacc
     4141 ccacatacat gtccatgatt gaagtaacac gtgatgtaaa gaattcctta ctatcaagaa
     4201 gagaaataac gtgtacattc aagggactgt ctggaagact taagaaaata gaagcaatcg
     4261 atatgatctc taaacaattt agtctagagg gaaaagtgat tgtaccagtt cttctaaaaa
     4321 atgcaactgg taaacctttg gtctctggaa cattttatgt gtacgaagat gagaacttag
     4381 caaaacaaca tctcaaggct gcagttttca aacgacttga aaaagcaaaa ggagcaggta
     4441 caaaaccaga agacactgca cagacagaag caaaacctgc tgaagagaaa ccaaaggaag
     4501 agaacaagta atggcaagta agaaaggatc tagcccttcc gtttacaagt attataaagt
     4561 aaagggggaa aaagctgaaa aagctaaaaa agaatgttcc aggtgtggca agggcgtatt
     4621 tatgtcggaa cataaagaca gacgaacctg tggcaagtgc ggactcacag agtttaccaa
     4681 ataattaata cagtttcttc gtccgtagct tagagatttt ttgttctatt tgctctaatt
     4741 ttttggcaag ggttaaatca attttggtct ttgcaagcac atctgctgga atctttataa
     4801 tgttagcatc aagtgcaata ttaattattg gtagtttttt ttggatccaa tgttttaaca
     4861 ctttatcttc aagcttataa tctcgaaatc cttctggaaa tttttttgtt atatgtgaaa
     4921 gcaatgtctt gtcgtcaaat acagctcttg gttcaaacag tcttgttgta tcagcataca
     4981 cactttcaaa gagatttcct gagatttcat cagagagtat ctccattttt gatattcttt
     5041 taatcagttc caaataatgc agaaattcat gagccagtat ggcatgtatt gtgcccttga
     5101 ggccataagc gacgaggggg gctgtaattt ggattataat ttctaatttt tcatttgtaa
     5161 ctatcggtat agttcgtgca aataatatcc catagtcaaa agattccaca tgtggccgtg
     5221 agataataat agaaggttca acatatgcca atgggaagtt aatcccagat gccttttcta
     5281 ttctgtctat accctccact gcaatatcaa atctttctag aatcagagaa tgaaccttat
     5341 ctggtattat tccattttta tgagcctcat ttactctcaa gagtggatcc aattgaatca
     5401 atttgaattg gactataata aaaccttgac ctaatgtaaa atctatcgaa tgtaatttac
     5461 acgatcagtt gatgatttag atattaaatt aaaattcatt ttgtaactgt tattttacga
     5521 aaatcaaatg ctttgcattt gcaattagtt tccaatacac tacttaaact tggttcaatc
     5581 tcatgcccgg caacaaatct tttaattgga atcccaccat ctgattc
//
LOCUS       DASPUS010000248         2099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1628088, whole genome shotgun sequence.
ACCESSION   DASPUS010000248 DASPUS010000000
VERSION     DASPUS010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1628088"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..112)
                     /locus_tag="VEJ68_05960"
     CDS             complement(<1..112)
                     /locus_tag="VEJ68_05960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010191138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HXX06345.1"
                     /translation="MEKVAIVTGSSSGIGFETALALARDGYYTYATMRDTK"
     gene            complement(185..>2099)
                     /locus_tag="VEJ68_05965"
     CDS             complement(185..>2099)
                     /locus_tag="VEJ68_05965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HXX06346.1"
                     /translation="LSRDQYPKIKEIADRLALDIAVFDGDTKEAERRTILEVPPDIII
                     TNFDVLHYHLWHRTRFAMLLHTVKFMAVDEAHVYSGIFGSNVHYIIKRMKRISPKMQF
                     IASSATLENASLFCQELFGTKMMQVSGAGKKGRIEFSILFPSLMTQRALMIDILKKLT
                     SKKHKTLVFNNSHLNSELLALQARRQKIDIKVHRAGLMANYRKSVENLFKNDKLLSVS
                     ATPTLELGIDVGNVDGVISSTIPVNRLVQRIGRAARKGQDGYAFLVLGNDPISQYYKN
                     HPSDYFEDVEQIYIDPKNPFVEEFQVLAMACDKPIAKHELPEHKDVIDRHCGAGNLIL
                     MENRYVPNFEQIKNLLEDYSIRGIGKSIDIFLNGKKVGDRVLPIALEELHPSAVYFLA
                     GTRYRVQELGYPDTMTAKLEFLPRDHPYYTKALTEEWPTIEIIFEKRQAKGIEVAFCK
                     LHIQKRVYGYVNIELGQDVTQGQKVLLERPLDYDYITKGIVFKAPRPQSEISRSENEE
                     YIEASGYHATEHVVIEGCNMITGGVSQDLGGISLGTSGLIFVYDSAIGGNGASKALYD
                     RLEKVFERSLHIVKECPCKNEAGCPRCTFSYRCGNNNEYLHKMATTEILQRIIDGEAT
                     EVSEPVEGDKPLV"
BASE COUNT          563 a          462 c          375 g          699 t
ORIGIN      
        1 tctttgtatc tcgcatggta gcatacgtgt aatatccatc ccttgcaagc gcaagagctg
       61 tctcaaaacc tatcccgctt gagctgccag ttacaattgc gactttttcc atgtgtatca
      121 ttccaggatc gtattaataa tttctatcat tttttaaaaa aatcacatag gattggtgac
      181 ttgactaaac aaggggcttg tcgccttcaa cgggctctga aacctcggtt gcttctccat
      241 cgattattct ctgaagtatc tctgtagtgg ccatcttatg cagatactca ttattattac
      301 cacatctata ggaaaaagta cagcgagggc atcctgcttc attcttgcat ggacactctt
      361 ttacgatatg caagcttcgc tcaaatacct tctcaagtct gtcgtacaag gccttgcttg
      421 ccccgtttcc acctattgca gaatcataca caaaaattaa tccagatgtg ccaagtgaga
      481 tcccacccaa gtcctgtgag actccccctg taatcatgtt acatccttca atgactacat
      541 gttcggttgc atggtaccca cttgcctcga tatattcttc attttcagat ctgcttatct
      601 cgctttgtgg tctaggagct ttgaagacaa tcccctttgt gatataatca taatctaagg
      661 gtctttcaag aagtaccttt tggccctggg ttacatcttg accaagctca atattgacat
      721 aaccgtaaac tcgtttttgt atatgtaact tacaaaatgc aacctcaatt ccctttgctt
      781 gtctcttttc aaaaattatc tcaattgtgg gccactcttc tgtgagtgcc tttgtatagt
      841 agggatgatc tcttggcaga aattctaatt ttgcagtcat ggtatcagga taaccaagct
      901 cttgtacacg atatcttgtc ccagcaagaa agtaaacagc tgatgggtga agctcctcta
      961 atgcgattgg caaaacccta tcgccaactt ttttaccatt caaaaaaata tcgattgact
     1021 tgccaattcc tcgtatgctg tagtcctcca ggagattttt gatctgttca aaatttggaa
     1081 catatctatt ttccatcaag atcaaatttc cagcaccaca atgcctatca atgacatctt
     1141 tgtgctcagg cagctcatgt ttggctatgg gcttatcgca agccattgct aaaacctgga
     1201 attcttcaac aaaaggattt ttggggtcaa tgtaaatttg ttccacgtcc tcaaaataat
     1261 cactagggtg attcttgtaa tactgtgata ttggatcgtt tccaagtacc agaaaagcat
     1321 aaccatcttg tccttttctt gcagcccttc caattctctg gacaagccga tttaccggaa
     1381 ttgttgaaga tatcactccg tctacattgc caacatcaat tccaagttct aatgtgggtg
     1441 ttgcagaaac cgagagcaat ttgtcatttt tgaataaatt ctcaactgac tttctatagt
     1501 ttgccatgag gcctgctctg tggaccttga tatcgatttt ctgtcttcta gcttgtaacg
     1561 ctaaaagttc tgagttgaga tgcgagttgt tgaatacaag agtcttgtgt ttttttgaag
     1621 tcagtttctt taaaatatca atcatcaatg ctcgctgtgt cataagtgat ggaaataaga
     1681 tagagaattc tattcttccc ttttttccag cacctgagac ttgcatcatc tttgttccaa
     1741 agagctcttg acaaaacaag gatgcatttt ctaaggttgc tgatgatgca ataaactgca
     1801 tctttggcga gattcttttc attctcttaa tgatatagtg tacattagaa ccaaaaatcc
     1861 cagaatatac atgggcttcg tcgactgcca tgaattttac tgtatgcaac aacatagcaa
     1921 acctggttct gtgccacaaa tgataatgca gaacatcaaa attcgttatg atgatatcag
     1981 gaggtacttc gaggattgtt ctcctctctg cttcttttgt gtccccatca aaaactgcaa
     2041 tgtctagtgc cagtctgtct gctatttctt ttatttttgg gtattggtcc cgtgacaga
//
LOCUS       DASPUS010000249         4003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1225456, whole genome shotgun sequence.
ACCESSION   DASPUS010000249 DASPUS010000000
VERSION     DASPUS010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4003)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4003
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1225456"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            452..751
                     /locus_tag="VEJ68_05970"
     CDS             452..751
                     /locus_tag="VEJ68_05970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HXX06347.1"
                     /translation="MPTIDQLKKPQNRLEPVEGVIDSISEPRTVNLKTGGQAQVADAI
                     LKDGTGQIKLSLWDAQIKMVKQGSKIRVENGYISTFRGENALNVGKYGKLEVLEF"
     gene            complement(748..1353)
                     /locus_tag="VEJ68_05975"
     CDS             complement(748..1353)
                     /locus_tag="VEJ68_05975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06348.1"
                     /translation="MKKRGPIVIIAGAVMIAIAMMLAYSVVHNAGPSLGGEGFFPSPE
                     SMFDEVSEKETIDPGTAYTFSHTTTSSQVPLMWGLYITDYKSNDHVLVTVSNIFGDKF
                     GSYEEGDPIFIKSFVIPKVDTYSFYVENKGSDSITVKIMYSENPEKSKALTDPNSAFY
                     KNIVPLAASGFLLMIGIAVIIAGIVLSVIDWKRGKNQSRYI"
     gene            complement(1354..2130)
                     /locus_tag="VEJ68_05980"
     CDS             complement(1354..2130)
                     /locus_tag="VEJ68_05980"
                     /inference="COORDINATES: protein motif:HMM:TIGR00162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome assembly chaperone family protein"
                     /protein_id="HXX06349.1"
                     /translation="MSLPHRITVEIIDMPKLKNPSLICGLPGSGYVGKLAVDHMVDEL
                     KGIPFANIFSSSFPPQILIQPDGTADLMKNTLYYCKTKSQDLVLLSGDAQPVTPESEY
                     EMADEITKICEKLGVKTIYTLAAYITGTFSKTPKVHGSSTSPQIIKEFSKHGIFSMTG
                     GSITGMNGLIIGVGKRRDITGICLLGETSGYVVDAKASKAVLETLGKMLDLKLDLASI
                     TKKAQDTEQLIKTIEEQMGQRQSHESLPMQQQDKKLGYIS"
     gene            complement(2176..3054)
                     /locus_tag="VEJ68_05985"
     CDS             complement(2176..3054)
                     /locus_tag="VEJ68_05985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06350.1"
                     /translation="MASLSAVAKSYRAKKEAVAKLRRQGEKKLKEVLSQKRRSHSGLV
                     SLERKKEDVVRNIDHAAQTLNQYLAQKDSIERLKIAAEERLRQEQNARDEVKQQSEYG
                     GPEEKGTAVQRLKIIEDKIAELHSEIKQREGAESRIHTLIENMQKAKTKLDKQLKNQI
                     HAKPSLLEQLKSSQKAEASLRPRVQSLVKREAQTAKVLQSAVKKLTILAIARRRSERK
                     KAARRAKLKAKLRRAKLRIRRKKTRSRTMKRLKRRVGRKIKSRVRRTRRKVVKRKIAR
                     KVAKRKIKRSSKAKRR"
     gene            3213..3524
                     /locus_tag="VEJ68_05990"
     CDS             3213..3524
                     /locus_tag="VEJ68_05990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06351.1"
                     /translation="MEFHPSKIPISKTFQAKNEHEAPDIAAEMVRLGFGIQKGAFRVI
                     MTKDKSVAKKIGFIIMNELNLGLRKTKQERDVRYWIYSYDTEHYAMVLISSKVFDALG
                     F"
     gene            complement(3513..3941)
                     /locus_tag="VEJ68_05995"
     CDS             complement(3513..3941)
                     /locus_tag="VEJ68_05995"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HXX06352.1"
                     /translation="MKKTRRLGLILLLSLLIGTMVTAYMRCYTGYEKPDLQFMGAHLP
                     FKSGADVGVPCKIDGTFPAGHTVRSTIFAFIVSYALSRRFPRGCYLLWLYPALISISR
                     LYLLQEYPTTVIGGVIFGILIADVIAKKLKIEMIFDKSKT"
BASE COUNT         1182 a          768 c          707 g         1346 t
ORIGIN      
        1 agataatagc gataataatc atgctcactg gcatatactt gataaataga aaagagagca
       61 cgaaggaaaa acccacacct tcaagttttg gtttttaatt ttgctgaaac ctatacttag
      121 ggaacatagt gcaattaaga aaaccccgcg gagaaggcag gaataaagct agatttaggt
      181 gagaacaaga ttggaaatct cattaaactc gcttctatga aaaaatcccg taccacgtaa
      241 gagaatgatt tttaattcac catgtgaatg ccagtatatg acgtaccgaa ttctgtaaca
      301 attaattttt ccgaaccaga accaaaaaag ggtacataac cttctcatcc tccgaaactt
      361 aacacgatga tttacaaata cgtaaccttc aataacttac cagaagtctt catcaaaaca
      421 cttattattt gaataagaaa aaatttgata aatgccaacc atagatcaac taaaaaaacc
      481 tcagaataga ctagaaccag tcgaaggagt catcgacagc attagcgaac caagaaccgt
      541 caacctaaag acaggcggac aggctcaagt ggcagatgca atactcaaag atggaaccgg
      601 acaaatcaag ctctccttat gggatgcaca gattaagatg gtaaaacaag gatcaaaaat
      661 tcgagtagag aacggctaca tcagtacgtt tagaggagaa aatgctctca acgtaggcaa
      721 atatggcaag ctcgaagtac tagaatttta gatataccta gactgattct tacccctttt
      781 ccaatcaatt acagaaagta ctattccagc gataataact gcaattccaa tcattaggag
      841 aaaaccagaa gctgctaacg gtacgatgtt tttgtaaaat gcggaattag gatcggttaa
      901 cgcctttgat ttttcagggt tttcagagta cattattttg actgtaatag agtcgcttcc
      961 cttgttttcc acgtaaaagc tataggtgtc tacctttggt atcacgaatg attttatgaa
     1021 gattggatcc ccttcttcat acgagccgaa cttgtcacca aatatgttgg atacggtaac
     1081 caacacatga tcatttgatt tgtaatcagt aatgtacagg ccccacatca gaggcacttg
     1141 ggaagaagtg gtagtatgag agaatgtata cgctgtacca gggtctattg tctctttttc
     1201 ggagacttca tcaaacatgc tttctggaga gggaaagaaa ccctcaccac caagacttgg
     1261 tcctgcattg tgtacaacag aatatgcaag catcattgct atagcgatca ttaccgctcc
     1321 agctataatc acaattggac ctcgtttctt catttagcta atgtatccta attttttgtc
     1381 ttgttgttgc atcggaagag attcgtgtga ttgtctttgt cccatttgtt cctcaattgt
     1441 ttttattagt tgttcagtat cctgtgcctt ttttgttatg ctagcaagat ctaatttaag
     1501 atcaagcatt ttcccaagag tttcaagtac tgctttagat gctttggcat caacaacata
     1561 tcccgaggtc tcaccaagca aacaaattcc agtgatatct cgtcgttttc caactccaat
     1621 aattaaccca ttcattccag tgatgcttcc tccagtcatt gagaaaattc catgttttga
     1681 aaattctttt ataatttgtg gcgatgtact tgagccatgc acctttggag tttttgaaaa
     1741 tgttccagta atatatgcag caagtgtata gattgttttt actccaagct tttcacaaat
     1801 ttttgttatc tcatctgcca tttcatattc actttctgga gttacaggtt gtgcatctcc
     1861 acttaaaaga accaagtctt gtgatttagt tttacaatag tatagagtgt ttttcataag
     1921 gtcggcagtc ccatctggtt gaataagaat ctgcggagga aatgatgatg aaaaaatatt
     1981 tgcaaatggg attcctttca attcatcgac catatggtca actgcaagtt ttccaacata
     2041 tccacttcct ggcagtccac aaattaatga tgggtttttc agttttggca tatcaattat
     2101 ttcaacagta attcggtgag gaagtgacat gactttggga aaaaagttat tcaatattaa
     2161 ttaagcgtag aatttctatc gtcgttttgc ttttgaagat ctttttatct ttctttttgc
     2221 aactttgcgt gctatttttc ttttgacaac ttttcttctt gttcttcgaa ctcttgattt
     2281 aatttttctg ccaactcttc tcttcaaacg tttcatcgtt cttgatctag tttttttcct
     2341 tctaattctc agttttgctc ttcttagctt tgcttttagt tttgcccgtc ttgcagcctt
     2401 tttcctttca gatcttcttc gagcaattgc aagtattgtc aatttcttta ctgcagattg
     2461 gagcactttg gcagtttgcg cctctctttt taccaatgat tgaactcgtg gtctcagact
     2521 agcctctgct ttttggcttg attttagttg ttctagtaaa ctcggtttag catgaatctg
     2581 attttttaat tgtttatcaa gttttgtttt tgctttctgc atgttttcaa ttaaagtatg
     2641 aattctactc tctgcccctt ctctttgttt aatctcagaa tgaagttcag caatcttgtc
     2701 ttcaatgatt ttcagccttt gaacagctgt tcctttttct tctggaccgc catattcact
     2761 ctgctgtttt acttcatctc gagcattttg ttcttgcctt aacctttctt cggctgcaat
     2821 ctttagtcgc tcgatgctgt ctttttgtgc cagatattga tttagtgtct gtgcagcatg
     2881 atctatattt ctaacaacat cttctttttt tcgttctagt gatacaagac cagagtgtga
     2941 tctcctcttt tgcgagagaa cctcttttag cttcttctct ccctgccttc gtagttttgc
     3001 tacagcttct ttcttagccc tatatgattt agccactgcc gaaagggatg ccatgcgatt
     3061 tagagccgtg ataatcgatt aagtttttgt tatgatcagt atttgacata agagttaata
     3121 tttttaacat attttccaaa tttttcttaa aattttagcc atagtataga acagaacaac
     3181 tagaatttat ttggcaatgc attgaaaaac atatggaatt tcacccatca aagataccaa
     3241 tttcaaaaac ctttcaagca aaaaatgaac atgaagctcc tgatattgcg gcagagatgg
     3301 taagattggg atttgggatt cagaaaggcg cttttagagt tattatgaca aaagacaaaa
     3361 gcgttgcaaa aaaaattggt tttatcatta tgaatgaact caatttgggt ttacgtaaaa
     3421 caaaacaaga acgcgatgta cgatattgga tatacagtta tgatactgaa cattatgcga
     3481 tggtcttgat aagttccaag gtttttgatg cattaggttt ttgatttatc aaagatcatc
     3541 tcgatcttca gtttttttgc aataacatct gcaattaaaa taccaaagat cacgccccct
     3601 attactgtag taggatattc ttgtaatagg tatagcctac ttattgatat caatgctgga
     3661 taaagccata gaagataaca accccgtgga aatcttcttg ataatgcata tgatacaata
     3721 aatgcaaata tggtagatct taccgtgtgt cccgctggaa aggttccgtc tatcttacag
     3781 ggaacaccaa catctgcgcc agatttgaat ggcaaatgtg ctcccatgaa ttgaagatcg
     3841 ggtttttcat acccagtata acatctcatg taagcagtaa ccatggttcc gatcaatagt
     3901 gaaagtagga gtatgagccc tagccgtctt gtctttttca ttataaaaag aatgatggcc
     3961 acaaaaattg gatataagac ccatccaagc tcagaaaagg act
//
LOCUS       DASPUS010000250         5488 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1083356, whole genome shotgun sequence.
ACCESSION   DASPUS010000250 DASPUS010000000
VERSION     DASPUS010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5488)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5488)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5488
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1083356"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..755
                     /locus_tag="VEJ68_06000"
     CDS             <1..755
                     /locus_tag="VEJ68_06000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HXX06353.1"
                     /translation="LDHNLISIIPENPLQPYDMKEIINSILDNHAFFEIHELFAANII
                     VGFGRLNGRTVGIVANQPMVLAGALDIDSSNKAARFIRFCDCYNIPIITFVDTPGYMP
                     GTQQEHGGIIRHGSKLLYAYCEATVPKITTIIGKAYGGAYIAMASKNLGTDMNYAWPT
                     AQIAVLGSEAAVRIMNRKELDSAKDPVALKKQLVDNFTEKFANPYVAASYGTVDTVID
                     PSETRPALIRALESLSNKRERRLPRKHGNINL"
     gene            760..2253
                     /locus_tag="VEJ68_06005"
     CDS             760..2253
                     /locus_tag="VEJ68_06005"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HXX06354.1"
                     /translation="MIEKILIANRGEIAIRVIKTCNALGIKSVAVYSDEDVSSKHVKM
                     ATESYHIGSAPPAQSYLNMEKIVETAQRCGADAIHPGYGFLSENADFADLCEKEKINF
                     IGPSGKSMRLCGDKMLCKAAMAKAKVPTVPGSPGIVEEVQKALNIAHEIGYPVLLKSV
                     FGGGGRGIRLVHNESELKQAFELASGESKAAFGKSALFVEKFLPKIRHIELQLARDKH
                     GNAVHIFERECSIQRRHQKLIEMSPSPAVSQKTRDEIGNLAVKAAIAVDYTNAGTAEF
                     LRLDDGTFYFIEINARLQVEHPVTELVSGLDLVKLQIDIANGKEIPFKQQDLKVNGCA
                     IECRINAEDTFIDFAPSTGKIPDVNIPSGPGVRVDTYLYPGCSVSPYYDSLMAKLITW
                     GQNFEEARQRMKLALSDFYIEGVETSIPLYRTILDTKEFIAGDLSTDFLDRFKILDRL
                     REDIKKEAFQKSDAALAATLIHSEYLKNKIRQHKEHSLRWKAQLDRH"
     gene            2256..2768
                     /locus_tag="VEJ68_06010"
     CDS             2256..2768
                     /locus_tag="VEJ68_06010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007549632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein subunit"
                     /protein_id="HXX06355.1"
                     /translation="MKFKLENTEETLDGEIIKPLGNNEFILKIKGKERNLKIQNISHE
                     KIEFMLDNEYHIAKYLENSTSKITIVVDGVKLTFNKRPDLDKIVYKNSGIDSTTDSQI
                     SLKSQIPGRVVSINVAVGDKVKKSDVICVLESMKMQVSIKAHKDGVIKTLKIKQGASV
                     AKNDVLVEIE"
     gene            complement(2802..3272)
                     /locus_tag="VEJ68_06015"
     CDS             complement(2802..3272)
                     /locus_tag="VEJ68_06015"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020248425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HXX06356.1"
                     /translation="MVNVGDKAPSFTLVDTDLKMRTLDEFKGKKVILSFFVAASSPVC
                     TTEMCTFRDRWDEISKMGAQVIGISNDGPFANKAFAASQHLNFPVLGDYKSQTIRDYD
                     VLMPDLLHVKGYDAAKRSVFIVDEKGTIVYKWVSDNPLIEPNYKEIVDFLKKGN"
     gene            3516..3848
                     /locus_tag="VEJ68_06020"
     CDS             3516..3848
                     /locus_tag="VEJ68_06020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HXX06357.1"
                     /translation="MFTFAVVATGPALILSRMIAPRRTPSPVKFLPMESGQVPSGEGR
                     THFMMQYYSYVLMFVVFDVMSIFLYAWGSSVLSLPKAATLPIIAFLAVMFAAFAFALY
                     QSGRKNIW"
     gene            3891..4418
                     /gene="nuoB"
                     /locus_tag="VEJ68_06025"
     CDS             3891..4418
                     /gene="nuoB"
                     /locus_tag="VEJ68_06025"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HXX06358.1"
                     /translation="MLKEFINPETAPHATNVLVGKLGDILVRAVGKPLEYAINWGRIW
                     SLWPVHLETACCSVEFGAASSPRYDVERFGIIEAFGSLRQCDLIVVMGTITRKMAPRL
                     RMVYDQMPDPKYVIAMGACAITGGLYFDSYNVLPGIDGVLPVDIYVPGCPPRPETLIQ
                     GCMLLQEKIKRMKAT"
     gene            4421..5068
                     /locus_tag="VEJ68_06030"
     CDS             4421..5068
                     /locus_tag="VEJ68_06030"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HXX06359.1"
                     /translation="MTSENEKDGGSVDNLDEESDNSSSLTKDEAKKFYGEKGIDLSPD
                     VPVHPKPIPYFEKSLSDKVASKFGSKVSVDYVRPNRIKLITKRDDILDVAYFVRDELG
                     YDHAESVSGVDYPDSREIEIIYHFGSYTNEKLSNQILALATKVPREDIPNPGRDSSRT
                     PSLRDVFYSVEFHERECFEMFGVYFEGHPDNRRLLLPEDWADIPPFRKDFKIKGR"
     gene            5070..>5488
                     /locus_tag="VEJ68_06035"
     CDS             5070..>5488
                     /locus_tag="VEJ68_06035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012214662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HXX06360.1"
                     /translation="MTTQLPPGMHIETVDEKIMTLNVGPQHPGSGHMRLIIKVDGDYI
                     VSCDPDPGYVHRGEEKMAEYRNYIQNIPHLERPVIHDSSNILYPYCLGVEELLGIEVP
                     ERAKYIRVIAAELNRCIYILYWLAIYGIFLGHSTMFM"
BASE COUNT         1855 a          961 c         1069 g         1603 t
ORIGIN      
        1 gacttgatca caatctgatc agcataattc cagagaatcc gttgcagcca tatgacatga
       61 aagaaatcat aaattcaata ttggataacc atgcattctt tgaaattcat gagctgtttg
      121 cagcaaacat aattgtagga tttggtagat taaacggaag aactgttgga attgttgcaa
      181 atcaacctat ggttctagca ggagcactag acattgattc atcgaacaaa gcagccagat
      241 ttattagatt ttgtgattgt tataatattc caattattac ttttgttgat actccaggat
      301 acatgccagg tactcagcaa gaacatggag gaatcatacg tcatgggagt aaactcttgt
      361 atgcatattg tgaggctaca gtgccaaaaa ttaccaccat aataggaaaa gcctatggtg
      421 gtgcttacat tgcaatggca agcaagaatc taggtactga tatgaattat gcctggccaa
      481 cagcccaaat cgcagttctg ggttctgagg cagcagtaag aataatgaac agaaaggaac
      541 tcgactcagc aaaagatcca gttgccttaa aaaaacaact tgtcgataat ttcacagaaa
      601 aatttgcaaa tccttatgtt gcagcatcat acggaacagt tgatacagta atcgatcctt
      661 cagaaacaag acctgcacta atccgtgcat tagaatctct ttcaaataaa agagaacgaa
      721 gacttccacg aaaacatggg aacatcaatt tatagagata tgattgaaaa aattcttatt
      781 gcaaatcgtg gagaaattgc aattcgtgtg ataaaaacat gtaatgcgct tgggataaaa
      841 tcagttgctg tttattctga tgaagatgtt agctctaaac atgttaagat ggctactgaa
      901 tcgtaccata taggatcagc tccaccagcg caaagttatc ttaacatgga aaaaatagta
      961 gagactgcgc aacgctgcgg tgctgatgct atccatccag gttatgggtt tctatcagaa
     1021 aatgcagact tcgctgatct atgcgagaaa gaaaaaatca acttcatagg accttctggt
     1081 aaatcaatga gactttgtgg agacaagatg ttatgtaaag ctgccatggc aaaagcaaaa
     1141 gtccccactg ttcctggaag tcctggaata gttgaagaag ttcaaaaagc tctcaacatc
     1201 gcacatgaga ttggttatcc tgttttacta aaatcagtct ttggcggtgg aggaagagga
     1261 ataagactag ttcacaatga atcagaactc aaacaagcct ttgagcttgc atctggagaa
     1321 tcaaaagctg cttttggcaa gtcagctctt tttgttgaaa aattcctacc aaaaattaga
     1381 cacatcgagt tacaacttgc gcgagacaag catggtaatg cagtgcacat atttgaaaga
     1441 gagtgttcaa ttcaaagaag acatcaaaaa cttatagaaa tgtctccttc tccggctgtg
     1501 agccaaaaaa ctcgagatga aataggtaac cttgcagtta aagcagcaat tgcagtggac
     1561 tatactaatg caggtactgc tgaattttta agactagatg atggaacttt ctatttcatt
     1621 gaaataaatg caagactaca agttgaacat cccgttactg aattagtctc tgggcttgat
     1681 cttgttaaat tgcagataga tattgctaat ggaaaagaga taccattcaa gcaacaagat
     1741 cttaaggtta acggctgtgc aattgaatgt agaataaatg cagaagatac attcattgat
     1801 tttgctccat caactggaaa aattcccgat gttaatattc catcaggtcc aggagtaaga
     1861 gtagatacat atctctaccc gggatgctca gtctctccat actatgactc gctaatggct
     1921 aagctcatta cttggggtca gaactttgaa gaagcaagac aaagaatgaa gctggcactc
     1981 tccgattttt acatagaggg cgtcgaaaca tccatcccat tatatagaac aattcttgat
     2041 actaaggaat tcattgctgg agatctctcc accgactttc ttgatagatt caaaatacta
     2101 gataggttgc gtgaagacat caaaaaggag gcattccaaa aatctgatgc tgctcttgct
     2161 gcaacactga tacactctga atacctcaaa aacaaaataa gacaacataa agagcatagt
     2221 ctgcgttgga aggcacaatt ggataggcat taactatgaa gttcaaatta gaaaatactg
     2281 aagagacttt agatggagaa attatcaaac cccttggtaa taatgaattc attcttaaaa
     2341 taaagggcaa agaacgtaat ctgaaaatac aaaacataag ccatgaaaaa atagaattca
     2401 tgttagacaa tgaatatcat attgcaaaat atcttgaaaa ttcaacttct aagataacca
     2461 tagtagtcga tggagtaaag cttactttta acaaacgtcc agatctggac aagatcgttt
     2521 acaagaattc aggaatagat tctacaaccg actcacagat ttctcttaaa agtcaaattc
     2581 ctggtagagt tgtttctata aacgtagcag tgggagataa agtaaaaaaa agtgacgtaa
     2641 tatgcgtact tgagtctatg aaaatgcaag tttctatcaa agctcacaaa gacggtgtaa
     2701 tcaaaacttt gaaaataaaa caaggtgcat ctgttgcaaa aaatgacgtc ctagtagaaa
     2761 tcgagtaaaa aatttaattt attaaaataa attgaaagga attaatttcc ttttttcaga
     2821 aagtctacta tctctttgta gtttggttct attagcggat tatcagatac ccacttgtag
     2881 acaatagttc ccttttcatc tactatgaat acagatcgtt ttgccgcatc atatcctttg
     2941 acatgtaaca ggtctggcat gagaacatca taatctcgga tagtttggct tttgtaatca
     3001 cctaacactg gaaaattaag atgctgtgat gcagcaaatg ctttgtttgc aaaaggtcca
     3061 tcattgctta ttccaattac ctgtgctccc atctttgata tttcatccca tctatctctg
     3121 aaagtacaca tctcagtggt gcacaccgga gaactcgcag ctacaaaaaa cgaaagaatt
     3181 actttttttc ctttaaattc atccaaggta cgcatcttga ggtctgtgtc taccaaggta
     3241 aaagatggtg ctttatctcc tacatttacc atgaaaaatc tttgttgcag tcatatatca
     3301 atcattttca aaaatgatta ttttgttatt atacacgttc tgaatttttt tataaatgaa
     3361 tgtatattat tgattgattt gtagaaaatt gataaaaaat tacttttgga ttaaaataat
     3421 gatcgcagaa tgtgcatagc tttttatatt ctcctaaggg gttgttagct gctttggtag
     3481 gagaagctgc tagtagtttc agtcctgttt tactaatgtt tacatttgca gttgttgcaa
     3541 caggcccagc gctaattctt tcaagaatga ttgctccgcg acgaactcct agtccagtaa
     3601 agtttctccc tatggaatca ggtcaagttc cttcaggaga aggacgaaca catttcatga
     3661 tgcaatatta ttcctatgtc ttgatgtttg tcgtatttga tgtaatgtca atcttcttat
     3721 acgcttgggg aagtagtgtc ctgagtttac caaaagccgc aactcttcca attattgcct
     3781 ttcttgcagt aatgtttgct gcctttgcct ttgccttgta tcaatcaggg aggaaaaaca
     3841 tttggtaact cttaaatcaa ctaatcaaaa agttgaggta ggtcagaaga ttgcttaaag
     3901 aattcattaa tccagaaact gcaccacatg caaccaatgt cctagtggga aaactcggtg
     3961 atatccttgt aagagcagtt ggcaaaccct tagaatatgc tataaactgg ggaagaatct
     4021 ggtctctatg gccagtacat cttgagaccg catgctgtag cgtggaattt ggtgctgcct
     4081 caagtcctag atatgatgta gaacgatttg gaattataga agcgtttggc tcacttaggc
     4141 aatgcgatct gatcgtagta atgggaacaa ttaccagaaa aatggcgccg agacttagaa
     4201 tggtttacga tcaaatgcca gatccaaaat atgtgatagc tatgggcgca tgtgcaatta
     4261 caggtggatt gtactttgat tcatacaacg tgcttcctgg cattgacgga gtactccctg
     4321 ttgatatcta tgttccaggt tgtccaccaa gaccagaaac tctaattcaa ggatgcatgt
     4381 tacttcaaga aaaaattaaa cggatgaagg ctacttagca atgacttctg aaaatgaaaa
     4441 ggatggagga tccgttgata atttggatga agaatctgat aattcaagtt cattaacaaa
     4501 agacgaagcc aaaaaattct atggagaaaa aggaattgat ctatcgccag atgtacctgt
     4561 tcatccaaaa ccaattcctt attttgaaaa atcgctttct gataaagttg cttcaaaatt
     4621 tggttccaaa gtaagcgtag attatgtaag gccaaataga atcaaactga taaccaaaag
     4681 agatgacata ttagatgtcg catattttgt gcgtgacgaa ctgggctatg accatgcaga
     4741 atcagtttca ggtgtagatt atcctgattc aagagaaatt gaaataatct atcattttgg
     4801 ttcatataca aacgaaaaac tgagcaatca gattcttgca ttggcgacaa aagttccacg
     4861 tgaagatatt cctaatccgg gacgcgatag ctcacgaacg ccatccttgc gagatgtatt
     4921 ttacagcgtt gagttccatg agagagaatg ttttgagatg tttggagtat attttgaagg
     4981 tcatccagat aatagaagat tactcttgcc tgaggattgg gcagacattc caccatttag
     5041 aaaagatttc aagataaagg gaagataaaa tgactacaca actacctcca ggaatgcata
     5101 ttgaaaccgt ggatgaaaaa ataatgacac taaatgtagg acctcaacat ccaggttctg
     5161 gacatatgcg attgataatt aaagtcgatg gtgattacat tgtttcatgt gatcctgatc
     5221 caggttatgt acatcgagga gaagaaaaaa tggctgaata tagaaactat attcaaaaca
     5281 tccctcatct tgaaagacca gtaattcatg actcttccaa tattttgtat ccatattgtc
     5341 ttggagtaga agaattgtta ggaattgaag ttcctgaaag agcaaaatac attcgagtta
     5401 ttgcagcaga actgaatcgt tgtatctata ttttgtattg gttagcaatc tatggaatat
     5461 ttttaggtca ttctaccatg tttatgtg
//
LOCUS       DASPUS010000251         4325 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1083509, whole genome shotgun sequence.
ACCESSION   DASPUS010000251 DASPUS010000000
VERSION     DASPUS010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4325)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4325)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4325
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1083509"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1472
                     /locus_tag="VEJ68_06040"
     CDS             <1..1472
                     /locus_tag="VEJ68_06040"
                     /inference="COORDINATES: protein motif:HMM:TIGR02148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fibro-slime domain-containing protein"
                     /protein_id="HXX06361.1"
                     /translation="FIGIKNKILHKSHTRKSISTIVSTALMIGAMALMGTTAVSFTQN
                     SVITHENSMGTQYSNATNKIKESMAMENFWYDTPHQQLDISIKNTAQIGMTIRQIQVQ
                     GSNSQVTSLKQFSIVSGSDYTATISYKWMGDPIDVYVTTARGSIFRFHLTSPTDGILI
                     INKVSILGNGNFSFNGDLGRFNVTTAGYVPSANLDKYGNLILAGTLRDFNGTEYKDKN
                     GVWHSPTGSHPDFEKPCIHSSDCPYGEWDGIVLPNLGSDGEPVYNNSTDQFHSFTNGF
                     TRFYQWYHDTPGVNIKTPLNLNLTSLHTSPPSWQFSSTSFFPVDNQLWNCCGYDSGWT
                     WHNFSFTYEIHNSFTYLGGETFTFTGDDDVWLFIDNKLVVDIGGVHSSITKSISLDSL
                     GLTKGNSYNFDFFYAERHTTSSDMTMTTSIQLQNNGVGNTAAFFVDPGTYKVNEIVPA
                     GWHILNEQCTNGYTNINSTEILISVPKGTTTCTFTNTLN"
     gene            1489..3180
                     /locus_tag="VEJ68_06045"
     CDS             1489..3180
                     /locus_tag="VEJ68_06045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06362.1"
                     /translation="MNITKINGKNRRGLSSIVGGVFFLIIMVTGASYILYSMNQLDTF
                     SQAIISKNQQDRDKVQENFQITSVTLANNKFNVTVQNTGMIPINITRLWVENKTDATW
                     PISKYVVNQIVTPGQTLSKIGQTLPLYAKSTQAYGLTLVTDRGNSEVALVNSASVKPL
                     MIQLFVLPDTVPTGFDTTVLFAVTNNMTNNGGLSNLQPNIKVGSYGATATLVSGPEPP
                     LYPFLSQGDTAYFKYVYSISGTAGQKVNFTASLQNGYLGNSITKNVTVTAVQNTLLNG
                     LKLSMVNKNVGYSVTASDTIINVNATAGGNPTTITLPSANTVTNETFIIKKIDYGTNV
                     IMVKTSGGTIDGFANENMTLAKTMLMVQSNGTGYNTLIYPQMSMDSFRVAGKSLNHWF
                     GSFAVPFTPTTITPSTTAITATPFTIGNPIRIDKIQLEVSTSVAGSTCRMGIYTDNGT
                     GYPQYLVMGSDVGTVSGASTGVQTNTFTTPITLPSGGYWLANQCSTATTIQLRAIPST
                     AIQNVLGVLSTMGITATGTGWQATFSYATFPHVFPTVGSTVITSNVPEILIRQIG"
     gene            3466..3975
                     /locus_tag="VEJ68_06050"
     CDS             3466..3975
                     /locus_tag="VEJ68_06050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HXX06363.1"
                     /translation="MEETEKTGQKWIAIKDKSLIMLILQSYADPDKKKILDATEHSRM
                     ILDIIEVCKLPQTSTYRKINSLIRNGLLVPDGQVSMKYGKNVNTYVTLFKNVEINIVK
                     NDVQVRAKISDISKNAVLRIMREKIIHSKKFSADTGKDLSDAIHRSIQKNGSKSVVPY
                     LLKERIIRV"
     gene            4035..>4325
                     /locus_tag="VEJ68_06055"
     CDS             4035..>4325
                     /locus_tag="VEJ68_06055"
                     /inference="COORDINATES: protein motif:HMM:NF013499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HXX06364.1"
                     /translation="MKTMIDTELGNWRRTIYSNNIEPSLEGKEVIVMGWISSVRDHGN
                     LVFVMLNDKEGEMQVTAKAGVCPNEIREELVKLKEQSTIAVKGTIKPSNKAPH"
BASE COUNT         1515 a          758 c          811 g         1241 t
ORIGIN      
        1 tgtttattgg tataaaaaac aaaattctac acaaaagcca taccagaaaa agcatcagta
       61 ccatagtaag cactgcattg atgattggcg ccatggcatt aatgggaaca actgcagttt
      121 catttacaca gaactccgtt attacccatg aaaattcaat gggaacacag tattcgaatg
      181 cgacaaataa aattaaagag tcgatggcaa tggaaaattt ttggtatgat acgccacatc
      241 aacagctcga catatctata aaaaacactg cgcagattgg aatgacaatt agacaaattc
      301 aagtgcaggg ctcaaacagt caggttacta gtttaaaaca attctcaatt gtttctggtt
      361 ctgattatac tgcaacaatt tcatataagt ggatgggtga tcctattgac gtctatgtta
      421 ccactgccag aggttcaatt ttcagatttc atcttacatc gcccactgat ggaattttaa
      481 taataaacaa agtctcaatt ctaggtaacg gaaattttag ttttaatggg gatcttggaa
      541 ggttcaatgt tacaaccgca ggttatgttc cttctgcaaa tcttgataaa tatgggaatc
      601 taatattggc aggtaccctt cgcgatttta acggaacaga atacaaagat aaaaatggtg
      661 tctggcattc tcctacagga agtcatcctg attttgagaa accatgtatc cattctagtg
      721 attgtccata tggcgaatgg gatggaattg ttttacccaa cttggggtca gatggggaac
      781 cagtttacaa taatagtacc gaccagttcc actcttttac taatggtttc acaagatttt
      841 atcagtggta tcatgacaca ccaggtgtaa atattaaaac accattgaat ctaaatctca
      901 caagcctgca tacatctcct ccttcatggc agtttagtag cacaagtttt ttccctgtag
      961 ataatcaact atggaattgt tgtggctatg atagcgggtg gacatggcat aatttcagct
     1021 tcacatatga gattcataac tcatttactt atctgggcgg tgagactttt acgttcacag
     1081 gtgacgacga tgtatggctc ttcattgata ataaactcgt cgttgatatc ggaggtgtgc
     1141 attcttctat tacaaaatcc ataagtctgg attctttggg gttaactaag ggaaatagct
     1201 ataattttga ctttttttat gcagagcgtc atacgacatc ctctgatatg actatgacaa
     1261 catcaattca acttcaaaat aatggggtcg gaaataccgc tgcttttttt gttgatcctg
     1321 gaacatacaa ggtaaatgaa atagtcccag ctggatggca tatacttaat gaacaatgta
     1381 ccaatggcta tactaatatc aattctactg agatactgat atctgtacca aaagggacta
     1441 cgacatgtac atttacaaac actctcaatt aggtgtgaaa taaagaaaat gaatataaca
     1501 aaaattaatg gcaaaaatag gagaggactg agttcaatcg taggtggagt tttttttcta
     1561 ataataatgg tgactggagc aagttatatc ttgtatagca tgaatcaatt ggacacattt
     1621 agtcaagcaa taatttctaa aaatcagcag gatagggata aagtacaaga aaattttcaa
     1681 ataaccagtg taactttggc taacaacaag tttaatgtta cagttcaaaa tactggaatg
     1741 attccaataa acataactag attgtgggtg gaaaataaga ccgatgcaac atggcctatc
     1801 tcaaagtacg tggtaaacca aattgttact cctggtcaga cattgtcaaa aataggacaa
     1861 actttacctc tttatgccaa gtccactcag gcatatggct tgacacttgt tacagatcgt
     1921 ggaaattctg aggtagcctt ggtaaactct gcaagtgtaa aacccctgat gatacaactt
     1981 tttgtgcttc cagatacagt gccaacaggc tttgatacta ctgttctttt tgcagtaaca
     2041 aacaatatga caaataacgg ggggttgtca aatctccaac cgaatattaa ggtgggatct
     2101 tatggtgcga cagctacttt agtgtcagga cctgaacctc cactctatcc atttttatca
     2161 caaggagata cggcatactt caagtacgtt tattcaattt caggtactgc cggtcaaaag
     2221 gtaaacttta cagcttcact tcaaaatgga tatcttggaa attctataac aaaaaatgtt
     2281 actgtaacag cagtacaaaa cacattactt aacggattga aactttcaat ggtaaacaag
     2341 aatgtaggct atagtgttac agcttctgat acgataataa atgtaaacgc tacagcgggt
     2401 ggaaacccta caacaataac cctgccaagt gctaatactg ttacaaatga aacctttatc
     2461 ataaagaaaa tcgattatgg cacaaatgtc ataatggtaa aaacttctgg cggaacaata
     2521 gatggttttg ctaatgaaaa tatgacactt gctaaaacta tgctgatggt ccaaagcaac
     2581 ggtactggat ataacacttt aatttatcca caaatgtcga tggatagttt tagggttgca
     2641 ggaaaatcat taaaccattg gtttggttct tttgctgttc cattcacgcc aacaacaatt
     2701 acaccttcga caacagcaat aacggctaca cctttcacta tcggaaaccc gattagaatt
     2761 gataagatac aattagaggt aagcacatct gttgccggat ctacttgtcg tatgggtatc
     2821 tatacagata acggaacagg atatccacaa tatttggtaa tgggttcgga tgttggcact
     2881 gtatctggag ctagtacggg cgtacaaact aatacgttta caacgccaat aacattgcca
     2941 agtggtggtt attggttagc aaatcaatgc agtacagcaa cgacgataca actgagagca
     3001 ataccaagca ccgcaataca aaacgtttta ggtgtattgt ctacaatggg tataactgca
     3061 accgggactg gatggcaagc tactttttca tatgctacat ttccacatgt ctttcctacc
     3121 gtgggctcta cggtaataac atcaaatgtg ccggaaattc taatacggca aataggttag
     3181 tgacaagtcc tttttacaaa atctaaaaca gatattttgt gttctagtgt acatcatagg
     3241 aggtatagta caacacagaa aaagtggttg cacaaaaatt aatccatgta tgttcatata
     3301 gatttcaata gtgaataatg ataagcggca atagtacatt cggtaaaaat taggtacatg
     3361 caacttcaat tgccatttga aagaatcaga tgaaaaatat ccatttttgg aaattagtca
     3421 aaaactaaaa tatgattata tatctagtct ctttagaaga caataatgga agaaaccgag
     3481 aaaacaggac aaaaatggat tgcgattaaa gacaagtcat tgataatgtt gatactacaa
     3541 tcttatgctg acccagataa aaaaaagata cttgatgcaa cagagcattc cagaatgatc
     3601 cttgatatta ttgaagtatg taaattacct cagacatcaa cttatagaaa aattaattct
     3661 ctcataagaa atgggctact agtaccagac ggtcaagtct ccatgaaata tggaaaaaat
     3721 gtcaatacct acgtgacgtt atttaaaaat gtggaaatta atatcgtgaa aaatgatgtt
     3781 caagttagag caaaaattag tgacattagc aaaaatgccg tcttgagaat aatgcgtgaa
     3841 aagataatcc actcaaaaaa attctctgct gatacaggca aagatctctc tgacgcaata
     3901 catcggagca ttcaaaaaaa tggttcaaaa tctgttgttc cttatctgct aaaggaacga
     3961 attatccgag tctaggataa ttaagtaata acaactcatc gatacataaa ttaacactaa
     4021 gcagaacaca tttgatgaaa acaatgatag atacagaact tggtaactgg cgaagaacta
     4081 tctattctaa taatattgaa ccttctcttg agggaaaaga agtaattgta atgggttgga
     4141 tttcaagtgt aagagatcat ggaaatcttg tctttgttat gctcaatgat aaagaggggg
     4201 aaatgcaggt tactgcaaaa gctggtgttt gccctaatga aattcgagaa gaactggtta
     4261 aattaaaaga acaatcgacc atagcagtga agggtaccat aaaaccctca aacaaggcgc
     4321 ctcat
//
LOCUS       DASPUS010000252         4098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1630391, whole genome shotgun sequence.
ACCESSION   DASPUS010000252 DASPUS010000000
VERSION     DASPUS010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4098)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4098
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1630391"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            205..765
                     /locus_tag="VEJ68_06060"
     CDS             205..765
                     /locus_tag="VEJ68_06060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06365.1"
                     /translation="MKIVHREDTGYKIFLYIFYACAFIMASIAFYGIYGTYQEWEKNG
                     TYVLGELLEKTEFPTTHFAKLTSWLFFSTIIGWYCVSKIGSRKTTVIPSWRRTLVQLM
                     LVGLASICLYETIYNFVVLNAQITAGIVNGKVPDIDSLTVAYPDPSRPWNLNFATKAF
                     LAAFIISSHSLYLSSKPSKKQDTLDA"
     gene            800..1855
                     /locus_tag="VEJ68_06065"
     CDS             800..1855
                     /locus_tag="VEJ68_06065"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HXX06366.1"
                     /translation="MDVAEKIKLITRDPTEEVVTLEELETLLNTNPHPKHYIGLEISG
                     FLHLGSLIVTGFKINDFIKAGIKCVVFLADWHTYINNKLGGDWDKIQKVSKYYADAFK
                     MFCPGVEIIEGSQLYESRKGYWMDLVKFAKNMSLDRTMRSLTIMGRSAQKEKIDLGQL
                     FYPPMQAVDIHTMDLDIVHAGMDQRKIHMLVREIFPKMKWKVPVAVHHHILAGLGEPE
                     VSSDADSEFISSKMSKSKASSGIFIHDSDDEITSKFKKAWCPEGIVDKNPILEIFRYV
                     VFHEFNEIIVERPEKFGGNVRYTSYLDLQKDFAEKKLHPSDLKSAASKYVIDIIKPIR
                     EKIVLTDELYDAIRQTT"
     gene            complement(1848..2828)
                     /locus_tag="VEJ68_06070"
     CDS             complement(1848..2828)
                     /locus_tag="VEJ68_06070"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03560 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HXX06367.1"
                     /translation="MKSIQVGLTLPQGWLDEFPTKDPNDYFSFTKEVALKAEKLGYAA
                     AYVYDHFVPYPGNNRNGPFLEAYTLLSAISSITTKLRIGQVVTCNSYRHPSMLAKITS
                     TLDVISNGRLEFGIGAGWFEYEYNSYGYKFDNPLSRIEQLDESISIIKKMWKNERSSF
                     KGKHYFVKNAICNPKPIQQPHPPVMVGGGGNKLMEVVAKHATRYNHPFGTPSILEEKI
                     NHLKSKCKLIRRNPEEIENSVLLRVLVGKDSDDIKEIVSKLKKKNESIAEFILRSKDS
                     IALGTPEEVTNYLNQYVNIGIRYLIVNFIGLSKSLKMLSLFSQKVIPYLR"
     gene            complement(2830..3618)
                     /gene="cobJ"
                     /locus_tag="VEJ68_06075"
     CDS             complement(2830..3618)
                     /gene="cobJ"
                     /locus_tag="VEJ68_06075"
                     /EC_number="2.1.1.131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030789 - precorrin-3B
                     C17-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-3B C(17)-methyltransferase"
                     /protein_id="HXX06368.1"
                     /translation="MTGKLYIVGVGPGHHDHMTFRAKEVITESDTIVGYETYVNLVED
                     LIEGKEVHRYAMTQEVERAHQCIELAKSGKIVSLVSSGDPGIYGMAGLIYEMLAEERW
                     DRKTGLYVEIVPGVSSLNSCAALVGSPLMTDFAVVSMSDLLVPWEIIVKRVEAAAQGD
                     FVIVIYNPASKKRIHQLQDTRKILLKYRSPNTPVAIIKGAYRESQEVVLTDLENMENH
                     SDKLGMITTVIVGNSSTFRYDDLMINPRGYTSKYNIVEPQKSRN"
     gene            complement(3694..>4098)
                     /locus_tag="VEJ68_06080"
     CDS             complement(3694..>4098)
                     /locus_tag="VEJ68_06080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015019983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HXX06369.1"
                     /translation="ALGTAATIFSTLAKAGVNIMMISQSPSESSISIIVKKSDLDKAV
                     NALEMNLLGKIIKKVDVTLDVSIIALIGSGMRGIAGVASKVFTAVAKKRVNVIMIAQG
                     SSELNLAFVVKDSDCNAAVQALHDEFELAKAT"
BASE COUNT         1292 a          754 c          712 g         1340 t
ORIGIN      
        1 aactcgtgta cctcctgcat tagcagccga tgttagagat ttttccgata aaactgcgtg
       61 tacttccttt atttcctcac tctcaattat tggcacatta ttggaatttt caattataca
      121 ataacaaatt tacaactata aataaacttc ctgaaggaga ttaaaaccaa ttcttatatt
      181 tcaggtatca gcaatcgtag ctaaatgaag atcgtacata gggaggacac gggatacaaa
      241 atatttctct atatctttta tgcatgtgct ttcataatgg catcaatagc tttctatggc
      301 atttatggca cttatcaaga atgggaaaaa aatggtacct atgtattggg tgaattgctg
      361 gagaagacag aatttcccac aactcatttt gcaaaactga catcatggtt gttcttttct
      421 acaataatcg gttggtactg tgttagcaag attggttcaa ggaaaacaac agtaattcca
      481 tcatggcgac gtacccttgt acaattgatg ttagtgggac tcgcctcaat ttgtctttat
      541 gaaacaattt acaactttgt tgtgttaaat gcacagatca ctgcaggtat tgtcaatgga
      601 aaggttccgg acatagactc tttgaccgtg gcttatcctg atcctagcag accctggaat
      661 cttaactttg caacaaaagc attccttgcg gctttcatca taagttcaca ttcattgtac
      721 cttagcagta aacctagcaa gaaacaagac actcttgatg cgtaacttta taggatcaca
      781 aaataagatt tgactcgcag tggatgttgc agaaaaaatc aaactcataa caagagatcc
      841 tactgaagaa gtagttacac tggaagagtt agaaacttta cttaatacta atccacatcc
      901 aaaacattac atcggtctgg aaatttcagg attcttacac cttggtagcc tgatagtcac
      961 gggatttaag ataaacgatt tcatcaaagc tggtataaag tgtgtagtat ttctggcaga
     1021 ttggcacaca tatatcaaca ataaacttgg aggagattgg gataagattc aaaaagtctc
     1081 aaaatattat gctgatgctt tcaagatgtt ttgtccaggt gtggaaatta ttgaaggttc
     1141 acaattatac gaatcaagaa aaggatattg gatggatcta gtaaaatttg caaaaaacat
     1201 gtcactagac agaacaatgc gttcacttac tataatggga agaagcgctc aaaaggaaaa
     1261 aattgacctc ggtcagttat tttatcctcc tatgcaagca gtcgacattc atacaatgga
     1321 tttagatata gtacatgctg gtatggacca aagaaaaata cacatgcttg ttcgagagat
     1381 ctttccgaaa atgaaatgga aagttcccgt tgcagttcat catcacatac ttgctgggct
     1441 aggtgagcca gaagtaagct ctgatgctga ttcagaattt atctcaagca aaatgagtaa
     1501 atcaaaagcc tcatcaggaa tattcattca tgattcagat gatgaaatca catctaaatt
     1561 caaaaaagct tggtgtcctg aaggaatcgt agataagaac ccaatacttg aaatttttag
     1621 gtatgtagtt tttcatgaat tcaacgaaat tattgttgaa agacctgaaa agtttggtgg
     1681 taatgtaaga tataccagtt atctagatct acagaaagac tttgcagaaa agaaattaca
     1741 tccttcagat ttgaagagtg ctgcttcgaa atatgtaatt gatataatca aacccataag
     1801 ggaaaagata gttttgacag atgagcttta tgatgccata agacaaacta cctaagataa
     1861 ggtatcacct tttgtgaaaa taatgacaac attttcagag attttgacaa gcctataaag
     1921 ttgacaatca aatagcgaat tccaatgtta acatactgat ttagataatt agttacttcc
     1981 tcaggagttc ctagtgcaat gctgtctttt gagcggagaa taaactcggc aatagattca
     2041 tttttctttt ttaattttga gacaatttct tttatgtcat cactgtcctt gccaaccaaa
     2101 actcttaaca agacagaatt ttcaatctcc tctggatttc ttcgaattaa tttacatttg
     2161 gattttagat gattaatctt ttcttccaat atgctaggtg tgccgaaggg atgattgtag
     2221 cgagttgcat gttttgctac aacttccata agcttgtttc caccacctcc aaccataaca
     2281 ggtggatgtg gttgttgtat gggttttgga ttgcatatgg catttttcac aaagtaatgt
     2341 tttcctttaa aacttgatct ctcatttttc cacatttttt taattatgga tatagattca
     2401 tcaagttgct ctattctgga taatggatta tcaaatttat acccgtagga attgtactca
     2461 tattcaaacc acccagcacc aataccaaac tctagtctgc cattgctaat cacatctagt
     2521 gttgaggtaa tcttagctaa catcgatgga tgcctataag aattacaggt tacaacttgg
     2581 ccaattctta attttgttgt aattgaagat attgcagaaa gtagggtata tgcttcaaga
     2641 aaaggtccat tgcgattatt tccaggataa ggaacaaaat gatcataaac ataggccgca
     2701 gcgtatccaa gtttttcagc ttttaatgca acctctttag taaaagaaaa gtaatcgtta
     2761 ggatcctttg tcggaaattc atccagccat ccttgaggta aggtaagacc tacctggatt
     2821 gatttcatgt tagtttctac ttttttgtgg ttctactata ttgtattttg atgtatatcc
     2881 acgaggatta atcattagat catcatatct gaaggtagaa gaattgccca caattactgt
     2941 agtaatcatt ccaagtttgt cagaatgatt ttccatgttt tccagatctg taagaacaac
     3001 ttcttgagat tccctgtatg ctcctttaat tattgcaact ggagtatttg gagatctata
     3061 ttttagtaaa atctttcttg tatcttgaag ctggtgaatt cttttcttac ttgcaggatt
     3121 gtatatcaca attacaaagt caccttgtgc agcagcttct acccttttta ctataatttc
     3181 ccatggtaca agtaaatcac tcatgctgac tacggcaaaa tcagtcatca ggggcgaacc
     3241 gaccaaagct gcacatgaat taagagatga tacaccggga acaatttcaa catacaaacc
     3301 tgtcttccta tcccatctct cttctgcaag catttcatag atcaatccag ccataccata
     3361 gatacctgga tctccgcttg agaccaatga gactatctta cctgattttg caagctcgat
     3421 gcattgatgc gcacgttcta cttcttgagt cattgcatat ctatgaacct cctttccttc
     3481 aataagatcc tctactaaat ttacataagt ttcatagcca acaattgtat cactttctgt
     3541 aattacctct tttgcgcgaa aagtcatatg atcatggtga cctggtccta caccaacaat
     3601 gtataactta ccggtcatta ttagtaggaa atttttagag caaatttatc ccttttcatg
     3661 tactgtgaac gagtccgtta ttggttagtt tgattatgta gcttttgcaa gttcaaattc
     3721 atcatgcaat gcctgcactg cagcattaca atcagaatct ttgactacaa aagcaaggtt
     3781 tagttcagag gaaccttgtg cgatcattat cacatttact cgtttttttg caactgcagt
     3841 aaatactttt gatgcaacac cagctattcc tctcattcca gaaccaatta atgcaataat
     3901 tgaaacatct aaagtaacat cgactttttt tattattttt ccaagtagat tcatttcaag
     3961 tgcgtttact gctttgtcta aatcactctt ttttacaatt attgaaatgc ttgattctga
     4021 gggactttgt gagatcatca ttatgttaac gcctgctttg gcaagtgttg aaaatatagt
     4081 ggctgctgtt cccaaagc
//
LOCUS       DASPUS010000253         6008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1776151, whole genome shotgun sequence.
ACCESSION   DASPUS010000253 DASPUS010000000
VERSION     DASPUS010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 6008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6008)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6008
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1776151"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..499)
                     /locus_tag="VEJ68_06085"
     CDS             complement(<1..499)
                     /locus_tag="VEJ68_06085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010192076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HXX06370.1"
                     /translation="MANIEEMRKIQFTGKSSYIVSLPKQWVADMGLKQGDQVAVMRQG
                     ISTLQIVPLKHHNKPLNTEDATIEIKQDDEDAVIVRKLISLYLLGFNIINVKPKLGRL
                     KPSQRNAVKEAVKGILMGTEIIADSTEGITIQVLINLFELSVDGALKRMLIIAKSMQN
                     DALLAL"
     gene            605..1072
                     /locus_tag="VEJ68_06090"
     CDS             605..1072
                     /locus_tag="VEJ68_06090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010192079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PUA domain-containing protein"
                     /protein_id="HXX06371.1"
                     /translation="MDSVLKIKHTLDALFGIGISKCLPKDIQFTYSKRTGRIQHVYQN
                     ESLLCTLRTDGGLAITPYFAQILMKSKKFRENCVEIDDDSKPFIENGNSVFSKHVTWC
                     GKNILIGSDVPVLYRNNVIAVGKAILSSKMIKSLKKGAAVKIRDSLKSLVKGE"
     gene            1080..1421
                     /locus_tag="VEJ68_06095"
     CDS             1080..1421
                     /locus_tag="VEJ68_06095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016940006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nascent polypeptide-associated complex protein"
                     /protein_id="HXX06372.1"
                     /translation="MMRGGNREMRRMLDRMGLEMKEVNNVQEVIIKTDTKEIIITKPA
                     VTEMKAKDNSIFQVIADSYEERELEVHIFSQDDITLVAQQANVSTEEATKALTEAKGD
                     LARAILLLTTK"
     gene            1514..2137
                     /locus_tag="VEJ68_06100"
     CDS             1514..2137
                     /locus_tag="VEJ68_06100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06373.1"
                     /translation="MATVDGRSYFKFVKTLKFLKLNYDSVLPEEITSSDKRLILTTMG
                     ESSKIPSNLVIFDEEFDYDPTVIRGKMVQKLESGIHRSSLVIGIDPGNRIGLSVFYYE
                     KEIESSIYTSVDDLISHIVKLLVGLNAERKIVKVGNGNMRVARQIANSLNLHFCSHFE
                     LEFVDERKTSLRVKNYNKRGIRDKISARYITQREGYRHLVLPLSRIG"
     gene            2388..2723
                     /locus_tag="VEJ68_06105"
     CDS             2388..2723
                     /locus_tag="VEJ68_06105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06374.1"
                     /translation="MTCKGICTRYKAQKPVGTGRYASGQKRCQICEIFIKWEGLWCPC
                     CGYRLRTKPRNLKYKAKLRARVEADQLEAVAGKSMEVEEIEPVAVKSTRKAKTTKAAK
                     KVAIEPVAV"
     gene            2737..3075
                     /locus_tag="VEJ68_06110"
     CDS             2737..3075
                     /locus_tag="VEJ68_06110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06375.1"
                     /translation="MISQVGYKKKTVTVNQREFLVQIVPFDNGDFISITEGKEKIGTI
                     VVSISSAGRTSTATVIPSKSDTTFLKMVSERVASTINGICVFSLNVQKELELDIMKVL
                     MNDIMEIIRQ"
     gene            3072..4406
                     /locus_tag="VEJ68_06115"
     CDS             3072..4406
                     /locus_tag="VEJ68_06115"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016940011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HXX06376.1"
                     /translation="MNLDLRSYLGQIDKITELAIVKKKISAKYEIAAITAKMDGSKAI
                     MFENVKDSKFRVVSNLVGTKRRFAQAIGTTENKIHDKVIRAINNASKPRIISKGKFME
                     NHSRNLYDLPIITHFEKEPGPFITSSIVYTKNQETDTQNSSFHRLLRLDANHFSIRMV
                     EGRHLHRSYMYAKERGEDLRVAITVGVHPAVSIAGAYQAEWGKDELEIANQLMDRKLE
                     LAMCPYSGMFVPSGTEIVMEGRILRDKTHKEWMVEMLRTYDFKRMQPVFELDRLYYRN
                     NPIFHDVLSGYAEHRLLMGMPIEAKLNKNLRQIMPQTKKVILTEGGCKWLHAVVQISK
                     KKESDPKKIIKAAFAAHRSLKHVTVVDDDIDPSDQTAVEYAIATRFQADKDLVMLTKV
                     RGSSLDPSSDQKNLLTTKMGLDATKSFSKRPEGFEIAKIPKADKISLKNYVK"
     gene            complement(4418..5323)
                     /locus_tag="VEJ68_06120"
     CDS             complement(4418..5323)
                     /locus_tag="VEJ68_06120"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013483220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0048034 - heme O biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HXX06377.1"
                     /translation="MLTTKASSRIKTYYEVTKPKIWYLLVFTAIGAAFTASNIYHIPI
                     SPLTWTLVVGGVIAGSAAANTLTNYNDRDIDAIMERTKDRPIPSRRIYPAKKALHFGL
                     ILAAISLICAFAINTWAGIFMAFGLADNILVYSKLLKRRSRTNIVLGGFSGGAPAMIG
                     YVAVTATGLWDLGLVMAGLVFVWIPMHIWSLTLHVKEDYNKVKVPMLTAVESEKTSVR
                     VIAGTTLMMVLFSIFPFFMTDSVGKHLFHYVYLYTAIASGAIMVALSIWLLVKPSERA
                     SWTLFKFSSPYLAILFIALMVDSTL"
     gene            complement(5378..5836)
                     /locus_tag="VEJ68_06125"
     CDS             complement(5378..5836)
                     /locus_tag="VEJ68_06125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013483221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HXX06378.1"
                     /translation="MAKVDDLDMIILSELSQDANISVPRISKKINVNSSVVYSRIKRL
                     IKRKLIERFTIVVNDRELGYTVKALTGINMDSKMRDHVIEELMKIAEVREISEVTGRF
                     DIIVTMYAKNLDEMHRLISEKVGRIQGVQRSESFIEMKRTTKPMPYKPAK"
BASE COUNT         2044 a         1043 c         1113 g         1808 t
ORIGIN      
        1 ctaaagctag caaagcatca ttttgcattg atttcgcaat tatcaacatt cgttttaatg
       61 ccccatctac tgaaagttca aagaggttga tgagcacttg gatggtgatt ccttctgtgg
      121 aatctgcaat aatttcagtt cccatcagaa tgccttttac tgcttctttg actgcatttc
      181 tctgagatgg ttttaatctt ccgagttttg gttttacgtt aattatattg aacccaagca
      241 agtaaaggga gattaacttc cttactatta cagcatcttc atcgtcttgt tttatttcga
      301 tagttgcatc ttctgtgttt agaggtttgt tatgatgctt tagaggtaca atctgtaaag
      361 tagaaattcc ttgtcgcata acagcaacct gatcaccctg ttttaatccc atgtcggcaa
      421 cccattgttt aggtaacgaa acaatatacg atgactttcc tgtaaactgt atttttctca
      481 tctcttcgat atttgccata tttgcatatg gtatggttta ttctatatag ttcttcggat
      541 ctactatata gtattcccac aactgcaaaa ataattaggg aggtagtaag aagataaatt
      601 aaaaatggat tcggtattaa agatcaaaca tacattggat gcactatttg gtattggcat
      661 atcaaaatgt cttccaaaag atatacaatt tacttattca aaaagaactg gtcgaataca
      721 acatgtatat caaaacgaat ctcttctctg cactcttcga actgatggcg gattagcaat
      781 aacgccttat tttgctcaaa tattgatgaa aagcaagaaa tttcgagaaa attgtgtcga
      841 aatagatgat gactctaaac catttattga gaacggtaat tccgtatttt ctaaacatgt
      901 aacttggtgt ggaaaaaata ttctaattgg atctgatgtt cctgtacttt acagaaataa
      961 tgtgattgca gtaggaaaag ccatactttc gtcaaaaatg atcaaatctc ttaaaaaagg
     1021 ggctgcggta aagatcagag atagtttaaa aagtcttgtt aagggagaat gagtagaaaa
     1081 tgatgcgtgg cggaaaccgt gaaatgcgta ggatgttgga cagaatgggt cttgaaatga
     1141 aggaagtaaa taatgtacaa gaggtcatta tcaagacaga tacaaaggag atcataataa
     1201 caaaaccagc agtcaccgaa atgaaggcta aagataactc tatttttcaa gtcattgctg
     1261 acagctatga agagagggag ctggaggtac acatatttag tcaagacgac attacgttag
     1321 ttgctcaaca agcaaatgta tccaccgagg aagcaaccaa agccctaact gaagcaaaag
     1381 gtgaccttgc tagagccata ttgctattga caactaaatg agcatggttg atcaataatc
     1441 aaatacaaat aaactttaaa ttttcaaaga aggaagatta ggtatagcat accaaactca
     1501 aaacaacatt gcggtggcta cagtagatgg tagatcctat tttaaatttg taaaaacact
     1561 caaatttttg aaactaaact atgattctgt tttacctgaa gaaatcacaa gttctgataa
     1621 acgactaatt ctgactacca tgggcgagtc atctaaaatt cccagtaacc ttgttatttt
     1681 tgatgaggaa tttgactatg atcctactgt cataaggggg aagatggtac aaaaacttga
     1741 atcaggaatt catagaagct cattggtaat tggaattgat cctggtaata ggattgggct
     1801 ttctgtattc tactacgaaa aagagattga gagctcaatc tatacctcag ttgatgattt
     1861 gatatcgcat attgtaaaat tgcttgttgg gttgaatgca gaaagaaaaa ttgtcaaagt
     1921 tggcaatgga aatatgagag tagcacgaca gattgcaaac tctcttaatc ttcatttctg
     1981 ttcacacttt gagcttgaat ttgttgatga acgcaagaca tcattaagag taaagaacta
     2041 taacaaaaga ggaatacgtg ataaaatatc tgcaaggtat atcactcagc gggaaggtta
     2101 tcgacattta gtattgccac tttctagaat cggttaaaaa tcaaaaaatt gtagttaatc
     2161 cttaaatatt agattgaaaa aattcttaaa aacataaaaa tttttgttct gaaaaaaaca
     2221 tacatattta tatctctttt tcaggttttt tctgaaaact gttgatactg tcttgcaagt
     2281 tgaatatagt ttttacaaaa tatcaaagaa atgattagag aaatttctga tccatgctta
     2341 aatatatact aatactatat actattacaa ggtaaagtga tctaaaattg acatgcaaag
     2401 gaatatgcac aagatacaag gcacagaagc cagtaggtac gggccgttat gcatctggac
     2461 aaaaaagatg tcaaatttgt gagatcttca taaaatggga aggtctttgg tgtccatgtt
     2521 gcggatacag actccgaact aaacctagaa acctcaaata caaggcaaaa ctgcgggcaa
     2581 gagtcgaagc tgatcaacta gaagctgttg ctggaaagtc tatggaagta gaagagatag
     2641 aaccagttgc agtaaaatct acaagaaagg caaagacaac aaaggctgca aaaaaggtag
     2701 caatagaacc tgtagcagta taggcgtagt aagctgttga tatcacaagt cggctacaag
     2761 aaaaaaaccg taactgtgaa tcagcgagaa ttcttggttc aaatagttcc cttcgataat
     2821 ggagatttta tttctataac agaaggaaag gaaaagatag gaactattgt tgtttcgata
     2881 agttctgccg gtcgtacaag cactgcaaca gtaataccgt caaaatcaga cacgaccttt
     2941 ctaaagatgg tatctgaacg tgttgcttca actattaacg gcatttgtgt tttttcattg
     3001 aatgtccaaa aagaattaga actcgatatt atgaaagttc taatgaatga tataatggag
     3061 attatacgac aatgaatctc gatctacgca gttaccttgg tcagattgat aagataacgg
     3121 aactcgccat tgtaaaaaag aaaatctctg caaaatatga aattgcagcc attactgcaa
     3181 agatggatgg ctcaaaagcg atcatgtttg aaaatgtcaa agacagtaaa tttcgagttg
     3241 tatcaaatct ggtaggtaca aaaaggcgat ttgctcaagc aattggaact actgaaaata
     3301 aaattcacga taaggttatc agggcaatta acaacgcttc aaaacctcga atcataagta
     3361 aaggcaaatt tatggaaaat cattcaagaa acctatatga tctaccgata ataactcatt
     3421 ttgaaaaaga accaggaccc tttatcacat cttcaatagt atatacaaaa aaccaagaga
     3481 ctgatactca aaattcttca ttccacagac ttcttaggct tgatgctaat catttctcca
     3541 taagaatggt ggagggaaga catcttcaca gatcctatat gtatgccaag gaacgtggtg
     3601 aagatttacg ggttgccatt acagtgggag ttcatcccgc tgtgtcaatt gcaggagcat
     3661 atcaagcaga atggggaaaa gacgagttag aaattgctaa tcaacttatg gacagaaaac
     3721 tcgagttagc aatgtgtcca tattcaggaa tgtttgtacc ctcgggtaca gaaattgtta
     3781 tggaagggcg tattcttaga gataaaaccc acaaagaatg gatggttgaa atgcttcgta
     3841 catatgattt caagagaatg cagccagtgt ttgagcttga cagattgtat tatagaaaca
     3901 atccaatctt ccatgatgtt ttgtccggtt acgcagaaca ccgattattg atgggaatgc
     3961 caattgaagc taaattgaat aaaaatctta ggcaaattat gccacaaaca aagaaggtga
     4021 tacttactga aggtggctgt aaatggttac atgccgttgt acaaatttca aagaaaaaag
     4081 agtctgaccc aaaaaagata atcaaagctg catttgctgc tcatagatca ctcaaacacg
     4141 tgaccgtcgt tgatgatgat atagatccat cagaccaaac agccgtagaa tatgccatag
     4201 ctacaagatt tcaggcagac aaggacctag taatgttaac aaaggttcgc ggttcaagcc
     4261 ttgatccttc tagtgatcaa aaaaatctgc taaccactaa gatggggttg gatgcaacta
     4321 aatctttctc aaaacgcccg gaaggttttg aaattgccaa aatcccaaaa gcagacaaaa
     4381 tctctctgaa aaactatgtc aagtaaacat tcaggtctta aagcgtagaa tcaaccatta
     4441 acgcaataaa caatattgca agatatgggc ttgaaaactt gaacaatgtc caagaggccc
     4501 tttctgatgg ttttactaat aaccatatac tcaatgctac catgatagct cctgatgcta
     4561 ttgcagtgta gagataaaca taatggaaca aatgttttcc cacagaatct gtcatgaaaa
     4621 atggaaatat gctaaaaaga accatcataa gagttgttcc agcaattaca cggacagaag
     4681 ttttttcaga ttcaactgca gtcagcatag gaaccttgac tttgttataa tcttctttga
     4741 catgcaaagt aagactccat atgtgcattg gaatccaaac aaaaactaat cctgccatta
     4801 ctagtcccaa gtcccaaaga ccggttgcag ttacagcaac atatccaatc attgcaggag
     4861 ctccgccaga aaatcctcct agaactatgt ttgttctact tcggcgcttg agtaatttac
     4921 tgtaaactaa aatgttgtca gcaagaccaa atgccataaa gatcccagcc catgtattga
     4981 ttgcaaaggc gcaaattagt gaaattgctg ctagtattaa tccaaagtgc agtgcttttt
     5041 ttgcgggata aattcttctg ctgggaattg gtctatcttt tgttctttcc attatagcgt
     5101 caatgtctct atcattatag tttgtcagtg tgttagcggc agcagatcca gctatgacac
     5161 caccaaccac taaggtccaa gtaagtggag atattggtat gtgataaata ttagatgctg
     5221 taaatgcagc tcctatcgca gtaaaaacca aaagatacca tatcttcggt ttagtaactt
     5281 catagtatgt tttgattctg gaactggctt ttgttgttag cacacttctc tgccttcttt
     5341 ggaacctctt tgttatttat aggttgaaaa agtttgatta ctttgcaggc ttgtagggca
     5401 tcggttttgt agttcttttc atctctatga agctctctga gcgctgtact ccttgtattc
     5461 tgccaacctt ctcagatatc aatctgtgca tctcatccaa gtttttggca tacatcgtta
     5521 ctatgatatc aaatcttccg gtgacttcag aaatctctct tacctctgct attttcatga
     5581 gttcttcaat tacatggtct ctcatcttag agtccatgtt tattccagta agtgctttta
     5641 ctgtatagcc aagttcccta tcatttacaa ctatggtgaa ccgttcaatg agctttcttt
     5701 tgataagtct cttaattctg ctatatacta ctgatgaatt gacattgatc ttctttgata
     5761 ttcgaggaac cgaaatgttt gcatcttgtg atagctccga taaaattatc atatctaaat
     5821 catcaacttt tgccattcaa aacaccgatt attgtgaata aatggatctt aataaacttg
     5881 ttattataaa atttctataa ttcttaatct gcttagatgt aacctttttt gtacaataat
     5941 tctgccaaaa gtactgcacc ttttgcagat cccatttttt cattatgtga aaataaaaca
     6001 tacttaat
//
LOCUS       DASPUS010000254         2112 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1776257, whole genome shotgun sequence.
ACCESSION   DASPUS010000254 DASPUS010000000
VERSION     DASPUS010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1776257"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1375
                     /gene="aspS"
                     /locus_tag="VEJ68_06130"
     CDS             <1..1375
                     /gene="aspS"
                     /locus_tag="VEJ68_06130"
                     /EC_number="6.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015017794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004815 - aspartate-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006422 - aspartyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aspartate--tRNA(Asn) ligase"
                     /protein_id="HXX06379.1"
                     /translation="LSNNNSSIHKLTLSRTHLMKTMIDTELGNWRRTIYSNNLDPSLE
                     GKEVIVMGWISSVRDHGNLVFVMLNDKEGEMQITAKADVCPDEIREELVKLKEQSTIA
                     VKGTIKPSNKAPHGAEIIPTELKIFSNVEKIAPFTWQTKTVPNIDTRLEIRAIDLRRN
                     TLQHLFKLRSLVLRSIREYLYEKEFTEINTPKMIATATEGGAALFPIFYYNKEAFLAQ
                     SPQLYKEQLTLSFEKVFEIAPIFRAEPSRTNRHLSEAISIDLEEAFVDYNDIMKHIEN
                     IVIKSIKTVNDYVNTIKDLEFIVPQIPNSIPQYAYSDLVDKMKAAGAKTEWGDDLYPS
                     QLKKINLSGFYFIKDWPLAPKPFYVKAKKDNQKVSESFDLMFGDLELSSGSTRIEKRA
                     ELEERMKNKGFKLDAFDYHLRIFDYGVPPHAGCGIGLERLMMALTGTENIRDTTFYPR
                     DVDRLTP"
     gene            1385..1660
                     /locus_tag="VEJ68_06135"
     CDS             1385..1660
                     /locus_tag="VEJ68_06135"
                     /inference="COORDINATES: protein motif:HMM:NF014716.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06380.1"
                     /translation="MVDNTEIKHLADLIKVELKEPETYVKQVEQILNYFESLDKVEFA
                     SDEQLRKEISFDSLREDKNEPFSIDGKLLIEKLNKDQNNFIRAPKMI"
     gene            1661..>2112
                     /locus_tag="VEJ68_06140"
     CDS             1661..>2112
                     /locus_tag="VEJ68_06140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HXX06381.1"
                     /translation="MNLNISATEYVAQVRDGAISAEEFISKTIERIHLVENKIHAYIT
                     IDEKNALERAKTIDRKIRAKERVGACFGMPLSIKDNICTMGLKTTCASKILEDFVAPY
                     DATVISRLKSQDAIILGKVNLDEFAMGSTTEFSFYGPTKNPWNTQYVPG"
BASE COUNT          774 a          355 c          400 g          583 t
ORIGIN      
        1 attaagtaat aacaactcat cgatacataa attaacacta agcagaacac atttgatgaa
       61 aacaatgata gatacagaac ttggcaactg gcgaagaact atctattcta ataatcttga
      121 tccctctctt gagggaaaag aagtaattgt aatgggttgg atttcaagtg tacgagatca
      181 tggaaatctt gtctttgtta tgctcaatga taaagagggg gaaatgcaga ttactgccaa
      241 ggctgatgtt tgccctgatg aaattcgaga agaactggtc aaattaaaag aacaatcaac
      301 catagcagtg aagggtacca taaaaccctc aaacaaggca cctcatggag cagaaataat
      361 tccaactgaa ttaaaaatat tctcaaatgt agaaaaaatt gctccgttta cttggcagac
      421 aaaaactgtg ccaaatatcg atactagatt ggagattagg gcaatagatc ttcgcagaaa
      481 tactttgcag catctcttca aattgcgaag tcttgtactt agatccatac gagaatatct
      541 ctatgaaaaa gaattcaccg agataaatac tccaaaaatg attgcaaccg caactgaagg
      601 aggtgcagcg ttatttccaa ttttttacta taataaagaa gcatttcttg cccaaagccc
      661 acagctttac aaggaacaac tcactttgag ttttgagaaa gtttttgaga tcgccccaat
      721 ctttagagcg gagccatcaa gaactaatag acatctatca gaggcaatct caatagatct
      781 tgaagaagca tttgtcgact ataatgatat catgaagcat attgaaaaca ttgttatcaa
      841 atcgataaag actgttaatg actatgtcaa cacaataaaa gatcttgaat ttatcgtacc
      901 tcagattcca aactcaattc ctcaatatgc ttattcagat ttagttgata aaatgaaagc
      961 tgcgggggca aagacagaat ggggagatga tctttaccca tcacaactga aaaagataaa
     1021 cctctctggt ttctatttca taaaagactg gccattggct cctaaaccat tctacgttaa
     1081 agccaagaaa gataatcaaa aagtgtcgga atcttttgat ctgatgtttg gtgatttgga
     1141 actttcatct ggtagtacta gaattgagaa gagagcagaa cttgaagaaa ggatgaaaaa
     1201 caaaggattc aagttggatg cctttgatta ccatcttcgt atttttgatt atggtgtacc
     1261 acctcatgca gggtgtggta ttggtcttga aaggttgatg atggcattaa ccggcacaga
     1321 aaacattaga gatacaacat tttatccaag agacgtcgat agattaacac catagtgaaa
     1381 ccaaatggta gacaatactg aaatcaaaca cttagcagat ttgataaaag tcgagctcaa
     1441 agaaccagaa acatatgtca aacaggtaga gcagatattg aactattttg aaagcttaga
     1501 taaagtggaa tttgcttcag acgagcaact ccgaaaagaa atttcatttg acagtttgcg
     1561 agaagataaa aatgaaccat tttcaattga tggaaaactg ctcatagaga agttaaataa
     1621 agatcaaaat aattttattc gtgctccaaa gatgatttaa atgaatctta acatttctgc
     1681 aactgaatat gtcgcacagg tacgcgatgg ggcaatttca gctgaagaat ttatttcaaa
     1741 aacaattgaa agaattcact tggtcgaaaa caaaattcat gcatacatta caattgatga
     1801 gaaaaatgcc ttggaaaggg ctaaaacaat tgatagaaaa atccgtgcaa aagagagagt
     1861 tggtgcatgt tttggtatgc cattgtctat caaagataac atttgcacaa tgggtttgaa
     1921 aactacatgt gcctctaaaa tactcgaaga ttttgttgct ccatatgatg ctacggttat
     1981 ttcaagatta aagtctcaag atgccattat actaggaaaa gtgaacttgg atgaatttgc
     2041 catgggttct acaacagaat tcagttttta tggccccaca aaaaatccct ggaatactca
     2101 gtatgtccca gg
//
LOCUS       DASPUS010000255         2757 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_129799, whole genome shotgun sequence.
ACCESSION   DASPUS010000255 DASPUS010000000
VERSION     DASPUS010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2757)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129799"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="VEJ68_06145"
     CDS             complement(<1..258)
                     /locus_tag="VEJ68_06145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="7,8-didemethyl-8-hydroxy-5-deazariboflavin
                     synthase subunit CofG"
                     /protein_id="HXX06382.1"
                     /translation="MSEIILNSELLNNVTEGREISKDEACQIYQSAHNEPSEVYKAAE
                     FLRNKNKGSVVTYSRKVFFNLINLCRDTCSYCTYKAEPGQAK"
     gene            complement(297..1433)
                     /locus_tag="VEJ68_06150"
     CDS             complement(297..1433)
                     /locus_tag="VEJ68_06150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010194460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HXX06383.1"
                     /translation="MSKTTAIIGGTYGALVIILVFVFLFSPGRFDILNQAPQINSNFF
                     DQTNVKNNQLSLADLFAKSDDGVVQIIVRKSNDSSTERDIGSGIVYDNSGHIITNNHV
                     VENAQKISVVFHGGKSYIANVVGTDPYADLAVVKINANSAVLNPLPLGNSAELRIGDE
                     VAAIGNPFGLSGSMTQGIVSQLGRLLNPPNSSFSIPNVIQTDTPINPGNSGGPLLNMQ
                     GQVIGITTAIQSGTGEFSGVGFAIPSNTIKKIIPVLIDTGHYRHPWLGISGISIDPDL
                     ASTLQLPVSSGFLIETVIHNSPAYLAGLHGYSQNKTIDGTKYQVGGDIITGVDGNPIN
                     KIEDILNYLQEKKTVGDKISLQIIRDGKKMDASLTLQERPSETQ"
     gene            complement(1598..>2757)
                     /locus_tag="VEJ68_06155"
     CDS             complement(1598..>2757)
                     /locus_tag="VEJ68_06155"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010194463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HXX06384.1"
                     /translation="GVAITWILLIRSMWITFRDSPFLDKFDSKPHSKPKVSVILPARN
                     EEGFIERCLNSLIEQDYENYEIIAIDDRSEDRTGEIIKKIAEKSSKIKYVLAGPKPPK
                     WMGKNWACVEGFKEASGELLLFTDADTYHKKNIISISVSHLLSENLDALTVIPKMLCL
                     DKWTRITLPVLSTFLHTRFSALRVNDSSKKTGYFFGSFFIITRKTYEMVGTHEGVKSE
                     IVEDGALGKKVKESGFKLKMVRGEHLVEAVWARDWTTLWHALKRLMTPLYLQASSIAM
                     AIFVAVLFLLFIPFPTLVYSGVFSNVSESFSILCGVSATAAILVFLGSALDARKGLGL
                     SVKYALISPIGSAIIVGGFASGILNAKSKKAVTWRGRTYSMVDTIQNSISL"
BASE COUNT          800 a          541 c          448 g          968 t
ORIGIN      
        1 ttttgcttgt ccgggctcag ctttgtaggt gcaataagaa cacgtatctc tgcacagatt
       61 aattaaatta aaaaagactt ttcttgaata ggtaacaact gagcctttgt ttttatttct
      121 gagaaattct gctgctttgt aaacctctga tggctcattg tgtgcacttt gataaatttg
      181 gcatgcttca tctttagaaa tctctcttcc ctcagttacg ttgtttaata attccgaatt
      241 gagtatgatc tcgctcaact agtcatgtaa ctatgggagt tgtatttatg cttgtactac
      301 tgagtctcag atggtctttc ctgtaatgta agacttgcat ccattttttt accatctcga
      361 attatctgaa gtgatatttt gtctcctaca gttttctttt cttgcaagta gttgagtata
      421 tcttcaattt tattaatggg atttccatca actccagtaa ttatatctcc tcccacctga
      481 tacttggtgc catcaattgt cttattttgt gaatatccat gcaaaccggc aagataagct
      541 gggctgttgt gtattactgt ctcgattaag aaaccactcg aaacaggtaa ctgcaatgta
      601 cttgctagat ctgggtcaat actaatccca gatatgccaa gccatggatg tctgtaatgt
      661 ccagtatcta tcaaaaccgg aattattttt ttaatcgtat ttgatggtat ggcaaatcct
      721 actcctgaaa actcgccagt tcctgattgg atggcagttg taattccaat tacttggcct
      781 tgcatgttga gtagaggacc accagaattt cctggattaa ttggggtatc agtttgtatt
      841 acatttggta ttgaaaagga actgttaggg ggatttaaca gccttccaag ctggctgacg
      901 atgccttgtg tcattgatcc ggagaggcca aatggatttc caattgcagc cacctcatcc
      961 ccaatcctaa gttctgccga gtttcccaat ggtagtgggt ttaaaactgc agaattagca
     1021 tttatcttca ctactgccaa gtctgcataa ggatctgtgc caacaacatt tgcaatatat
     1081 gatttgccac catgaaaaac aacgcttatc ttctgagcat tttctactac gtggttattg
     1141 gttatgatgt gacctgaatt gtcatatact ataccagatc ctatgtctct ttcagtagaa
     1201 gaatcattag atttacgaac tattatttgg actacaccgt catctgattt tgcaaaaaga
     1261 tctgccaaac ttaattgatt gttttttaca ttagtctgat caaagaaatt tgaatttatt
     1321 tgtggtgctt gattcaatat atcaaatctt ccaggcgaaa aaagaaaaac aaatactagt
     1381 attattacca atgccccata tgttccacct ataattgcag ttgttttgct caaggaggga
     1441 ccttataatt tgtagtcata tattattttg tttcaaagat ttctgttttt ctaaactaaa
     1501 ctattaaaag tcattttttc aataaaaaaa caaataacat tatctttcat attttattat
     1561 ctttgtattt cttttatcat gatatagtgt aattcaatca taagctaatt gaattttgaa
     1621 ttgtatccac cattgaatat gtcctacctc tccacgttac agctttctta cttttagcgt
     1681 tcaaaattcc gcttgcaaat cctcctacta taatcgcgct tccaatcggt gatatcaatg
     1741 catatttaac agataggccc agcccttttc ttgcatccaa agcacttccc aaaaacacga
     1801 gtatagctgc agttgctgaa actccacaaa gaatagaaaa tgattctgat acatttgaaa
     1861 aaactcccga atagactagt gttggaaaag gtataaacag taaaaataag actgccacaa
     1921 agattgccat tgctatagaa cttgcttgta aatataatgg agtcatcaat cgcttcagag
     1981 cgtgccagag tgtagtccag tcccttgccc atactgcttc aactaggtgt tcgcctctga
     2041 ccatctttag tttaaagcct gattctttca ctttttttcc tagcgctcca tcttctacaa
     2101 tttcagattt tacaccctca tgcgtaccta ccatttcata ggtttttctt gtgataatga
     2161 agaaactccc aaagaaataa cctgtttttt ttgaagaatc atttacacga agcgcagaaa
     2221 atcttgtgtg caaaaatgtt gatagcacag gtagcgtaat tcttgtccat ttgtccaaac
     2281 aaagcatctt gggaattaca gttaacgcgt caagattttc acttaaaaga tgcgatactg
     2341 aaatagaaat tatatttttt ttgtggtatg tatccgcatc agtaaaaagt aatagttcgc
     2401 cactggcttc cttgaatcct tctacacatg cccaattctt acccatccat tttggaggct
     2461 ttggtcctgc aagaacatat ttaatttttg aacttttctc tgcaattttt tttattattt
     2521 ctcctgttct atcttctgat ctatcatcaa ttgcaatgat ctcgtaattt tcataatcct
     2581 gttcaattag agaattaaga catctttcaa taaatccttc ttcatttctt gcaggcaaga
     2641 tcacagaaac ttttggcttt gaatgaggct ttgaatcaaa tttatctagg aatggagagt
     2701 cacgaaatgt aatccacatt gatcttatta gcaaaatcca tgttattgca actccca
//
LOCUS       DASPUS010000256         5357 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_681882, whole genome shotgun sequence.
ACCESSION   DASPUS010000256 DASPUS010000000
VERSION     DASPUS010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 5357)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5357)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5357
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_681882"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1262)
                     /locus_tag="VEJ68_06160"
     CDS             complement(<1..1262)
                     /locus_tag="VEJ68_06160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HXX06385.1"
                     /translation="MEKYDTVIVGGGSAGLAALKQLANLGKQAVLLEAGSKIGSKNIS
                     GGILYSKKPKKNKTNNVEDIYENFLQDKPYERKITKYVLHATSKEKVFSIDLTAAHNY
                     EANFGCSVLMNKLNQWFAQQADESAQKYGGGIVPGVHVNSISWDSNGKTIIQTDELDE
                     IEAKSIIAADGVNSEIAFMTGARSKFTPQQLYQGVKVIIKLPQDIIDQRFGTEPETGA
                     AHLFAGDVTLNHIGGGFLYTNLETLSLGAVYHLDSLLENPAGPYELVNALLKNPMISD
                     LIKDEVPVRTEIDKNLPKEEQIRIRFALTKMIKTWYELREAYLSKNGKERLLKEGKYG
                     SVEEIQKQLSSLQDQMSNKYGVKFVTDYVEAEYSAKLVPDGKRCRMEKPYFKNILFVG
                     DSAGRGIFVGPRIEGLNVGIDDAARAANA"
     gene            complement(1272..2456)
                     /locus_tag="VEJ68_06165"
     CDS             complement(1272..2456)
                     /locus_tag="VEJ68_06165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HXX06386.1"
                     /translation="MTEGDFRHVYIIMEQEEGKLLQVSLEMLAEARRLLDEFNKKYSS
                     KEKVVAVLLGHDIKQLTESLISHGADAVVYSDNPELKHVRNTIYTKVISQIALDKDVS
                     MQIEPEYATQFKKPRYMFFAADSIGRHLSATAMAQLESGLASDINKLVIGDIQMTHQS
                     KTGGKPTTYEKTLEMYRPDFSGFLWTTILCLDNLNPAMAKDFHPQSCSIIPGVFEPLR
                     PDSTRQGKIIEFIPKFDEVDLKVKIIDRKIIKSEIDFESHKTIVSFGRGIKESPEQNI
                     KLIEGLAYELDGEIGITLPLSKRPFTINQTMDSTYLIPDRVIGTSGSKVAPKLYIAAG
                     ISGAMQHIAGMKDSEFIVAINPDEDAPMKNECDVFIKGRMEDVIPILIEEIRKQKQGT
                     QA"
     gene            complement(2453..3331)
                     /locus_tag="VEJ68_06170"
     CDS             complement(2453..3331)
                     /locus_tag="VEJ68_06170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta"
                     /protein_id="HXX06387.1"
                     /translation="MEPLNIAVIVKLEPDFSEGNVSYNPDGTLNRAETKNILGPHSAI
                     AANAAFYSKVKYGAKISVATMGPPMADSILQQAQQICDADGLYLYSDRIFAGADTLAT
                     AEVLKSGILKIQEKMDIVFSGHRASDGETGQTGPQTAWKLGMTFLGNVIDYEINVQSR
                     TIRAKRLVRIQGLYDVVEEIEAPLPVFIAIDPSYKSSFNTVSQRLAYEKYQKEALQKS
                     QNYKQFLKVFNAAEIGADPKMIGIAGSPTIVYKVERIPKGKATRQAEVIDGTNLEEIR
                     KVVAKLRQSLATMVIK"
     gene            3465..4115
                     /locus_tag="VEJ68_06175"
     CDS             3465..4115
                     /locus_tag="VEJ68_06175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06388.1"
                     /translation="MHKYQKAKCPLLIFGLGFTLLAIILSQSVVVPAFANTVQFDNSI
                     NGNHGIVFSYHVSPIVAITDSQSHDSTSKIVISDSSAVEGSNYTVTYNITNGKVLGMK
                     IDSQAKSLLVAVGTTGDGALTISLPRALIDSKAGNLDDKYYVLVNAQEADFIETNTTA
                     SIRTLSIPLVDGAEEVEIMGTQVVPEFDSIVTAILVIGIISMIAMTSKFGSRFMSR"
     gene            4133..4423
                     /locus_tag="VEJ68_06180"
     CDS             4133..4423
                     /locus_tag="VEJ68_06180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06389.1"
                     /translation="MIREKKPLPTKTIVLVALYVVLIPFSLAWYNTLISIDCNHVKPF
                     ESNNVKIDTSNNTPQNCLEQTNYHWIKFYGINGLIYGVQLVALIMTVKKKNS"
     gene            4960..>5357
                     /locus_tag="VEJ68_06185"
     CDS             4960..>5357
                     /locus_tag="VEJ68_06185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06390.1"
                     /translation="MSIGIVLAVVGALFLDNSYKSVESIMQIKHHLIDDGTILPHQSI
                     NSTISNEQLVDHNVLIVRVIPVSDSVKLITTEPNNETFEKESNDGFVYHIIGKTSQTM
                     GNYSVTIYNLENEPVSVNVIIGEDPYLSGK"
BASE COUNT         1544 a         1018 c          930 g         1865 t
ORIGIN      
        1 gcgtttgctg cccttgctgc atcatcaatt ccaacgttaa ggccttctat cctaggtcca
       61 acaaatattc cccttcctgc agaatctcct acaaacaaaa tattcttaaa gtatggtttt
      121 tccatcctac agcgtttgcc atctggcaca agtttggcac tgtattctgc ctctacataa
      181 tcagttacaa atttcactcc atatttgttt gacatttgat cttgcagtga tgacaattgt
      241 ttttggatct cttccacaga accgtatttt ccttctttga gcaatcgttc ttttccgttt
      301 ttagaaagat atgcttctcg caactcatac caagtcttta tcatctttgt aagggcaaat
      361 cgaattctaa tctgttcctc ttttggtaaa tttttgtcta tttctgtcct tactggaacc
      421 tcgtccttga tcagatcact gatcatgggg tttttcagta acgcatttac aagttcatac
      481 gggccagctg gattttcaag aagcgaatca aggtgataca ctgctccaag tgaaagagtt
      541 tcgagatttg tataaaggaa accacctcct atgtggttaa gagtaacatc tcctgcaaag
      601 agatgtgccg ctcctgtttc tggctctgta ccaaatcttt gatcaataat gtcctgaggc
      661 aattttataa ttactttgac gccttggtag agctgctgtg gtgtgaattt agaccttgca
      721 cctgtcataa aagcaatttc agaatttact ccatcagcag caattattga ttttgcttct
      781 atttcatcta attcatctgt ttggatgatt gtttttccat tactatccca cgagatggaa
      841 ttgacatgta ctcctggaac tattccccct ccatattttt gtgcactttc atctgcctgc
      901 tgggcaaacc attgatttag tttgttcata aggacagaac agccaaaatt tgcttcataa
      961 ttatgcgctg cagttagatc aattgagaaa actttctctt ttgaagttgc atgtaaaaca
     1021 tattttgtta tctttctttc atatggtttg tcttggagaa aattttcgta aatgtcttca
     1081 acattgtttg ttttgttctt ctttggtttt tttgagtaaa gtattccgcc tgagatattt
     1141 ttagacccaa tcttgctacc tgcttctaga agaacagctt gttttccaag gtttgccagt
     1201 tgtttcaatg ctgcaagtcc ggctgatccg ccgccaacta ttactgtatc atatttttcc
     1261 attctaacac cttatgcttg agtaccctgt ttctgttttc ttatttcttc aattaggatt
     1321 ggtatgacat cttccattct tcctttgata aatacatcac actcgttttt catgggtgcg
     1381 tcttcatcgg gatttattgc tactatgaac tctgaatctt tcatccctgc aatatgttgc
     1441 atcgcgccac taattcctgc tgcaatgtat aattttggag ctactttgct accgctagtt
     1501 cctattactc tgtcaggtat taggtacgta gaatccattg tttggttaat cgtaaatggt
     1561 ctttttgata ggggtaatgt tatgcctatc tctccatcaa gctcataggc aagaccttca
     1621 attagtttga tgttttgttc aggtgactcc tttatacctc tcccaaaact cactatggtt
     1681 ttgtgactct caaaatcaat ttcgctttta atgatctttc tatcaattat tttgacctta
     1741 agatccacct catcaaattt tggtataaat tctataattt ttccttgcct agtagaatct
     1801 ggccgaagtg gttcaaagac tcctggtatt atactacatg attgaggatg aaaatccttt
     1861 gccatggcag gattgagatt atcaagacag agtatagtag tccataaaaa tcctgaaaaa
     1921 tcaggtctat acatctcaag tgttttttca tatgtggtgg gctttccacc ggtcttactt
     1981 tgatgagtca tctgaatatc tcctatcaca agtttgttaa tatctgatgc aagtccagat
     2041 tctaactgtg ccatcgcagt agcagaaaga tgtcttccta tgctatctgc tgcaaagaac
     2101 atgtatctgg gcttcttgaa ttgtgttgca tactctggct caatctgcat gctcacatct
     2161 ttgtctaaag caatctgaga aattactttg gtgtatatgg tatttctaac atgttttaac
     2221 tcgggattgt cagagtaaac tactgcatct gcgccatgtg atatcaaaga ttctgtgagt
     2281 tgcttgatgt cgtgtcccag taaaacagca actacttttt ccttggatga atatttttta
     2341 ttaaattcat ctaacagtcg tcttgcttca gccaacatct caaggctaac ttggagtaat
     2401 tttccttctt cttgttccat gatgatatac acatgtctaa aatctccttc tgtcatttta
     2461 tcaccattgt ggcaagagat tgtctcaact tggctactac ttttcgtatt tcttcaagat
     2521 ttgtaccatc tatgacctca gcttgtcttg tagcttttcc ttttggtatg cgttcaactt
     2581 tgtatacaat tgtcggagat cctgcaatac caatcatctt tggatctgca cctatttcgg
     2641 cagcattaaa aactttgaga aactgcttgt aattttgtga tttttgaaga gcttcttttt
     2701 gatacttttc ataagcaagt ctttgtgaaa ctgtattaaa tgaagacttg taagaaggat
     2761 caatagctat gaaaacggga agtggtgctt ctatttcttc tacaacatca tacagtccct
     2821 gaattcttac aagacgcttt gcccttattg ttctgctttg gacgttgatt tcataatcaa
     2881 taacatttcc aagaaatgtc attccaagtt tccaagccgt ctgtggccct gtttgtcccg
     2941 tttctccatc tgaagctctg tgcccggaaa atacgatgtc cattttttct tgtatcttta
     3001 gtattccaga tttgagtacc tctgctgttg ctagcgtgtc agctcctgca aaaattctat
     3061 cactataaag ataaagacca tcagcatcgc aaatctgctg ggcctgttga agaatggaat
     3121 ctgccattgg tgggcccatg gttgcaaccg aaattttggc accatatttt acttttgaat
     3181 aaaaggctgc gtttgctgct atggcgctat gtggaccaag tatatttttt gtttcagcac
     3241 gattaagtgt gccatctgga ttgtaactta cattcccttc agaaaaatca ggttctaact
     3301 ttacaattac ggctatgttg agtggctcca ttcaaaatta atctgtaagt acgtatatta
     3361 tctattttga ttattatcat ggattccaac tataatatgg gatcaaaaat gatcgtggtt
     3421 attagaaatg ttcaaaaaaa tttgactgat agttagaggt taaaatgcat aaatatcaga
     3481 aagcaaaatg ccctctgttg atttttggtc ttggatttac attgcttgcg attatactaa
     3541 gccaatctgt cgtggtacct gcttttgcaa acacggtaca gtttgataat tcaattaatg
     3601 gtaatcatgg tattgtcttt agttaccatg tttcgccaat tgttgcaata actgatagtc
     3661 aatctcatga tagtaccagt aagattgtga tatcggattc atctgctgta gaaggttcca
     3721 actataccgt tacatataat ataacaaatg gaaaggttct tggtatgaaa attgattcgc
     3781 aagcaaaatc actcttggtg gcagtaggaa ctactggtga tggagcgttg acaatatctc
     3841 ttcctagggc attaattgat tcaaaagctg gcaatttaga cgataaatac tatgtactgg
     3901 ttaatgcaca ggaagcagat tttattgaaa ctaacactac tgcatccatt agaactcttt
     3961 caattccact tgtggatggt gccgaagaag ttgaaattat gggaacacaa gtagtcccag
     4021 aatttgactc gatcgtaact gcgattcttg taattggaat aatatccatg attgctatga
     4081 cctcaaagtt tgggtcaaga tttatgtcac gataaaatga tgagaaagta acatgattag
     4141 agaaaaaaaa cctcttccaa caaaaacaat cgtactagtc gcactttatg ttgtgcttat
     4201 tccattttct cttgcctggt ataatacatt gatatcaatt gattgtaacc atgttaaacc
     4261 atttgaatca aataatgtca aaatagatac ttcaaataac acaccacaaa attgcttgga
     4321 acagactaat tatcattgga taaaattcta tggtatcaat ggattgattt atggcgtaca
     4381 gctggttgct ttgataatga ctgtgaagaa aaaaaattct tgaattattg gataattctg
     4441 caagcagttg caatcatgcc aattaagttt attttcgagt aattcgtaag aaagatacgg
     4501 attctgaatc aattaataac gacaatacaa gaatagttcc agcaccatta ttgaagatac
     4561 tttcagaaga aagcgcaata cgcattctga aatcagcttc atcatctcac aaaagcgcat
     4621 atgatctaag cagagattgc cacgtttcat taactacagt ttatagacaa ataaagaggc
     4681 tcagcgacat gaaactacta tcaatttctg gctctataga tgtaagcgga aaaaaacaat
     4741 tcatgtacaa aagcaaagac aatgtttatt gcaagtgtgc ttgttctcac atagatttgt
     4801 ctcaacttat aaaaaatcct aaaacagcaa gttagtaatt tataaaaaat tgttcgtcaa
     4861 atctgaattg tacttaatac agtcatattg aatatagttt cttattaggt acgccaaaac
     4921 acaaaaagca gtttgtttcc aaaacgtggg tttcttatca tgtctatcgg tatagttctt
     4981 gcagtggttg gtgcgctttt tttggataat tcctataaat cagtggaatc gatcatgcaa
     5041 ataaaacatc acctaattga tgatggcact attttgcctc accaatcaat aaattctaca
     5101 atttcaaacg aacagctagt tgatcataac gtgcttattg tgcgcgtaat accagtatct
     5161 gattctgtaa aattaataac aactgagcca aacaatgaaa cttttgaaaa agaaagtaat
     5221 gatggttttg tttaccacat tataggaaag acctcgcaaa caatgggtaa ttattccgtt
     5281 acaatttata accttgaaaa tgagcctgtt agcgttaatg tcataattgg cgaagatcca
     5341 tatcttagcg gaaaatg
//
LOCUS       DASPUS010000257         4902 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1502363, whole genome shotgun sequence.
ACCESSION   DASPUS010000257 DASPUS010000000
VERSION     DASPUS010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4902)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4902)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4902
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1502363"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..429)
                     /locus_tag="VEJ68_06190"
     CDS             complement(<1..429)
                     /locus_tag="VEJ68_06190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06391.1"
                     /translation="MRTRRGISTIITTAILLTATVLMGTGLVNWSNSDFKTYKNSMAS
                     TSTSDTNQINEDLAIEYVWFGTTPSKFVNITMTNTGGIGLNVTDIKIINSAQQISDYK
                     YTHSSILSHKQNSTKIFYNWQGGSPIQVVVTTSLGSIFQTQ"
     gene            578..784
                     /locus_tag="VEJ68_06195"
     CDS             578..784
                     /locus_tag="VEJ68_06195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06392.1"
                     /translation="MALTNREKILILISQAISSYSAKLQEGNIPEHQSVIDFISKNMP
                     KEYKSELSMELIDDVFSFVSDNHM"
     gene            822..1847
                     /locus_tag="VEJ68_06200"
     CDS             822..1847
                     /locus_tag="VEJ68_06200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--phosphoribosylaminoimidazolecarboxamide
                     ligase"
                     /protein_id="HXX06393.1"
                     /translation="MTTITTLGSHCALQVLKGAKDEGLKTLLVCEKKRERLYRRFGFI
                     DELFLVDSFNEITDQRCISKLKNDNAIIIPHGTLISQMSSSEIESISVPIFGNKWILR
                     WESDRNMKEKLMLESKLNVPRSLSSSKEINGLAIAKRHGAAGGKGYFLTTGEKDYKKK
                     RDKLIAKGIIKGDGDLYLQEYAFGVSAYLQYFYSPVKNEIEFFGVDRRYESDIDGLGR
                     IPAQQQIEIDGIPSFNVIGNSPLVLRESLLDEVYSMGERFVDAANRLVAPGMTGPFCL
                     EGVYDENGRFTTFEFSARIVAGTNLYVDGSPYSDLLYNEPMSMGRRIAREIKNAANEN
                     QLSKVVT"
     gene            complement(1873..2718)
                     /locus_tag="VEJ68_06205"
     CDS             complement(1873..2718)
                     /locus_tag="VEJ68_06205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018033480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06394.1"
                     /translation="MDYWQLILLGAIAGFTIFLGLPIATLQHVSPKKKGFLNALALGI
                     LIFLIIDVFSHAYDSASTAATNAFSGKGSSGDAVIDIVTMFGGIAIGLLGLVFYETKI
                     MTKNFPQILSLENIKRGDEHLRQLFHETNAYKLAMMIAVGIGAHNFSEGLAIGQSYVA
                     GEIGLAILLIIGFGAHNTTEGFGIGGPLTGLLNKPKAKFLLQAGLVGGGPTFIGTILG
                     SLWDSTVAYILFLSIAGGALIYVSMLMYNTGRKQTTNDILMIGIFVGLCAGFITDLIV
                     TLGGA"
     gene            2827..3162
                     /locus_tag="VEJ68_06210"
     CDS             2827..3162
                     /locus_tag="VEJ68_06210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HXX06395.1"
                     /translation="MKKIPFSQLKKYDINQKILEALADAQSRTILFSLVKKGKTAMEL
                     SEKYRIPLSSVYKKISDLENIALIRVEKWSLSESGKKFKVYRSRINNAEIIIKKPEPA
                     IKLTPNVEV"
     gene            complement(3163..3801)
                     /locus_tag="VEJ68_06215"
     CDS             complement(3163..3801)
                     /locus_tag="VEJ68_06215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4443 domain-containing protein"
                     /protein_id="HXX06396.1"
                     /translation="MHQVIHLLEKVTERYAPSRLLTFELAHVFKTMQLLEDKKKVSRS
                     LLMRELGLGEGSVKTLVKHMKMSRLVENSNAGMWFTDKGKAVFSKLRLAIPKEMDIPK
                     CSIALGRFNHAVLVKDLAHNVKSGIEQRDSAIKSGAVGATTMIFKNERLVMPNTREDV
                     LRSEPKIHSLIIQQFEPEENDVIIIGSSEDRKTAEMAAKSAALHTISDHEKH"
     gene            3919..4725
                     /locus_tag="VEJ68_06220"
     CDS             3919..4725
                     /locus_tag="VEJ68_06220"
                     /inference="COORDINATES: protein motif:HMM:NF015763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06397.1"
                     /translation="MLEFLPLIAVSIPTMIVLGLRHGLDVDHISAIDSLIRLHNASKY
                     SRWIGTGFSAGHMLAILAEMVFVIYTVGSFLRTDSFSLMSGFLGAGALAAIGVVNIYS
                     MKKWGRTGPAILATKVQGKTSILGPYGSALVTGLVFGLGFDTATQISAISVSAVTSAT
                     AGMQIGFILTGFFGLGMISMDTVNSIVLRSAFWRIFDTKGFRYMSYGLSGIAVSVALS
                     GGISTITQLEIIPEWTGPVLAIAVISSSFAYAYFIKKKRVSTKEKISTLE"
BASE COUNT         1617 a          889 c          877 g         1519 t
ORIGIN      
        1 ttgggtttga aatattgaac ccagcgatgt tgtaactact acttgtattg gtgatcctcc
       61 ttgccagtta tagaagatct ttgtagaatt ctgtttatga gatagtatgg aactgtgagt
      121 atatttgtaa tcagatatct gttgtgcaga atttattatc ttaatatcag ttacatttag
      181 accgattcct ccggtgtttg tcatcgtgat gtttacaaac tttgatggag tagtaccaaa
      241 ccaaacatac tcaattgcta gatcttcatt gatctggttt gtatcactag tcgaagtact
      301 cgccattgaa ttcttatatg ttttaaaatc agaattagac cagtttacca gccctgttcc
      361 catcaacact gttgcggtaa gcaatattgc agtagttatt atagtactga tacctcttct
      421 tgttctcatc ttgcatctca taaaaatgag ataatcggaa tgggtattgt atagttgtat
      481 gtaacttagg atattgacat gtttcccaca aatgggaata actggattaa tgacgtttta
      541 cacaaaagct caaattaaaa cctgctatga acatatcatg gcattgacaa atagggaaaa
      601 aattctgatc ctcatttcac aggcaatatc atcatattct gcaaaattgc aagaaggtaa
      661 tatcccagaa catcaatcag tgatagattt tatttccaag aatatgccaa aagaatacaa
      721 atcagaactg tcaatggaac ttatagatga tgttttttca tttgtttcag ataatcacat
      781 gtaactttca taaatacccg atattgtaga aaccatgtaa aatgacaacc ataacaactc
      841 ttggatccca ttgtgcatta caggtgttaa agggtgcaaa agatgaggga ttaaaaacgc
      901 ttttagtttg tgagaaaaaa cgtgagagac tttatcgtcg atttggattc attgatgaat
      961 tattcctagt tgattcattt aatgaaataa ctgatcaacg gtgcatctca aaattaaaga
     1021 atgataatgc cataatcata ccacatggaa cactaatttc acaaatgtct tcttcagaaa
     1081 tagaatccat aagcgttcca atttttggaa acaaatggat tctcagatgg gaatctgata
     1141 gaaacatgaa agagaaactc atgctagaat caaaattaaa tgttccaaga tctttatcaa
     1201 gttcaaaaga aatcaatggt cttgcaatag ctaaaagaca cggagctgcg ggcggaaaag
     1261 gatatttttt gaccacaggt gaaaaagatt acaaaaaaaa gcgtgacaag ttgattgcaa
     1321 aaggaatcat caaaggagat ggagatctgt atttacaaga atatgctttt ggagtatcgg
     1381 catatcttca atatttttat tcacctgtaa aaaatgaaat cgaatttttt ggggttgata
     1441 gaagatatga atcagatatt gacggattgg gacgcatacc agcacaacaa caaattgaga
     1501 tagacggcat accttctttc aacgttatag gtaatagtcc gttagtgcta agagaatctc
     1561 ttttagatga agtctattct atgggagaaa gatttgttga tgcagcaaat agacttgtgg
     1621 caccaggcat gacaggtcct ttctgtttgg aaggagtgta tgatgagaat gggagattta
     1681 ccacttttga gttttcagca agaatagtag ctggaacgaa tctttatgtc gatggatcac
     1741 cttattctga tcttttatac aatgagccca tgagcatggg aagaaggata gcacgtgaaa
     1801 tcaaaaatgc cgcaaatgag aatcagttat caaaagtggt aacctaatcg tctgttttaa
     1861 tacgatttaa tttcaggcgc caccaagtgt gactattagg tcagtaatga aaccagcaca
     1921 aagtcccaca aaaatgccaa tcatgagaat atcatttgtt gtttgctttc ttccggtgtt
     1981 atacattaac atagagacat aaatcagtgc gccaccagca attgataaga ataaaatgta
     2041 tgccacagta gagtcccata ggcttccaag tattgtacca atgaaggtag gtcccccacc
     2101 aaccaaacca gcttgtaaca agaattttgc cttaggttta tttaaaagcc cagtcaaagg
     2161 ccctccaatt ccaaagcctt cggttgtatt atgagctcca aacccaatta tcaaaagtat
     2221 tgcaagccct atctctcctg ccacataaga ctgacctatt gctagtccct cactgaagtt
     2281 atgagcacca attcctacag ctatcatcat tgcaagcttg taggcatttg tttcatgaaa
     2341 tagctgcctt agatgttcat ctcctcgctt tatgttttca agtgaaagta tttgtggaaa
     2401 gttttttgtc ataatcttgg tttcgtaaaa caccagtccc aaaagaccga ttgcgattcc
     2461 tccgaacata gtaacaatat caattactgc atcaccactc gaaccttttc ctgaaaaggc
     2521 atttgttgca gcagtcgaag ctgaatcgta tgcatgacta aatacatcaa ttattaaaaa
     2581 gatcagaatt ccaagtgcaa gtgcgttaag aaatcccttc ttttttggac ttacatgttg
     2641 taatgtagca attggaagac cgagaaaaat ggtaaatccc gcaatagcac ccaaaagtat
     2701 aagctgccaa taatccatgt caacaattag gataagctaa ctttatttaa acgacagact
     2761 tgttctagat ttttagaaca tcttgcatct gatttaaata gttaggcatc actaattcaa
     2821 aaaccattga aaaaaattcc gttctctcag ctgaaaaaat acgacataaa tcaaaaaatt
     2881 cttgaagccc ttgcagatgc acaatcaagg acgatactgt tttctctcgt caaaaagggc
     2941 aagactgcaa tggaattatc agaaaaatac agaatacctt tgagctcagt gtacaagaaa
     3001 atttcagatc tagaaaacat cgctcttatc agagtagaga aatggtcact gtcagagagt
     3061 gggaagaaat tcaaagtgta caggagtcga attaataatg cagaaattat aataaaaaaa
     3121 ccggaacctg caatcaaatt aactcccaat gttgaggttt aactagtgtt tttcatgatc
     3181 tgatattgta tgtaaagcgg cactttttgc tgccatctct gctgttttcc tgtcttctga
     3241 gcttccaatg ataataacat cattctcttc tggttcaaat tgttgaataa tcagagaatg
     3301 aatttttggt tcacttctca acacatcctc gcgtgtattt ggcattacaa gcctttcatt
     3361 tttaaatatc atagtagttg ccccaacagc tcctgatttg attgctgaat cacgttgttc
     3421 tatcccactc tttacattat gagccaagtc ctttactagt actgcgtgat taaatctacc
     3481 caaagcaatt gaacatttag gaatgtccat ttcttttggt attgcaagcc gtaactttga
     3541 aaatactgct ttacctttat ctgtaaacca catacccgca ttagagtttt ctactaatct
     3601 agacatcttc atatgtttta caagtgtttt tactgatcct tcgccaaggc caagttctcg
     3661 catcaataaa gaccgactca ctttcttttt atcttccaat aattgcattg ttttgaatac
     3721 atgagctaat tcaaatgtca acaatctgct tggagcatat ctttctgtta ctttttcaag
     3781 caaatgtatt acttgatgca ttttctatca actttattct atcataatta catttaaatc
     3841 aattcgaaat tatttcatgt tggataaact gtccaacact ttaaataaat taacacatta
     3901 gaaatcgaag gtaatagcat gctagagttt ttgccattga tcgcagtttc cataccaact
     3961 atgattgtac tggggctccg tcacggtttg gatgtagacc acatatccgc aatagatagt
     4021 ctgattcgtc tacataatgc ctcgaagtat tcaaggtgga taggaactgg atttagcgca
     4081 ggtcatatgc tagcaatttt agccgagatg gtttttgtga tttacacagt tggcagtttc
     4141 cttagaacag atagctttag cttaatgagt ggttttctag gagcaggagc actagccgct
     4201 attggagtgg taaacatcta ctcaatgaaa aaatggggaa gaacaggacc tgcaatatta
     4261 gcaacaaagg tacaaggcaa aacaagtata ctaggccctt acggttctgc actagtaact
     4321 ggtttagtct ttggcttggg gtttgatact gcaactcaaa tttctgccat ttcagtttca
     4381 gctgtaacgt cagctactgc aggaatgcag ataggtttca tcctaacagg attttttgga
     4441 ttgggaatga tttctatgga tacagtgaat agcatagtcc tccgttctgc tttctggaga
     4501 atatttgaca ctaaaggttt cagatacatg tcatatggct tgagtggaat agctgtcagt
     4561 gtggctctct ctggtggaat tagtactata acgcaactag aaattatccc agaatggaca
     4621 ggtcccgtgt tggcaatagc tgtaatctca tcatcatttg catatgcata tttcattaag
     4681 aagaaaagag tttcgacaaa ggaaaaaata tcaaccttgg aataaacatc taaaatttaa
     4741 tctcataaca agaaatcatt aattacagtt aacccaaaaa attaattata aattttttat
     4801 tcgagaaacc accaaaacct atcgaagacc aggtttgaca aatcttaata ttcgaataaa
     4861 aaccagcaaa aacgtgaaaa gatactatta cttggcaata cc
//
LOCUS       DASPUS010000258         2143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1635408, whole genome shotgun sequence.
ACCESSION   DASPUS010000258 DASPUS010000000
VERSION     DASPUS010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1635408"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..369
                     /gene="hisH"
                     /locus_tag="VEJ68_06225"
     CDS             <1..369
                     /gene="hisH"
                     /locus_tag="VEJ68_06225"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HXX06398.1"
                     /translation="LGMEMFFEKSEEGKLSGLGILDGEVILLPNKFKIPHMGWNDLQI
                     KKPSLLLDGVKNGSWVYFVHSYRAKPKNNEIVKADSDYGISVPAVIENGTLYGTQFHP
                     EKSGKVGAIMIKNFLRACKK"
     gene            366..1073
                     /gene="hisA"
                     /locus_tag="VEJ68_06230"
     CDS             366..1073
                     /gene="hisA"
                     /locus_tag="VEJ68_06230"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007551404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HXX06399.1"
                     /translation="MKVIPAIDIMENNVVRLVKGDPKNKTIYSDNPVESAKKWEKAGA
                     DMLHVVDLDAALGRGSNLSMIKKIAKEVSIPIQVAGGLRTEDTINEVLHFASKAVLGT
                     IAFKNKQVLKNISENTGKDRIIISVDQSQGKIVISGWQENTGVELISGIENFVKLGYS
                     EFLLTSVDRDGTLEGPDLNSLKNACQVHNTRIIASGGISNLQDTINVKKCGASAVILG
                     KALYDGKITIEEVKDVV"
     gene            1070..1870
                     /gene="hisF"
                     /locus_tag="VEJ68_06235"
     CDS             1070..1870
                     /gene="hisF"
                     /locus_tag="VEJ68_06235"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014964333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HXX06400.1"
                     /translation="MTLTKRVIPCLDVDKGRVVKGMHFKSVQDAGDPVLLAEKYSNEG
                     ADELVFLDITASEERRETIKSLVQKVAQVIDIPFTVGGGVKTLQDARDILLSGADKVA
                     INTGAVKNPEIITKLMEIFGKQCIVVAMDVKRNYNKEGKHIFSSDSKQFWFEVYIYGG
                     KTPTGLDAIDWAKDVEKRGAGEILLTSIDMDGTKEGYDVQLTEEIVNAVNIPVIASGG
                     CGKPKHMLDVFLQTKVDAALAASIFHYKTHSVDRVKEYLKENGVPVRI"
     gene            1883..>2143
                     /locus_tag="VEJ68_06240"
     CDS             1883..>2143
                     /locus_tag="VEJ68_06240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007403044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HXX06401.1"
                     /translation="MKKTIIDIDFAKGDGLIPVIVQDINSKEVLTLAYTNKESLELTQ
                     KTGNSWFWSRSRNKLWMKGEESGNTQKVKEILVDCDSDAIIYL"
BASE COUNT          766 a          326 c          478 g          573 t
ORIGIN      
        1 ttaggaatgg aaatgttttt tgaaaaaagc gaagaaggaa aattgagtgg attgggaata
       61 ttagatggtg aagtaattct acttccaaac aaattcaaga ttccacatat gggttggaat
      121 gacctacaga ttaaaaagcc aagtctactc cttgatggag tgaagaacgg ttcatgggta
      181 tactttgttc attcatacag agctaaaccc aaaaataatg aaattgtaaa ggcagactct
      241 gactatggaa taagtgtacc tgcagtgatt gaaaatggaa ctctatatgg tactcagttt
      301 catcccgaaa aatcgggcaa ggttggagcg ataatgatta agaacttttt gcgggcgtgc
      361 aaaaagtgaa agttattcct gcaattgaca ttatggagaa taatgttgtg cgtctagtga
      421 aaggtgatcc caaaaataaa acaatttaca gtgataaccc cgtagaatca gcaaaaaaat
      481 gggaaaaagc cggggcagat atgttacatg tggtagatct tgatgctgct ctcggacgag
      541 gttctaatct gtccatgatt aaaaaaattg caaaagaggt ttccatacca attcaggttg
      601 ccggaggatt acgcacagaa gacacaatta acgaagtgct tcattttgca tcaaaggcag
      661 tacttgggac aattgcattt aaaaacaaac aagtcttgaa aaatatctca gaaaatactg
      721 gaaaggacag aataataata tctgttgatc aatcacaagg aaaaatagtc ataagtggtt
      781 ggcaggaaaa caccggagtc gaattaattt caggtatcga gaactttgta aaacttgggt
      841 attctgaatt cttattgact agtgttgacc gtgatggtac tctggagggc cctgacttga
      901 attcgcttaa gaatgcatgt caagtacata atacaagaat catagcaagt ggaggaatat
      961 cgaaccttca agatacaatc aatgtaaaaa aatgtggtgc atctgctgta attctcggta
     1021 aggcattata cgatggaaaa atcacaattg aggaggttaa agatgtagta tgactctgac
     1081 caaaagagta attccttgct tagatgtcga taagggaaga gttgtcaaag gaatgcattt
     1141 caaatcagta caggatgcgg gggatccggt tctattagca gaaaaataca gcaatgaggg
     1201 agcagatgaa ctggtttttc ttgatattac tgcatcagag gaacgaagag aaactatcaa
     1261 aagccttgtc caaaaagttg ctcaagttat cgatattcca tttacggtgg gcggtggagt
     1321 aaaaactctt caggacgcaa gagacatttt gttgagcggt gctgataaag tggctattaa
     1381 cacgggggcg gtaaaaaatc cagagataat aaccaaattg atggaaattt ttggtaaaca
     1441 atgcattgtt gttgcaatgg atgttaaacg aaattacaat aaagaaggaa agcacatttt
     1501 ttcttcagat tccaagcaat tttggtttga agtctacatt tatggcggaa aaacccctac
     1561 aggtcttgat gcgattgatt gggccaagga tgttgagaaa cgaggagcgg gagaaatact
     1621 cttgactagc atagatatgg atggcacaaa agaaggatat gacgttcaac tcactgagga
     1681 gattgtaaat gcggtcaaca tacctgtaat tgcctctggt ggctgtggca aaccaaaaca
     1741 tatgttggat gtatttctac aaacaaaggt tgatgctgcc cttgcggcat ccatatttca
     1801 ctacaagaca cattccgtag atagagtaaa agaatacctt aaagaaaacg gtgttcctgt
     1861 taggatatag aagacaaaga aaatgaaaaa aacaattatt gatatagatt ttgccaaagg
     1921 cgacggatta atccctgtta ttgtccaaga tattaattca aaagaagttc ttactcttgc
     1981 ctatacaaac aaagaatctc ttgaacttac tcagaaaact ggaaactcat ggttttggag
     2041 tagatctaga aataaactat ggatgaaagg tgaagaatca ggtaatactc aaaaagtcaa
     2101 ggaaatactt gttgattgtg attctgacgc aataatatat cta
//
LOCUS       DASPUS010000259         2036 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_546169, whole genome shotgun sequence.
ACCESSION   DASPUS010000259 DASPUS010000000
VERSION     DASPUS010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2036)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2036
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_546169"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..698
                     /locus_tag="VEJ68_06245"
     CDS             <1..698
                     /locus_tag="VEJ68_06245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017743952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2252 family protein"
                     /protein_id="HXX06402.1"
                     /translation="HPKIKDEPPLIYHRKNMDVAKSMKFLNDYKASLQDERRQLLDRY
                     YLVDSAIKVVGIGSVGTRCIISLFFAEGEEPLFLQTKEARRSVLEDPTGKSRYDLQGH
                     RVVHGQRLMQSASDIFLGWQRSDSGHDYYIRQFHDMKIAAAVETFKTRTLIDYAIMCG
                     WTLARAHSKAGDASMIAGYLGSKEKFDDALVQYATSYADQVERDFKAFKAAIQSGRLR
                     TKPKKGDSLEFEI"
     gene            751..1356
                     /locus_tag="VEJ68_06250"
     CDS             751..1356
                     /locus_tag="VEJ68_06250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06403.1"
                     /translation="MFNNDNKDPVKPEKILSQKKINSILYSDPFVKAGFISKLVKDTN
                     INVLYLDLDLLYSGYITSEIIPSQKNLTLFQPTSDTIVEMLTEILAKSSISQSLIIVD
                     SLNGLFNMLNQKKDVGKTVASIIMLIESMAKITNSYVIIASMVRYKKEEGWILSPTGK
                     RLIETKNSKKILLENGKGGILVNDMDDSSKLLIPASLIPLV"
     gene            complement(1348..1623)
                     /locus_tag="VEJ68_06255"
     CDS             complement(1348..1623)
                     /locus_tag="VEJ68_06255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015020971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HXX06404.1"
                     /translation="MVTKIHCAHILVEKLSVAQEIKMKLSKGESFANLAKQHSIDSSK
                     NRGGDLGLFGRGVMVKEFEKAAFALEKGQISDIVKTQFGYHVIKRLD"
     gene            1792..>2036
                     /locus_tag="VEJ68_06260"
     CDS             1792..>2036
                     /locus_tag="VEJ68_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HXX06405.1"
                     /translation="MPVGIIPDIGEQMCIGCALCVEICTSLGPDVLRVKPVEGWKRGK
                     AFVFYPERCISDGACIGVCPTKAIFWMRPMDFTPGQPV"
BASE COUNT          684 a          383 c          378 g          591 t
ORIGIN      
        1 gccatccaaa gataaaggac gaacccccgc tcatctatca tcgtaaaaat atggatgtag
       61 caaaatctat gaaattttta aacgattaca aggcctcact tcaagatgaa agacgacagc
      121 tattagaccg ctactacttg gtagattctg caataaaggt cgttggcata ggaagtgttg
      181 gaactcgttg cattatcagt ttgttttttg cagagggaga agaaccatta tttcttcaaa
      241 caaaggaagc tcgaagatct gtattggagg atcctacagg caagagccgt tatgatcttc
      301 agggtcatcg tgttgtacat ggacaacgcc taatgcaatc tgcaagtgac atatttcttg
      361 gctggcaacg atcagactct ggacatgatt attacattcg tcaattccac gatatgaaaa
      421 tcgcagcggc agttgaaact ttcaaaaccc gtactcttat agactatgca ataatgtgtg
      481 gttggacatt ggcaagagct cattcaaaag caggtgatgc atcaatgata gctggatatt
      541 tggggtcaaa agaaaaattt gatgacgcgt tagtacaata tgccacatca tatgccgacc
      601 aagtggagcg tgactttaaa gcctttaagg cagcgattca atccggcagg cttagaacaa
      661 aaccaaaaaa aggggactcg cttgagtttg aaatttaact ctcaatttca aattgcattc
      721 atagaaatta tattttaact aagaagaacc atgttcaaca atgataacaa ggatcctgta
      781 aaacctgaaa aaattctttc tcagaaaaag ataaactcta tcttgtattc tgatcctttt
      841 gtaaaagctg gtttcatttc aaaactagtc aaagatacaa acatcaatgt attgtatctg
      901 gatcttgacc tgttgtatag tggttatatt acctcagaaa taattccatc acagaagaat
      961 ctcactctgt ttcaaccaac atctgataca atcgtagaaa tgttaacaga aatattggcc
     1021 aaatctagca tttcacaatc tctgatcata gtagattcat taaatggtct ttttaacatg
     1081 ttaaatcaaa aaaaagatgt gggaaaaaca gtggcctcaa ttatcatgtt aatagaaagt
     1141 atggctaaaa taacaaattc ctatgttatc attgcaagca tggtaagata caaaaaagaa
     1201 gaaggttgga tcctatctcc tacaggaaaa cgtttgattg agacaaaaaa cagtaagaaa
     1261 attttactcg agaatgggaa aggaggaata ttagttaatg atatggatga ttccagcaaa
     1321 ttgcttattc cggcaagcct cattccacta gtctaatctc ttgattacat gatatccaaa
     1381 ctgggtcttt acaatgtctg agatctgtcc cttctctaag gcaaatgctg ctttctcaaa
     1441 ttcttttacc atcacccctc ttccaaaaag gccaaggtca ccgcccctat tttttgaaga
     1501 atctattgaa tgttgttttg caaggtttgc aaaactctcg cctttggaca atttcatttt
     1561 gatctcttgt gccacactta gcttctcaac tagtatatgt gcacaatgaa tcttggttac
     1621 cacaacaata aattaaaaac aaattataaa aaaacgtcga tctcaaacca tcattccaag
     1681 tttttagaat atgtcgatca gaatctaaca ctgttataaa attctcaaac gccgttataa
     1741 cagccatttt ttgagcaagt tatattaaga tctgttcgta gaatattgaa catgccagtt
     1801 ggaattattc cagatatagg cgaacaaatg tgcataggat gtgcactctg cgtagagatt
     1861 tgtacatcac taggcccaga cgtattaaga gttaaaccag tagagggctg gaagagaggt
     1921 aaagcatttg tattttatcc agagcgctgc atctcagacg gtgcatgcat cggtgtttgc
     1981 ccgacaaagg caatcttctg gatgagacca atggacttta ctccaggaca gccagt
//
LOCUS       DASPUS010000260         2677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1911245, whole genome shotgun sequence.
ACCESSION   DASPUS010000260 DASPUS010000000
VERSION     DASPUS010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 2677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2677)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2677
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1911245"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..1204)
                     /gene="speY"
                     /locus_tag="VEJ68_06265"
     CDS             complement(140..1204)
                     /gene="speY"
                     /locus_tag="VEJ68_06265"
                     /EC_number="2.5.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015018115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase"
                     /protein_id="HXX06406.1"
                     /translation="MDPHSFRGKDIPHLKVKPNMGIDDLVEIFASTGYNARQLGEAAK
                     LYCKMIEDDATICLTVSGAMTPVGFGGLFKSLIERGFVDWIIATGANVYHEDHFAWKL
                     PVKQGHFEVDDMVLYEKDIVRIRDVYIKGEETLKAEDLIVQRMFTNQLIDRPFTTAEF
                     CNAMGKYSKMHSKHPEKSFVVTAYDYDVPVYVSTLKDSSLALDLAPLRLANKVYNLDF
                     VREIIEQAAILYNSKKAGIVEIGGGVPKNTAQQTGPLLDQILGLGHGGQNYIIQITDA
                     RPDTGGLSGATLQEGKSWGKVKDAHEDVIMVYADATIAFPVLCLYALSTEKPRKPKRL
                     YKKLGKYYKDLSETYFSKKR"
     gene            complement(1289..1411)
                     /locus_tag="VEJ68_06270"
     CDS             complement(1289..1411)
                     /locus_tag="VEJ68_06270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06407.1"
                     /translation="MTTTAWKCYMCNLTFKEKDHASMHDKVSRHSAVEVKMAVA"
     gene            1533..>2677
                     /locus_tag="VEJ68_06275"
     CDS             1533..>2677
                     /locus_tag="VEJ68_06275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HXX06408.1"
                     /translation="MANFKLGKWNLSELVDYPDSPAFKKKLDEIELDVKKFEKNRHIL
                     SHGISEKKFLSILHALEDISEKFSAISGYASLGYSADTQSDKATSLLTRMGKLGSEIE
                     NRTLFFDQWWKKQIDEKNAQRLMKNSGMLKEFLRFKRLVAKYSLSEPEEKIINTLDVT
                     GHSALVKLYDKITNSYKFTVKINGKARIYTREELTQFVRSPKANLREIAYKSLLTQYD
                     NNKGVLGEIYQNIVLNWKDECIQIRGYKSPISVRNIGNDVDDKTIESLLNVCRKNSEV
                     FRKFFLLKARLLKVKKLRRYDIYAPVQKKEEKKYSYNDGVKLVLRTLNAFSPKLNDYA
                     KKVFVENHVDSEIRNGKRSGAFCSTITPKITPYVLLNYKGRSNDVFTL"
BASE COUNT          875 a          518 c          475 g          809 t
ORIGIN      
        1 ctacctccaa agtagaaggt actggcttga gtatttctgg caattcaaag aagacagtct
       61 tgtgtaaaga acactacaaa gaatggaaaa aagctacaaa agatgaacgc gatgtagaaa
      121 gagccagata tgacagattc tagcgtttct tactaaagta ggtctcagat agatctttgt
      181 aatatttacc taattttttg tacaatcgtt ttggttttct tggtttttca gtactcaatg
      241 cgtaaagaca aagtactgga aatgcaattg ttgcatctgc gtaaaccatg atgacatcct
      301 catgtgcatc ttttaccttg ccccaacttt ttccttcttg aagtgtggca cctgaaagcc
      361 caccagtatc tggtcttgca tcagtgattt gtatgatata gttttgccca ccatgtccta
      421 acccaagtat ctgatcaagc aaaggtcctg tttgctgtgc agtatttttt ggtactccgc
      481 ctccaatctc tactatacca gcttttttgg aattgtataa tattgccgct tgttcaatta
      541 tttctcttac aaaatctaag ttgtatacct tatttgcaag tctaagaggc gccaagtcca
      601 atgcaagcga tgagtccttc aaagttgaaa catatactgg aacatcgtaa tcatatgcag
      661 ttactacaaa gcttttctca ggatgttttg aatgcatttt tgagtatttg cccatggcat
      721 tgcagaattc agcagtggta aatggtcgat caatcaattg gtttgtaaac attcgctgta
      781 ctatcagatc ctctgcctta agcgtctctt ctcctttgat atagacatct cttattcgta
      841 caatgtcttt ttcgtataat accatatcat caacctcaaa gtgtccttgc tttactggca
      901 atttccatgc aaaatggtcc tcatgatata catttgcacc tgttgcaatt atccaatcca
      961 caaatcctct ctcaatcaag gatttgaaga gaccaccaaa acctacaggt gtcatcgccc
     1021 cagacaccgt aaggcatatg gttgcgtcat cttcaatcat tttacaatat agtttagccg
     1081 cttcacctaa ctggcgtgcg ttataccctg tacttgcaaa gatttcaacc aaatcatcta
     1141 tacccatatt gggcttgact ttcagatgtg gaatatcttt tccacggaag ctgtgaggat
     1201 ccacgaacgg gtaactaatt ttggactaaa taaatacttg ccaacatgat ttatggtcaa
     1261 aatttagttt gaagatgaaa tgaaaaaatt atgcaactgc cattttgact tcaactgcag
     1321 agtgtcttga tactttatca tgcattgagg catgatcttt ttctttaaag gtcaagttac
     1381 acatgtaaca tttccatgct gtcgttgtca tgacattata attacaattt tcatatttaa
     1441 gacccgcgta tgatttgtac tgctgataac ggtctgaaaa caccgtacat ctcacataac
     1501 tttttaatta caatcatact cattcgagat gcatggcaaa ttttaaactg ggaaaatgga
     1561 atctaagcga acttgtagac tatcctgatt ctcctgcctt taagaaaaaa cttgatgaga
     1621 tagaactaga tgtaaagaaa ttcgaaaaaa ataggcatat tctaagccat ggcatatcgg
     1681 agaaaaaatt cttatcaatt ctccatgctt tggaagatat ctctgaaaaa tttagcgcca
     1741 tctctggtta tgcctctttg ggatactctg cagatacgca atcggataaa gccacatcac
     1801 ttcttaccag gatgggaaaa cttggctcag agatagaaaa ccgtactttg tttttcgacc
     1861 aatggtggaa gaagcaaatt gatgaaaaaa atgcccaaag actaatgaaa aattctggga
     1921 tgctaaaaga attccttagg tttaagcgac tagttgccaa atactcacta tcagagcctg
     1981 aagagaagat aatcaatact ttagacgtta ctggccactc tgccctagtc aagctgtatg
     2041 ataaaatcac caattcttac aaatttacag taaaaataaa tggcaaggct agaatctata
     2101 caagagaaga attaactcag tttgtaagaa gccccaaggc aaacttgagg gagattgcct
     2161 acaaatctct cctgacacaa tatgacaaca ataaaggagt actaggagag atctatcaaa
     2221 atatcgtgct caattggaaa gacgagtgta tacagatacg cggctacaag tctccaatct
     2281 ctgtcagaaa cattggaaac gatgtggatg acaagaccat tgaatcgtta ctaaatgtct
     2341 gtcgaaaaaa ttcagaagtc tttcgcaagt tctttttgct taaggcacga ttgttgaagg
     2401 tgaagaaact cagaagatat gacatttatg caccagttca aaaaaaggaa gaaaaaaaat
     2461 attcgtataa cgatggagta aaattagtat tacgtacact taatgcattt agtcccaaat
     2521 taaacgacta tgcaaaaaaa gtatttgttg aaaaccacgt agattctgaa attcggaatg
     2581 ggaaaagaag cggagctttt tgcagcacca taacaccaaa aattacacca tatgttctct
     2641 taaattataa aggaagatcc aatgatgttt ttaccct
//
LOCUS       DASPUS010000261        14440 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1091291, whole genome shotgun sequence.
ACCESSION   DASPUS010000261 DASPUS010000000
VERSION     DASPUS010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 14440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14440)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14440
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1091291"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..314
                     /locus_tag="VEJ68_06280"
     CDS             171..314
                     /locus_tag="VEJ68_06280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06409.1"
                     /translation="MKVTFVAIMLTMMSSTTVLLPEASALTPRTDFNDNHFTYHTFST
                     IRI"
     gene            complement(374..541)
                     /locus_tag="VEJ68_06285"
     CDS             complement(374..541)
                     /locus_tag="VEJ68_06285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06410.1"
                     /translation="MDTKEENPLFPISKVVILVIFPFYVSVIFPELPVDDCGPYMLRK
                     LVEGTVPPFWI"
     gene            complement(841..1281)
                     /locus_tag="VEJ68_06290"
     CDS             complement(841..1281)
                     /locus_tag="VEJ68_06290"
                     /inference="COORDINATES: protein motif:HMM:NF039409.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6328 family protein"
                     /protein_id="HXX06411.1"
                     /translation="MANNDDKTPKDRLTPDYGSLIRESAVLTTFSVFLFGFLLNMSIN
                     SSKSFVILDKIILLIALFSITISAVLFIMPIIYHHLEYPYLDFEKFKARSHRFTLFGL
                     IPTMVTLFFGLQLATRALIENFTVSVLLSMIPFVLIYVFYRWRK"
     gene            1745..1921
                     /locus_tag="VEJ68_06295"
     CDS             1745..1921
                     /locus_tag="VEJ68_06295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06412.1"
                     /translation="MKGMDYKRFREHAVEFYMTTEGRLSRAEVIKRLESFIVQKQGEG
                     TDFFDKYQVREEKS"
     gene            complement(1918..3630)
                     /locus_tag="VEJ68_06300"
     CDS             complement(1918..3630)
                     /locus_tag="VEJ68_06300"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008300462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HXX06413.1"
                     /translation="MKDFGTLEYVLDTYSKNWTWKLTGNRAVSMVARVIPQAWYGNGP
                     DEAIVPDTEHNVKKIKWIMERYPLEIRSKFIWQRKTKHMIIPKKKYTRIEKLRKANPG
                     PQFRGTLFDFQREGLDFLTKTSGNALLADDMGLGKTIQTLAYLATEKQAFPALIVAPL
                     VTLTNWQREIEKFLKKKSRNGKIVEDNHPTSTLIRTGKSQDLGRHDFYIINYDLLYKR
                     IGDLAKLNIKTIVCDEVQHLRSKSTKKYASVKELAALDSVKYRIGLSGTPIYNRGSEI
                     WPIVDILRPGLLGSFEEFCEYFCYVNEKGKAIVLENKRTSLGDELRKHVMLRRKKSDV
                     LKELKEKVRYKEFIDSDINYYHSELDKIWKRLEEEQMTAVSAFDKFSAYKRAIQSERQ
                     AAGIAKLPHVIEFVKNIMEIEESVVVFCHHKAIHELLHKSLQEYSPSAIIGGQTDKER
                     QDGIDRFQNGETKLLIAGLRAGNVGINLSRARYVIFAELDWSPAIHRQAEDRLHRIGQ
                     KNTVFAYYLIGNGTLDDHVANVLVDKSYEIDAIMDEKVEAFENKEKAEMILAQIHDKI
                     AAKR"
     gene            3950..4996
                     /locus_tag="VEJ68_06305"
     CDS             3950..4996
                     /locus_tag="VEJ68_06305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CorA family divalent cation transporter"
                     /protein_id="HXX06414.1"
                     /translation="MIKEVSVACIQEGAPIKKPSCTLEEALHTISVGNLTWIECVVDN
                     IIEETPKILGKLGIVIDSSHLLSGYVSNYEDAGDTLGLMIPFVVPGNNKTETAPLLIF
                     IKKDLIVTIHDDYGGKITRLYSYAHTLLKKLPKEPDLWADRQTILLARIIDEISEANY
                     SILRLIVERVEQFEIDLAGSRQVTRDISLELSNMKTSLLTYLNAIWATYDTVHNLKYG
                     DAELISDNESILAKFEVILGRLDRQIQMSENVMQMVATGVNVIQTEVTNKVTILIIWW
                     TVAGTAELVPNTIATVFGLYPAHEAQFWPIVATISISALLATAVAYFYVRKFFGQTLR
                     MEKLRRIRKKFVRS"
     gene            5055..5336
                     /locus_tag="VEJ68_06310"
     CDS             5055..5336
                     /locus_tag="VEJ68_06310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5615 family PIN-like protein"
                     /protein_id="HXX06415.1"
                     /translation="MKVLVDEMYDGIDIKLKEFGYEAYSVKKLIVEGKKLTSDYSVIR
                     YAEENRMVLITEDTEVGKACKENNIQCVLLDTETIFKMILEELENFKTR"
     gene            complement(5323..5952)
                     /locus_tag="VEJ68_06315"
     CDS             complement(5323..5952)
                     /locus_tag="VEJ68_06315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013826234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HXX06416.1"
                     /translation="MVALEIISNLTNFIIQTISNSGYLGIFFLMVAESALIPIPSEVI
                     MPFSGYLVSTGKFNIIAVIMAGSIGNLVGSLIAYFVGVYLGRGFVIKYGKYVLLKKSH
                     LETAESYFKKYGNRATFISRLLPAIRTYISLPAGVAKMPLKKFAAYTLIGSIIWNTAL
                     TYIGITLGQEWESIRKYSSYFDAIVIIAVIVGIILYLKRRKTTESSTES"
     gene            complement(5996..6160)
                     /locus_tag="VEJ68_06320"
     CDS             complement(5996..6160)
                     /locus_tag="VEJ68_06320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013481678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06417.1"
                     /translation="MGLFKKEKATETKCKECGLELHDPVRLDRHMKKAHKHASQKNFD
                     EPGTTTTGMW"
     gene            complement(6203..7090)
                     /locus_tag="VEJ68_06325"
     CDS             complement(6203..7090)
                     /locus_tag="VEJ68_06325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010193927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HXX06418.1"
                     /translation="MKAINPLSVLLWTFRRNESDVVNLYDTLSSLMQISTGGNMLNFG
                     HWNKNTTNPLEAQNSLCNIVGDMADLKSATTVLDVGSGFSEPALLWKSEFPHIDLLCM
                     NVNLSQLQFGSRLITMSLTSQGSDHEINRLGLVNATSIKIPLKDNSVDRVIALESAQH
                     FKPLNEFVSESKRILKNNGSLVMAIPTVSSELRAPEILKLGILSFTWSSEHYQYKEIE
                     KIILKNNFQISDKRFIGANVYAPLADYYIKNRETLKTKILEKYPAIVEKILFKSMIKM
                     KEVSQKGIIDYILLKCTSE"
     gene            7209..7460
                     /locus_tag="VEJ68_06330"
     CDS             7209..7460
                     /locus_tag="VEJ68_06330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018003564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06419.1"
                     /translation="MDSCDTRTRAYKNGKTFDQCKEIAEKISSNLAKKINDLGEVSWT
                     EILEVSEHDELVYKLTLKYLRRDGFNIGDWKMPKVTKTT"
     gene            complement(7453..8292)
                     /locus_tag="VEJ68_06335"
     CDS             complement(7453..8292)
                     /locus_tag="VEJ68_06335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06420.1"
                     /translation="MEKQSTVHRSHRVLIILGFIAIAVSFIAYSRNEDLTVTPAAMPA
                     LQRMAIATYLILFISFVAIGWGLYKYYKAKVAIPDKSISSIISNAINNKRAKQIFVAS
                     AIGYGIFFAFTSGIILYKPDINATDYGFPNPPHIELSPCCDLPGYMPMIFAFFTEHVG
                     LQIVPLNLVLAVTVSFLVGLNFALSFTTFSIAKSGKRMGAFGAITGLFVGCPTCAGTA
                     FTILFGLGASATSVTLFLTSYEAQLQTIFIAISIPILLVTPFIMARKIRSSQNDSCEI
                     DSM"
     gene            8378..8803
                     /locus_tag="VEJ68_06340"
     CDS             8378..8803
                     /locus_tag="VEJ68_06340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008300347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nuclease domain-containing protein"
                     /protein_id="HXX06421.1"
                     /translation="MKIDEPQDSDYVETKISYVGFVDPYGVEGLVILRADDGKEFHMR
                     SFSGEVARHITNFIEGERDTIPTIYNMIEEISELNELVLVRIKVYESGSVLRANLYFT
                     GKHEFVMRNYRASDAIALASFYNIPILVRKTLLKEKMEA"
     gene            complement(8800..9891)
                     /locus_tag="VEJ68_06345"
     CDS             complement(8800..9891)
                     /locus_tag="VEJ68_06345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014965035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--phosphoribosylaminoimidazolecarboxamide
                     ligase family protein"
                     /protein_id="HXX06422.1"
                     /translation="MIKRSDIQKIVNEYSDLTVGVLGSHSALEVMDGAKDENLQTLVV
                     CQKGREKPYKRFARIADNIIVVNKFKDMASLKIQSRLREANAIIVPHRALTAYLGYES
                     VENKFKIPLFGNRKLFQAEERANKKNQYYLLEKAKIRHPKIFKNPKDIDRPVIVKVQE
                     KSRNLERAFFNVSSYSEYKDKTETKIRQGLISRDALKIASIEEFTIGTYFNFNYFHTP
                     ISEEVDFLGIERRLQTNLHDFVSMPARQQLETNIELQNIEVGHTPASIRESLLEKVIE
                     AGDKFVDAVKREYPPGIIGPFSLQSVITKDLDIVVYDVSLRVPGNPILATTSPYTKYK
                     YGSTFGVGRRIAMELKRAQAEGKLKEIVT"
     gene            complement(9927..10103)
                     /locus_tag="VEJ68_06350"
     CDS             complement(9927..10103)
                     /locus_tag="VEJ68_06350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007550412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HXX06423.1"
                     /translation="MAYENVIIAVVIIGILIFGVKKIPELARTFGKAKGEFEKGRIES
                     EKELKEFKDKEDLK"
     gene            complement(10125..10922)
                     /gene="tatC"
                     /locus_tag="VEJ68_06355"
     CDS             complement(10125..10922)
                     /gene="tatC"
                     /locus_tag="VEJ68_06355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018036729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HXX06424.1"
                     /translation="MAKEMTFMEHLEELRKRVFKMILAVGIVTFFILGFHLTPFFYNG
                     IHLYYPTFSPFSNIAAQLTIIMKHQLLPPSVQLIQTAPGQAFFSQFYIAVLLGIVVAM
                     PVIVREFMEFLSPALHHKEIHIIKSATVPSIVLFIAGCLFSYFVVTPFTLEFLYRYGE
                     SAGLITFLNIVDFINFVLQFLLAFGISFQLPLIMYAVTISGMVDARFWRKNIKWAVIA
                     IVILGAAITPDGSGITMWFVAGPLIGLYLIGMFLSEKRANQIATLKS"
     gene            complement(11141..11599)
                     /locus_tag="VEJ68_06360"
     CDS             complement(11141..11599)
                     /locus_tag="VEJ68_06360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06425.1"
                     /translation="MTRLRYWKLTVEDLRKAQYDPKKVLVWEIKCTKDDKGTHFGVFC
                     YRNGTPWDYASIHGIVFYHNQITQEEVNRITKFLKDKFGGEPTEKGSRIFLKNSREIY
                     QPKEIADLAVQLGDTFEGSTELTVELENFSAPEQEQSNLPSSKILPIPGK"
     gene            11753..12061
                     /locus_tag="VEJ68_06365"
     CDS             11753..12061
                     /locus_tag="VEJ68_06365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014962873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HXX06426.1"
                     /translation="MLFGVFAIHSPESCPLNNAKSKKIFLEIEKKMKLNSKKFNITKV
                     IAFYMSVLEHEWIIIMDAKNAHDIEQLCIAVGISSISTVKIVPINDFRVALKKISKMT
                     "
     gene            12124..12612
                     /locus_tag="VEJ68_06370"
     CDS             12124..12612
                     /locus_tag="VEJ68_06370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012215634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HXX06427.1"
                     /translation="MEVVPIDRLELLGEMEERYKQKDKEYFVQLLDHNDFVIRCRAVC
                     ILVDMGGEDVVPQVAKVLKNDPNELVRHEAAFSLGQMCLRSGIGPLEDATRNDPSLFV
                     RHEAAVALGVIGSQDAKETLQKALRDSSEQVRDSAVVALSNLKFMEKLSKNEKFARLT
                     GG"
     gene            complement(12609..>14440)
                     /locus_tag="VEJ68_06375"
     CDS             complement(12609..>14440)
                     /locus_tag="VEJ68_06375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="SMC family ATPase"
                     /protein_id="HXX06428.1"
                     /translation="KIDAKGTTSAQLYEQTDGELKPIAAGERKQFGESMTKTIETLIG
                     LDFQKLKVASLVQQGELQSIINADPKKFKELVNAIIGIDRLDVAYELMKKSIDVFRES
                     VKKRLEYDDTSIEILKTRSENIKKEIDIIEPQRKKMEAGKKNQEEEFIVLQQKIEFQS
                     PKEVKMTELESRKNELSGYLKNAISSLKNEISEKEKKLEECTSCLQIVSSKSETENQI
                     KSLEQEIEKTRLHIRDASEKIGKLNGQQEIAEKLRLVDGKCPVCDSKVDHLSPLFEEQ
                     HVRTELENLQKSMDLWNKSEKTTSDSIKTLDSKLRQIIKAENTLNLNKVKDENDLLKL
                     KEEIFSLRTNIENVPHEITASGNLLQFAIDDHSSSLIKTISSLQEETQNFDRVEFKEL
                     KTTLEQKRRSLSILDQELGAINQKIKSFREEEQKIANTLEELQIVRQYVTQLETIRNQ
                     IYNRDGPVASSLRSWALNMISQKASEYLVTFNVKIQRVVLEDKARDIGITCYAGNTHL
                     DLESLSGGEKVSLALALRFGMAHLMGSSNLGFIILDEPTTHLDQERRKSLVNVLTQAF
                     EANLDTISQFVIITHDSEIFENSNVDTIYSFESGHDGTKVTSI"
BASE COUNT         4305 a         2671 c         2655 g         4809 t
ORIGIN      
        1 agcagaacta ctctactcaa ataagatcaa ctctacaaac tctactatac aaattccgtg
       61 agcatattcg atctatctgc tacatataaa gaccaacaaa aatcaagata aaacgcttgc
      121 gtagaatttc ttagtaatta ttttaattta catcacgtac tctgagtcaa atgaaagtca
      181 catttgttgc aataatgctt actatgatgt catcaacaac ggtactcttg ccagaggcaa
      241 gtgcacttac accgcgaacc gatttcaatg acaaccattt cacgtatcac acttttagta
      301 ccatacgcat atgaggtgac cgtatatgta cacatgacga gtgggatcaa tggattggcc
      361 agcttatgtc tagtcaaatc caaaatggag gtactgttcc ttctacaagt tttctcagca
      421 tgtatggtcc gcagtcatca acgggtagct caggaaatat gactgataca tagaatggaa
      481 aaataaccaa gattacaact tttgatatgg gaaacaacgg gttctcctct tttgtgtcca
      541 tatcgtatga cggatatctt cagataaatc atatcgcagt atcccagaca agctcaggga
      601 tcacaattca cagggcatgg attgaaccgc atggtcttct gttattacgc cagaaagtgt
      661 aacctttgat tcaaagcaaa cagtattgca ccataatagt gtcatcaata ttgttctagc
      721 caccgatgga aaaccatctt tttcacttga cacactttca tcaaatccat tacaatattg
      781 aaccacttct cagttatgga aaaataaaac tgattgattc tgcaacgtac aattaatgtt
      841 ctactttctc cacctgtaaa atacgtaaat tagaacaaaa ggtatcatgc ttagcagaac
      901 tgagacagtg aaattttcta tcaatgctct tgtagcaagc tgtaatccaa aaaataaagt
      961 aaccattgta ggaattagtc caaacaaagt aaatctgtga cttctcgctt taaatttttc
     1021 aaaatcaaga tagggatatt ctagatggtg gtaaattatg ggcatgataa agagcacggc
     1081 agatattgta atagaaaaca aagctatcaa tagtataatc ttatcaagaa taacaaaact
     1141 ctttgaagag ttgattgaca tgtttaacaa aaatccaaac aaaaataccg aaaatgttgt
     1201 taataccgcg ctctctctta tcaatgagcc ataatccggg gtcagcctat cttttggagt
     1261 cttgtcatca ttgtttgcca atttattttc ctaatgccgg taaactttaa tcacaaatga
     1321 gggtttctct tctaatcagg tttaatgggt tttattattc ctcgtcatca tccatgattt
     1381 catactcttg agaatacagg ataaatgatc ttttgtacaa gcttggcctt gcactgtaaa
     1441 tgacaaagct catagtataa tcaactcatc ctctgtattt ggcatttcga ttattttatg
     1501 gcgttccttg ctcatggtag tagtagatcg ttcagaacca ggtgaggatc tgagttctta
     1561 gtacacgagc aaggagatat cgccatcttc tgaatagcag ttttggttat tagtggtccg
     1621 atatattcat gaacaaaatt tttattatat gaaattagta attattattc tgagtctttt
     1681 cttagaccta ttgtgatgtt ctaaacacaa aaaactagat gtagtacttt agctaaatta
     1741 tatcatgaaa ggcatggact acaaaagatt cagagaacat gcagtagagt tttacatgac
     1801 tacagagggc aggcttagcc gcgccgaggt aataaagagg ctagaatcgt ttatagtgca
     1861 aaagcaggga gaagggacgg atttctttga caagtatcag gtaagagagg aaaaatctta
     1921 acgctttgca gcaatcttgt cgtggatttg tgccaatatc atctctgcct tttccttatt
     1981 ctcaaatgct tctacctttt catccataat ggcatcaatc tcatagcttt tgtcaactaa
     2041 gacgtttgct acatggtcat ctagtgtacc atttcctatc aagtaatacg caaatacggt
     2101 attcttctgg ccaattctgt ggagtctgtc ctctgcttgc ctgtgaattg cagggctcca
     2161 gtcaagctcg gcaaatatga catatcttgc tctactcaaa ttgattccaa cgtttcctgc
     2221 acgaagacct gcaatcagta gcttggtctc accattttgg aatctatcta taccgtcttg
     2281 tctttcttta tcggtctgac ctccaattat tgcagatggg gaatattctt gaagactctt
     2341 gtgtagtaac tcatgtattg ccttgtgatg acaaaatact acaacactct cttctatctc
     2401 catgatattt tttacaaact cgatgacatg aggaagcttt gcaattcctg ctgcctgtct
     2461 ttcgctctgt atagctctct tgtatgctga gaacttgtca aatgctgata ccgccgtcat
     2521 ctgttcctcc tctaatctct tccatatctt gtctaattcg gaatgatagt agtttatgtc
     2581 ggagtcgatg aattccttgt atcggacttt ttccttcaat tcctttaata catcagactt
     2641 tttgcgtcgt aacatgacat gttttctaag ctcgtctcca aggcttgttc gcttgttctc
     2701 aagtactatt gccttccctt tttcatttac ataacaaaag tattcgcaaa attcctcaaa
     2761 gcttcccaaa agaccgggcc tcagtatgtc aactattggc caaatctcag agcctcgatt
     2821 gtatattgga gtacccgaaa gtcctatcct gtactttact gaatctaatg cagcaagctc
     2881 ctttactgat gcatattttt tggtagactt tgatcttaag tgttgcacct cgtcacaaac
     2941 aatcgtcttt atgtttaatt ttgcaagatc cccaattcgc ttgtataata gatcataatt
     3001 tatgatgtaa aagtcatgtc tgcccaaatc ttgggattta ccagttctaa ttagagttga
     3061 ggtcggatga ttatcctcaa ctatttttcc gttgcgactt tttttcttca agaatttctc
     3121 aatctctctt tgccagttag taagagtaac aagcggtgca acaattaatg ctggaaatgc
     3181 ttgtttttcc gtagcaagat atgccagtgt ctgaatggtc tttcccaaac ccatgtcgtc
     3241 tgctaaaagc gcattgccag aagtctttgt gagaaagtcc aaaccttctc gctgaaaatc
     3301 aaacaaggtc ccacgaaatt gtggaccggg atttgcttta cgtaattttt ctattcttgt
     3361 atattttttc tttggaatta tcatgtgttt tgtttttctt tgccaaatga attttgatct
     3421 tatttctaga gggtatcgtt ccatgatcca ttttatcttc tttacattgt gttctgtgtc
     3481 aggaactatt gcctcatcag gtccattgcc ataccatgcc tgtggaatga cacgtgctac
     3541 catgctcaca gccctatttc ctgtaagctt ccatgtccaa ttttttgagt atgtatccaa
     3601 gacgtactct agagttccaa agtctttcat agattgttaa ttctccgagt gttgggtgaa
     3661 aaccacttat gaacttttaa ttttgcatga aaaatagaaa tattgccatt ttgtctctga
     3721 tttgaattaa ttttggtgta aatgatccaa attgtctaaa ttagtagcca ataaattaaa
     3781 aattaatcaa aacattaaac catgctttgc aatgctgttg actttgatta ggtggtatcg
     3841 aggagagcat aggtctttca tccgcctttt taggaaaaaa atatcgacca tgatggcttt
     3901 gtcaaatttc acaaataggt gtatataaga tgaaactgga tctctgggca tgataaagga
     3961 agtcagtgtg gcctgcatac aagagggcgc tccaatcaaa aaacctagct gtactttgga
     4021 ggaggcatta catacaattt cagttggtaa tttgacttgg atagaatgtg tagtagataa
     4081 cataattgag gaaaccccaa agatacttgg caaactcggt attgtcattg attccagcca
     4141 tcttctttct ggatatgttt caaactatga agatgcaggt gatacactag gactaatgat
     4201 tccttttgtg gtaccaggaa acaacaaaac agagacagct cctttgttga tatttatcaa
     4261 aaaagatctc attgttacaa tacatgatga ctatggtggc aaaattactc gtttgtatag
     4321 ttatgcacat acacttttga aaaaactccc caaagagcct gacctatggg ctgacagaca
     4381 aactatactg cttgcaagaa ttatagacga gataagcgag gccaattatt ctatactgag
     4441 attaattgtt gaaagagtag aacagtttga aatagatctt gctggttcaa ggcaggtgac
     4501 aagggatatc tctcttgagc tctcaaacat gaaaacatct cttctgacat atcttaatgc
     4561 aatatgggct acatatgata ccgtacacaa tctcaagtat ggcgatgcag aacttatctc
     4621 cgataacgaa tcaatacttg caaagtttga ggtaattctc ggaaggctag acaggcagat
     4681 acaaatgtca gaaaatgtaa tgcagatggt cgcaaccggt gtaaatgtta ttcagaccga
     4741 ggtaacaaac aaggtgacca tacttatcat atggtggaca gtagctggaa ctgcagaact
     4801 tgtgccaaat acaattgcta ctgtctttgg tttgtatcct gcacatgagg cacagttttg
     4861 gccaattgtt gccacgattt caatctcagc tctgcttgca accgcagtag catactttta
     4921 tgttcgaaaa ttctttggac aaacactgag gatggaaaag ttaagaagaa ttagaaagaa
     4981 atttgttaga tcttaatttt aatcaaatac aaaaatcagt ataaataaca gatattggtc
     5041 atcaagaaaa tacaatgaaa gttctagtag atgagatgta tgacggtatt gatatcaagc
     5101 taaaagagtt tggatatgag gcttatagcg taaagaagct tattgtagaa ggaaagaagc
     5161 taaccagtga ttattcggtc atccgatacg ctgaagaaaa cagaatggta ttgataactg
     5221 aagataccga ggtgggtaaa gcgtgtaaag aaaacaacat tcagtgtgtt ttgctagata
     5281 ccgagaccat attcaagatg attctggaag aacttgagaa ttttaagact cggtagagct
     5341 ctcggtggtt tttcttcttt tcaagtataa aataattcca actattacgg caattatcac
     5401 tattgcatca aaataactag aatattttct aatactctcc cactcttggc ctaatgtaat
     5461 tccaatgtat gtcagagcag tattccaaat gatggaacca atgagagtat atgctgcaaa
     5521 ttttttcagt ggcatttttg ctactccggc aggaagagag atgtaagtcc ttatggcagg
     5581 aagtagtctg ctaatgaatg tggctctgtt accatatttt ttaaaataag attccgcagt
     5641 ctccaaatgg gattttttta ataaaacata ttttccatac tttatgacaa atcctcttcc
     5701 taggtatact ccgacaaaat atgcaattaa tgaacctaca agatttccaa tggaccctgc
     5761 cattatgact gctatgatgt tgaacttccc ggttgaaaca agatatccag aaaatggcat
     5821 tatgacttca cttggtattg gtatcagcgc actttctgca accatcaaaa agaaaattcc
     5881 aagatatcct gaatttgata tcgtctggat gataaaattt gtaagattac taataatttc
     5941 aagagcaacc aaaattaggc tacttccttg aatggtgggc tatatcttgg taacactacc
     6001 acatcccagt cgtagtggta ccaggctcat caaagttttt ctgtgatgca tgtttgtgag
     6061 cttttttcat gtgtcggtcc aaacgtactg gatcatgtag ttccagaccg cattctttac
     6121 attttgtctc ggtagctttt tcctttttga ataggcccat ggtgaatctg ctctataata
     6181 ggtaataatt cttaccgtaa atctattctg atgtacattt gagaagaatg taatcaatga
     6241 tgcctttttg agaaacttcc ttcatcttta tcattgattt aaagaggatc ttttcaacaa
     6301 ttgctggata tttttctaat atttttgttt taagagtttc tctgtttttt atatagtaat
     6361 cagctagcgg agcataaaca tttgcgccaa taaacctctt atcagatatt tgaaaattat
     6421 ttttcaggat tatcttctct atctccttat actgataatg ttctgatgac caagtaaatg
     6481 aaagaatccc aagttttaaa atttctggag ctctaagttc acttgatact gttggtattg
     6541 ccattaccag tgagccatta ttttttagta tccttttact ctctgataca aattcgttta
     6601 acggtttgaa gtgttgtgca gattctagtg caatcactct gtctactgag ttgtctttca
     6661 atgggatctt gatagatgtt gcatttacaa gccctagtct gtttatttca tgatctgaac
     6721 cttgacttgt caaactcatt gtaattaatc gtgaaccaaa ttgtaattgt gacagattta
     6781 cattcataca aagtaaatct atgtgtggga attctgactt ccaaagtagt gcaggttcag
     6841 aaaatccact tccaacatcc aatactgtcg ttgcagattt gagatctgcc atatctccta
     6901 ctatattaca aagtgagttc tgtgcttcca gagggtttgt agtatttttg ttccaatggc
     6961 caaaattgag catatttcct cctgttgaaa tttgcattag tgatgacaag gtgtcataaa
     7021 gattgactac atcactttca tttcgtctaa aagtccaaag aagtacagag agtggattga
     7081 ttgctttcaa tagtgattat atcaaaaatt gttcttatta agatatgatt tttactctat
     7141 attggataca gagagacatg agagattctc gcctgacatt tttatttgag agttcattta
     7201 gaggatttat ggactcttgc gatacaagaa cacgagcata caagaacgga aaaacctttg
     7261 atcaatgtaa ggaaattgct gagaaaatat catctaatct tgctaaaaaa attaatgacc
     7321 tcggcgaggt gtcttggacc gaaattttgg aagtttctga acacgatgaa ctagtttaca
     7381 agcttacact gaaatatcta agacgcgacg gttttaacat tggtgattgg aagatgccca
     7441 aagtcactaa gactacatag agtctatttc acagctatcg ttctgtgagc ttctaatctt
     7501 tcttgccatt atgaatgggg ttacaagtaa aataggaatt gatattgcaa taaaaatagt
     7561 ctggagctga gcttcataac ttgtcagaaa tagcgtgaca ctggttgcac ttgcaccaag
     7621 tccaaaaaga atggtaaacg cagtgcctgc gcatgttggg catcctacaa aaagacctgt
     7681 tattgcgcca aaggcgccca tacgcttccc actttttgct attgaaaatg ttgtaaaaga
     7741 caaggcaaag ttaagaccaa ctagaaatga tactgtgact gctagaacta aattcagcgg
     7801 tactatctgc aatccgacat gctcagtaaa gaacgcaaag atcattggca tatagcctgg
     7861 cagatcacaa catggtgaca gctctatatg aggtgggttt ggaaatccat aatcggttgc
     7921 attgatgtct ggcttgtaaa gtattattcc tgatgtaaaa gcaaagaaaa ttccatatcc
     7981 aattgcactg gcaacgaaga tctgttttgc tcttttgttg tttattgcat ttgaaatgat
     8041 ggaagaaata gacttgtcag gaatagcaac tttggctttg taatacttgt acaatcccca
     8101 tcctattgca acaaaagaga tgaaaagtat gagatatgtt gctattgcca ttctttgaag
     8161 tgctggcatt gcagctggtg ttacagtgag atcctcattt cttgaatatg caataaaaga
     8221 aacagcaatt gctataaaac caagaatgat tagtacacga tgcgaacggt gcacagtgga
     8281 ttgtttttcc aataacgaaa gctggttttg ctaacattaa attctatctc ttttttccaa
     8341 agtatttatc tgcaatgata actcatagtg aattaacgtg aaaatagacg aaccgcaaga
     8401 ctctgattat gttgaaacaa aaatctccta tgtaggtttt gttgatcctt acggtgttga
     8461 aggtctagta attttacgag cagatgatgg aaaggaattt cacatgagat ctttttcagg
     8521 agaggtagca cgacacataa ctaatttcat cgaaggagag cgtgacacaa taccaacaat
     8581 atacaatatg attgaggaaa tatcagagct caacgagttg gttcttgtta gaattaaagt
     8641 gtatgagagc ggaagtgtat tacgtgcgaa tctttacttt acaggaaagc atgaatttgt
     8701 gatgcgtaac tacagggcat cggatgcaat agcacttgca tctttctaca acataccaat
     8761 acttgtaaga aagacgctgt taaaagaaaa aatggaagcc taggttacta tctctttcag
     8821 cttgccttca gcctgagctc gttttagttc cattgcaatt cttctaccta cgccaaaagt
     8881 acttccatac ttgtattttg tatatggact ggttgttgca agaattggat tcccaggaac
     8941 tctcaaagaa acatcataga ctacgatgtc caagtctttt gtgattacac tttgcaatga
     9001 aaaaggtcct attattcctg gtgggtattc tctttttaca gcatccacaa acttgtctcc
     9061 tgcttctatg accttttcta gtaatgactc tcgtatgctg gcaggtgtgt ggcctacctc
     9121 aatattttgt aactctatgt tggtttctag ttgctgtcta gctggcatag aaacaaagtc
     9181 atgaagattt gtttgcaggc gtctttctat tcctaaaaaa tcaacttctt cggatatggg
     9241 agtgtgaaag taattgaaat taaagtaagt gccaattgtg aattcctcaa tactggcaat
     9301 ttttagcgca tcccttgaga tgaggccctg tcttatctta gtctccgtct tgtctttgta
     9361 ttccgaatat gatgatacat tgaaaaatgc cctttccaga ttacgcgatt tttcttgaac
     9421 ctttactatt actggcctgt ctatatcctt tggatttttg aaaatcttgg gatgtcttat
     9481 ctttgctttt tcaagaagat agtactgatt ctttttattt gcacgttcct cagcttggaa
     9541 aagtttacgg tttccaaata atggtatctt gaatttgttt tctacagatt catatccgag
     9601 atatgctgtt aaagctctat gtggaacaat tattgcattt gcttcgcgta atcttgattg
     9661 aattttgagt gatgccatgt ctttgaattt atttaccacg atgatgttgt ccgctattcg
     9721 tgcaaatctt ttgtaaggtt tttctcttcc cttttggcaa acaaccagag tctgtagatt
     9781 ttcatctttt gctccgtcca ttacctccag tgcagagtgg ctaccaagta cgcctacggt
     9841 aagatcagaa tattcattga caattttttg tatatctgat cttttaatca tgcgatacct
     9901 attttgattg ggtaaaaaag cgttctttac ttgagatctt ctttgtcttt gaactctttt
     9961 agctcttttt cagattcgat tctgcccttc tcaaattcgc ctttagcttt gccgaatgtt
    10021 cttgccagtt ctgggatctt cttgactcca aaaatcaata tgccaataat tactactgca
    10081 attattacat tttcatatgc catggctaat cttaattgag cagattaaga tttaagtgtt
    10141 gcaatctggt ttgcacgttt ttctgataag aacatgccaa tgagatataa tccaatgaga
    10201 ggacctgcga caaaccacat tgttatgccg cttccatctg gtgttattgc ggcacctaaa
    10261 atcacaattg caattactgc ccattttatg ttctttctcc aaaatcttgc atctaccatt
    10321 ccagagatag taactgcata cataatgagt ggaagctgaa atgatattcc aaaggctagc
    10381 aaaaattgaa gtacaaagtt gatgaagtct acaatattaa gaaatgtaat cagtcctgca
    10441 gactctccat atctgtaaag aaactccaga gtaaagggtg taaccacaaa ataagaaaat
    10501 agacaacctg caatgaaaag tactatggat ggaactgttg cagattttat tatgtgaatt
    10561 tccttatgat gtaatgctgg ggaaagaaat tccataaact ccctaacaat gactggcatt
    10621 gctactacaa ttcctaacaa gactgcaata tagaattgag aaaaaaatgc ttgtcctggt
    10681 gcggtttgaa tcaattgtac cgagggaggg agaagttgat gtttcatgat tatagtaagt
    10741 tgagctgcaa tgttactgaa gggactaaac gttggatagt aaagatgaat accattgtaa
    10801 aaaaatggtg tcaaatgaaa tccaagaatg aaaaaggtaa caatgcctac agcaagtatc
    10861 atcttgaaca ctcgttttct tagctcctcc aagtgttcca tgaaggtcat ttccttggcc
    10921 atcagtagtc tagaatctag tcaaaaccat attaattctc tcttttggca aaagtatttt
    10981 tattttgaaa cgtgggtaag tcgagggatg agagcgattg gtctggtctc gacttggtgc
    11041 taaaaagccc cacagtttct aaatctcgta ggaatgtgca agagataaga taatgtcagt
    11101 atttttttgt aacagacaag caatctctag ttttggcttg ctattttcca ggtattggaa
    11161 gaatcttgct tgagggtaag ttactctgtt cttgttcagg agcactaaag ttttccaatt
    11221 ctacggttaa ttctgtgctg ccctcaaatg tatctccaag ttgcactgcc agatctgcaa
    11281 tctcttttgg ctggtatatc tctcttgaat tctttagaaa tatcctgcta cctttttccg
    11341 taggctcgcc accaaacttg tcctttagaa attttgttat acggtttacc tcttcttggg
    11401 taatctgatt gtgataaaag acaattccat ggattgatgc atagtcccac ggtgtaccgt
    11461 ttctgtaaca aaagactcca aaatgtgtcc ctttgtcatc cttggtacat tttatttccc
    11521 aaaccaacac cttttttgga tcatactgag ctttccttag atcttctaca gttaacttcc
    11581 aatatcgtaa tctcgtcatt tagtcaatca ataattattc gcttacaaaa atgtatctta
    11641 tcttaacgaa cataaagaaa tctcctaaag ggattaaaat aatgccaaaa gctataacga
    11701 gttactagtc agtaaattga aagtttttat aaacaaatca ttttatgaaa atatgctttt
    11761 tggagtcttt gcaattcata gtcctgaatc atgtccattg aacaacgcta aaagtaagaa
    11821 aatattccta gagattgaaa aaaagatgaa attaaattca aagaagttca acatcaccaa
    11881 ggtcattgct ttttacatgt ctgtgcttga acacgaatgg ataataatca tggatgctaa
    11941 aaacgcacat gatatagaac aactctgtat tgctgttgga atttcgtcca taagtacagt
    12001 caaaattgtt ccgataaacg actttagggt tgcattaaaa aaaatctcaa aaatgacttg
    12061 acctgagcat agaaattact cgtatttgaa aactgctaaa tattcgctca taaaattgtg
    12121 tgcatggaag ttgttcccat tgatcgtcta gaactcttag gggagatgga agagcgatat
    12181 aaacagaagg acaaggaata ctttgttcaa ctgttagatc ataacgattt tgtgattaga
    12241 tgcagggcag tttgtatact tgtggatatg ggtggagaag acgttgttcc acaagtggcc
    12301 aaggttttga aaaacgatcc taacgaatta gtgcgacatg aggcagcgtt ttctttgggg
    12361 cagatgtgtt tgcgaagtgg cataggtcca ctagaagatg caacccgtaa cgacccaagt
    12421 ctttttgtca gacatgaggc agcagttgcc ttgggcgtta taggctctca agatgcaaag
    12481 gaaactttac aaaaagccct tagggattca agtgaacagg taagagattc tgcagtagtc
    12541 gcactttcaa atctaaagtt tatggaaaag ttgagcaaaa atgaaaaatt tgccagactc
    12601 actggtggct agatggaagt aacttttgtt ccatcatgtc cagattcaaa actgtaaatg
    12661 gtatcaacgt ttgaattttc aaatatctcc gagtcatgag taattattac aaattgagat
    12721 attgtgtcta aattcgcttc aaatgcttgc gtcaagacat ttactaatga ctttcttctt
    12781 tcttggtcca agtgagtcgt tggttcatct aaaatgatga aaccaagatt tgatgagccc
    12841 atgagatgtg ccataccgaa tcttaatgcc agtgccaaac ttactttttc gccaccgcta
    12901 agagactcta agtcaagatg ggtatttcca gcataacaag taatgcctat gtctcttgcc
    12961 ttgtcttcta aaacaactct ttgaattttt acattaaatg taactagata ttctgaagct
    13021 ttttgagata tcatgttaag cgcccacgaa cgtaagcttg atgctacagg accatctctg
    13081 ttgtaaattt gattgcgtat tgtttcaagc tgggtgacat attgcctgac aatctgaagt
    13141 tcttccaatg tgtttgcaat tttttgctct tcttctcgaa atgactttat cttttgattt
    13201 attgctccaa gttcttggtc aagaatacta agggatctac gtttttgctc taacgttgtt
    13261 tttaactcct taaattccac cctgtcaaaa ttttgagttt cttcttgtaa tgatgatatt
    13321 gttttgatta gagaagagga atggtcatct attgcaaatt gcaaaaggtt ccctgatgcg
    13381 gtaatctcat gaggcacgtt ttctatattg gttctaaggg agaaaatttc ctcttttaat
    13441 tttaataaat cgttttcatc ctttacttta ttcaaattta gtgtgttttc tgccttgata
    13501 atttgtcgaa gcttactgtc taatgtcttg atcgagtcac tggttgtttt ctcactctta
    13561 ttccataaat ccatgctttt ttgaagattt tccagctctg ttcgaacgtg ttgttcttca
    13621 aagagagggc ttagatggtc tactttggaa tcacaaactg gacattttcc atctacaagc
    13681 ctcaattttt ctgcaatctc ttgctgtcca ttgagctttc ctatcttctc tgaagcatct
    13741 ctgatgtgca atctagtttt ctcaatctct tgctccaaag atttgatttg attctccgtt
    13801 tcagacttgg atgaaacaat ctgcaggcaa ctagtgcatt cctcaagttt tttctccttc
    13861 tcagagatct catttttgag ggaggatatt gcatttttta ggtagcctga caattcgttc
    13921 tttcttgatt ccagctcagt catcttaact tctttcgggg attgaaactc tattttttgt
    13981 tgtaatacaa tgaattcctc ttcttgattt tttttgccag cttccatttt tttcctctgt
    14041 ggttcaatga tgtcaatctc ttttttgata ttttcagatc tagttttgag aatctcaata
    14101 gatgtatcat catattctaa tcgtttttta actgactcac gaaaaacatc gatggatttt
    14161 ttcatcaact catatgctac atctaacctg tcaattccta ttattgcatt gacaagttcc
    14221 ttgaattttt ttgggtccgc atttatgatt gactgtaatt ccccctgttg taccaaagat
    14281 gcaaccttta gcttttgaaa atcaaggcca attagtgtct ctatggtctt ggtcattgat
    14341 tcgccaaact gttttctttc acctgcggcg atgggtttta gctccccatc agtctgttca
    14401 tatagttgtg cagaagtggt acccttggcg tctatttttc
//
LOCUS       DASPUS010000262         4246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Candidatus Bathyarchaeia archaeon isolate SMAG_U12309
            k141_1643039, whole genome shotgun sequence.
ACCESSION   DASPUS010000262 DASPUS010000000
VERSION     DASPUS010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37945225
            Sequence Read Archive: SRR7004340
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Candidatus Bathyarchaeia archaeon (soil metagenome)
  ORGANISM  Candidatus Bathyarchaeia archaeon
            Archaea; Candidatus Bathyarchaeota; Candidatus Bathyarchaeia.
REFERENCE   1  (bases 1 to 4246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4246)
  AUTHORS   Ma,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/09/2024 04:43:17
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,278
            CDSs (total)                      :: 1,250
            Genes (coding)                    :: 1,247
            CDSs (with protein)               :: 1,247
            Genes (RNA)                       :: 28
            rRNAs                             :: 1 (5S)
            complete rRNAs                    :: 1 (5S)
            tRNAs                             :: 27
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 3
            CDSs (without protein)            :: 3
            Pseudo Genes (ambiguous residues) :: 0 of 3
            Pseudo Genes (frameshifted)       :: 0 of 3
            Pseudo Genes (incomplete)         :: 2 of 3
            Pseudo Genes (internal stop)      :: 1 of 3
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4246
                     /organism="Candidatus Bathyarchaeia archaeon"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1643039"
                     /isolate="SMAG_U12309"
                     /isolation_source="soil"
                     /db_xref="taxon:3045160"
                     /environmental_sample
                     /country="Colombia"
                     /lat_lon="3.8381 N 73.3194 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..1160)
                     /locus_tag="VEJ68_06380"
     CDS             complement(45..1160)
                     /locus_tag="VEJ68_06380"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019177754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HXX06429.1"
                     /translation="MSAEDFTVTPWSVEGTVDYDKLIQKFGTEKISPELQTRIEKITG
                     EVHPMLKLNYFFSHRDFDKILSEYEKGNKFYLYTGRGPSGPIHMGHLLPWIFTKYLQE
                     KFDVNLIFQVTDDEKFLYSDDKSLQDVSKYTAENILDIIAIGFDPKKTKILIDTKDIK
                     RIYPISLEIAKRITFSTVKAVFGFQNSTNIGMIGFPPTQAAPCFLPSVIEGKPTPVLI
                     PAAIDQDPYWRVTRDIAEKLGYPKPAQIHSKFLPGLGMQGKMSSSVPDTAIFTTDNDQ
                     AIDKKISNTFTGGQPTVDLQRKLGANFSICPVFWYLRYFFDTEKESDERARKCKGGEL
                     LCGECKCNLKDETKPFIVDFKKRRDKAKDQVNKFLFD"
     gene            1213..2640
                     /locus_tag="VEJ68_06385"
     CDS             1213..2640
                     /locus_tag="VEJ68_06385"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007402957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HXX06430.1"
                     /translation="MSQVLHPIEHKIIKSLQEQQNLTPDDLSQKTELSIDQVRRGIEW
                     LKFKDFIQVNESEKNFVALGKRGRDAHERGLPERQLVNYLRSVFGFSCDFNEAKNQLK
                     NEFSAAIANAKKNHWIEINENRIMLKGYHDTTPEERVIKFIASKSSAVLLDEIDDKNV
                     LDLLKKRPDFLIFTSQKLVTVNLTEKGIDASKSASQITDGDMTRAIDVEASAPVIYAA
                     KSHPLQDVIDEVREIFVSLGFAELVGNCTQSSFWNFDALFIPQDHPAREMQDTFYLKD
                     LKASNIATADQIKKVSTAHKNIWRYDWKLDEAKRMVLRTHTTCVTIKALADNKYDEAR
                     LFSIGRVFRNEKVSYKHLVEFNQVEGVVVGKNVTLRDLMGLQMEFYKKMGIKKAKFWP
                     TFFPYTEPSLQSMIYNERLGKWVELFGMGIFRPEVTKPLGIKNPVLAWGGGIERIAML
                     KFSLDDVRELYHNKLSWLRSVPKCQ"
     gene            2631..>4246
                     /gene="pheT"
                     /locus_tag="VEJ68_06390"
     CDS             2631..>4246
                     /gene="pheT"
                     /locus_tag="VEJ68_06390"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014963856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HXX06431.1"
                     /translation="MPVVTLYFDRIAKILGRKIPRDKVLSTIPFLGLDIEEETQDHVN
                     IEYSPNRPDFSTDYGIIVGLQGLLGIKTGTPKLVIKKGKSAIKVNPSVGKVRPFITAI
                     EARNGKLDDETIRQIITMQEDLHNGIGRRRKKASIGIHDLDKIRYPLVYNTATRTHKF
                     VPLNSSESMTISDILEKTETGRAYQHLLTSSRVPIIVDSTGNTISFPPIINSKLTEVS
                     ANSKNLLVEITATDKNTAEDALAIISYTLQSVGFDLYSVKISGARNSTPNFTSKSMLL
                     EPSFVNATLGLDLSQSEMVKSLRKSRLDAKIKGKNILCTIPRFRTDIFGPIDLVEEIA
                     LGYGIQNLEPTVPQSVSTGQKNKQTILLQAASDIMIGLGYSEVMNFGLGGKSVQYDLT
                     GRDGSKMISVTDSKSQEHHILRDTLLPGMIDTLSRNIHEPYPQKIFEIGTVFDAGNPV
                     NEAIHLGCLSAHNNANYTEIQSILQSFLKAGFNVSSATKTGEDALFTLGRTASVLVNG
                     NRIGTVGEISSKIIDNFKLRIPVAGFEITLS"
BASE COUNT         1414 a          758 c          839 g         1235 t
ORIGIN      
        1 cttcataatt atcatcacaa attatttttt tcttcatccc aaaattaatc aaagagaaac
       61 ttgttaacct ggtcttttgc cttatctctt ctctttttga agtcaactat gaatggtttt
      121 gtttcatcct ttagattaca cttacattct ccacaaagaa gttctcctcc cttgcatttc
      181 cttgctcttt cgtctgattc tttttctgtg tcaaaaaagt atcttagata ccaaaataca
      241 ggacaaatgc taaagtttgc cccaagtttt cgttgaaggt caactgttgg ctgaccgcca
      301 gtaaaagtgt tagaaatctt tttgtctatt gcttgatcat tatcagtagt aaaaatggca
      361 gtatcgggaa cagatgaaga catctttccc tgcatgccaa gaccaggcaa gaatttagaa
      421 tgaatctgag ctggctttgg atatcctagc ttttctgcaa tgtctctagt tactctccaa
      481 tatgggtctt gatctatggc agcaggtatg agaacaggtg ttggttttcc ctcaattact
      541 gaaggaagaa aacatggggc agcctgtgtt ggaggaaatc ctatcatgcc aatgtttgta
      601 gaattttgaa aaccaaaaac tgctttcacc gttgaaaatg ttattctctt ggctatctcc
      661 aatgaaattg gataaattcg cttgatgtct tttgtatcta ttagaatttt tgtctttttt
      721 gggtcaaaac caatggcgat aatatcaagg atgttttcag cagtatactt tgatacatct
      781 tgtagggatt tatcatcgct atacagaaac ttttcatcat ctgtaacttg gaagattaaa
      841 ttaacatcaa atttttcttg cagatattta gtaaatatcc atggaagcaa atgccccatg
      901 tgaataggtc cagatggtcc tcggcctgta tatagataga atttgtttcc cttttcatat
      961 tctgacaaaa ttttatcaaa atctctgtgg ctaaaaaaat agtttaattt gagcatagga
     1021 tgcacttcgc cagttatttt ttctatgcgt gtctgtagct ctggagaaat tttttcagtt
     1081 ccaaattttt gaataagctt gtcgtaatct acagtgcctt ctacactcca aggcgttact
     1141 gtaaaatcct cggccgacat tcatgtttca gttaggttaa ggtttaaaaa gtctttatgg
     1201 ttggttgtgg taatgtcaca agttctgcat ccgatagaac acaagatcat caaatcattg
     1261 caggaacaac agaacttgac accagatgat ctatcacaga aaactgaatt gtcgatagat
     1321 caggtgagac gtggtattga atggctcaaa tttaaagact ttattcaggt aaatgaatca
     1381 gaaaaaaact ttgttgcact tggaaaacga ggccgtgatg cacacgagag aggattgcca
     1441 gagcgacagc ttgttaatta tcttagatca gtatttggtt ttagttgcga ttttaatgaa
     1501 gcaaaaaatc aactaaaaaa cgaatttagt gcagctattg caaatgcaaa gaaaaatcat
     1561 tggatagaaa ttaatgaaaa cagaatcatg cttaaaggat accacgatac aactccagag
     1621 gaacgagtaa tcaaattcat cgcatcaaaa agttcagcag ttctattaga tgaaatagat
     1681 gataaaaatg tccttgattt gctgaaaaaa agaccagatt ttctcatctt tacttcacaa
     1741 aaacttgtta cagtaaatct cactgaaaaa ggaattgatg cttccaaaag tgcaagccaa
     1801 ataacagacg gtgatatgac acgagcaatt gatgttgaag cctcagctcc cgtaatttat
     1861 gctgcaaaaa gccatccact tcaggatgta atagatgagg tgcgtgagat atttgttagc
     1921 ttagggtttg cagaattggt tggaaactgt actcaatcaa gtttttggaa ctttgatgct
     1981 cttttcattc cacaagatca cccagcacga gaaatgcaag acacatttta cttgaaagat
     2041 ttgaaagcat ctaatatagc tacagctgat cagataaaga aagtttctac tgctcacaaa
     2101 aacatatggc gttatgattg gaagcttgat gaggcaaaaa gaatggtctt gagaactcat
     2161 accacatgtg ttaccatcaa ggcacttgcg gataacaaat acgatgaagc ccgattgttc
     2221 tcaattggga gggtatttag aaatgaaaaa gtcagctaca aacatcttgt agagtttaat
     2281 caagtagaag gagttgtagt gggtaaaaat gtaacattaa gagatctgat ggggcttcaa
     2341 atggaatttt ataaaaagat gggaataaaa aaagcaaagt tctggcctac atttttccca
     2401 tatactgaac catcgcttca atcaatgata tacaacgaaa ggcttggcaa atgggtggaa
     2461 ctgtttggta tgggaatctt cagaccagaa gttacaaaac cactcggaat aaaaaatcca
     2521 gtacttgcat ggggaggagg aatagaaaga atagccatgc taaagtttag tctagatgat
     2581 gttcgcgaac tataccacaa caaactaagt tggcttagga gcgtaccaaa atgccagtag
     2641 taacattata ctttgacaga atagcaaaga ttctaggtcg caagatcccg cgggacaaag
     2701 ttctttctac aataccattt ctgggattag atattgaaga ggagacacaa gaccatgtaa
     2761 acatagaata cagcccaaac agacctgatt tttctaccga ttatggtata attgtaggct
     2821 tgcaaggact gcttggaata aagactggca cgccaaagct tgtgattaag aaaggaaaat
     2881 ctgcaataaa ggtaaaccca tctgttggca aggtccgacc ttttatcacc gcaattgagg
     2941 cacgaaacgg aaaactagac gacgaaacga ttcgacagat tataacaatg caggaggacc
     3001 tccataatgg tataggcaga agaaggaaaa aggcctctat aggaattcat gatcttgata
     3061 agatccgcta tcctctggtg tataacactg caacaagaac ccacaagttt gttccattga
     3121 attcttctga aagcatgaca atatctgaca tacttgaaaa aactgagact ggacgagcat
     3181 atcaacatct gcttacaagc tcacgagtgc caattattgt agactctacg ggaaatacaa
     3241 tttcttttcc acccataata aattcaaagc tcactgaagt aagcgctaat agtaaaaatc
     3301 ttttagtgga aattactgca actgacaaaa acaccgcaga agatgcgctt gctataatat
     3361 catacacttt gcaaagtgta ggctttgatt tgtattctgt caagatatct ggagcaagaa
     3421 attctacgcc aaactttaca agcaaaagta tgctgctaga gccgtcattt gttaatgcaa
     3481 cactcggact tgatcttagc caatctgaaa tggttaaatc actgagaaag agcaggcttg
     3541 atgccaagat aaaagggaaa aatattttgt gtacaattcc aaggtttaga acagacatct
     3601 ttggtccaat tgatctagtt gaggagatag ctctaggtta cggaatacaa aatctagagc
     3661 ccacagttcc acaatctgtt tctactgggc aaaaaaacaa acaaacaatt ctgttgcaag
     3721 ctgcaagcga tatcatgata ggactaggtt actctgaagt aatgaatttt ggactgggtg
     3781 gaaaatctgt tcagtatgat ttaacggggc gggatggttc caaaatgata tcggtaactg
     3841 attcaaagag ccaggaacac catattctac gcgatactct acttcctgga atgattgata
     3901 ctttatcaag aaacatacat gagccttatc cacagaagat ctttgagata ggaaccgtat
     3961 ttgatgctgg caatcctgtt aacgaagcga ttcatcttgg ttgcctgagt gcacacaaca
     4021 atgcaaacta tacggagata caatctattc tgcaatcttt tctcaaggct ggattcaatg
     4081 tatccagtgc aacaaaaact ggtgaggatg ctttgtttac tttgggaagg acagcaagcg
     4141 ttctggttaa cggaaacagg attggaacgg taggagagat atcatccaag ataattgata
     4201 attttaagct gagaattcct gtggcaggat ttgagataac actttc
//
